BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,609,529	A→T	8.0%	I209N (ATT→AAT)	fre ←	NAD(P)H‑flavin reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,609,529	0	A	T	8.0%	416.9 / 2.4	130	I209N (ATT→AAT)	fre	NAD(P)H‑flavin reductase
Reads supporting (aligned to +/- strand): ref base A (67/51); new base T (2/10); total (69/61)
Fisher's exact test for biased strand distribution p-value = 1.26e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 131 total aligned reads displayed.

TTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATCACGGTTTGG  >  NC_007779/3609297‑3609767

ttATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAAAGTAAACACATCGCCCAA‑AAGGCGATCTTCCCCCGGATTTCGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑c                                                                                                                                                                                                                                               >  1:18683/1‑238 (MQ=39)

ttATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTTTATCTCCGATAAAAGCAAACCCATCGCCAAA‑CAAGCGATCTTCCCGCGCCTTACGCTCAC‑TGCAAAACAGAACGCGGG‑CAATTTT‑c                                                                                                                                                                                                                                               >  1:1904898/1‑238 (MQ=39)

  acccggttcaCGGTTCTGACTTTTTTTAGGCCCGATAAGACCCGACAGCGTCGCATCGGGCATGGTTTGCCAGATCCGTCATAGATCTAAATGCCACTGAATAACAGTTTATTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGcc                                                                                                                                                                                                                                            <  2:1847885/230‑1 (MQ=255)

  aTCCGGCCTAGGGTTCGGCTTATTTGTGGGAACATTAAGGCGGGACAGGGTCGCATCGGGCATGGTTTGCCAGTTACGTCATAGATCTAAATGCCCCTGAATAACAGTTTAGTGGCCTTTCTT‑ACCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGcc                                                                                                                                                                                                                                            <  2:1876308/239‑1 (MQ=255)

  aTCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTATATTTCAGATAAATGCAAACGCATCCCCAAA‑CAAGCGATCTTCCCGCGCCTTACGCTCAC‑TGCAAAAAAGATCGCGGG‑CAATTTT‑CGc                                                                                                                                                                                                                                             >  1:250432/1‑238 (MQ=255)

         cgcaggTGCGTACTATTTGTAGGGACGATAAGACGCGACAGCGTCGAATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCa‑a                                                                                                                                                                                                                                    <  2:899343/235‑1 (MQ=255)

         cTACGGTTCGGACTATTTGTGGGCACAATAAGAAGCGACAGCGTCGCGTGGGGCATGGTTGGCCAGATACGTCATAGATCTAAATGCCCCTGAATAACAGTTTAGTTGCCGTTCTC‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCa‑a                                                                                                                                                                                                                                    <  2:760047/239‑1 (MQ=255)

                tCGGATTATTTGTAGGCACGATAAGAGGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                             <  2:248133/238‑1 (MQ=255)

                tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                             <  1:107959/238‑1 (MQ=255)

                tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                             <  1:1838095/238‑1 (MQ=255)

                tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                             <  1:1815859/238‑1 (MQ=255)

                 cGGACTTTTTGTGGGGAGTATAAGGCGCGACAGTTGGGCATCGGGCTTGGTTTGCCAGTTACGTCATAGATCAAAATGCCACTGAATTACAGTTGATTTGCCTTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCg                                                                                                                                                                                                                           <  2:1655265/239‑1 (MQ=255)

                 cGGACTATTTGTAGGCACGATAAGACGCGACAGCGCCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTTTTTCTCCGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCCTTTCGCCCAC‑CGCAAAACAGAACGCGGG‑GAATATT‑CGCCCCCCCC‑AAA‑CGTcc                                                                                                                                                                                                                            >  2:344724/1‑238 (MQ=255)

                  ggACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATTTCTCAGATAAATTCAAACCCCTCGCCAAA‑AAGGCGGTTTTTCCCCGCATTACACTCACTTGCAAAA‑AAAAAGCGGG‑GAATTTT‑TCCCATATCC‑ACA‑Cgctca                                                                                                                                                                                                                           >  2:123754/1‑234 (MQ=255)

                  ggACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCgg                                                                                                                                                                                                                          <  1:310355/239‑1 (MQ=255)

                    aCTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGc                                                                                                                                                                                                                         <  1:1600096/238‑1 (MQ=255)

                     cTATTTGTAGGCAGGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCa                                                                                                                                                                                                                        <  1:1781529/238‑1 (MQ=255)

                        tttGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                   <  1:944244/239‑1 (MQ=255)

                        tttGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                   <  1:754340/239‑1 (MQ=255)

                        tttGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                   <  1:1608829/239‑1 (MQ=255)

                        tttGAAGACACAATAAGACGGAAAAGGTGCGCATCGGGAATGGTTTGCCAGATCCGTCATAGATCTAAATGCCACGGAATACAAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                   <  2:1834853/239‑1 (MQ=255)

                          tGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAg                                                                                                                                                                                                                 <  1:123754/239‑1 (MQ=255)

                          tGTAGGAACGATAAGACGCGCCAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAg                                                                                                                                                                                                                 <  1:48563/239‑1 (MQ=255)

                          gttAGGCACAATAAGCCGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAg                                                                                                                                                                                                                 <  2:486202/237‑1 (MQ=255)

                              ggCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTTTATTTCAGATAAATGCAAACCCCTCGCCAAA‑CAAGCGATCTTTCCCCGCATTACCCCCCC‑TGCAAAACAAATCGCGGG‑GAATTTT‑TGCCATCTCC‑AAA‑CACCCGGCAAa‑ataaaaat                                                                                                                                                                                                             >  1:55765/1‑234 (MQ=255)

                              ggCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCGCGCATTACGCCCAC‑TGCAAAAAAGATCGCCGG‑CAATTTT‑TCCCACCCCA‑AAA‑CGTCCGGCAAT‑ATAGata                                                                                                                                                                                                              >  1:1372711/1‑238 (MQ=255)

                                cacaATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATc                                                                                                                                                                                                            <  1:1710930/238‑1 (MQ=255)

                                cACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGatat                                                                                                                                                                                                             <  1:1506808/237‑1 (MQ=255)

                                  cGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTTTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATg                                                                                                                                                                                                         <  1:1158885/239‑1 (MQ=255)

                                  cGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTTTATCTCAGATAAAAGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGAACGGGGG‑CAATTTT‑TGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAAATATCAt                                                                                                                                                                                                          >  1:1801896/1‑238 (MQ=255)

                                  cGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATg                                                                                                                                                                                                         <  1:1568481/239‑1 (MQ=255)

                                  cGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTTTATCTCAGATAAAATCAAACGCATCGCCAAA‑CAAGCGATCTTCCCCCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAAATTT‑CGCCATCTCA‑AAA‑CGTCCGGCCAA‑AAAGATATCAt                                                                                                                                                                                                          >  1:439798/1‑238 (MQ=255)

                                   gagaaggggcgACAGCGGCGCATGTGGCATGGTTTGCCAGATACTTCATAGATCTAAAGGCCCCTGAAAAACAGTTTGGTTGCTGTTTTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCGC‑TGCAAAACAGATCGCGGG‑CAATGTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGc                                                                                                                                                                                                        <  2:1323495/231‑1 (MQ=255)

                                   gATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGatat                                                                                                                                                                                                             <  1:513709/234‑1 (MQ=255)

                                       aGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTg                                                                                                                                                                                                    <  1:1547810/239‑1 (MQ=255)

                                             gACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTATATTTCAGATAAATGCAAAAGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACCCCCAC‑TGCAAAACAGAACCCGGG‑GAATTTT‑TGCCATCTCA‑AAA‑CGTCCGGCAAT‑AAAAATATCATGCTCTGccctgt                                                                                                                                                                                              >  2:513709/1‑235 (MQ=255)

                                                   gTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGt                                                                                                                                                                                        <  1:283317/239‑1 (MQ=255)

                                                           ggctaTGGTTTCCCAGTTCCGTAATGGTTTTAAGGCCCACTGATTAACTTTTTATTTGCCGTTCTC‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CGGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATcc                                                                                                                                                                                   <  2:784626/232‑1 (MQ=255)

                                                            ggCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTTTATTTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTTCCCCGCATTACGCTCAC‑TGCCAAAAAAAACGCGGG‑GAATTTT‑TGCCCTCTCA‑AAA‑AGTCCGGCAAA‑ATAAAAATCATGCTCTGCCAGCGTACCGTGGTCCTGC‑a                                                                                                                                                                              >  2:283317/1‑239 (MQ=255)

                                                                      gCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTC‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGc                                                                                                                                                                                                                                             <  1:1101881/170‑1 (MQ=255)

                                                                            tACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTTTATCTCAGATAAATGCCAACGCATCCCCAAA‑CAAGCGATCTTCCCCCCCCTTCCCCCCCC‑CCCAAAAAAAAACGCCGG‑CAATTTT‑CCCCCTCCCA‑CAA‑CGCCCGGCAAT‑ATAGATATCATGCCCTGCCCGCGTCCCGTGATCCTGC‑AATACCGCCCTTAaaac                                                                                                                                                              >  2:1400242/1‑239 (MQ=255)

                                                                            tACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTTTATCTCAGATAAATGCAAACGCCTCGCCAAA‑CAGGCGATCTTCCCGCGCATTAAGCCCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCCTCTCA‑AAA‑CGTCCGGCAAT‑ATAGat                                                                                                                                                                                                               >  1:385562/1‑191 (MQ=255)

                                                                                 cATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑Cg                                                                                                                                                                                                                                              <  1:1556927/158‑1 (MQ=255)

                                                                                 cATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                             <  1:331469/173‑1 (MQ=255)

                                                                                      aTCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCCCCC‑TGCAAAACAGAACGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑AGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AAAACCGCCGTTAACACGGTGCCAGt                                                                                                                                                     >  1:518812/1‑238 (MQ=255)

                                                                                      aTCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTTTATTTCAGATAAAAGCAAACACATCGCCAAA‑CAGGCCGTCTTTCCTCGCATTACGATCTC‑CGAAAAACAGATCGCGGG‑GGAATTT‑TGCCATCTCACAAA‑CCCCCGCCAA‑‑CTATACATCATTCTCTGCCAGCGGTCCGTGAGCCCGC‑CATACCCCCGGTTACACGGTgtccca                                                                                                                                                     >  2:204164/1‑233 (MQ=255)

                                                                                         tAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTTTATTTCAAATAAATGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCGCGCATTACGCTCCC‑TGCAAAAAACATCGCGGG‑CAATTTT‑TGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATTCTCTGCCCGCGGACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACg                                                                                                                                                  >  1:1203301/1‑238 (MQ=255)

                                                                                         tAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTATATTTCAGATAAATGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCCCGCATTACGCTCAC‑TGCAAAACAGAACGCGGG‑CAATTTT‑TGCCATCTCC‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAACGTACCGTGATCCTGC‑AATACCCCCGTTAACAACGTGCCAGTaac                                                                                                                                                  >  1:652810/1‑236 (MQ=255)

                                                                                                 aCTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTATATCTCAGATAAAAGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCCTTACGCTCAC‑TGCAAAACAAATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCCAT‑ATAGATATCATGCTCTTCCCGc                                                                                                                                                                                               >  1:1488060/1‑186 (MQ=255)

                                                                                                     aaTAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑a                                                                                                                                                                                                                    <  1:645248/161‑1 (MQ=255)

                                                                                                     aaTAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTTTATTTCAGATAAATGCAAACGCCTCGCCCAA‑AAGGCGGTCTTCCCCCCCCCTACGCCCAC‑TGCCAAACAAAACGCGGGCCATTTTT‑CCCCTCCTCA‑AAA‑CGCCCGCCAA‑‑ATAAATATCATTCTCCGCCCCCGCACCCCGCTCCCGC‑CACAACGCCGTTAACACAGGGCCCGTCCCCCCAcccccccc                                                                                                                                      >  2:1322587/1‑234 (MQ=255)

                                                                                                             tttAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTTTATATCTGATAAATGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCCCGCCTTCCGCTCAC‑TGCCAAAAAAAACGCGGG‑CAAATTT‑CTCCATCTCA‑AAA‑CGTCCCGCCATCAAAAAAACCAT‑CCCTGCCCGCGTACCGTGACTCCGC‑CATACCCCCGTTCACACCGGGCCCGTCCGCCCCCCCCCCCCCGcaccccg                                                                                                                             >  2:1358449/1‑233 (MQ=255)

                                                                                                              ttAGTTTGCTTTCTTCCCCGCCTGTCAGGGGCGGGTTTTGTTATATCTCAGAAAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCAGTACGCTCAC‑TGCAAAACAGATCGCGGG‑CATTTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTGCCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCgg                                                                                                                             <  2:1394256/239‑1 (MQ=255)

                                                                                                               tAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTTCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCCTCTCA‑AAA‑AGTCCGGCAAT‑ATAGATATCATGCTCTGCCCGCGTACCGTGATCCTGC‑AATACCCCCGTTAACACGGTGCCCGTACGc                                                                                                                                                 >  1:99434/1‑217 (MQ=255)

                                                                                                               tAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGGTTTTTTTTATTTCAGATAAATGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCCCGCCTTACCGCCAC‑TTCCAAACAAAACCCGGG‑CCATTTT‑CGCCCTCTCA‑AAA‑ACTCCCGCAAA‑ATATAACTCATGCCCTGCCCGCGTTCCCGGATCCTGC‑AATAACCCCCTTAACACCGTGCCCGGACGCCCACCCCCGCCCCCCTCCCgtt                                                                                                                           >  2:34076/1‑239 (MQ=255)

                                                                                                                                            gtgtttttttttATCCCTCAAAAAAATCCACACCGTCCGCCAAC‑GCGGCGACCTCCCCGCGCATACCCCTACC‑TGAAAAACGGATCG‑GGG‑CAAATTT‑CCCCCCCCAA‑AAACCGCCCACAAAT‑ATAATTATCGTGCTAGCCGAGCAT‑CCGTCGTCCCGCAAATCCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGAc                                                                                                <  2:1947460/233‑1 (MQ=255)

                                                                                                                                                          atCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                             <  2:1647569/101‑1 (MQ=255)

                                                                                                                                                          atCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACTACCGGCACCAATTGCAGTCCAGGCTGCTTCCACg                                                                                 >  2:1529840/1‑239 (MQ=255)

                                                                                                                                                          atCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACg                                                                                 >  1:708525/1‑239 (MQ=255)

                                                                                                                                                           tctcAGATAAATGCAAAAGCATCGCAAAA‑CATGCGATCTTCCCGCGCATTACACTCAC‑TGCAAAACAGATCGCGGG‑CAATTAT‑CGCCAACTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑ACTACCGCAGTTAACACGGAGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCCTCACTTCCTGACCAGGATGCTCCAACGa                                                                                >  2:1158967/1‑239 (MQ=255)

                                                                                                                                                              cAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCCCCACTTGCAGACCAGGATGCTTCACCGaaa                                                                              >  2:786285/1‑238 (MQ=255)

                                                                                                                                                                      tGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCaa                                                                     >  1:1636956/1‑239 (MQ=255)

                                                                                                                                                                      tGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCaa                                                                     >  1:936873/1‑239 (MQ=255)

                                                                                                                                                                       ccAACCGCACCGCCAAA‑CAGGCGCTCTCCCCGCCCATTCCCCTCCC‑TGAAAAACAGCCCGCGGC‑CATTTTT‑CCCCATCTCA‑AAC‑CGCCCGGAAAT‑ATAGATATCATCCTCTGCCAGCTTCCCGTGATCCTGA‑AATTCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAg                                                                    <  1:1833394/238‑1 (MQ=255)

                                                                                                                                                                         aaaCGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGc                                                                   >  1:1034849/1‑238 (MQ=255)

                                                                                                                                                                           aCGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGt                                                                                                                                                     >  1:536254/1‑154 (MQ=255)

                                                                                                                                                                           aCGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTc                                                                 >  1:1267625/1‑238 (MQ=255)

                                                                                                                                                                           aCGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGAGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGCTGTTCAACCACCGGCACCACTTGCGGACCAGGATGCTTCAACGATACCGCCCCacgacc                                                                 >  2:1333693/1‑233 (MQ=255)

                                                                                                                                                                             gcctcccaaaa‑CAGGCGATCTCCCCGCCCATTACGCTCAC‑TGAAAAACAGAGCGCGGA‑CATTTTT‑CGCCATCACA‑AAC‑CGTCCGGAAAT‑ATAGATATCATGCTCTGCCAGCGTCCCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCa                                                              <  1:972656/231‑1 (MQ=255)

                                                                                                                                                                             ccaaccccAAACCAGGCTATCTCCCCGCGCATTACGCTCCC‑GAAAAAACAGACCGGGGG‑CATTTTC‑CGCCATCCCA‑AAA‑CGTCCGGAAAT‑ATAGATACCATGCTCTGCCAGCGTCCCGTGATCCTCA‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGc                                                               <  1:27822/233‑1 (MQ=255)

                                                                                                                                                                               accaccAAC‑CAGGCGTTCCCCCCTCGCACTACGCTCAC‑TGCAAAAGAGCTCGCGCG‑CAATTCT‑CCCCATCTAA‑AAC‑CCCCCGACAAT‑ATAAATATCATCCTCCCCCACCGTCCCGTGCCCCTCC‑AATCCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCaga                                                            <  2:294847/235‑1 (MQ=255)

                                                                                                                                                                               aTCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCaga                                                            >  1:465208/1‑239 (MQ=255)

                                                                                                                                                                                tCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGc                                                                                                                                                         >  1:809215/1‑145 (MQ=255)

                                                                                                                                                                                tCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCagag                                                           >  1:335079/1‑239 (MQ=255)

                                                                                                                                                                                tCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCagag                                                           >  1:1539843/1‑239 (MQ=255)

                                                                                                                                                                                 cGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAgaga                                                          >  1:718051/1‑239 (MQ=255)

                                                                                                                                                                                  acaaaa‑CAGGGGTTCTCCCCGCGCTTTCCGCTCAC‑TGAAAAACAGATCG‑GGG‑AAATTTTCCGCCATCAAA‑AAA‑CGCCCGGAAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGACCCTGA‑AATGCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGAt                                                         <  1:1400242/236‑1 (MQ=255)

                                                                                                                                                                                            gCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGAt                                                >  1:108796/1‑239 (MQ=255)

                                                                                                                                                                                            gCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGAt                                                >  1:765247/1‑239 (MQ=255)

                                                                                                                                                                                             cGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGAt                                                >  1:751636/1‑238 (MQ=255)

                                                                                                                                                                                                tctcCCCGCGCATTCCGCTCAC‑TGAAAAACAGACCGGGGG‑CATTTTC‑CCCCATCACA‑AAA‑CGCCCGAAAAT‑ATAGATATCATGCTCTCCCAGCGTACCGTGACCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGAtgctg                                            <  1:34076/239‑1 (MQ=255)

                                                                                                                                                                                                          cATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcg                                   >  1:816886/1‑238 (MQ=255)

                                                                                                                                                                                                           aTTACGCTCAC‑TGAAAAACAGATCGCGGG‑CAATTTC‑CCCCACCTCA‑AAC‑CCCCCGGAAAT‑AAAGATATCATGCTCTGCCAGCTTCCCGTGTCCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcgcc                                 <  1:873536/239‑1 (MQ=255)

                                                                                                                                                                                                              aCGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATa                                                     >  1:897251/1‑216 (MQ=255)

                                                                                                                                                                                                               cGCTCCC‑TGAAAAACGAATCGCGGA‑CATTTTC‑CCCCATCCAA‑AAC‑CGTCCGGAAAT‑ATAGATTTCATCCTCTGCCAGCGTACCTTGACCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcgcccgcc                             <  1:887797/239‑1 (MQ=255)

                                                                                                                                                                                                               cGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTC‑CGCCATCTCA‑AAC‑CGCCCGGAAAT‑ATAGATATCATGCTCTGCCAGCGTCCCGTGACCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcgcccgcc                             <  1:1322587/239‑1 (MQ=255)

                                                                                                                                                                                                               cGCTCAC‑TGAAAAACAGATCGCGGG‑CAATTTC‑CCCCATCCAA‑AAA‑CGCCCGGAAAT‑ATAATTATCATGCTCGGCCAGCTTACCGTGACCCTAA‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcgcccgcc                             <  1:391853/239‑1 (MQ=255)

                                                                                                                                                                                                                     c‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTa                       >  1:1419403/1‑239 (MQ=255)

                                                                                                                                                                                                                          agcgtaatgcgcgGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATg                   >  2:878377/10‑239 (MQ=255)

                                                                                                                                                                                                                                 aTCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata             >  1:1202750/1‑238 (MQ=255)

                                                                                                                                                                                                                                 aTCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata             >  1:722063/1‑238 (MQ=255)

                                                                                                                                                                                                                                 aTCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata             >  1:720923/1‑238 (MQ=255)

                                                                                                                                                                                                                                 aTCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata             >  1:477173/1‑238 (MQ=255)

                                                                                                                                                                                                                                 aTCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata             >  1:1563664/1‑238 (MQ=255)

                                                                                                                                                                                                                                  tCGCGGG‑CATTTTC‑CCCCATCAAA‑AAA‑CGCCCGAAAAT‑ATAGATATCATGCTCTGCCAGCGTCCCGTGCTCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATc           <  1:732856/239‑1 (MQ=255)

                                                                                                                                                                                                                                   cgcgGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCg                                                                                                                                                                                              >  1:824743/1‑60 (MQ=255)

                                                                                                                                                                                                                                   cgcgGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCg                                                                                                                                                                                              <  2:824743/60‑1 (MQ=255)

                                                                                                                                                                                                                                      ggg‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATCACgg       >  1:1828685/1‑239 (MQ=255)

                                                                                                                                                                                                                                        g‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATCACGGtt     >  2:127258/1‑239 (MQ=255)

                                                                                                                                                                                                                                            aTTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGAAATCACGTTTTgg  >  2:49227/1‑239 (MQ=255)

TTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTT‑CCCGCCTGTCAGGGGCGGGTTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGCAAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATCACGGTTTGG  >  NC_007779/3609297‑3609767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`