BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	2,530,688	C→A	7.2%	T39N (ACC→AAC)	Y75_RS12650 →	outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	2,530,688	0	C	A	7.2%	512.5 / 5.2	183	T39N (ACC→AAC)	Y75_RS12650	outer membrane protein
Reads supporting (aligned to +/- strand): ref base C (72/92); new base A (14/2); total (89/94)
Fisher's exact test for biased strand distribution p-value = 1.04e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.33e-01

Only 100 of 209 total aligned reads displayed.

TATTAATCCACGGTAAAAACTGTATTGGCGATATTAATTCCTTTGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTATGGCACC  >  NC_007779/2530451‑2530926

tATTAATCCACGGTAAAAACTGTATTGGCGATATTAATTCCTTTGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGAcc                                                                                                                                                                                                                                                     >  1:849924/1‑239 (MQ=255)

          cGGTAAAAACTGTATTGGCGATATTAATTCCTTTGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATGACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGGGCATTATCT‑GGAC‑TGGGCCAACCCGACt                                                                                                                                                                                                                                            >  1:1694323/1‑238 (MQ=255)

          cGGTAAAAACTGTATTGGCGATATTAATTCCTTTGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGGTATCGGCGGGGCTTTTCT‑TGACTTGAACCAGCCggcga                                                                                                                                                                                                                                            >  1:1783448/1‑236 (MQ=255)

                     gTATTGGCGATATTAATTCCTTTGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAAtc‑g                                                                                                                                                                                                                              <  1:188728/239‑1 (MQ=255)

                       aTTGGCGATATTAATTCCTTTGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAAtc‑g‑t                                                                                                                                                                                                                            <  1:567148/238‑1 (MQ=255)

                                        cTTTGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGCTACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTCCCG‑AAAAATC‑G‑TCGGCCAAATCACACAAAg                                                                                                                                                                                                          <  1:782117/239‑1 (MQ=255)

                                         tttGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAga                                                                                                                                                                                                         <  1:1131651/239‑1 (MQ=255)

                                          ttGCATTAACAATATGTCGTTCTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCCGATATTGGCGTGCATTATCT‑GGAC‑TGGACAAGCCGGGATACCG‑CAAAAAC‑T‑GCGACCAAATCCAAAAAAgat                                                                                                                                                                                                        >  2:320150/1‑239 (MQ=255)

                                           tGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGACTTTTTT‑GGAA‑TTGACTCACCGGAACATCA‑AAAAATCAC‑TCAACAAAATCACACaagatg                                                                                                                                                                                                        >  2:1325708/1‑235 (MQ=255)

                                                  aCAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTTCAGATATCGGCGTGCATTATCT‑GGAA‑TTGACCAGCCGGACTAACC‑AAAAATT‑G‑GTCAACAAAACCCACAAAGATGAattttg                                                                                                                                                                                                >  2:1001436/1‑237 (MQ=255)

                                                  aCAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTgg                                                                                                                                                                                                >  1:1057606/1‑239 (MQ=255)

                                                       atGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTTTCT‑CGAC‑TGGAACAGCCGGACTACCG‑AAAAATC‑G‑TCGGCCAAATCACACAAAGATGATTTTGGGTa                                                                                                                                                                                             >  1:17950/1‑237 (MQ=255)

                                                       atGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTa                                                                                                                                                                                             >  1:1153519/1‑237 (MQ=255)

                                                         gTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCtt                                                                                                                                                                                         <  2:253557/239‑1 (MQ=255)

                                                            gTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGAACAGCCGGACTACCG‑AAAAATC‑G‑TCGACCCAATCACACAAAAAAGATTTTTGGTATCTTTaa                                                                                                                                                                                      >  1:467183/1‑239 (MQ=255)

                                                                       aCCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAg                                                                                                                                                                               <  2:684678/235‑1 (MQ=255)

                                                                                   aGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTTAAGGTGGCGCTAACTTTAg                                                                                                                                                               >  1:1175099/1‑239 (MQ=255)

                                                                                   aGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAg                                                                                                                                                               <  1:320150/239‑1 (MQ=255)

                                                                                        tCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGa                                                                                                                                                                                                                         <  1:1531996/176‑1 (MQ=255)

                                                                                          tactaATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCGTTATTT‑GGAC‑TGGACCCGCCCGACTACCG‑AAAAATC‑G‑TTGACCAAATTACACAAAAATGATTTTGGGTATCTTGAATTTGAAGGGGGCGCTAACTTTAG‑TTtgggg                                                                                                                                                       >  1:1566484/1‑238 (MQ=255)

                                                                                              aataaCGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTTTCT‑GGAC‑TGGACCCGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGGTATCTTGAATTTGAAGGGGGCGCTCACTTTAG‑TTGGGGAGaaa                                                                                                                                                   >  1:700363/1‑239 (MQ=255)

                                                                                                  aCGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑‑AAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAc                                                                                                                                              >  1:1899781/1‑239 (MQ=255)

                                                                                                    gATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑g                                                                                                                                            <  2:1057606/239‑1 (MQ=255)

                                                                                                    gATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑g                                                                                                                                            <  1:1001436/239‑1 (MQ=255)

                                                                                                      tCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTgg                                                                                                                                                                                                <  2:1579341/187‑1 (MQ=255)

                                                                                                      tCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑ggg                                                                                                                                          >  1:1351249/1‑239 (MQ=255)

                                                                                                              gggAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGTCGCGGATTTTCT‑TGAA‑CAGACCAGCCCTAGTGCCC‑AAAAAAC‑G‑TCCAGCAAAGCACCCAAAAATGATTTTGGCTATTCTGAATTTTACGGTGGCGCTAACTTTAG‑TTGGGGGGTAATGAAC‑GGGGTCTTCgc                                                                                                                                  >  2:1634997/1‑238 (MQ=255)

                                                                                                                 aaTTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACt                                                                                                                                <  1:1527875/238‑1 (MQ=255)

                                                                                                                     aTGCTGTGAAAAATCATCTTTTAACTCTGACTCTTTCCTCTATATTAGCGAGTCCGGTTGTATCGTATGCAGAATTTAAAGACGGTTTTGCAGATAGCGGCGTGTATTATCT‑GGAC‑TGGACCAGCCGGACTAACG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTAGCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGTAGAAATGTAC‑GGGTTGTTCGACTGGGaa                                                                                                                           <  2:15321/239‑1 (MQ=255)

                                                                                                                     aTGCTATGAAAAATCATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGaa                                                                                                                           <  2:1459315/239‑1 (MQ=255)

                                                                                                                     aTGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTTGGGAGAAATGTAC‑GGGTTCTTCGACTGGGaa                                                                                                                           <  1:1253950/239‑1 (MQ=255)

                                                                                                                     aTGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGaa                                                                                                                           <  2:1398180/239‑1 (MQ=255)

                                                                                                                     aTGCTAAGAAAAAACATCTGTTAACTCTGACACTTTCCTCTATATTAGCGATTCCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTACCT‑TGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGGCCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGaa                                                                                                                           <  2:1484413/239‑1 (MQ=255)

                                                                                                                      tGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGaa                                                                                                                           <  2:289374/238‑1 (MQ=255)

                                                                                                                      tGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGaa                                                                                                                           >  1:289374/1‑238 (MQ=255)

                                                                                                                         tATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCCTTATTT‑TGAC‑TGGACCAGCCGGACTACCG‑GAAAATC‑G‑TCGACCAAATCACAAAAAGATGGTTTTGGTTATCTTTAATTTGAAGGTGGCGCTAACTTTAG‑TTTGGGAGAAATGTAC‑GGGTTCTTCGACTGGGcaaaat                                                                                                                       >  1:588044/1‑237 (MQ=255)

                                                                                                                         tATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TTGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAAc                                                                                                                        <  2:950265/238‑1 (MQ=255)

                                                                                                                         tATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAAc                                                                                                                        <  2:826971/238‑1 (MQ=255)

                                                                                                                           tGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTTCAGATATCGGCGTGAATTATCT‑TGAC‑AGGGACAGGCGGAATACCC‑AAAAAAC‑G‑TCCACCCAATCACACAAAGATGAATTTGGTTAATTTGAATCTGAAGGTGGGGCCTACTTTAG‑TTGGGGAGAAATGTAA‑CGGTTCTTTGACCTGGAAAAcc                                                                                                                       >  2:1308813/1‑236 (MQ=255)

                                                                                                                           tGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCCGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACt                                                                                                                       >  1:1719426/1‑237 (MQ=255)

                                                                                                                           tGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCCGCGTGCATTATCT‑GGAA‑TGGACCAGCCGGGCTTCCG‑AAAAATC‑G‑TTGACCAAAACACTCAAACGTGATTTTGGGTATCTTTAATTTTAAGGTGGCGCCTACCTTAC‑TTGGGGAGGAATGGACGGGGTTCTTGGATTGGGAAAAttt                                                                                                                      >  2:719431/1‑239 (MQ=255)

                                                                                                                           tGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGAAATCGGGGTGCCTTTTATCGAAC‑TGGA‑CAGCCCGGCTACCG‑CAAAATA‑C‑TGGACCAAAATACCCAAAGAAGATTTTGGTTTTCTTGGATTTTCAGGTGGCGCTAAACTTAA‑TTGGGGGGAAATGGAA‑GGGTTCTTTAAACGGGCAAACttt                                                                                                                     >  2:848701/1‑238 (MQ=255)

                                                                                                                                     tCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTTCAGATATCGGCGTGCATTATTT‑GGAC‑TTGACCAGCCGGGCCACCG‑AAAAAAC‑G‑GCGACCCAAACAAACAAAGATGATTTTTGTTATCTTGAATTTGTAGGGGGGGCTAACTTTTG‑GTGGGGAGAAAAGTTA‑GGGTTTTTCGACTGGGGAAAATTTTTTAACgggc                                                                                                           >  2:1596436/1‑237 (MQ=255)

                                                                                                                                     tCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TTGACCAGCCGGAATACCG‑AAAAATC‑G‑GCGACCAAATCACACAAAGAAGATTTTTGTTATCTTGAATTTGAAGGTGGGGCCAAATTTAG‑TTGGGGAGGAATGTAA‑TGGTTTTTTGACTGGGGAAAACTCTTTTACGGTc                                                                                                           >  2:552478/1‑239 (MQ=255)

                                                                                                                                       ttttAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTTTATTATCT‑GGGC‑TTGAACAACCGGACTACCGAAAAAATC‑G‑T‑GACCAAAAAACACACAGAGGATTTTGGTTATCCTTAAATTTAAGGCGGAGCTCACTTTAT‑TTGGGGGTAAAACTGT‑GGGTTTTTTCACTGGGTAAAATTcgtacaaggtag                                                                                                          >  2:1146591/1‑227 (MQ=255)

                                                                                                                                       ttttAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGc                                                                                                         <  1:1422397/239‑1 (MQ=255)

                                                                                                                                       ttttAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGc                                                                                                         <  1:1596436/239‑1 (MQ=255)

                                                                                                                                       ttttAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGc                                                                                                         <  2:1762879/239‑1 (MQ=255)

                                                                                                                                        tttAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACtt                                                                                                                                                                  <  1:1932381/183‑1 (MQ=255)

                                                                                                                                             ctctGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCataat                                                                                                   <  2:935099/239‑1 (MQ=255)

                                                                                                                                                 gACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGAAAACGTCGGGCGTGAAAT‑AGGA‑TGGATCATCCCGACTACCC‑CAAAATC‑G‑ACGAACAAATTACACAAAACGGATTTTGGTTATCTTGTATTTAGAGGAGGGGCTAACATTTG‑GTGGGGAGAAATGTCA‑GCGTTCTTCGACTGGGTAAAGTTCTATATCGGTCGGGATAATaaa                                                                                                >  2:1774820/1‑238 (MQ=255)

                                                                                                                                                   cacTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTGGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAAcc                                                                                              <  2:656180/238‑1 (MQ=255)

                                                                                                                                                    acTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGaaaa                                                                                                                         <  1:479026/210‑1 (MQ=255)

                                                                                                                                                       ttCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTa                                                                                        <  1:242530/239‑1 (MQ=255)

                                                                                                                                                        tCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCTGCGTGCCTTATTT‑TGAC‑TTGGTCAGCCGGACTACCG‑GATAATC‑G‑TCGACCAAATCACACAAAAATGATTTTTGTTATCTTGGATTTTGAGGAGGCGCCAACTTTAG‑GTGGGGGGAAATGTAC‑GGGGTCTTCGCGTTGGAAAAATTCTATAAAGGTGGTCATAATAAACCA‑GGTat                                                                                       >  2:1630984/1‑238 (MQ=255)

                                                                                                                                                            ctATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGag                                                                                   <  2:1351249/239‑1 (MQ=255)

                                                                                                                                                            ctATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGag                                                                                   <  2:1276397/239‑1 (MQ=255)

                                                                                                                                                            ctATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGag                                                                                   <  1:26193/239‑1 (MQ=255)

                                                                                                                                                            ctATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGag                                                                                   <  1:719431/239‑1 (MQ=255)

                                                                                                                                                            ctATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGag                                                                                   <  1:1792210/239‑1 (MQ=255)

                                                                                                                                                                       aTACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTTCAGATATCGGCGTGCCTTTTCT‑TGAA‑TGGACCAGCCGGAATACCC‑AAAAATC‑G‑TCGATCAAAACACACAAAGATGATTTTTGGTGTCTTGAATTTTGAGGCTGCGCTCACTTTAT‑TTGGGGAGGAAAATAA‑GGGTTCTTCTAATGGGTAAATATTTATTAAGGTCGCCATAATAAAACC‑GGTAGCGAGGCGCGTtata                                                                         >  2:1927445/1‑238 (MQ=255)

                                                                                                                                                                       aTACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCCATATTT‑GGAC‑TGGAACAGCCGGGATTCCC‑GAAAATC‑G‑TCGACCAAAACACACAAAGATGGTTTTTGGTATCTTGAATTTGAAGGGGGGGCTAAATTTAG‑TTTGGGGGAAATGTAA‑GGGTTTTTTGACTGGGAAAAATTTTATTACGGTTCCCATAAAAAAACA‑GGTTGCGagacacggttaa                                                                         >  2:1861638/1‑228 (MQ=255)

                                                                                                                                                                         aCCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGt                                                                                                            >  1:1226644/1‑202 (MQ=255)

                                                                                                                                                                         aCCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTa                                                                                        >  1:9447/1‑221 (MQ=255)

                                                                                                                                                                          ccTGGTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATGTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATAcc                                                                       <  2:160371/237‑1 (MQ=255)

                                                                                                                                                                              ttgtATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTaaa                                                                 >  1:1406599/1‑239 (MQ=255)

                                                                                                                                                                               tgtATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTaaa                                                                 <  1:1433388/238‑1 (MQ=255)

                                                                                                                                                                                   tctcATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGGATTATCT‑GGAC‑TGGACCAGCCGGAGTTACG‑AAAAATA‑G‑TTGACCCAATCACACAAAAATGATTTTGGTTATCTTGAATTTTAAGGTGGCGCTAACTTTAG‑GTGGGGAGAAATGTAC‑GGGGTTTTCGGCTGGGGAAACCTCTATAAAGGGCGCCATAATAAAACA‑GGGAACGAGGCACGTTATTACTTTTAAAATa                                                             >  2:1231999/1‑238 (MQ=255)

                                                                                                                                                                                   tctcATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGGA‑TGGACCAGCCGGACTACCG‑‑AAAATA‑G‑TCGGCCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGGGGCGCTAACCTTTG‑TTGGGGAGGAATGTAC‑GGGTTTTTCGACTGGGGAAAATTCTATTACGGTGGCCAAAATAAAACA‑GGTAACCAGGAGCGGTATACCTTTAAAAATAcc                                                           >  2:122374/1‑239 (MQ=255)

                                                                                                                                                                                      taTGCAGATTGAAAAGGCGGTTTTGCAGATATCGGGGTGCCTTCTCT‑GGAC‑TGGTCCAGCCGGACTACCG‑AAGAATC‑G‑TCGACCAAATCCCACAAAGATGATTTTGCTTATCTTGAATTTGAAGGTGGCGCTACCTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATATCGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACTTTTAAAAATACCaa                                                         <  2:487041/238‑1 (MQ=255)

                                                                                                                                                                                      cATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCaa                                                         <  1:272147/239‑1 (MQ=255)

                                                                                                                                                                                      cATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCaa                                                         >  1:878876/1‑239 (MQ=255)

                                                                                                                                                                                      cATGCAGAAGTTAAAGGCGGTTTTGCAGATATCGGCGTTCATTATCT‑GTAC‑TGGACCAGCCGGACTCCCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGATAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAATCCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAAAACCaa                                                         <  2:386571/239‑1 (MQ=255)

                                                                                                                                                                                        tGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCCGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAAcc                                                       >  1:770515/1‑239 (MQ=255)

                                                                                                                                                                                        tGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑GCTCG‑CCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGGAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGGTCTTTGACTGGGAAAACTTCTCTAAAGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATAACTTTAAAAATACCAAcc                                                       >  1:1141385/1‑239 (MQ=255)

                                                                                                                                                                                        tGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTa                                                                                                                                               <  1:327685/153‑1 (MQ=255)

                                                                                                                                                                                        tGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGag                                                                                   >  1:1766696/1‑211 (MQ=255)

                                                                                                                                                                                               tttAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCaa                                                         <  1:382160/230‑1 (MQ=255)

                                                                                                                                                                                                ttAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTAc                                               <  1:1505265/239‑1 (MQ=255)

                                                                                                                                                                                                         gTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGac                                      >  1:665080/1‑239 (MQ=255)

                                                                                                                                                                                                                   tatCAGCGTGCATTATCT‑GGAC‑TGAGCCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCGTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTa                            <  2:1719426/239‑1 (MQ=255)

                                                                                                                                                                                                                     tCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAAt                          <  1:1634997/239‑1 (MQ=255)

                                                                                                                                                                                                                         cGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGG‑TAACTTTAAATTGAAGGGGGCCCCAAATTTAGTTTGGGAAGAATTTTAC‑‑GGTTCTTTGACTGGGAAAACTTTTATAACGGTTGCCAAAATTAACCAGGGTGCCGACAAGGGTTTTACTTTTAAAATAACAAACCG‑ATTTACCTGGGGGACACCGGATTTAAtctcc                      >  2:1850356/1‑237 (MQ=255)

                                                                                                                                                                                                                            gCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACt                   <  1:847672/239‑1 (MQ=255)

                                                                                                                                                                                                                              aTTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGGAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACtt                  >  1:646965/1‑238 (MQ=255)

                                                                                                                                                                                                                               ttATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGc                <  1:300715/239‑1 (MQ=255)

                                                                                                                                                                                                                                 aTCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCAt              <  1:1231999/239‑1 (MQ=255)

                                                                                                                                                                                                                                 aTCT‑GGAC‑TGGACCAGCCAGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GTTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCAt              <  2:1901765/239‑1 (MQ=255)

                                                                                                                                                                                                                                        ac‑tggacCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTAt        >  2:1662853/1‑239 (MQ=255)

                                                                                                                                                                                                                                        ac‑tggacCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTAt        >  2:854827/1‑239 (MQ=255)

                                                                                                                                                                                                                                         c‑tggacCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTATg       <  1:1313061/239‑1 (MQ=255)

                                                                                                                                                                                                                                            ggacCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTATGGc     >  1:1677416/1‑239 (MQ=255)

                                                                                                                                                                                                                                             gacCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTa                                                                                        >  1:1618735/1‑155 (MQ=255)

                                                                                                                                                                                                                                             gacCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTATGGc     >  1:525222/1‑238 (MQ=255)

                                                                                                                                                                                                                                              acCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCg                                                                                                          >  1:1027803/1‑137 (MQ=255)

                                                                                                                                                                                                                                              acCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGag                                                                                   >  1:643773/1‑159 (MQ=255)

                                                                                                                                                                                                                                              acCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAAt                          >  1:185242/1‑216 (MQ=255)

                                                                                                                                                                                                                                              acCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTATGGCa    >  1:1297070/1‑238 (MQ=255)

                                                                                                                                                                                                                                              acCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTATGGCa    >  1:67587/1‑238 (MQ=255)

                                                                                                                                                                                                                                               ccAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTATGGCAcc  <  1:248042/239‑1 (MQ=255)

TATTAATCCACGGTAAAAACTGTATTGGCGATATTAATTCCTTTGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGATCGGCATAGGGAATTATGCTATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCT‑GGAC‑TGGACCAGCCGGACTACCG‑AAAAATC‑G‑TCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAG‑TTGGGGAGAAATGTAC‑GGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCA‑GGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTATGGCACC  >  NC_007779/2530451‑2530926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`