| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,590,915 | A→G | 100% | pseudogene (879/1227 nt) | Y75_RS07940 ← | fimbrial biogenesis outer membrane usher protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 1,590,915 | 0 | A | G | 98.5% | 450.9 / ‑3.9 | 134 | pseudogene (879/1227 nt) | Y75_RS07940 | fimbrial biogenesis outer membrane usher protein |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (73/58); total (74/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.21e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 134 total aligned reads displayed.
ACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACTCATTCCGTAATAAATCTGGCTGCTGTCACCAC > NC_007779/1590686‑1591144 | aCTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTa > 1:759199/1‑239 (MQ=255) tgGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAaga > 1:1039699/1‑238 (MQ=255) ggAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGc > 2:1004423/1‑239 (MQ=255) ttcatgTCACATAACCCTGCCCATTTTCGGGGAAAATGCTCACATTTTTATCCTCTCCGTGGGTGAAAATGGCACCGAATGGAC‑CGTTGTTATTACCTTTTTTCAACGTCA‑TTAATACTTC‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAaca < 2:569281/234‑1 (MQ=255) tCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAacac > 1:56509/1‑239 (MQ=255) tCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAacac > 1:582976/1‑239 (MQ=255) tCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAacac > 2:430354/1‑239 (MQ=255) tgTCAAATAAACCTGACTATTTCCCGCGACAATGCTCCCATTTTTATTTTCTCCGGATGGTACAATTGCACCGAAGTAAT‑CCTTTTTATTACCGTACTTCAACGTCA‑TTAATCCTTC‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGt < 1:1049761/238‑1 (MQ=255) caaaaTAAACTTGACCATTTTCCTCGAAAATGCTGCTATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGTTTTTATTACCGTATTTCAACGTTA‑TTAATTCTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGtt < 2:1660926/234‑1 (MQ=255) cAGATACACCAGACCTTTTCCCGCGAAAATGCTTCCTTTTTTTTTTCTTCGGTTTTGGACAATTGCACCGAATGGAC‑CGTTTTTATTACCGTACTTCAACGTCA‑TTAATACTTC‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGtttt < 2:522842/239‑1 (MQ=255) cAGATAACCCTGACCATTTTCCGCGAAAATGCTCCCATTTTTATTCTCTCCGTGTGTAACAATTGCACCGAAGGGAA‑CGCTTTTATTCCCGTCCTTCAACGTCA‑TTAATTCTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGttt < 1:806333/238‑1 (MQ=255) cAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCACCGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGttt < 1:77584/238‑1 (MQ=255) aaaaTAAACCGTACAATTTTCCGCAACATGCCTCCTTTTTTTATTCTCTCCGTGTGTCAAATTTCCACCGAATGGAC‑CGCTTTTATTACCGTACTTAACCTTCA‑TTATTTCTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGtttt < 2:122279/236‑1 (MQ=255) tAACCCTTACCTTTTCCCGCGACAATGCTCCCATTTTTATTCTCTCCGTGTGTGAAAATTGCACCGATTGAAA‑CGCTCTTTTTCCCGTACTTAAACTTCA‑TTAATCTTTC‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTtct < 1:1359159/237‑1 (MQ=255) ccTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTatat > 1:1782248/1‑239 (MQ=255) aCCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTatat > 2:563186/1‑235 (MQ=255) aCCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTatat > 2:579790/1‑235 (MQ=255) ccATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTatat > 1:1491122/1‑234 (MQ=255) tttCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCCCCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCa < 1:983496/239‑1 (MQ=255) tttCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTc > 1:1815235/1‑232 (MQ=255) cccGCGACAATGCTGCCATTTTTTTTCTCCCCGTGTGGGAAAATTGCCCCGAATGAAC‑CGCTTTTATTCCCGTACTTCAACGTCA‑TTAATCTTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCaaa < 1:1749603/238‑1 (MQ=255) aaatctgtcttttttttTGCTCTCCGTGTGTAACACTTGACCCGAATGAAC‑CGTTTTTTTTACGTTACTATACCGTAA‑TTAATCCTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTaa < 2:1782248/227‑1 (MQ=255) ctcccttttttATTCCCTCCGTTGGTGA‑AAATGCCCTCGATGGAACCGCTTTTATACCCGTGTTTAAGCGAAT‑TTACTTCTTC‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGc < 2:1869727/233‑1 (MQ=255) tcCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCgg > 2:41680/1‑239 (MQ=255) gtgtgACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAaca > 2:755287/1‑179 (MQ=255) tgACAATTGCACCGAATGGAA‑CGCTCTTATTACCGCACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAAt > 2:332618/1‑238 (MQ=255) ttGCCCCGAAGGCAC‑CGCTTTTTTTCCCGTACTTAACCGTCA‑TTAATCTTTC‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTc < 1:845839/239‑1 (MQ=255) ttGCACCGAATGAAA‑CG‑TTTTTTTACCGTTACTCAACCTTATTTACTCTTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTc < 1:1518538/239‑1 (MQ=255) aaTGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTtc > 2:837976/1‑237 (MQ=255) aaTGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTtc > 1:1225235/1‑237 (MQ=255) aaTGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTtc > 1:1820381/1‑237 (MQ=255) aa‑CGTTTTTATTACCTTATTTCACCTTCT‑TTAATCCTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTAtt < 1:1554905/238‑1 (MQ=255) accgttctTTTTACCGTACTTCAACTTAA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTAtt < 1:1234064/233‑1 (MQ=255) cttttattgCGGTACATCAAAGTAA‑ATAATTCTTC‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGAc < 2:1776597/236‑1 (MQ=255) ttttattaCCGTACTTCAACGTCA‑TTAATCCTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAaca < 1:1622974/150‑1 (MQ=255) tctTATTACCGTACTTCAAGGTCA‑TTAATACTTC‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGAc < 1:718927/238‑1 (MQ=255) tctTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAaca > 2:1622974/1‑152 (MQ=255) tctTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACa > 2:59779/1‑239 (MQ=255) tattattaCCGTACTTCAACGTTA‑TTATTACTTT‑CCCGCCGATTTGAGCACGAAATGTTGCTCTCACAATACCACCGAGAGTTGGGATGACAGTGACCACGGTTTCATCTAGTTCAAAATTATCAGCAAGGGAGTGCGCGTTAACAGCAACACGGTTTTCTCTATATTCCGTCGCAAATGGAAATATGGAATAGCCACGCCAGTCGGAATGAATTCAGGTCTGGTTCTCAATCTTGACa > 2:298907/3‑239 (MQ=255) attaCCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCa > 1:112470/1‑198 (MQ=255) aCCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCa > 1:884961/1‑238 (MQ=255) gTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATTTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCa > 1:44783/1‑238 (MQ=255) gTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGTGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCa > 2:1134121/1‑238 (MQ=255) gTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATCTGGCATAGCCACGCAATTCGGAATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCa > 2:124060/1‑238 (MQ=255) gTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCa > 1:1724373/1‑238 (MQ=255) gTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCa > 1:1653647/1‑238 (MQ=255) gTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCa > 1:463001/1‑238 (MQ=255) tttCAACGTAA‑TAAATCTTGT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAg < 1:332538/238‑1 (MQ=255) ttctaaCTTCA‑TAAATCCTTA‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAg < 1:869523/235‑1 (MQ=255) cTTCAACGTCA‑TAAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAg < 1:1694081/239‑1 (MQ=255) ttcaaactaaatAATTCTTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAg < 2:1508427/228‑1 (MQ=255) acttCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGcc < 1:332618/236‑1 (MQ=255) aCGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGcc < 1:49028/239‑1 (MQ=255) cGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCt > 1:713305/1‑239 (MQ=255) cGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCt > 2:1146574/1‑239 (MQ=255) a‑TTAATTCTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAAc < 1:1733188/239‑1 (MQ=255) ttAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAAcc > 2:967687/1‑239 (MQ=255) aatctttccccGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAg < 2:1653647/231‑1 (MQ=255) tt‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCAt > 1:518091/1‑239 (MQ=255) tt‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCAt > 2:300922/1‑239 (MQ=255) t‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCAtt > 2:657457/1‑239 (MQ=255) t‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCAtt > 1:254637/1‑239 (MQ=255) gATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCg > 1:744435/1‑238 (MQ=255) gCATTAAATGTTGCTCTGGCAATAGCACCTTGAGTTGGGATGACAGTGACCACAGTTTCATCCAGTTCAACATTATCTGCAAGGTAGTTCGCGTTAAGAGAAGCACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGACAGTCGGTATGAATTCCGGTCTGGTTCTCTATCTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCgg < 2:606676/239‑1 (MQ=255) gCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGGGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCgg < 1:1004423/239‑1 (MQ=255) gCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCgg < 1:366660/239‑1 (MQ=255) gCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCgg < 1:1146574/239‑1 (MQ=255) gCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCgg < 1:820399/239‑1 (MQ=255) cATTAAATGTTGCTCTGGCAATGGAACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGGGTTCGCGTTAAGAGCAACACGGTTTTCGCTATATTCTGTCGCAAATGGTAATATGGCATAGCCTCGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGGCCAGCgg < 2:170160/238‑1 (MQ=255) ctGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTAAATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGGCGGTATGAATTCCGGTCTGGTTCTCTATTTGGACATTATCAGCTCCAGGAGCCTTAACCAGAGCCATTGGGTCGCCCAGCGGCTGTCCAAAGGTGAt < 2:814344/239‑1 (MQ=255) tGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGAt > 2:793929/1‑238 (MQ=255) gCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGcc > 2:570816/1‑239 (MQ=255) aaTAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCAt < 2:744435/239‑1 (MQ=255) aCCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCAt < 1:563186/239‑1 (MQ=255) aCCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCAt < 2:884961/239‑1 (MQ=255) cGTGGGTTGGGATGACAGTGACCACGGGTTCAAACAGTTCAACATTATCTGCAAGGGAGTTCGCGTTGAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGACACGACAGTCGGTATGAATTCCGGTCTGGTTCTCGATTTTGACATTATCAGCACCAGGAGCCTTAACAAGAACCATGGTGTCGCCTAGCGGTTGTCAAAAGGTGACGCAATCAGCATg > 2:1757418/1‑238 (MQ=255) cGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAGGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCAACCCAGCCGGTATGAATTCCGGTCTGGTTCTCTATTTTGCCATTATCATCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAAGCGATGCCCTCTGCCTGa > 2:1494133/1‑239 (MQ=255) cGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGa > 1:789534/1‑239 (MQ=255) cGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGa > 1:143501/1‑239 (MQ=255) tGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGc > 1:1477116/1‑239 (MQ=255) tGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGc < 2:1115443/118‑1 (MQ=255) tGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCaataa < 1:648769/239‑1 (MQ=255) tGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCaataa > 2:608992/1‑239 (MQ=255) tGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCaat < 1:211551/237‑1 (MQ=255) gATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATc < 2:1477116/238‑1 (MQ=255) gACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCcca > 2:1153601/1‑238 (MQ=255) gACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACt < 2:1820381/237‑1 (MQ=255) aCCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACTCAt > 1:1460689/1‑239 (MQ=255) aCCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACTCAt > 2:1933382/1‑239 (MQ=255) aCCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGGGATGCCATCAGCATGAGCAATAATCCCACCACTCAt > 2:1694837/1‑239 (MQ=255) cACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACTCATTc < 1:657457/239‑1 (MQ=255) ggTTTCATCCAGTTCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATg < 1:1587660/213‑1 (MQ=255) ttCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGAc < 1:1165866/126‑1 (MQ=255) ttCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACTCATTCCGTAATAAATCTg > 1:1223261/1‑237 (MQ=255) ttCAACATTATCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTAGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGCGTCGCCCAGCGGATGTCCAACAGTGATGCCATCAGCATGAGCAATAATCCACCCACTCATTCCGTAATAAATCTgg > 2:1684120/1‑238 (MQ=255) cAACATTACCTGCAAGGGAGTTCGCGTTACGAGCAACACGGTTTTCTCTACATTCTGTCGCAAATGGCAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACTCATTCCGTAATAAATCTGgct > 2:1852600/1‑238 (MQ=255) ttATATGCAAGGGAGTTTGCGTTAAGATAAACACGTTTTTCTCTATATTCATTCGCAAATGGTAATATGGCATAGCCACGCCAGTCTGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGGCCAGCGGCTGTCCAAAGGTGATGACATCAGCATGAGCAATAATCCCACCACTCATTCCGTAATAAATCTGGCTGCTGTc < 2:1225235/239‑1 (MQ=255) tCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACTCATTCCGTAATAAATCTGGCTGCTGTcacc > 1:261829/1‑239 (MQ=255) tCTGCAAGGGAGTTCGCGTTAAGAGCAACACGGTTCTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACTCATTCCGTAATAAATCTGGCTGCTGTcacc > 2:362555/1‑239 (MQ=255) gCAAGGGAGTTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACTCATTCCGTAATAAATCTGGCTGCTGTcaccac > 1:1602856/1‑238 (MQ=255) | ACTGTGGAAGTCCAGTCAGATAAACCTGACCATTTTCCGCGACAATGCTGCCATTTTTATTCTCTCCGTGTGTGACAATTGCACCGAATGGAA‑CGCTCTTATTACCGTACTTCAACGTCA‑TTAATACTTT‑CCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTTCTCTATATTCTGTCGCAAATGGTAATATGGCATAGCCACGCCAGTCGGTATGAATTCCGGTCTGGTTCTCTATTTTGACATTATCAGCACCAGGAGCCTTAACCAGAACCATTGTGTCGCCCAGCGGCTGTCCAAAGGTGATGCCATCAGCATGAGCAATAATCCCACCACTCATTCCGTAATAAATCTGGCTGCTGTCACCAC > NC_007779/1590686‑1591144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |