BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,152,550	A→C	16.1%	H111P (CAC→CCC)	Y75_RS15660 →	DedA family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,152,550	0	A	C	16.1%	296.2 / 2.8	102	H111P (CAC→CCC)	Y75_RS15660	DedA family protein
Reads supporting (aligned to +/- strand): ref base A (65/16); new base C (2/19); total (67/35)
Fisher's exact test for biased strand distribution p-value = 2.83e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 103 total aligned reads displayed.

GTTTGCCACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGTA  >  NC_007779/3152314‑3152782

gTTTGCCACGCTGTTTTTAGAAAACGGCTTGCGGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATCCTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCAcc                                                                                                                                                                                                                                         <  1:1566731/239‑1 (MQ=255)

 tttGCCACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGGTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCGGGCTGG‑CACAAC‑TTTCT‑GCTAAATATCaact                                                                                                                                                                                                                                        >  2:605979/1‑236 (MQ=255)

 tttGCCACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGACCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCa                                                                                                                                                                                                                                        >  1:1472288/1‑239 (MQ=255)

      cACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAgcgc                                                                                                                                                                                                                                    >  1:838560/1‑238 (MQ=255)

       ccggtttttttAGAACGCGCCCTGGGCCCCGCCTCATTTTTGCCGGGGGACAGTTTGTTGATACGGGCAGGCGCTTTGATTGCCCGGGGGGTTATGGATTTTCTGCTTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAgcgccc                                                                                                                                                                                                                                  <  2:81955/233‑3 (MQ=255)

        cgttttttttAAAAACCGGCCTGCGCCCCGCCTCATTTTTGCCGGGGGACAGTTTTTTGATACTGGCAGGCGCATTGATTGCCCGGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGcc                                                                                                                                                                                                                                 <  2:1468917/234‑1 (MQ=255)

        cGCTTTTTTTAGATAGCGGCCGCCGGCCCGCCTCATTTTTGCCAGGCGACAGCTTTTTGTTCCTGGCAGGCGCATTGATTGCCCTGGGGGTTATGGATTTTTTGCCTCCGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGcc                                                                                                                                                                                                                                 <  2:1461473/239‑1 (MQ=255)

          ttGTTTTTAGAAACCGGCTGGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTGGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCAc                                                                                                                                                                                                                               <  1:473467/238‑1 (MQ=255)

             tttttAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCt                                                                                                                                                                                                                             >  1:944200/1‑238 (MQ=255)

              tttaaaaaacCGGCCTTCTGCCCGCCTCATTTTTGCCGGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGc                                                                                                                                                                                                                           <  1:1168010/233‑1 (MQ=255)

                    aaaaCGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCCAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGttt                                                                                                                                                                                                                     >  1:118026/1‑239 (MQ=255)

                       aCGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTTCCCCGGGGGGTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑CTCCT‑GCTAAATATCCACACCGCCCCAcccccatcgttga                                                                                                                                                                                                                   >  2:435480/1‑227 (MQ=255)

                       aCGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCCGCGCGCCACCTGCATGTTTGa                                                                                                                                                                                                                   >  2:748157/1‑238 (MQ=255)

                       aCGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGa                                                                                                                                                                                                                   >  1:1030224/1‑238 (MQ=255)

                       aCGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGa                                                                                                                                                                                                                   >  1:1908330/1‑238 (MQ=255)

                       aCGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGa                                                                                                                                                                                                                   >  1:1340309/1‑238 (MQ=255)

                       aCGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGCGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCCCCACCTGCATGTTTGa                                                                                                                                                                                                                   >  1:143085/1‑238 (MQ=255)

                            gtgctgcCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATCCTGGCAGGCGCTTTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGGGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGcc                                                                                                                                                                                                              <  1:872163/237‑1 (MQ=255)

                                tgcCCCCCTCATTTTGCCCAGGCGAAAGTTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGt                                                                                                                                                                                                         <  1:605979/239‑1 (MQ=255)

                                    cGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCCGGGGGGTATGGATTTTCTGCCTACCACTGCGATT‑CTTACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATTTTCCGGGGCGCTGGTTAGGGG‑ATAAC‑AAAAAGGTGCAAG‑TGTGGCTGG‑CCCCGC‑TTCCT‑GCTTAAATTCCCCATCCACCCCCCTTCATGTTTGGCcccccacgtct                                                                                                                                                                                                       >  2:1569270/1‑230 (MQ=255)

                                                 ccAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGctgctg                                                                                                                                                                                          >  1:1169113/1‑237 (MQ=255)

                                                     gtggcgtcgttttgATAGTGGGGGGCTCTTGGATTGCCCGGGGTGTTGTGTTTTTTCGGCCTGCGTTTGGGATT‑CTGACCGCGGCAGCAAGTCTGGGCTGCTGGTTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCGGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGctggctgg                                                                                                                                                                                     <  2:1012517/227‑1 (MQ=255)

                                                             tttttgATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGCCCGCCGCAGCAAGTCTGGTCTGCGGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTc                                                                                                                                                                             <  1:144292/235‑1 (MQ=255)

                                                                 tgATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTGCGATTGCGCTT‑CTTACCGCCGCAGCAAGTCTGGGCTGCTGGCCAAGTTATATTTAGGGGCGCTGGTTAGGGA‑ATACC‑AAAAAGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GGTAAATATCACCCGCGCGCAACCTGCATGTTTGACCGCCACGGTCGGCCTGCGCTGCGGGCTGGACGTTTGCttt                                                                                                                                                                          >  2:170344/1‑236 (MQ=255)

                                                                 ggATACTGGCGGGGGAATTGATTGCCGGGGGGTTTATGGATTTTCGCCCTACAATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCa                                                                                                                                                                        <  1:1750307/238‑1 (MQ=255)

                                                                       tagggagcggATTGTATGCCCAGGGGGTTTGGGGTTTTCTTCCCACGGTTGCGGTTGTTGGCCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATCCC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCCCCAGCGCGCCCCCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGt                                                                                                                                                                   <  2:39471/233‑1 (MQ=255)

                                                                              cgcATTGATTGCCCAGGGGGTTATGGATTTTCTGCTTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACg                                                                                                                                                            <  1:281100/238‑1 (MQ=255)

                                                                                   tgattgCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCCCCACGGTCTCCTGGCGCTGCTGGCTGGACGTTTTTCTGCATTTTTCCGTACgctgct                                                                                                                                                       >  2:1391200/1‑238 (MQ=255)

                                                                                       tgCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCCTTTGTCCGGACGCTGCTGCCa                                                                                                                                                   >  2:828127/1‑238 (MQ=255)

                                                                                              ggggTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGc                                                                                                                                           >  1:823235/1‑239 (MQ=255)

                                                                                               gggTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGCACGCTGCTGCCAACCATGGCg                                                                                                                                          >  1:1242693/1‑239 (MQ=255)

                                                                                                    aTGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAAt                                                                                                                                     >  1:1016806/1‑239 (MQ=255)

                                                                                                          tttCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCgg                                                                                                                               >  1:1553340/1‑239 (MQ=255)

                                                                                                           ttCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGcc                                                                                                                                                    >  1:1282296/1‑217 (MQ=255)

                                                                                                            tCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCgg                                                                                                                               >  1:1629547/1‑237 (MQ=255)

                                                                                                            tCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCgg                                                                                                                               >  1:891302/1‑237 (MQ=255)

                                                                                                            tCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGAGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGG‑TTCCT‑GCTAAATATCACCAGCACGCCACCTGCCTGTTTGGCCGCCAAGGTCTGCTGGCCCCGCTGGCTGGAACTTTTTTTGCATTTTTCCGTACGATTCCGCCCACCATTGCgggcactttaccg                                                                                                                              >  2:1743460/1‑228 (MQ=255)

                                                                                                               gCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTg                                                                                                                           >  1:81959/1‑238 (MQ=255)

                                                                                                                ccTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGGATTTCCCGttttc                                                                                                                          >  2:1285330/1‑234 (MQ=255)

                                                                                                                  tACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCaa                                                                                                                       >  1:1058500/1‑239 (MQ=255)

                                                                                                                            aTT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCt                                                                                                              >  1:1128424/1‑238 (MQ=255)

                                                                                                                               gtgacccgccgCGGCAGGGCGGGGGTGTGGGCTAATTTTTATTAGGGGGCG‑TTGTTAGGGACATA‑C‑AAACAGGGGAAAGTGCGGGCGGG‑CCCCGT‑TTCCG‑TATAAAAATCCCCCGCGCGCCCCCTGTTTTTTTGCCCGCCGCGGTCTGCTGGCGCTGCGGGCTGGACGTTTTCTTGCATTTGTCCGTCCGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTcc                                                                                                           <  2:1801561/234‑1 (MQ=255)

                                                                                                                                cacgcccgcgcAGAAAGTTTGGGGTGGGGGGCAAGTTTAATTCAGGGGCGCTGTGTTGGGA‑ATACCAAAAACGGTG‑AAG‑GGTTGCGGG‑CCCCGCTTTCTT‑GCTAATTACCCCCAGCGGGCCACCGTCTTTTTGGCCCGCCCGGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCTTTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTcc                                                                                                           <  2:122634/231‑1 (MQ=255)

                                                                                                                                  gACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGt                                                                                                        >  1:1487831/1‑239 (MQ=255)

                                                                                                                                   aCCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGctggctgg                                                                                                                                                                                     >  2:536052/1‑161 (MQ=255)

                                                                                                                                   aCCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGctggctgg                                                                                                                                                                                     <  1:536052/161‑1 (MQ=255)

                                                                                                                                   aCCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGGCAAACCGCCGCCTTCAggt                                                                                                       >  1:1214749/1‑237 (MQ=255)

                                                                                                                                        cgcAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCa                                                                                                  >  1:192626/1‑239 (MQ=255)

                                                                                                                                        cgcAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCCCTTCCAGTTTTTCa                                                                                                  >  1:361689/1‑239 (MQ=255)

                                                                                                                                        cgcAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGCCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGCATTTTCTCTCTGCCCAACCCCCCGTTCACGTTTTTcc                                                                                                  >  2:1302782/1‑238 (MQ=255)

                                                                                                                                                  cTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCACGTCTGCCAAACCCCCGCTTTCCGGTTTTCAACTCGGTTag                                                                                        >  2:799675/1‑238 (MQ=255)

                                                                                                                                                     ggCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTgg                                                                                    >  1:1909863/1‑239 (MQ=255)

                                                                                                                                                     ggCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTgg                                                                                    >  1:135104/1‑239 (MQ=255)

                                                                                                                                                     ggCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGGTTTTCAACT‑GGTTAAGTgg                                                                                    >  1:1276522/1‑239 (MQ=255)

                                                                                                                                                        tgctgGCTAAGTTATATTCGGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCGGGCTGG‑CACAGC‑TTCCT‑TCTAAATATCCCCAGCGCGCCCCCTGCATTTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGAt                                                                                  <  1:1285330/238‑1 (MQ=255)

                                                                                                                                                        tgcggGCTAATTTATATTCAGGGGCGCTGTTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATACCCCCAGCGCCCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGAt                                                                                  <  1:393408/238‑1 (MQ=255)

                                                                                                                                                          ctgGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTTAGGGGGtt                                                                                 >  1:1746404/1‑237 (MQ=255)

                                                                                                                                                          ctgGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGGTAAGTGGaat                                                                                 >  1:199222/1‑235 (MQ=255)

                                                                                                                                                          ctgGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCCTCCAGGTTTTCAACT‑GGTTAAGTGGATTg                                                                                >  1:350045/1‑238 (MQ=255)

                                                                                                                                                                 aGTTATATTCAGGGGCGCTGGTTAGGAA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCAAAATATCACCAGCGCGCCCCCTGCATGTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGt                                                                        <  1:748157/239‑1 (MQ=255)

                                                                                                                                                                       atTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTTAGTGGATTGCTGTGGGTCAGCGt                                                                  >  1:651592/1‑239 (MQ=255)

                                                                                                                                                                             gggCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTTAACT‑GGTTAAGGGGGTTGCTGTGGGGCAGCGGGGGaa                                                             >  1:681531/1‑238 (MQ=255)

                                                                                                                                                                             gggCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGGCAGCGTGGTaa                                                             >  1:783922/1‑238 (MQ=255)

                                                                                                                                                                             gggCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAAATTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGGTAAGGGGATTGCTGTGGGTCAGCGTGGTaa                                                             >  1:958304/1‑238 (MQ=255)

                                                                                                                                                                             gggCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCCGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTCCCAAACCGCCCCTTCCCCCTTTTCAACT‑GGGTTAGTGGATTGGCGTGGGTTAGCGTGGTaa                                                             >  1:380391/1‑238 (MQ=255)

                                                                                                                                                                             gggCGCTGGTTAGGGA‑AAACA‑AAACCGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATACCCCCGGCGCCCCCCCTGCATGTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTaa                                                             <  1:956365/238‑1 (MQ=255)

                                                                                                                                                                             gagcgcTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCAACTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCACACCGCCGCTTCCAGTTTTTCAACT‑GGGTAAGTGGATTGCTGTGGGTCAGGGTGGTaa                                                             >  1:779019/3‑238 (MQ=255)

                                                                                                                                                                              ggCGCTGGTTAGGGA‑ATCCC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCCCCAGCGCGCCCCCTGCATTTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAAc                                                            <  1:435480/238‑1 (MQ=255)

                                                                                                                                                                                cgcTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAATCATGGCGGGAATTTCCGGTCTGCCAAACTCCCGCTTCCCGTTTTTCCACT‑GGGTAAGTGGATTGCTGTGGGTCAGCGTGGGAACCAg                                                         >  1:1030981/1‑239 (MQ=255)

                                                                                                                                                                                cgcTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGGTTAGTGGATTGCTGTGGGTCAGCGTGGTAAACAg                                                         >  1:696574/1‑239 (MQ=255)

                                                                                                                                                                                  cTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGa                                                                                                                                                                                    <  1:370042/115‑1 (MQ=255)

                                                                                                                                                                                  cTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCCGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGa                                                                                                                                                                                    >  2:370042/1‑115 (MQ=255)

                                                                                                                                                                                  cTGGTTAGGGA‑ATACC‑AAAACGGGGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATAACCAGCGCGCAACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCGGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAGTTTTCGGTCTGCCAAACCCCCCCTTCAAGTTTTTCAAAT‑GGGTAAGGGGGTTGCGGTGGGTCACTGGGGGAACCGGtt                                                       >  2:1833995/1‑239 (MQ=255)

                                                                                                                                                                                   tGGTTGGGGA‑ATACC‑AAAACGGTGAAAG‑GCGGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCCCCAGCGCGCCCCCTGCTTGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGtt                                                       <  1:1678492/238‑1 (MQ=255)

                                                                                                                                                                                              aTACC‑AAAGCGG‑GAAAG‑GGGGGGTGGCCACACC‑TTCCG‑GCAAATTCCCACCGCCGCCCCCCCTGTTTTTTTCCCCGCCACGGTCTGTTGGCGTGTCTGGCTGGACGTTTTCTTGCATTTGTCCGTCCGCTGCTGCCACCCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGcc                                            <  2:24477/239‑1 (MQ=255)

                                                                                                                                                                                                ccc‑AAACGGGTGAAAG‑GCTGGCGGG‑CCCAGC‑TTCCT‑GCAAAATATCCCCGGCGCGCCCCCTGCATTTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCa                                                                      <  1:306108/210‑1 (MQ=255)

                                                                                                                                                                                                ccc‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGT‑TCCCT‑GTTAAATATCCCCAGCGCGCCACCTGCTTGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCtt                                          <  1:769167/238‑1 (MQ=255)

                                                                                                                                                                                                aCC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCCTGGCGGGAATTTCCGGTCTGCCAAACCCCCGCTTCCCGTTTTTCACCT‑GGGTATATGTGTTGCTGTCGGTCAGCGCGGGTACCAGTTTTGGcgctgtctt                                          >  2:894321/1‑231 (MQ=255)

                                                                                                                                                                                                aCC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCTGGTCTGCCACAACCCCGCCTCCCCTTTTTCAACT‑GGTTAAGTGGGTTGCTGTGGGTCAGCGGGGGCAACAGCTTTGGCTCTGccct                                          >  2:936536/1‑237 (MQ=255)

                                                                                                                                                                                                aCC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGGCGCCTCCAGGTTTTCTACT‑GGTTAAGGGGGTTGTGGGGGGGGAGCGTGGGAAACAGTTTTTGGTTTGCCtt                                          >  2:955498/1‑239 (MQ=255)

                                                                                                                                                                                                aCC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCtt                                          >  1:1586529/1‑239 (MQ=255)

                                                                                                                                                                                                aCC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGGTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCtt                                          >  1:1800271/1‑239 (MQ=255)

                                                                                                                                                                                                 cc‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGGGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTa                                         >  1:1632536/1‑239 (MQ=255)

                                                                                                                                                                                                  cccaaaCGGGGGAAG‑GGCGGGTGG‑CCCCGC‑CTCCTGGTTAAATCCCCCCGGCGGCCCCCCTGCTTTTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGTTGGACGTTTTCTTGCATTTGTCCGTCCGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCtt                                          <  2:192626/236‑1 (MQ=255)

                                                                                                                                                                                                   aaaacCGGTGAAAG‑GGTGGCTGG‑ACCGGC‑TTCCT‑GCAAAATATCCCCGGCGCGCCACCTGATTGTTGGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTaa                                                             <  1:1492027/217‑1 (MQ=255)

                                                                                                                                                                                                                      gctgg‑cACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGGATTTCCCGGCCGCCCAAACGCCGCTTCCACTTTTTCCACC‑GGTTAAGTGGGATGCCGTGGGTCAGCGTGGGAAACCGTTTTTGGTCAGCCTTAAGTAAGATTCcgttcgttt                      >  2:1423627/1‑238 (MQ=255)

                                                                                                                                                                                                                      gctgg‑cACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGAtt                                >  1:669845/1‑229 (MQ=255)

                                                                                                                                                                                                                      gctgg‑cACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTa                      >  1:1298045/1‑239 (MQ=255)

                                                                                                                                                                                                                            cacaGT‑TCCCG‑GCTAAATATCCCCGGCGCGCCACCTGCTTGTTTGGCCGCCACGGTCTGCTGGGGCTGCTGGCGGGGCGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACg                  <  1:1569270/238‑1 (MQ=255)

                                                                                                                                                                                                                              caGC‑TCCTT‑GCTAAATATCCCCAGCGCGCCACCTGCATGTTTGCCCGCCACGGTCTGCGGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCa               <  1:1487922/239‑1 (MQ=255)

                                                                                                                                                                                                                                 c‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTTTGCCAAACCCCCCCTTCCCGTTTTTCAACT‑GGTTTAGTGGGTTGCTGGGGGTACGCGGGGTAACCCGTTTTGTCTATGCCTTAAGTATGGTTCCGGTCGTTAAACGCCagta            >  2:1075928/1‑236 (MQ=255)

                                                                                                                                                                                                                                 c‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGt                                                                        >  1:252727/1‑179 (MQ=255)

                                                                                                                                                                                                                                 c‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGa            >  1:1447251/1‑239 (MQ=255)

                                                                                                                                                                                                                                   ttCCG‑GATAAATACCCCCGGCGCCCCCCCTGCTTTTTTGACCGCCGCGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGGTTCCGTTCGTTAAACGCCAt              <  1:156605/236‑1 (MQ=255)

                                                                                                                                                                                                                                   tcctt‑GCTAAATATCCCCAGCGCGCCCCCGGCATTTTTGCCCGCCCCGGTCTGCGGGTGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGa            <  1:1032294/234‑1 (MQ=255)

                                                                                                                                                                                                                                   tcccT‑GCTAAATACCCCCAGCGCCCCCCCGGCATTTTTGCCCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGTTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATg             <  1:1884406/235‑1 (MQ=255)

                                                                                                                                                                                                                                    tCCT‑GCTAAATATCCCCAGCGCGCCCCCTGCATTTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAg          <  1:1302782/239‑1 (MQ=255)

                                                                                                                                                                                                                                            aaaTACCCCCCGCGCCCCCCTTGCGTTTGTGCCCGCCCTGGTCTGCTGGCGCTGCGGGCTGGACGTTTTCTGGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGTAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGt   <  2:280018/239‑1 (MQ=255)

                                                                                                                                                                                                                                             aaTATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGTa  >  1:629462/1‑239 (MQ=255)

                                                                                                                                                                                                                                             aaTATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCCTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGTa  >  2:1849969/1‑239 (MQ=255)

GTTTGCCACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATT‑CTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGA‑ATACC‑AAAACGGTGAAAG‑GCTGGCTGG‑CACAGC‑TTCCT‑GCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACT‑GGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGTA  >  NC_007779/3152314‑3152782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`