Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	2,383,659	T→C	11.6%	I91V (ATT→GTT)	menD ←	2‑succinyl‑5‑enolpyruvyl‑6‑hydroxy‑3‑ cyclohexene‑1‑carboxylic‑acid synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	2,383,659	0	T	C	11.6%	159.2 / 2.4	93	I91V (ATT→GTT)	menD	2‑succinyl‑5‑enolpyruvyl‑6‑hydroxy‑3‑ cyclohexene‑1‑carboxylic‑acid synthase
Reads supporting (aligned to +/- strand):  ref base T (31/44);  new base C (2/9);  total (37/56)
Fisher's exact test for biased strand distribution p-value = 1.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAATGCTTCCAGAATGACCG  >  NC_007779/2383421‑2383895                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                aaCGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAAt                                                                                                                                                                                                                                                 <  1:62401/239‑1 (MQ=255) aaCGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAAt                                                                                                                                                                                                                                                 <  2:139170/239‑1 (MQ=255) aaCGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAAt                                                                                                                                                                                                                                                 <  1:1052804/239‑1 (MQ=255)   caggCAGTTGATATGGACTCCCCCCGCATTATGCGTACCGATAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATAGCCTTGGTCGGGCTCGGCAATGAAATGCTGTGCGT‑GGGGTGAGAGGCGAACATTCCCTGCTGGCGAATTGCGTGAT‑TCGCGCCGCAGTCAATTAGCCCCGGCGGGCGAGCGGC‑GGTTAAGAA‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAGCCC‑GTCTCCAGTCa                                                                                                                                                                                                                                               <  2:370194/237‑1 (MQ=255)    gggCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGGTAAGAG‑AAA‑T‑A‑G‑TTTTTCT‑TCGGGTAAACC‑GGCTTCGATCAg                                                                                                                                                                                                                                              >  1:1573103/1‑239 (MQ=255)       cAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCGATCAGTg                                                                                                                                                                                                                                            <  1:784895/238‑1 (MQ=255)       cAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTg                                                                                                                                                                                                                                            <  1:721302/238‑1 (MQ=255)       cAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTg                                                                                                                                                                                                                                            <  2:912958/238‑1 (MQ=255)       acgTTGATAGGGACTTCCCCCGCATGAAGCGTAACGAGAGCGTGGTCGAGGGTAGAAGCCAGCCACCGTGCGGGGGTATCCTGGGGCGGGCGCGGCAATGAAATACTGTGCGT‑TGGGTGAGAGGCGAACATTCCCGGCGGGCGAAGTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAA‑C‑A‑G‑TTTTTCG‑CCGGTTAACCC‑GGCTTCAAGCAGTg                                                                                                                                                                                                                                            <  2:311573/236‑1 (MQ=255)          ttGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAAt                                                                                                                                                                                                                                                 <  1:1834901/230‑1 (MQ=255)                tGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTTAGAG‑AAT‑C‑A‑G‑GTTTTTT‑CCCGGTTACCC‑CGCCTCAATCAGTGGCCGAT‑a‑aag                                                                                                                                                                                                                                >  1:533164/1‑239 (MQ=255)                    cTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGGG‑AAA‑C‑C‑G‑GTTTTTT‑TTCGTTAAACC‑CGCGTCAATCAGTGCCGGGT‑A‑AAGAttt                                                                                                                                                                                                                            >  1:615213/1‑239 (MQ=255)                    cTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTTT‑CCGGTTAACCC‑GGCCTCAATCAGTGCCGGAT‑A‑GAGAatt                                                                                                                                                                                                                            >  1:509330/1‑239 (MQ=255)                    cTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGGTTAGGG‑AAA‑C‑A‑G‑TTTTTTTCCCGGTTAACCC‑GCCTCCAA‑CAGTGCCGGGA‑A‑GAGAttt                                                                                                                                                                                                                            >  1:687222/1‑239 (MQ=255)                    cTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGATTAGAG‑GAT‑C‑AGG‑TTTTTTT‑CCGG‑TAACTC‑CGCGTCAACAAGAGCCGGAT‑A‑GAGAatt                                                                                                                                                                                                                            >  1:1467245/1‑239 (MQ=255)                       cccccGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGCGGGTTAAGGA‑GAC‑C‑A‑G‑TTTTTTT‑CGGGTGACCCC‑GG‑TTCTACCACTGCCGGGA‑A‑GAGAATTgt                                                                                                                                                                                                                          >  2:739685/1‑237 (MQ=255)                       cccccGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTTT‑CCGGGTTACCC‑CGCTTCAATCAGGGCCGGGT‑A‑AAGAttttc                                                                                                                                                                                                                          >  1:1552083/1‑236 (MQ=255)                       cccccGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAAt                                                                                                                                                                                                                                                 <  1:99457/217‑1 (MQ=255)                       cccccGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGGTAAAAG‑AATCC‑G‑G‑TTTTTTT‑CCGGTT‑ACCC‑CGCCTCAATCAGCGCCGGAT‑A‑GTGAttttc                                                                                                                                                                                                                          >  1:459183/1‑236 (MQ=255)                         cccGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑A‑A‑G‑TTTTTTT‑CCCGGTAACCC‑CGCCTCCATCAGTGCCGGAT‑A‑GAGATTTGTCa                                                                                                                                                                                                                        >  1:591522/1‑238 (MQ=255)                            gCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGGTAAGAG‑AAT‑C‑A‑G‑GTTTTTT‑CCCGGTAAACC‑CGCCTCAATCCATGCCGGAT‑A‑GAGAATTTTCAccc                                                                                                                                                                                                                     >  1:1564889/1‑237 (MQ=255)                             cATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑G‑A‑G‑GTTTTCT‑CCCGGTTACCC‑CGCTTCAATCAGTGCCGGAG‑A‑GAGAGTTGGCAcaccc                                                                                                                                                                                                                   >  1:533091/1‑235 (MQ=255)                                        ccGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGt                                                                                                                                                                                                        <  1:470321/239‑1 (MQ=255)                                           agagCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGGTAAGAG‑GAA‑C‑AGG‑TTTTTTT‑CCGG‑TAACCC‑CGCCTCAATTAAGGGCGGGG‑A‑GAGATTTGCCCCCCCCCGGCCGGGGGGcac                                                                                                                                                                                                     >  1:1670365/1‑239 (MQ=255)                                                        tGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGc                                                                                                                                                                                                                          <  1:1929314/205‑1 (MQ=255)                                                          gTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCg                                                                                                                                                                                       <  1:1000500/238‑1 (MQ=255)                                                           tAGAAGCCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑GCGCTCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCGCCGCCGTGCCGGAGGTCACAATCACCGCCACCgg                                                                                                                                                                                      <  1:424859/238‑1 (MQ=255)                                                            ggAAACCAGCCAAGGGGGGGGGATATCGTGCGGGGGGCGGGGCAAGAAACTCGTGTGGGG‑GGGGTGAGAGGCGAACATCCCCGGCGGGCGAATTGCTTGTT‑TGGGGCCGCAGTCATTTAGCTCCGGCGGGCGATGGGC‑GGTAAAGAG‑ATT‑C‑G‑T‑TTTTCCC‑CCGGTTACCCG‑GGTTTCAATCATGGCGGGAA‑G‑GAGATTCCCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGgc                                                                                                                                                                                     <  2:98664/237‑1 (MQ=255)                                                                  cAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGGTAAGGG‑GAA‑C‑C‑A‑TTTTTTT‑CCCGTGTACCC‑GGGTTCCATCCATGTCGGGG‑T‑GAGATTTTCTCCCCCCGCGCCCGGGGGCACACACACCCCCCCCCgccgtctt                                                                                                                                                                               >  2:1018835/1‑232 (MQ=255)                                                                                   tatCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGccc                                                                                                                                                             <  1:891771/238‑1 (MQ=255)                                                                                      ccTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑GAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGAATTGCCACCGCCCTGCCGGAGGGCACAATCACCGCCACCGGCTG‑CTTGCTTACTTTCGCCCGcccccg                                                                                                                                                          >  1:1067455/1‑236 (MQ=255)                                                                                      ccTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGGTTAGAG‑AAT‑C‑A‑G‑TTTTTTT‑CCCGTTAAACC‑GGCTTCAATCAGTGCCGGGT‑A‑GAGATTTTCCACCCCCGTGCCGGAGGGCACAATCACCCCCACCCGCCG‑CCTGCTGACTTTTCCCACcccccc                                                                                                                                                          >  1:1302150/1‑236 (MQ=255)                                                                                            tCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAg                                                                                                                                                    <  1:1867304/238‑1 (MQ=255)                                                                                             cgtgcgcGGAAAGGAAATACGGTGCGT‑GGGGTGCGTGGGAAACATACCCGCCGGGCAAATTCCCTGTT‑CCGCACCGTATTAATTGCCCCCCGGCGGGCGATGGGA‑GGTTAAGAG‑AA‑‑C‑A‑A‑GTTTTCC‑CCGGTTTACCCGGGCTTCAAAC‑CTCCCCGATAA‑GGGATTGCCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGa                                                                                                                                                   <  2:1074235/235‑1 (MQ=255)                                                                                               ggCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTTAGAG‑AAT‑C‑A‑G‑TTTTTTT‑CCCGGTTACCC‑GGCTTCCATCAGTGCCGGAT‑A‑GAGAATTTCCACCCCCCTGCCGGAGGTCACAATCACCGCCACCCGCTG‑CCTGCTGGCTTTCGCCCGCCCCCGCGCCCGaag                                                                                                                                                 >  1:1358127/1‑236 (MQ=255)                                                                                               ggCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTTAGAG‑AAT‑C‑A‑G‑TTTTTTT‑CCCGGTAACCC‑CGCTTCAAACAATGCCGGAT‑A‑GAGATTTTTCCCCGCCGTGCCGGGGGGCACAAACACCCCCACCCGCCG‑CTTTCTGACTTTTGCCCGCCCCCGCGCCCGATg                                                                                                                                                 >  1:1747321/1‑238 (MQ=255)                                                                                               ggCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGGTTCGAG‑GAT‑CAA‑G‑TTTTTTT‑CCGTTTAACCC‑GCCTCCATTCGGCGCCGG‑T‑C‑AAGATTTTGCACCCCCCGGCCCGGGAGCGCCATCACCGCCCCCGGCTC‑CCTTCTGACCTTCCCCCGCCCCacccaccgccg                                                                                                                                                 >  2:157942/1‑228 (MQ=255)                                                                                                gcgcGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGTT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTTAGAG‑AAT‑C‑A‑G‑GTTTTTT‑CCGGGTAACCC‑CGCCTCAAACAGTGCCGGGT‑A‑GAGATTTTCCACCCCCCTGCCGGAGGGCACAAACACCGCCACCCGCTG‑CCTGCTGACTTTTTCCAGCCCCCCCGCCCGATGc                                                                                                                                                >  1:1252353/1‑238 (MQ=255)                                                                                                 cggggCAAGGAAATCCTGTGGGT‑GGGGTGAGAGGCGAACTTCCCCGGCTGGGGAATTGCCTGAT‑TCGCGCCGCATTCAATTGGCTCCGGCGGGCGTTCGGC‑GGTTAAGAG‑AAT‑C‑A‑T‑TTTTTCT‑CCGGTTACCCC‑GGCTTCAACCAGGGCCGGAT‑A‑GAGTTTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGcc                                                                                                                                               <  2:1154504/235‑1 (MQ=255)                                                                                                  gcgggcattgaaTACTGTGGGTGGGGGGGAGAGGCGAACTTCCCGGGGTGGCGAATTCCTTGTT‑CCGCGCCGCAGTAAATTCGCTCGGGGGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCC‑CCGGTTACCCC‑GGCTCCAACCAGTGCCGGAT‑A‑GAGTTTCGCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGcc                                                                                                                                               <  2:46132/228‑1 (MQ=255)                                                                                                  gcgGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGccc                                                                                                                                              <  1:573328/238‑1 (MQ=255)                                                                                                          gAAGTACTGTGGGG‑GGGGGGGGGGCGGACCATCCCCGGGTGGGGATTTGCTTTGT‑CCGCGCCGCATCTAATTAGCCCCGGCGGGCGCTCGGC‑GGTTAAGAG‑AAT‑C‑G‑T‑TTTTTCC‑CGGGTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACg                                                                                                                                     <  2:1552083/239‑1 (MQ=255)                                                                                                           aaaTACTGTGGGG‑GGGGTGGGGGGCGAACATTCCCGGCGGTCGAATTGCC‑GATATCGGCCCGCAGCAATTTACCCCCGGCGGGCGAGCGGC‑GTTTAAGAG‑AAG‑C‑G‑T‑TTTTTCC‑CGGGTCACCCC‑GTCTCAAATCGTCGCCGGAG‑A‑CAGATTTGCAACCGCGGCGCCGGAGGTCACAATCACCGCCGCCGGCCG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGc                                                                                                                                    <  2:1540944/239‑1 (MQ=255)                                                                                                            aaTACTGTGCGG‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGc                                                                                                                                    <  1:831444/238‑1 (MQ=255)                                                                                                              tACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTTAGAG‑AAT‑C‑A‑G‑TTTTTTT‑CCCGGTTACCC‑CGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCCTGCCGGGGGGCACAATCACCCCCCCCCGCCG‑CCTTCTGACTTTCGCCAGCCCCCGCGCCCGATGCCCccacccaccccc                                                                                                                                  >  1:482962/1‑234 (MQ=255)                                                                                                              tACTGGGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGGGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCa                                                                                                                                 <  1:452756/239‑1 (MQ=255)                                                                                                                   tgCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTTAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCCGGTAACCC‑CGCTTCAATCAGTGCCGGGT‑A‑GAGATTTGCCACCCCCGTGCCGGCGGGCACAATCACCCCCACCCGCCG‑CCTGCTGACTTTCGCCCGCCCCCGCGCCCGAAGCCCCCACCCCCGCCCCTCgga                                                                                                                            >  1:1137372/1‑237 (MQ=255)                                                                                                                   tgCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGGTAAGAGAAAC‑C‑A‑G‑TTTTTTC‑CCGGTT‑ACCC‑CGCCTCCATCAGTGCCGGGT‑A‑GAGAATTTCCCCCCCCCTGCCCGGGGGCGCCAACCACGCCCCCCGCAGCCTTGCTACCTTTCCCCACCCCCACCCCCCCAGGCCCCAccccccccccctcca                                                                                                                             >  2:1019256/1‑228 (MQ=255)                                                                                                                    gggT‑GGGGTGAGAGGCGACCATTCCCGGCTGGCGAATTGCCTGTT‑TCGCGCCGCAGTCATTTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑T‑TTTTTCT‑CCGGTTACCCC‑GGCTTAAATCAGTGCCGGAT‑A‑GAGATTTGCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGaa                                                                                                                            <  1:1082689/236‑1 (MQ=255)                                                                                                                          ggtggggagGCGACAATCCCCGGCGGGCGAGTGACCTGAT‑TCGGGCCGCGGCCAATTGGCGCCGGCGGGGGTTGGCG‑GGTGAAGAG‑AAT‑C‑A‑G‑TTTTTCC‑CCGGTTAACCC‑GGCTTCAACCGGTGCGGGAA‑G‑GGGTTTTCCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCGGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATggg                                                                                                                       <  2:280078/232‑1 (MQ=255)                                                                                                                                        cATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGG‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGaatgaatg                                                                                                        <  1:941531/239‑1 (MQ=255)                                                                                                                                          tccccGGCTGGCGATTTCCCGTTT‑GAGCGCCGAAGTCAATTAGCTCGGCCGGGCGTTCGGC‑GGTTAAGGG‑AAT‑C‑A‑‑‑TTTTTCTCCCGGTTACCCC‑GGCTTCAACAAGTGCCGAAT‑G‑GAGTTTGCCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCg                                                                                                      <  2:1137372/237‑1 (MQ=255)                                                                                                                                            cccGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCTCCCGGTTAACCC‑‑GCTTCCAACAGTGCCGGGT‑A‑GAGATTTTCCCCCCCCGTGCCGGGGGGCACAATCACCGCCACCGGCTG‑CTTGTTGACTTTTGCCCGCCCCCGCGCCACATGCCCCAACCCCCCCTCCTCGCAATGGGGGTGGtgaatgaaagtggg                                                                                                    >  1:757262/1‑233 (MQ=255)                                                                                                                                                   ggCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAAAG‑AAT‑C‑A‑G‑GTTTTCT‑CCGGTTAAACC‑CGCTTCAATCAGTGCCGGAT‑A‑GAGATTTTCCACCGCCGTGCCGGAGGTCCCAATCACCCCCCCCCGCTG‑CTTGCTGACTTTTGCCCGCCCCAGCCCCACATACCCCCACCCCCGCCCATCCAAATGGGGGGGGGGGATGAAATCGGAAAtctc                                                                                              >  1:1192345/1‑238 (MQ=255)                                                                                                                                                      gAATTGCTTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTGGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTccgc                                                                                           <  1:1723103/238‑1 (MQ=255)                                                                                                                                                       aaTTGCCTGTT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGGGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTccgcc                                                                                          <  1:887138/238‑1 (MQ=255)                                                                                                                                                                 t‑tCGCGCCGCAGTCAATTAGCCCCGGCGGGCGATCGGC‑GTTTAAGAG‑ATT‑C‑A‑G‑TTTTTCT‑CCGGTTACCCC‑GGCTTCAATCAGTGCGGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGt                                                                               <  1:1922240/239‑1 (MQ=255)                                                                                                                                                                    cgcgCCGCAGTCAATTAGCTCCGGCGGGGGTTCGGC‑GGTTAAGAG‑AAT‑A‑A‑G‑TTTTTTC‑CCGGTTACCCG‑GGTTTCAATCAGGCCCGGAT‑G‑GAGATTTGCCTCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTa                                                                             <  1:245546/239‑1 (MQ=255)                                                                                                                                                                     gcgcCGCAGTCAATTAGCGCCGGCGGGCGATCGGC‑GTTTAAGAG‑AAT‑C‑A‑T‑TTTTTCT‑CCGGTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTaa                                                                            <  1:82241/239‑1 (MQ=255)                                                                                                                                                                     gcgcCGCAGTCAATTAGCCCCGGCGGGCGTTCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGTTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGTTTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTaa                                                                            <  1:272127/239‑1 (MQ=255)                                                                                                                                                                     gcgcCGCAGTCAATTAGCCCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCC‑CCGGTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTaa                                                                            <  1:1762374/239‑1 (MQ=255)                                                                                                                                                                     gcgcCGCAGTCAATTACCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGTTTTCCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTaa                                                                            <  1:355260/239‑1 (MQ=255)                                                                                                                                                                       gccgcAGTCAATTAGCCCCGGCGGGCGTTCGGC‑GGTTAAGAA‑AAT‑C‑A‑T‑TTTTTCT‑CCGGTTACCCC‑GGCTTCAATCAGTCCGGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAAc                                                                           <  1:1641264/238‑1 (MQ=255)                                                                                                                                                                                 aTTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAAcg                                                                <  1:1643095/239‑1 (MQ=255)                                                                                                                                                                                 aTTAGCGCCGGGGGGCGATCGGC‑GGTTAGGAG‑AAT‑C‑A‑G‑TTTTTCC‑CCGGTTACCCC‑GCCTTCAATCGGTGCGGGAT‑A‑GAGTTTTGCCGCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAGCCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAAcg                                                                <  1:1933829/239‑1 (MQ=255)                                                                                                                                                                                 aTTAGCCCCGGCGGGCGATCGGC‑GTTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAACCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAAcg                                                                <  1:139017/239‑1 (MQ=255)                                                                                                                                                                                 aTTAGCCCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTCCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAAcg                                                                <  1:641557/239‑1 (MQ=255)                                                                                                                                                                                       cccGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGTTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGcc                                                          <  1:610885/238‑1 (MQ=255)                                                                                                                                                                                        ccGGCGGGCGATCGGC‑GGTTAAGAG‑AAA‑C‑A‑G‑TTTTTCT‑CCTGTTAACCC‑GGCCCCAATCAGTGCCCGGT‑A‑AAGAAATTCCACCCCCGTGGCGGGGGGGTAAAACACCGCCACCGGCGG‑CGTTCTGACTTTCTCCCGCCCCCGCCCCCACAGGCCCAACCCAACCACCTCGACAACGGGGTGGGGGTGCAATGCGGGCTTCTCCCCCGCCGCCAACGCTCACACGGTAGAAccggcgccg                                                         >  2:746591/1‑231 (MQ=255)                                                                                                                                                                                            ggggcgATCGGC‑GGTTAAGAA‑AAT‑C‑A‑T‑TTTTTCC‑CCGGTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTGCCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTggg                                                      <  1:799161/237‑1 (MQ=255)                                                                                                                                                                                             gggctttCGGC‑GGTTAAGAA‑AAC‑C‑A‑T‑TTTTTCT‑CCGTTTACCCC‑GGCTTCATTAGGTCCCGGAT‑A‑GAGATTTCCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTgggg                                                     <  1:1276654/232‑1 (MQ=255)                                                                                                                                                                                             gggcgTTCGGC‑GGTGAAGAG‑ATT‑C‑A‑T‑TTTTTCC‑CCGGTTACCCC‑GCCTTCAATCGGTGCCGAAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTgggg                                                     <  1:1761794/238‑1 (MQ=255)                                                                                                                                                                                             gggcgCTGGGG‑GTTTAAGAG‑AAT‑C‑A‑G‑TTTTTCC‑CCGGTAAACCC‑GGCTCAAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTgggg                                                     <  1:684326/238‑1 (MQ=255)                                                                                                                                                                                             gggcgATCGGG‑GGTTAAGAA‑AAT‑C‑A‑G‑TTTTTCT‑CGGGTTACCCC‑GGCTTAAACCAGGGCCGGAT‑A‑GAGATTTCCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTgggg                                                     <  1:1022501/238‑1 (MQ=255)                                                                                                                                                                                             gggcgATCGGC‑GGTTAAGAG‑AAA‑C‑A‑G‑TTTTTCC‑CCGGTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGTTTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTgggg                                                     <  1:1293770/238‑1 (MQ=255)                                                                                                                                                                                             gggcaacgggc‑ggTTAAGAG‑AAC‑C‑G‑T‑TTTTCCT‑CCGGTAACCCC‑GGCTCCAACCGGTGCCGGAA‑A‑AAGATTTGCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTgggg                                                     <  1:450311/230‑1 (MQ=255)                                                                                                                                                                                                  aTCGGG‑GGTTAAGAG‑AA‑‑C‑A‑GTTTTTTCC‑CCGGTTACCCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATa                                                <  1:1018835/238‑1 (MQ=255)                                                                                                                                                                                                   gcagggtgTTAGGAG‑AAT‑C‑C‑G‑TTTTTCC‑CCGGTCCCCCC‑GGTTAAAATCAGTGCGGAAG‑A‑GGGTTTCGCCCCCGCCGTGCCGGAGGTCACAACCCCCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCAAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATa                                                <  2:509330/231‑1 (MQ=255)                                                                                                                                                                                                    cggc‑ggTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGTTTACCCC‑GGCTTCAATCAGGGCCGGAT‑A‑GGGATTGCCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAg                                             <  1:475511/239‑1 (MQ=255)                                                                                                                                                                                                     ggc‑ggTTAA‑AT‑GAT‑C‑A‑T‑TGTTTCC‑CCCGTTTACCC‑TGCTTCAAGAGATGCCGTGT‑AGGAGTTTGCCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCACCCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAg                                             <  2:533164/238‑1 (MQ=255)                                                                                                                                                                                                                     t‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCg                              >  1:536046/1‑239 (MQ=255)                                                                                                                                                                                                                       c‑A‑G‑TTTTTCT‑CCGGTCAACCC‑GGCTTCACTCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCCCGCTCCTCGAACTGGGTGTGGTGCATGAATGCGGAATTCTCCGCCGCCGCTCATGTTAACCGCTTAGACCTCGAGCTTGGGGCGATACCGATGTGTCTTACGCCGt                             >  2:840455/1‑239 (MQ=255)                                                                                                                                                                                                                           gttttttCT‑CCGGTTACCCC‑GGCTTCAATCAGTCCCGGAT‑A‑GAGTTTGGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTg                            <  1:973462/237‑1 (MQ=255)                                                                                                                                                                                                                             tttttC‑‑CCGGTTTACCC‑GTGTTTAACCGGCGCCGGGG‑AGGAGTTTTCCCCCCGCCGTGCCGGAGGTCCCAATCACCGCCACCGGCTG‑CTTGCTGATTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAGTGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGa                           <  2:1417307/238‑1 (MQ=255)                                                                                                                                                                                                                               ttgtccccGGTTACCCC‑GGCTTAAATCAGGCCCGGAT‑A‑GGGATTTGCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGGCTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGa                           <  1:1547644/231‑1 (MQ=255)                                                                                                                                                                                                                                   t‑cCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACTGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTa                    >  1:1409657/1‑239 (MQ=255)                                                                                                                                                                                                                                      cGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAAt                  >  1:818623/1‑239 (MQ=255)                                                                                                                                                                                                                                       ggTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAAt                  >  2:1566971/1‑238 (MQ=255)                                                                                                                                                                                                                                        gTTAACCC‑GGCTTCAATCAGTGCAGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCCCATCGAAATGGGTGTGGCGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGCGCCTGGGGCGATACAGATGTGTCTGATGCAGTGACGCGTTAAt                  >  2:1029237/1‑237 (MQ=255)                                                                                                                                                                                                                                               c‑GGCTTCAACCAGTCCCGTAG‑A‑GAGATTTCCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCATATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGTTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAATGCTTCCAGa         <  1:1638750/239‑1 (MQ=255)                                                                                                                                                                                                                                                 ggCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGACTGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAATGCTTCCAGaa        >  2:286565/1‑239 (MQ=255)                                                                                                                                                                                                                                                 ggCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTACCGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAATGCTTCCAGaa        >  2:222937/1‑239 (MQ=255)                                                                                                                                                                                                                                                   cTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGtgaat                                                                                                             >  1:1052608/1‑136 (MQ=255)                                                                                                                                                                                                                                                   cTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAATGCTTCCAGAATg      >  2:989014/1‑239 (MQ=255)                                                                                                                                                                                                                                                   cTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAATGCTTCCAGAATg      >  1:195558/1‑239 (MQ=255)                                                                                                                                                                                                                                                   cTTAAATCAGGGCGGGAT‑G‑GGAATTGCCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAATGCTTCCAGAAt       <  1:1282068/238‑1 (MQ=255)                                                                                                                                                                                                                                                       aaTCAGTGCCGGAT‑A‑GAGATTTCCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAATGCTTCCAGAATGAccg  <  1:724823/239‑1 (MQ=255)                                                                                                                                                                                                                                                       aaTAAGTGCGGGAT‑A‑GAGATTTGCCCCCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAAGGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAATGCTTCCAGAATGAccg  <  1:1898831/239‑1 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                AACGGGCAGTTGATATGGACTCCCCCCGCATGAAGCGTACCGAGAGCGTGGTCGATGGTAGAAACCAGCCAACGTGCGGGGATATCCTGGGTCGGGCGCGGCAATGAAATACTGTGCGT‑GGGGTGAGAGGCGAACATTCCCGGCTGGCGAATTGCCTGAT‑TCGCGCCGCAGTCAATTAGCTCCGGCGGGCGATCGGC‑GGTTAAGAG‑AAT‑C‑A‑G‑TTTTTCT‑CCGGTTAACCC‑GGCTTCAATCAGTGCCGGAT‑A‑GAGATTTGCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTG‑CTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGCGAGCCTGGGGCGATACAGATGTGTCTGACGCCGTGACGCGTTAATGCTTCCAGAATGACCG  >  NC_007779/2383421‑2383895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑