BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,541,864	A→G	9.4%	E389G (GAA→GGA)	rhaA →	L‑rhamnose isomerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,541,864	0	A	G	9.4%	535.6 / 2.7	192	E389G (GAA→GGA)	rhaA	L‑rhamnose isomerase
Reads supporting (aligned to +/- strand): ref base A (49/118); new base G (22/2); total (71/121)
Fisher's exact test for biased strand distribution p-value = 4.64e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 196 total aligned reads displayed.

GTGAGATTGTGCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACAGGTCGGCAA  >  NC_007779/3541627‑3542099

gTGAGATTGTGCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGAATACACTGCGCCTCTGGCGCCGCTGGAAGAGCAGAAACCGTTGCCGTGGCAGGCGGTTTGGGaa                                                                                                                                                                                                                                                     >  1:77326/1‑239 (MQ=255)

 tGAGATTGTGCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGaa                                                                                                                                                                                                                                                     <  2:1582274/238‑1 (MQ=255)

  gagaTTGTGCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGa                                                                                                                                                                                                                                                      <  2:734061/236‑1 (MQ=255)

    gaTTGTGCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATg                                                                                                                                                                                                                                                  <  1:1180832/238‑1 (MQ=255)

         tgCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACCGCGCGGCTGGCACTTCTGGGAGAGCAGAAATCGGTGCCGTGGGAGGCGGGCTGGGGACTGtctcgt                                                                                                                                                                                                                                            >  2:1882880/1‑234 (MQ=255)

               aCGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTCCACTGCGCGGCTGGCACTGCTGGAAGAGCAGGAATCGTTGGCGTGGCGGGGGGGTTCGGGAATGGATTGcccagg                                                                                                                                                                                                                                       >  2:948294/1‑234 (MQ=255)

               aCGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGGAATGGATTGCCAAC‑g                                                                                                                                                                                                                                      >  1:1808124/1‑238 (MQ=255)

                    cTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGa                                                                                                                                                                                                                               <  2:1012060/239‑1 (MQ=255)

                      gTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑Ta                                                                                                                                                                                                                            <  1:1698657/239‑1 (MQ=255)

                             cGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCcagc                                                                                                                                                                                                                     <  1:414118/239‑1 (MQ=255)

                                    atatCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAg                                                                                                                                                                                                               <  2:1360905/238‑1 (MQ=255)

                                     tatCGGCCTTGGCTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCg                                                                                                                                                                                                             <  2:1795160/239‑1 (MQ=255)

                                     tatCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGGAATGTATTGCCAAC‑G‑GCACGA‑TACGCCAGCAGGGAGCg                                                                                                                                                                                                             >  1:199154/1‑239 (MQ=255)

                                      atCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGGAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCCGGTAGCGa                                                                                                                                                                                                            >  1:1720406/1‑239 (MQ=255)

                                       tCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGaa                                                                                                                                                                                                           <  1:1749398/239‑1 (MQ=255)

                                          gCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGGAACGTATTGCCAAC‑G‑TCACGA‑AACGCCCGCAGGGAACGAATgg                                                                                                                                                                                                        >  1:923609/1‑239 (MQ=255)

                                          gCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATgg                                                                                                                                                                                                        >  1:124834/1‑239 (MQ=255)

                                              tGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACCGCGCGGCTGGCGCTGCTGGAAGAGCAGAAATCGTTGCCGCGGCAGGCGGCTCGGGGCATGGATTGCCAAC‑G‑AACCGA‑GACGCCACCCGGGATCGAAGGGC‑ggg                                                                                                                                                                                                   >  2:1838372/1‑239 (MQ=255)

                                                 cttcttCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGgaga                                                                                                                                                                                                <  2:1240206/239‑1 (MQ=255)

                                                   tcttcGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGGCTGGCACTGCTGGGAGAGCAGAAATCGTTGCCGTGGCAGGCGGGCTGGGGCATGTATTGCCAAC‑G‑TACCGA‑AACGCCCGCAGGGAGAGAAAGGG‑Tgtg                                                                                                                                                                                                  >  2:1701720/1‑233 (MQ=255)

                                                     ttcGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGaa                                                                                                                                                                                                           <  2:1262699/225‑1 (MQ=255)

                                                     ttcGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑t                                                                                                                                                                                           <  2:1911563/239‑1 (MQ=255)

                                                     ttcGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑t                                                                                                                                                                                           >  1:271165/1‑239 (MQ=255)

                                                     ttcGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑t                                                                                                                                                                                           <  1:290507/239‑1 (MQ=255)

                                                      tcGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑Tg                                                                                                                                                                                          <  1:748137/239‑1 (MQ=255)

                                                          tGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGGGCTTAAACCGCGCGGCCGGCACCCCTGGGAGAGCAGAAAACGTTGCCGGCGCCGGCGGGCGGGGGAACGGAATACCCAC‑G‑GCACGA‑CACGCCCGGCGGGAGCGGACGGG‑TGGagaggggggggg                                                                                                                                                                                       >  2:792382/1‑231 (MQ=255)

                                                                      ccGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑agaaag                                                                                                                                                                        <  1:1375081/239‑1 (MQ=255)

                                                                       cGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGGCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑agaaaga                                                                                                                                                                       >  1:429501/1‑239 (MQ=255)

                                                                       cGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGGTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGc                                                                                                                                                                                         <  1:901481/223‑1 (MQ=255)

                                                                        gCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGGCTGGGAAATGTATTGCCCAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGGGAGCC‑GGGGGGCTTAT‑G‑agaaagaa                                                                                                                                                                      >  1:1486583/1‑239 (MQ=255)

                                                                         cATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGGAGCGAATGGC‑TGGAGAGCG‑CGCGGGCTTAT‑G‑Agaaagaaa                                                                                                                                                                     >  1:308971/1‑239 (MQ=255)

                                                                            tGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGGATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAAttt                                                                                                                                                                  >  1:1631514/1‑239 (MQ=255)

                                                                                      gTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑Tcgcc                                                                                                                                                        >  1:627669/1‑238 (MQ=255)

                                                                                      gTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑Tcgcc                                                                                                                                                        <  2:1631514/238‑1 (MQ=255)

                                                                                       tcaaagctatccGCAATAAGAAATAAGCCCTGCGCCGTGCGTTGCTGGAACCTACCGCTGCGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCATCAGGTAGCGAATGGC‑TGGAGAGCG‑CGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑Acgccg                                                                                                                                                       <  2:730106/227‑1 (MQ=255)

                                                                                       tCATTGGTACACGCAATATGAAACAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑Tcgccg                                                                                                                                                       <  2:457585/238‑1 (MQ=255)

                                                                                       tCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑Tcgccg                                                                                                                                                       <  2:858872/238‑1 (MQ=255)

                                                                                       tCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑Tcgccg                                                                                                                                                       <  1:1879082/238‑1 (MQ=255)

                                                                                                cacGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGTTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGGAGAAATCGTTGCCGTGGCAGGGGGGCTGGGGAATGGTTTGCCCAC‑G‑GCACGA‑TACGCCAGCAGGTGGCGAAAGGC‑TGGGGAGCG‑GGGGGGGTTAT‑G‑AGAAAGAAAATTTTAG‑TGGCCGCGGGGaaaaa                                                                                                                                             >  2:366826/1‑237 (MQ=255)

                                                                                                cacGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGGAAac                                                                                                                                              >  1:1044601/1‑238 (MQ=255)

                                                                                                cacGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACCGCTGGAAGAGCAGAAATCGTTGCCGTGGCCGGCGGGCTGGGGAATGTAATGCCCAC‑G‑TCACGA‑AACGCCAGCAGGTAGCGGATGGG‑CGGAGAGCGCGGGGGGCTATT‑T‑GGAAGGAAATTTTGA‑‑TCGCCCTGGGGaaaaa                                                                                                                                             >  2:1090616/1‑237 (MQ=255)

                                                                                                   gCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACt                                                                                                                                           >  1:1294822/1‑238 (MQ=255)

                                                                                                   gCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACt                                                                                                                                           >  1:1118190/1‑238 (MQ=255)

                                                                                                       tatGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGGAAACACTGCCgg                                                                                                                                      >  1:1617521/1‑239 (MQ=255)

                                                                                                        atGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCAAAC‑G‑GCCCGA‑TAAGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑AGCGGGATTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGa                                                                                                                                     >  1:1102476/1‑239 (MQ=255)

                                                                                                         tGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGAt                                                                                                                                    <  1:1586638/239‑1 (MQ=255)

                                                                                                             aaaaGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGCTTTCCCTGCGCCTCCTGCCCCTCTGGGAGAGCAGAAATCGGTGCCGGGGCAGGGGGGCTTGGACATGTTTTTGCAAC‑GCTCCCGT‑AACCCCGGCAGG‑AGCCAACGGCGGGGAGTCCG‑TCGGGGCTACT‑G‑A‑AAAGAAATTTTTAGACCCCCGCGGGTAAACCCGGCCGGagtgg                                                                                                                                 >  2:118746/1‑235 (MQ=255)

                                                                                                             aaaaGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTTCTGGAAGAGCAGAAATCGCTGCCGTGGCAGGCGGGCTGGGGAATGTATTGCCCACGG‑TCA‑GG‑TACGCCCGCAGGTAGCGGATGGC‑GGGAGAGGG‑GGCGGGGCTGT‑GTGGAAAGAAATTTTCAG‑TCGCC‑CGGGGAAACAACGCCggggtccg                                                                                                                                >  2:712731/1‑233 (MQ=255)

                                                                                                               agggcgtggcgcgtggggTGCTGGTACCGCCCGCTGAGCGGCGCAAGGTGGAAGCGGCGGGCGGTTGCGCTGCGGGTCTGGCACTGCTGGAAGAGCAGAACTCGTTGGCGTGGCAGGCGGGCTGGGAAATGTATTGTCACC‑G‑TCGCGA‑TACGCCAGCAGGTAGGGAATGGA‑TGGAGATCG‑TGAGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCGGCGGGGAAACGCTGCCGGATgcggcg                                                                                                                              <  2:923609/229‑1 (MQ=255)

                                                                                                               aaGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATgcggc                                                                                                                               >  1:741533/1‑238 (MQ=255)

                                                                                                               aaGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGGAAACACTGCCGGATgcggc                                                                                                                               >  1:1691959/1‑238 (MQ=255)

                                                                                                                 gCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑GGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGcgcg                                                                                                                            >  1:624918/1‑239 (MQ=255)

                                                                                                                   ccTGGTGCGTGAGTGTTTGGAACCGACCCCTGAGCTGCGCACGCTGGCAGCGGCTGGCGATTACCCTGCGCGTCTGGCACTGCTTGAAGGGCAGAAATCGTTGCCGTGTCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TCCGGCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑CCGCCTCGGGTAAACACTGCCGGATGCGGcgcg                                                                                                                            <  2:1219528/237‑1 (MQ=255)

                                                                                                                   ccTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGcgcg                                                                                                                            <  1:941470/237‑1 (MQ=255)

                                                                                                                   ccTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGa                                                                                                                           <  1:1440803/238‑1 (MQ=255)

                                                                                                                   ccTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGa                                                                                                                           <  1:975465/238‑1 (MQ=255)

                                                                                                                     tgctgcGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAg‑cg                                                                                                                       <  1:366826/239‑1 (MQ=255)

                                                                                                                      gctgcGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAg‑cgc                                                                                                                      <  1:1166515/239‑1 (MQ=255)

                                                                                                                             gcgtTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGGAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATcc                                                                                                               >  1:724010/1‑239 (MQ=255)

                                                                                                                                   cTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGcc                                                                                                                                                                                                                                           <  1:1313893/118‑1 (MQ=255)

                                                                                                                                    tGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTa                                                                                                         <  1:242601/238‑1 (MQ=255)

                                                                                                                                       aaCCTACCGCTGCGCTGCGCAAGCTGGAAGAGGCGGGCGATTACACGGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACgg                                                                                                      <  2:1327977/238‑1 (MQ=255)

                                                                                                                                         ccTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTc                                                                                                   <  1:867669/239‑1 (MQ=255)

                                                                                                                                            aCCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGc                                                                                                <  1:1902966/239‑1 (MQ=255)

                                                                                                                                             ccGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGCTTAAAGTGGGCGTCTGGCAACGGTGGGAGAGCAGAAAACGTTGGCGTGGCAGGCGGGCTGGGGAAAGCAAGGGCCAA‑G‑TGAAGC‑AAAGCCAGCAGGGGGGGAATGGG‑CGGAGGGGG‑GGGGGGGTGTT‑T‑GGAAAGAAAACTTTAG‑TAGCCGCCGGTTGAAACCGCCGGGTGCGGGGCGGGCCGCCTAAT‑CGGCCTGCggggtggga                                                                                               >  2:150620/1‑233 (MQ=255)

                                                                                                                                             ccGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCa                                                                                               >  1:819958/1‑239 (MQ=255)

                                                                                                                                              cGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCaa                                                                                              <  1:587754/239‑1 (MQ=255)

                                                                                                                                              cGCTGAGCGGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAAGGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCaa                                                                                              <  2:1789974/239‑1 (MQ=255)

                                                                                                                                                      tGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGt                                                                                       <  2:627669/238‑1 (MQ=255)

                                                                                                                                                        cgcAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGGCTGGGAAATGGATTGCCAAC‑G‑TCACGG‑TACGCCAGCCGGGAGGGAAAGGG‑TGGGGGGCG‑GGGGGGGTTATGG‑GGAAAGAAA‑TTTGGG‑TCGGCGCGGGGAAAAACAGGCGGGTGGGGGGGCAG‑CGGCTTATCCGGGCTACGGGGCGGCAAAAggttggag                                                                                    >  2:193506/1‑232 (MQ=255)

                                                                                                                                                                  aaGCGGCGGGCCATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGGCCGGGGACTGGATTGCCAAA‑G‑TCCAGA‑AACGCCCGGTGGGAGAGAATGGC‑GGGGGACCG‑TGGGGGCTTGT‑G‑GGGCAGAAATTTTTAG‑TCGCCACGGGGAAACACCGTCCGGGGCGGCGCTAG‑CGGCTTTTACGGCCCTCGCGTCGGGAACAGGTGGAGGGCGGATacaa                                                                          >  2:754014/1‑236 (MQ=255)

                                                                                                                                                                        cgggcgATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGa                                                                     <  1:192587/238‑1 (MQ=255)

                                                                                                                                                                                  cacTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGGCGCa                                                           >  1:748742/1‑238 (MQ=255)

                                                                                                                                                                                   acTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATc                                                         <  1:128407/239‑1 (MQ=255)

                                                                                                                                                                                     tGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACggg                                                                                                     <  1:363402/193‑1 (MQ=255)

                                                                                                                                                                                       cgcgTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGaa                                                                                                                                                                                                           <  1:556614/95‑1 (MQ=255)

                                                                                                                                                                                       cgcgTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGaa                                                                                                                                                                                                           >  2:556614/1‑95 (MQ=255)

                                                                                                                                                                                       cgcgTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATcc                                                                                                               <  2:430777/181‑1 (MQ=255)

                                                                                                                                                                                             tGGCACTGCTGGATGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAACTTTGAG‑TCGCCGCGGGTAAGCACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCattga                                                <  1:1412583/238‑1 (MQ=255)

                                                                                                                                                                                                    gctgGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGa                                        <  2:942531/239‑1 (MQ=255)

                                                                                                                                                                                                      tgGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATg                                      <  1:456418/239‑1 (MQ=255)

                                                                                                                                                                                                       ggAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGc                                     <  1:324253/239‑1 (MQ=255)

                                                                                                                                                                                                          agagCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGc                                  >  1:489876/1‑239 (MQ=255)

                                                                                                                                                                                                             gCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCg                                                                >  1:1211771/1‑206 (MQ=255)

                                                                                                                                                                                                             gCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCg                                                                <  2:1211771/206‑1 (MQ=255)

                                                                                                                                                                                                               aGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACaa                              <  1:1853316/238‑1 (MQ=255)

                                                                                                                                                                                                                  aaTCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGc                          <  2:271165/239‑1 (MQ=255)

                                                                                                                                                                                                                      gTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTa                      >  1:1529275/1‑239 (MQ=255)

                                                                                                                                                                                                                        tGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCa                                                                                               <  1:1649247/164‑1 (MQ=255)

                                                                                                                                                                                                                        tGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCa                                                                                               >  2:1649247/1‑164 (MQ=255)

                                                                                                                                                                                                                        tGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTAt                     <  1:792382/238‑1 (MQ=255)

                                                                                                                                                                                                                        tGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACAGGTCGGCAATAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTATc                    <  1:1122524/239‑1 (MQ=255)

                                                                                                                                                                                                                        ggCCGTGGCAGGGGGTGTGGGGAATGTATTGCCAAC‑G‑TCACGA‑TCAGCGAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGTTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTATc                    <  2:1509598/238‑1 (MQ=255)

                                                                                                                                                                                                                         gCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGGGCCTTATcc                   >  1:698217/1‑239 (MQ=255)

                                                                                                                                                                                                                           cGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTATCCg                  <  1:510365/238‑1 (MQ=255)

                                                                                                                                                                                                                                cAGGCGGTCTGGGAAATGTATTGACAAC‑G‑TCACGATTGCGCC‑GGAGGGAGAGGAGTGC‑TAGAGAGCG‑GGCGGGCTGAA‑G‑AGAAAGAAATTTTGAG‑TCGCAGCGGGTACGCACTTCCGGATGCGGCGCGGG‑CGCCTTATCCGGGTTGCGGGTCGGCAACAGTTGTAGGCCTGATAAGACGGGACAGCGTCGCTTCAGGCATTGATTGCCGGATGCGGCACAAGTGCTTTATCCGGCCTa             <  2:1720406/238‑1 (MQ=18)

                                                                                                                                                                                                                                      gTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACAGGTc       <  2:925363/238‑1 (MQ=255)

                                                                                                                                                                                                                                       tCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACAGGTCg      <  1:1838372/238‑1 (MQ=255)

                                                                                                                                                                                                                                        cTGGGAAGTGTGTTGCCAAC‑G‑TCAGGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCGGCGGGTAAACGCTGCCGGATGCGGGGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACAGGTCgg     <  2:1294822/238‑1 (MQ=255)

                                                                                                                                                                                                                                           ggAAATGTATTGCCAAG‑G‑TCACGA‑TAGCCGATGCGGTAGGGAAGGTC‑TGGTGAGCG‑GACGGGCTTGT‑G‑TGAAGGAAATTTTGAT‑TGGCGGCGTGTAAACACTGCCGGAGGCGTCGCGAG‑CGCCTTAGCCGGCCTACGGGTCGGCGACAGTTGTAGGGCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACAGGTCGGCaa  <  2:26760/238‑1 (MQ=18)

GTGAGATTGTGCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAAC‑G‑TCACGA‑TACGCCAGCAGGTAGCGAATGGC‑TGGAGAGCG‑TGCGGGCTTAT‑G‑AGAAAGAAATTTTGAG‑TCGCCGCGGGTAAACACTGCCGGATGCGGCGCGAG‑CGCCTTATCCGGCCTACGGGTCGGCAACAGTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAGGCATTGATTGCCGGATGCGGCACAAGTGCCTTATCCGGCCTACAGGTCGGCAA  >  NC_007779/3541627‑3542099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`