| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,442,749 | A→G | 100% | Q91Q (CAA→CAG) | thiE → | thiamine phosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 3,442,749 | 0 | A | G | 100.0% | 614.6 / NA | 173 | Q91Q (CAA→CAG) | thiE | thiamine phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (69/104); total (69/104) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 173 total aligned reads displayed.
ACTGTACCCGGTGGTGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAAG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTGGCGATTGGCGGTAT > NC_007779/3442518‑3442976 | aCTGTACCCGGTGGTGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCAcc < 1:629880/238‑1 (MQ=255) tACCCGGTGGTGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGGAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCGGGCGATCCAACATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAGGATTTGCGGG‑CCAcccact > 2:424796/1‑234 (MQ=255) tACCCGGTGGTGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGGGATCCAGCATCAGGCGGATGG‑CGGCCAATTGGGGCAGGGAGATTTGGAGG‑CCACCGacc > 2:606638/1‑236 (MQ=255) tACCCGGTGGTGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCCTCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGAtc > 1:1673648/1‑238 (MQ=255) ggtggtGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGCTCAAGCATCAGGCGGATTG‑CGTCCATTTGGGGCAGGAAGGTTTGTAGG‑CCACCCATCTCa‑aat > 2:1674667/1‑237 (MQ=255) ggtggtGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑At > 1:1111575/1‑238 (MQ=255) gACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCCGGGCCGCCGCTCTAACGCGCGATTGTTTATCAACGATTACTGGCGGCCGGCGGTCAAGCATCAGGCGTATGG‑CCGCCCTTTTGGGGAGGAAGATTTGCAGG‑CCCCCCAACTCC‑ATGCCCTcc > 2:1346279/1‑238 (MQ=255) cGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGCTCAAGCATCAGGCGTATGGCCGTCC‑TTTTGGGCAGGGAGGATTGCCGG‑CCCCCGAACCCA‑ATGCCCACcgcccc > 2:1188054/1‑235 (MQ=255) ttACAGTGGATTGAACGTCTGTTGGATGCAGGGGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGGGATGAAGAGGTGGAAGCCGATGTCGGGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCgg < 2:881742/237‑1 (MQ=255) gTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCgg < 1:490802/238‑1 (MQ=255) ggATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCt < 1:646931/238‑1 (MQ=255) aTCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑g > 1:1683596/1‑239 (MQ=255) tCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑gg < 1:887061/239‑1 (MQ=255) aaCGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTg > 1:1289035/1‑239 (MQ=255) gTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGGGATCAAGCATCCGGCGGATGG‑CCTCCATTTGGGGCAGGAAGACTTGCAGG‑CCACCGAT‑TCACAAGCCGTCCTCGCGGCAGGCCTGC‑GGCCGGGc > 2:729388/1‑239 (MQ=255) gTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGGGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGAACAAGCATCAGGCGCATGG‑GGGCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTgggg > 1:917480/1‑238 (MQ=255) tGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAAGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCgggggggt > 1:457465/1‑235 (MQ=255) gTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑ttt < 1:1888124/239‑1 (MQ=255) ggATGCAGGCGTATGTACTCTCCACGTACGCATCAAAGATCGGCGCGAGGAAGAGGTGGAAGCCGATGTCGTGGCGGCGATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGa < 2:654692/239‑1 (MQ=255) tGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGaca < 1:1640598/238‑1 (MQ=255) tGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAAGATCAGGCGTATTG‑CGTCCATTTTGGGCCGGGAGATTTTCAGGCCCACCGTTTAAA‑CTCCCACCCGCGCGCCA‑GCCGGCGGGCTGGGCggtctcaca > 2:1399630/1‑231 (MQ=255) ggaGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCAATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGAcaca < 1:754978/237‑1 (MQ=255) gCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGAcaca < 1:903918/239‑1 (MQ=255) gCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGAcaca < 1:556810/239‑1 (MQ=255) cAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACAt > 1:962250/1‑239 (MQ=255) cggtacTTTCGAGATTCGCATCAAAGATCGGCGCGGTAAAGAGGTGGAAGCCGCTTGCGTGTCGGCAATTGCGCGGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACTCATGACG‑ata < 2:78240/237‑1 (MQ=255) ccgtacTCTCCAGCTAGGCGTCAAGGATGGGCGCGATGAAGGGGTGGAAGCCGATGGCGGGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ata < 2:1198351/238‑1 (MQ=255) cgtacTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑atat > 1:748999/1‑239 (MQ=255) tcCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGGTCAAACCACCGGCGTATGG‑CGTCCATTTGGGGGCGGAAGATTTGCAGG‑GCCCCGGTCCCA‑ATGACATCCGCGCGGCAGGCCTGC‑GGCGGGGCG‑TGTCGGCACATGACG‑ATTTGGgaagc > 2:295127/1‑237 (MQ=255) tcCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑AAATGGCAAt > 1:801527/1‑238 (MQ=255) cAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGGAATCg > 1:588904/1‑238 (MQ=255) tcggCATGAAGGAGCGGCGCGATGAGGAGGTGGAAGCCGTTGTCGTGGCGGAAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGt < 2:555258/235‑1 (MQ=255) cGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑GCCCCGCTTTCC‑ATTCCATCCGCCCGGCCGGGCCGC‑GGCTGGGCG‑TTTCGCCACCCGACG‑AACTGGGAATCgcgctgcc > 2:49141/1‑232 (MQ=255) cATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGTTGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCCATCAAACATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGGTTTGCCGG‑CCCCCGCTCTCA‑ATCCCCCCCCCGCGGCCGGGCCGC‑GGCCGGGCG‑GTTCGCACCATGAAC‑ACATGGAAAACggccgcccc > 2:312053/1‑230 (MQ=255) cATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTcgcg > 1:1734507/1‑238 (MQ=255) aTCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCt < 1:1809231/239‑1 (MQ=255) aGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CCTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGgcag < 1:1399630/239‑1 (MQ=255) tCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGgcagca < 1:1467104/238‑1 (MQ=255) tCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGgcagca < 1:1729866/238‑1 (MQ=255) tCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGgcagca < 2:748999/238‑1 (MQ=255) ggCGGGATGAAGTGGTGAATGCGGATGTCTTGGCGGCAATTGGGCTGGGCCTCCTCTATAACGCGCGATTGTTTATCAACGACTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTGCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 2:587492/239‑1 (MQ=255) ggCGCGATGAGGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 1:205081/239‑1 (MQ=255) ggCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGGTCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGGAGATTTTCAGG‑CCACCGATCTCA‑ATGCCCTCCGGCCGGCAGGCCCGC‑GGCTGGGGGTTTTCGCCCCAT‑ACG‑AAAAGGAAAACGACCTCCCGCTGgcaggccc > 2:1275767/1‑234 (MQ=255) ggCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCCGCACg > 1:217549/1‑238 (MQ=255) ggCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACg > 1:709464/1‑238 (MQ=255) ggCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 1:1346279/239‑1 (MQ=255) ggCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 1:1462539/239‑1 (MQ=255) ggCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 1:1549982/239‑1 (MQ=255) ggCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 1:367740/239‑1 (MQ=255) ggCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 1:338379/239‑1 (MQ=255) ggCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 1:198964/239‑1 (MQ=255) ggCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 1:1798502/239‑1 (MQ=255) gcgcGATGAAGAGGTGGAAGCCGATGTCGTGGCGGAAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 2:1792811/238‑1 (MQ=255) gggaaTGAAGAGGAGGAGTGCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGc < 2:204889/233‑1 (MQ=255) aTGAAGGGGTGGAAGCCGATGTCGGGGCGGCAATTGCGCGGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCctc < 2:1101530/238‑1 (MQ=255) agagGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTtat‑a < 1:650767/239‑1 (MQ=255) ggTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTat‑at < 1:1788115/237‑1 (MQ=255) tGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGGCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGAACTCA‑ATGCCACCCGCCCGGCCGGCCCGC‑GGGCGGGCG‑GTTTGCACCACGACGCACTCGGAAATCGACG‑CCCGCCGGTAGCCCGGCCCTCTtaaaaccgc > 2:392597/1‑232 (MQ=255) gAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATcgc > 1:833694/1‑236 (MQ=255) aaGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCt < 1:166807/238‑1 (MQ=255) gccgccGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTTC‑GGGCGGGCG‑TTTCGACACATTACG‑ATATGTGAATCGACGTCCCGCTGGCAGCACGCCCCTCTTTTAACCGCCCGGGGGC‑TGTGTTGCCGCCGCGaaaccaaacg > 2:1223200/1‑238 (MQ=255) cgccgcTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGAt < 1:1188054/239‑1 (MQ=255) cgccgcTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGAt < 1:1648479/239‑1 (MQ=255) tataACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCtt < 1:1041876/238‑1 (MQ=255) aaCGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGc < 2:709464/239‑1 (MQ=255) aCGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCa < 2:800690/239‑1 (MQ=255) cgATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCa < 1:150199/239‑1 (MQ=255) cgATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCa > 1:1664096/1‑239 (MQ=255) gATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCa < 1:723275/238‑1 (MQ=255) gATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCa < 2:811056/238‑1 (MQ=255) gATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCa < 1:773655/238‑1 (MQ=255) gATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCa < 1:1167072/238‑1 (MQ=255) gATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAg > 1:1253069/1‑239 (MQ=255) tGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAgggg < 1:1138290/239‑1 (MQ=255) aCGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATTG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCCGGGCG‑TTTCGACACATGACG‑AAATGGAAATCGACGGCGCGCTGGCCGCACGCCCCCCTTAT‑ATCGCGCCGGGACATGTGTTCCCGCCGC‑ACAACAAACAGATGCCTTCTGCACCGCCGGGGCGGGGACa > 2:1887313/1‑238 (MQ=255) cGATTACTGGCGGCTGGCGATCAAGCATCTGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACa > 1:1753602/1‑237 (MQ=255) aTTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGAGTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TGTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCgcgc < 2:162574/174‑1 (MQ=255) tACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGc < 1:1038476/239‑1 (MQ=255) gATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAg < 1:1781596/238‑1 (MQ=255) gATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAg < 2:1635585/238‑1 (MQ=255) tCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGa < 1:1307021/239‑1 (MQ=255) aTCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCg < 1:295127/239‑1 (MQ=255) aTCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCg < 1:1780184/239‑1 (MQ=255) aTCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCg < 1:470176/239‑1 (MQ=255) aTCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCg > 1:1229761/1‑239 (MQ=255) ggCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCCTGGTGAGCGACcggcggggt > 2:472670/1‑236 (MQ=255) gCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTg < 1:1331510/187‑1 (MQ=255) gTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTAt < 1:419798/238‑1 (MQ=255) tCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTtat‑a > 1:305185/1‑129 (MQ=255) tCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGc > 2:1524489/1‑202 (MQ=255) tCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGc < 1:1524489/202‑1 (MQ=255) tCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTg > 1:1936044/1‑239 (MQ=255) tCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTg > 1:572499/1‑239 (MQ=255) tCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTg > 1:984550/1‑239 (MQ=255) tCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTg > 1:1534565/1‑239 (MQ=255) tCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTg > 1:1094643/1‑239 (MQ=255) tCCATTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTg > 1:1575915/1‑239 (MQ=255) aTTTGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTGGCg > 1:1714727/1‑239 (MQ=255) tttGGGGCAGGAAGATTTGCAGG‑CCACCGATCTCA‑AGGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTGGCGa < 1:1595573/239‑1 (MQ=255) ggCAGGAAGATTTGCAGG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTGGCGATTgg < 1:472670/238‑1 (MQ=255) | ACTGTACCCGGTGGTGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGG‑CGTCCATTTGGGGCAGGAAGATTTGCAAG‑CCACCGATCTCA‑ATGCCATCCGCGCGGCAGGCCTGC‑GGCTGGGCG‑TTTCGACACATGACG‑ATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTAT‑ATCGCGCTGGGACATGTGTTCCCGACGC‑AAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTGGCGATTGGCGGTAT > NC_007779/3442518‑3442976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |