BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	2,666,599	A→G	100%	intergenic (‑97/+63)	Y75_RS13270 ← / ← Y75_RS13275	3‑phenylpropionate MFS transporter/DNA‑binding transcriptional regulator HcaR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	2,666,599	0	A	G	99.4%	760.8 / ‑4.5	215	intergenic (‑97/+63)	Y75_RS13270/Y75_RS13275	3‑phenylpropionate MFS transporter/DNA‑binding transcriptional regulator HcaR
Reads supporting (aligned to +/- strand): ref base A (0/2); new base G (112/99); total (113/102)
Fisher's exact test for biased strand distribution p-value = 2.24e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 216 total aligned reads displayed.

CCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCA  >  NC_007779/2666365‑2666834

    aaTAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGt                                                                                                                                                                                                                                      >  2:1171453/1‑238 (MQ=255)

            gCCCATGGCTTCTGGCGTTAACCCAATCACTTTCAGCCAGCGGCACCAGAAAGGCAGAAAAAGGCCGTAACTAAAAAAGTATGTGAAATAACCGAGCG‑CAACAACTCGCGTCGATTGCAAAACCATGCGTCGCTACCGTCAGGAGGCGTTAGTCTGGGGTTAATCGACTGTTGGCGCAAGTAGAAAAATAAGAATATTCGAGCCTCCTTCCAGCTGTCTGTAGCGCAAGTTCACACGc                                                                                                                                                                                                                              >  2:1506389/1‑238 (MQ=255)

              cGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACt                                                                                                                                                                                                                           >  1:1933059/1‑239 (MQ=255)

                 tGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTaaa                                                                                                                                                                                                                        >  1:540407/1‑239 (MQ=255)

                      tCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTaaaaa                                                                                                                                                                                                                      >  1:689654/1‑236 (MQ=255)

                         ggCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTgag                                                                                                                                                                                                                <  2:1116496/239‑1 (MQ=255)

                             ttAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATcc                                                                                                                                                                                                            >  1:621315/1‑239 (MQ=255)

                                   cAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACg                                                                                                                                                                                                      <  1:1496187/239‑1 (MQ=255)

                                     aTCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGAACTAAAAAACTGAGATCCGCGACGCa                                                                                                                                                                                                    >  2:645460/1‑239 (MQ=255)

                                      tCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCAt                                                                                                                                                                                                   <  2:865912/239‑1 (MQ=255)

                                      tCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCAt                                                                                                                                                                                                   >  2:565819/1‑239 (MQ=255)

                                          tttAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGtt                                                                                                                                                                                                >  2:1838948/1‑238 (MQ=255)

                                                    aCGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGAt                                                                                                                                                                                                              <  2:764860/214‑1 (MQ=255)

                                                    aCGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAaataat                                                                                                                                                                                     >  2:661194/1‑239 (MQ=255)

                                                    aCGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAaataat                                                                                                                                                                                     >  1:1668597/1‑239 (MQ=255)

                                                              aaGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTa                                                                                                                                                                            <  1:91091/238‑1 (MQ=255)

                                                                  tAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCg                                                                                                                                                                       >  2:1552379/1‑239 (MQ=255)

                                                                       aaaTGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACg                                                                                                                                                                  <  1:380775/239‑1 (MQ=255)

                                                                           gCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGTCAGCCA‑GCGCGTGGATCGCAAAACCATGAGTCCCTCCCGTCAGTAGGCGCTAGTCTGGGGTTAATCGAATGTCGGCGCAAGTTGCAAAATAAGAATCTACGAGCCGGCTTCCCGATGGCTGTAGCGCCAGTTCACAAGCACTAAAAACCTGCGATCAGCGTCGCATGTCGCAACAATAATGCGTAAGTATCCCGTGACGcat                                                                                                                                                               >  2:1669591/1‑236 (MQ=255)

                                                                           gCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCtt                                                                                                                                                               >  1:1951943/1‑238 (MQ=255)

                                                                           gCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGAGTAATTATGCCGttcacatt                                                                                                                                                               >  2:1462075/1‑232 (MQ=255)

                                                                            ccGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTg                                                                                                                                                              >  2:1148368/1‑238 (MQ=255)

                                                                                aaCTAAAAAAGTATGTGAAATAGCCGAGCGGCAACCA‑GCGCGTGGATTGCAAAACCAGGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTAGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCaaa                                                                                                                                                         <  2:741390/239‑1 (MQ=255)

                                                                                aaCTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCaaa                                                                                                                                                         <  1:770631/239‑1 (MQ=255)

                                                                                aaCTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCaaa                                                                                                                                                         <  1:1552379/239‑1 (MQ=255)

                                                                                aaCTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCaaa                                                                                                                                                         <  1:1097616/239‑1 (MQ=255)

                                                                                aaCTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCCGGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCaaa                                                                                                                                                         <  2:63576/239‑1 (MQ=255)

                                                                                     aaaaaTTATTGGAAATAGCCTAGGGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGTGGCGTTAGTCTGGGGTTAATCGAATGTTCTTGCAAGTTGAAAAAAAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTc                                                                                                                                                    <  2:1604681/239‑1 (MQ=255)

                                                                                           tATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGcac                                                                                                                                              >  1:801273/1‑239 (MQ=255)

                                                                                             tgtgAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACaa                                                                                                                                            >  1:585567/1‑239 (MQ=255)

                                                                                              gtgAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAAt                                                                                                                                           <  1:1148368/239‑1 (MQ=255)

                                                                                               tgAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATg                                                                                                                                          >  1:1159405/1‑239 (MQ=255)

                                                                                                    ttgCCGAGAGCCAGCCA‑GCGCGTGGATTGCAAAACCATGAGTCCCGCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAGGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCGTGCCAAACGTTCCTGCACAATGGCGAt                                                                                                                                     <  2:558089/237‑1 (MQ=255)

                                                                                                     aGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATg                                                                                                                                    >  1:662189/1‑239 (MQ=255)

                                                                                                       ccGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACg                                                                                                                                                                  >  2:180138/1‑207 (MQ=255)

                                                                                                         gAGCGTCAGCGA‑GCGCGTCGATTGCAAAAACATGTGTCCCTCCCGTCAGGAGGCGTTAGTCTGGAGTTAATCGAATGTGGTTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAGCTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGTACGATGGCGATGaaa                                                                                                                                 <  2:582391/238‑1 (MQ=255)

                                                                                                          aGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATc                                                                                                                               >  1:708990/1‑239 (MQ=255)

                                                                                                            cgcCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATcgc                                                                                                                             >  1:143032/1‑239 (MQ=255)

                                                                                                            cgcCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATcgc                                                                                                                             >  2:654082/1‑239 (MQ=255)

                                                                                                                 aCCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAAt                                                                                                                        >  1:947104/1‑239 (MQ=255)

                                                                                                                       cgcgTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCAGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAACCGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCg                                                                                                                    >  2:1083965/1‑238 (MQ=255)

                                                                                                                        gcgTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAACCTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAACCGTTCCTCCACAATGGCGTTGAAATCGCGTAATGCCg                                                                                                                    >  1:1792859/1‑237 (MQ=255)

                                                                                                                        gcgTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGc                                                                                                                  <  1:654082/239‑1 (MQ=255)

                                                                                                                        gcgTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGc                                                                                                                  <  1:1808518/239‑1 (MQ=255)

                                                                                                                         cgTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGTTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGc                                                                                                                  <  2:1314107/238‑1 (MQ=255)

                                                                                                                              aTTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCAt                                                                                                             >  2:163463/1‑238 (MQ=255)

                                                                                                                              aTTGCAAAACCATGAATCCCTCCCGTCAGGAGGAGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATCAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATACGTAATTATGCCGTTAAGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCAGGCTTcc                                                                                                              >  1:1932255/1‑236 (MQ=255)

                                                                                                                               ttGCTAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGCGGTTAATCGAAGTTTGGTGCAAGTTGAAAAATACGAATATTCTGGCCTGGTTCCCGATGTCTGTAGCGCCATTTCACAAGCTCTATTAGACTGAGATCCGAGACGCATGTTGGAGAAATAAGGCGTAATGATGGCGTTACGCTTACCAATCTTTCCGGCACAAGGGCGATGAGAGCGCATAGTGCCGGTTCCAtct                                                                                                           <  2:1226232/239‑1 (MQ=255)

                                                                                                                                    aaaCCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCt                                                                                                      <  2:9004/239‑1 (MQ=255)

                                                                                                                                        cATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTttct                                                                                                  >  1:1180666/1‑239 (MQ=255)

                                                                                                                                          tGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTATCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTttctt                                                                                                 >  2:625506/1‑238 (MQ=255)

                                                                                                                                          tGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTttctt                                                                                                 >  2:704417/1‑238 (MQ=255)

                                                                                                                                          tGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTttctt                                                                                                 >  1:1053956/1‑238 (MQ=255)

                                                                                                                                           gAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTcc                                                                                               <  1:632693/239‑1 (MQ=255)

                                                                                                                                               ccctaccGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGc                                                                                           <  2:692510/239‑1 (MQ=255)

                                                                                                                                                cctcccGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGcc                                                                                          <  1:1623829/239‑1 (MQ=255)

                                                                                                                                                cctcccGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGcc                                                                                          <  1:130011/239‑1 (MQ=255)

                                                                                                                                                  tcccGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAAt                                                                                                                                           >  1:1374824/1‑188 (MQ=255)

                                                                                                                                                  tcccGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAAt                                                                                                                                           <  2:1374824/188‑1 (MQ=255)

                                                                                                                                                  gcccTTCAGGAGGCTTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCAt                                                                                        <  2:1951943/238‑1 (MQ=255)

                                                                                                                                                       tCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTa                                                                                   >  2:1478525/1‑239 (MQ=255)

                                                                                                                                                        cAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTaa                                                                                  >  2:851896/1‑239 (MQ=255)

                                                                                                                                                             ggCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGGAATTATGCCGTTACGCTTGCCAAACTTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGTCTTCATCTCCCCTTTCCTCCACGCCATCAGTAAAGCa                                                                              <  2:1932754/238‑1 (MQ=255)

                                                                                                                                                              gCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCTCTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCaaa                                                                                                                                                         <  1:1351266/162‑1 (MQ=255)

                                                                                                                                                              gCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAACACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGcc                                                                                          >  2:1576680/1‑225 (MQ=255)

                                                                                                                                                              gCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGcc                                                                                          <  1:1576680/225‑1 (MQ=255)

                                                                                                                                                               cGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCaa                                                                             <  1:85653/237‑1 (MQ=255)

                                                                                                                                                                gTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATgg                                                                          >  2:1936546/1‑239 (MQ=255)

                                                                                                                                                                 ttAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCAt                                                                                        <  1:1073910/224‑1 (MQ=255)

                                                                                                                                                                 ttAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCAt                                                                                        >  2:1073910/1‑224 (MQ=255)

                                                                                                                                                                  tAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCTGGCTTCATCTCCCCTTTCTTCCCCGCCATCATTAAAGCAATGGa                                                                         <  2:258561/238‑1 (MQ=255)

                                                                                                                                                                   cgTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCGTCAGGAAAGCAATGGAAg                                                                       >  2:491108/2‑239 (MQ=255)

                                                                                                                                                                      cTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGca                                                                    <  1:1635546/239‑1 (MQ=255)

                                                                                                                                                                         gggTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCt                                                                                                      <  1:836644/202‑1 (MQ=255)

                                                                                                                                                                         gggTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCt                                                                                                      >  2:836644/1‑202 (MQ=255)

                                                                                                                                                                             tAATCGAATGTTGGTGAAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGGTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGGAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTGCCACGCCATCAGTAAAGCAATGGAAGGCACATTTc                                                              <  2:186895/238‑1 (MQ=255)

                                                                                                                                                                                    aTGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATg                                                      <  1:1323995/239‑1 (MQ=255)

                                                                                                                                                                                        tGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGAc                                                  <  1:1207265/239‑1 (MQ=255)

                                                                                                                                                                                        tGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGAc                                                  <  1:1838948/239‑1 (MQ=255)

                                                                                                                                                                                        tGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGAc                                                  <  1:1530918/239‑1 (MQ=255)

                                                                                                                                                                                         ggTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACg                                                 >  1:1267644/1‑239 (MQ=255)

                                                                                                                                                                                         ggTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACg                                                 >  2:844937/1‑239 (MQ=255)

                                                                                                                                                                                          gTGCAAGTTGAAAAATAAGAATCTTCGAGCCTGCTCCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCATGCACAATGGCGATGAAATCGCGTAATGCCGGCCGCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAATGCACATTTCCGGCAATGGGACGa                                                >  2:377875/1‑239 (MQ=255)

                                                                                                                                                                                          gTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGa                                                >  1:283979/1‑239 (MQ=255)

                                                                                                                                                                                          gTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGa                                                >  2:940855/1‑239 (MQ=255)

                                                                                                                                                                                                  tGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAaacaac                                        <  1:70002/239‑1 (MQ=255)

                                                                                                                                                                                                  ggAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTATTGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAaacaac                                        <  2:1206831/238‑1 (MQ=255)

                                                                                                                                                                                                       aataataatAGTCGAGCCTGCTTCCCGATGTCTGTAGCTCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTc                                   <  2:974194/239‑1 (MQ=255)

                                                                                                                                                                                                       aaTAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTc                                   <  1:569651/239‑1 (MQ=255)

                                                                                                                                                                                                           aGAATATTCGAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTAACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGCAAAACAACCTGTCCGGt                               >  2:1648561/1‑239 (MQ=255)

                                                                                                                                                                                                                    gAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAatt                      >  2:71088/1‑239 (MQ=255)

                                                                                                                                                                                                                    gAGCCTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAatt                      <  1:1478525/239‑1 (MQ=255)

                                                                                                                                                                                                                       ccTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAaac                                           >  1:1733724/1‑215 (MQ=255)

                                                                                                                                                                                                                       ccTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTGTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAaac                                           <  2:1733724/215‑1 (MQ=255)

                                                                                                                                                                                                                       ccTGCTTCCCGATGTCTGTAGAGCCAGTTCACAAGCACTAAAAAACTGACATCCGCGAAGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCATGCACACTGGCGATGAAATCGCGTAATGCAGGCTTCATCTCACCTTTCTTCCACGCCATCAGTAAAGCAATGGACGGCACATTCCCGGCAATGGAACGAAAAACCAACTGACCGGTATTAAAattatt                   >  2:461674/1‑239 (MQ=255)

                                                                                                                                                                                                                        cTGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAattatt                   <  1:425488/238‑1 (MQ=255)

                                                                                                                                                                                                                         tGCTTCCCGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCa                 <  1:248027/239‑1 (MQ=255)

                                                                                                                                                                                                                                ggATGTTTGTAGGGCCATTTAACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGAACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACAGTTCCGGCAATGGGCCGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAAcc          <  2:134141/238‑1 (MQ=255)

                                                                                                                                                                                                                                cGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAAcc          <  1:151168/239‑1 (MQ=255)

                                                                                                                                                                                                                                cGATGTCTGTAGCGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAAcc          <  1:71088/239‑1 (MQ=255)

CCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCA‑GCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGAATATTCGAGCCTGCTTCCCGATGTCTGTAACGCCAGTTCACAAGCACTAAAAAACTGAGATCCGCGACGCATGTTGCAAAAATAATGCGTAATTATGCCGTTACGCTTGCCAAACGTTCCTGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCAGTAAAGCAATGGAAGGCACATTTCCGGCAATGGGACGAAAAACAACCTGTCCGGTATTAAAATTATTCATATAACCGGGTATCA  >  NC_007779/2666365‑2666834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`