BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,609,535	G→C	11.6%	A207G (GCG→GGG)	fre ←	NAD(P)H‑flavin reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,609,535	0	G	C	11.6%	329.6 / 5.5	128	A207G (GCG→GGG)	fre	NAD(P)H‑flavin reductase
Reads supporting (aligned to +/- strand): ref base G (60/50); new base C (5/11); total (67/61)
Fisher's exact test for biased strand distribution p-value = 1.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01

Only 100 of 129 total aligned reads displayed.

ATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATCACGGTTTGGGTTA  >  NC_007779/3609299‑3609771

acccggttcaCGGTTCTGACTTTTTTTAGGCCCGATAAGACCCGACAGCGTCGCATCGGGCATGGTTTGCCAGATCCGTCATAGATCTAAATGCCACTGAATAACAGTTTATTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGcc                                                                                                                                                                                                                                                <  2:1847885/230‑1 (MQ=255)

       cgcaggTGCGTACTATTTGTAGGGACGATAAGACGCGACAGCGTCGAATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCa‑a                                                                                                                                                                                                                                        <  2:899343/235‑1 (MQ=255)

       cTACGGTTCGGACTATTTGTGGGCACAATAAGAAGCGACAGCGTCGCGTGGGGCATGGTTGGCCAGATACGTCATAGATCTAAATGCCCCTGAATAACAGTTTAGTTGCCGTTCTCCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCa‑a                                                                                                                                                                                                                                        <  2:760047/239‑1 (MQ=255)

              tCGGATTATTTGTAGGCACGATAAGAGGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                                 <  2:248133/238‑1 (MQ=255)

              tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                                 <  1:107959/238‑1 (MQ=255)

              tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                                 <  1:344724/238‑1 (MQ=255)

              tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                                 <  1:1838095/238‑1 (MQ=255)

               cGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACCCATCGCCCAA‑AAGGCGATCTTTCCGCGCATTAACCCCAC‑TGC‑AAAACCAATCCCGGG‑CAATTTT‑TGCCCTCTCA‑AAA‑CGtacc                                                                                                                                                                                                                               >  1:1842214/1‑236 (MQ=255)

                ggACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATTTCTCAGATAAATTCAAACCCCTCGCCAAA‑AAGGCGGTTTTTCCCCGCATTACACTCACTTGC‑AAAA‑AAAAAGCGGG‑GAATTTT‑TCCCATATCC‑ACA‑Cgctca                                                                                                                                                                                                                               >  2:123754/1‑234 (MQ=255)

                  aCTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGc                                                                                                                                                                                                                             <  1:1600096/238‑1 (MQ=255)

                   cTATTTGTAGGCAGGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCa                                                                                                                                                                                                                            <  1:1781529/238‑1 (MQ=255)

                      tttGTAGGCAGGATAAGCCGCGACAGCGTCGCATCGGGAATGGTTTGCCGGATACGTCATAGATCTAAATGCCACTGAATACCATTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                       <  2:1271000/239‑1 (MQ=255)

                      tttGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                       <  1:944244/239‑1 (MQ=255)

                      tttGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                       <  1:754340/239‑1 (MQ=255)

                      tttGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                       <  1:731416/239‑1 (MQ=255)

                      tttGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                       <  1:1608829/239‑1 (MQ=255)

                      tttGAAGACACAATAAGACGGAAAAGGTGCGCATCGGGAATGGTTTGCCAGATCCGTCATAGATCTAAATGCCACGGAATACAAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                       <  2:1834853/239‑1 (MQ=255)

                      ttggTAGGACCGATAAGACGCGAAAGCGTCGCATCGGGCATGGTTTGCCGGATCCGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTGGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑at                                                                                                                                                                                                                       <  2:1896109/236‑1 (MQ=255)

                        tGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAg                                                                                                                                                                                                                     <  1:123754/239‑1 (MQ=255)

                        tGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAg                                                                                                                                                                                                                     <  1:260524/239‑1 (MQ=255)

                        tGTAGGAACGATAAGACGCGCCAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAg                                                                                                                                                                                                                     <  1:48563/239‑1 (MQ=255)

                        gttAGGCACAATAAGCCGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAg                                                                                                                                                                                                                     <  2:486202/237‑1 (MQ=255)

                        gatAGGCAGGAAAAGACGCGACAGGGTCGCATGGGGATTGGTTGGCCAGATACGTCATGGATCTAAAGGCCACTGAATAACATTTTGGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGA‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAg                                                                                                                                                                                                                     <  2:356842/237‑1 (MQ=255)

                            ggCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTTTATTTCAGATAAATGCAAACCCCTCGCCAAA‑CAAGCGATCTTTCCCCGCATTACCCCCCC‑TGC‑AAAACAAATCGCGGG‑GAATTTT‑TGCCATCTCC‑AAA‑CACCCGGCAAa‑ataaaaat                                                                                                                                                                                                                 >  1:55765/1‑234 (MQ=255)

                            ggCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCGCGCATTACGCCCAC‑TGC‑AAAAAAGATCGCCGG‑CAATTTT‑TCCCACCCCA‑AAA‑CGTCCGGCAAT‑ATAGata                                                                                                                                                                                                                  >  1:1372711/1‑238 (MQ=255)

                            ggCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTTTTTCTCAGAAAAAATCAAACCCACCGCCAAA‑AAAGCGGTCTTTCCGCGCATTAAGCCCAC‑TCCAAAAACAGAACGGGGG‑AATTTTT‑CCCCTCCTC‑‑AAA‑CGTCCGGCCAT‑AAAAataa                                                                                                                                                                                                                 >  2:1776454/1‑238 (MQ=255)

                              cACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGatat                                                                                                                                                                                                                 <  1:515616/237‑1 (MQ=255)

                              cACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGatat                                                                                                                                                                                                                 <  1:1506808/237‑1 (MQ=255)

                                cGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTTTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATg                                                                                                                                                                                                             <  1:1158885/239‑1 (MQ=255)

                                cGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTTTATCTCAGATAAAAGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGAACGGGGG‑CAATTTT‑TGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAAATATCAt                                                                                                                                                                                                              >  1:1801896/1‑238 (MQ=255)

                                cGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATg                                                                                                                                                                                                             <  1:1568481/239‑1 (MQ=255)

                                cGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTTTATCTCAGATAAAATCAAACGCATCGCCAAA‑CAAGCGATCTTCCCCCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAAATTT‑CGCCATCTCA‑AAA‑CGTCCGGCCAA‑AAAGATATCAt                                                                                                                                                                                                              >  1:439798/1‑238 (MQ=255)

                                     aGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTg                                                                                                                                                                                                        <  1:1547810/239‑1 (MQ=255)

                                           gACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTATATTTCAGATAAATGCAAAAGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACCCCCAC‑TGC‑AAAACAGAACCCGGG‑GAATTTT‑TGCCATCTCA‑AAA‑CGTCCGGCAAT‑AAAAATATCATGCTCTGccctgt                                                                                                                                                                                                  >  2:513709/1‑235 (MQ=255)

                                                 gTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGt                                                                                                                                                                                            <  1:283317/239‑1 (MQ=255)

                                                   cGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGa                                                                                                                                                                                          <  1:870976/239‑1 (MQ=255)

                                                         ggctaTGGTTTCCCAGTTCCGTAATGGTTTTAAGGCCCACTGATTAACTTTTTATTTGCCGTTCTCCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CGGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATcc                                                                                                                                                                                       <  2:784626/232‑1 (MQ=255)

                                                                    gCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTTTATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGAACCCGGG‑CAAATTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCCGCGGACCGCGATCCTGC‑AATACCGCCGt                                                                                                                                                                        >  1:1803729/1‑239 (MQ=255)

                                                                    gCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTCCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGc                                                                                                                                                                                                                                                 <  1:1101881/170‑1 (MQ=255)

                                                                          tACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTTTATCTCAGATAAATGCCAACGCATCCCCAAA‑CAAGCGATCTTCCCCCCCCTTCCCCCCCC‑CCC‑AAAAAAAAACGCCGG‑CAATTTT‑CCCCCTCCCA‑CAA‑CGCCCGGCAAT‑ATAGATATCATGCCCTGCCCGCGTCCCGTGATCCTGC‑AATACCGCCCTTAaaac                                                                                                                                                                  >  2:1400242/1‑239 (MQ=255)

                                                                          tACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTTTATCTCAGATAAATGCAAACGCCTCGCCAAA‑CAGGCGATCTTCCCGCGCATTAAGCCCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCCTCTCA‑AAA‑CGTCCGGCAAT‑ATAGat                                                                                                                                                                                                                   >  1:385562/1‑191 (MQ=255)

                                                                               cATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑Cg                                                                                                                                                                                                                                                  <  1:1556927/158‑1 (MQ=255)

                                                                               cATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                                 <  1:331469/173‑1 (MQ=255)

                                                                                    aTCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCCCCC‑TGC‑AAAACAGAACGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑AGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AAAACCGCCGTTAACACGGTGCCAGt                                                                                                                                                         >  1:518812/1‑238 (MQ=255)

                                                                                    aTCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTTTATTTCAGATAAAAGCAAACACATCGCCAAA‑CAGGCCGTCTTTCCTCGCATTACGATCTC‑CGA‑AAAACAGATCGCGGG‑GGAATTT‑TGCCATCTCACAAA‑CCCCCGCCAA‑‑CTATACATCATTCTCTGCCAGCGGTCCGTGAGCCCGC‑CATACCCCCGGTTACACGGTgtccca                                                                                                                                                         >  2:204164/1‑233 (MQ=255)

                                                                                     tCTAAATGCCACTGAATACCAGTTTAGTTGCCGTTCTCCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATg                                                                                                                                                                                                             <  2:1488060/186‑1 (MQ=255)

                                                                                       tAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTTTATTTCAAATAAATGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCGCGCATTACGCTCCC‑TGC‑AAAAAACATCGCGGG‑CAATTTT‑TGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATTCTCTGCCCGCGGACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACg                                                                                                                                                      >  1:1203301/1‑238 (MQ=255)

                                                                                       tAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTATATTTCAGATAAATGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCCCGCATTACGCTCAC‑TGC‑AAAACAGAACGCGGG‑CAATTTT‑TGCCATCTCC‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAACGTACCGTGATCCTGC‑AATACCCCCGTTAACAACGTGCCAGTaac                                                                                                                                                      >  1:652810/1‑236 (MQ=255)

                                                                                              cACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACCCATCGCCAAA‑CAGGCGATCTTCCCCCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑TGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACCGTGCCAGTACGCCCAccc                                                                                                                                               >  1:122335/1‑236 (MQ=255)

                                                                                               aCTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTATATCTCAGATAAAAGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCCTTACGCTCAC‑TGC‑AAAACAAATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCCAT‑ATAGATATCATGCTCTTCCCGc                                                                                                                                                                                                   >  1:1488060/1‑186 (MQ=255)

                                                                                                   aaTAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAat‑a                                                                                                                                                                                                                        <  1:645248/161‑1 (MQ=255)

                                                                                                   aaTAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTTTATTTCAGATAAATGCAAACGCCTCGCCCAA‑AAGGCGGTCTTCCCCCCCCCTACGCCCAC‑TGC‑CAAACAAAACGCGGGCCATTTTT‑CCCCTCCTCA‑AAA‑CGCCCGCCAA‑‑ATAAATATCATTCTCCGCCCCCGCACCCCGCTCCCGC‑CACAACGCCGTTAACACAGGGCCCGTCCCCCCAcccccccc                                                                                                                                          >  2:1322587/1‑234 (MQ=255)

                                                                                                           tttAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTTTATATCTGATAAATGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCCCGCCTTCCGCTCAC‑TGC‑CAAAAAAAACGCGGG‑CAAATTT‑CTCCATCTCA‑AAA‑CGTCCCGCCATCAAAAAAACCAT‑CCCTGCCCGCGTACCGTGACTCCGC‑CATACCCCCGTTCACACCGGGCCCGTCCGCCCCCCCCCCCCCGcaccccg                                                                                                                                 >  2:1358449/1‑233 (MQ=255)

                                                                                                             tAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTTCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCCTCTCA‑AAA‑AGTCCGGCAAT‑ATAGATATCATGCTCTGCCCGCGTACCGTGATCCTGC‑AATACCCCCGTTAACACGGTGCCCGTACGc                                                                                                                                                     >  1:99434/1‑217 (MQ=255)

                                                                                                             tAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑GTTTTTTTTATTTCAGATAAATGCAAACGCATCGCCAAA‑CAAGCGATCTTCCCCCGCCTTACCGCCAC‑TTC‑CAAACAAAACCCGGG‑CCATTTT‑CGCCCTCTCA‑AAA‑ACTCCCGCAAA‑ATATAACTCATGCCCTGCCCGCGTTCCCGGATCCTGC‑AATAACCCCCTTAACACCGTGCCCGGACGCCCACCCCCGCCCCCCTCCCgtt                                                                                                                               >  2:34076/1‑239 (MQ=255)

                                                                                                                        cttcCCGCCTCGGTAGGGGGGGTTTTTTTTTATATCTCAGACAAAGGCACACGCCTCGCCAAA‑CGGGCGTTCTCCCCGCACCTACCGCTCCC‑GAA‑AAAACGGAGCGGGGG‑CATTTTC‑CCCCATCAAA‑AAC‑CGCCCGAAATT‑ATAGATTTCATGCTCTGCCCGCCCCCCGTGTTCCTGA‑AAATCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAacca                                                                                                                      <  2:1353070/239‑1 (MQ=255)

                                                                                                                                           gtgtttttttttATCCCTCAAAAAAATCCACACCGTCCGCCAAC‑GCGGCGACCTCCCCGCGCATACCCCTACC‑TGA‑AAAACGGATCG‑GGG‑CAAATTT‑CCCCCCCCAA‑AAACCGCCCACAAAT‑ATAATTATCGTGCTAGCCGAGCAT‑CCGTCGTCCCGCAAATCCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGAc                                                                                                    <  2:1947460/233‑1 (MQ=255)

                                                                                                                                                    tttATATCTCAGATAAATGCAAACGCATCGCCCAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCt                                                                                           >  1:314268/1‑238 (MQ=255)

                                                                                                                                                         atCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                                 >  1:1647569/1‑101 (MQ=255)

                                                                                                                                                         atCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTc                                                                                                                                                                                                                                 <  2:1647569/101‑1 (MQ=255)

                                                                                                                                                         atCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACTACCGGCACCAATTGCAGTCCAGGCTGCTTCCACg                                                                                     >  2:1529840/1‑239 (MQ=255)

                                                                                                                                                         atCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACg                                                                                     >  1:708525/1‑239 (MQ=255)

                                                                                                                                                             cAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCCCCACTTGCAGACCAGGATGCTTCACCGaaa                                                                                  >  2:786285/1‑238 (MQ=255)

                                                                                                                                                                     tGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCaa                                                                         >  1:1636956/1‑239 (MQ=255)

                                                                                                                                                                     tGCAAACGCATCGCCAAA‑CACGCTATCTTCCCGCGCATTACGCTGAC‑TGC‑AACTCAGAACGCGGG‑CAAGTTT‑CGCCATCTCA‑ACA‑CGTCCGGCATT‑ATAGCTATCATGCTCGGCCAGCGTACCGTGATCCTGC‑AATACCCCCGTAAACACGGTGCCAGCACGCCCAGGCCCGCCCGCTCCCGGTTGTTCAACCACTGGCACCACTTGCGGACCGGTGTGCGTCATGGAAAGCCCCTCaa                                                                         >  2:28555/1‑239 (MQ=255)

                                                                                                                                                                      ccAACCGCACCGCCAAA‑CAGGCGCTCTCCCCGCCCATTCCCCTCCC‑TGA‑AAAACAGCCCGCGGC‑CATTTTT‑CCCCATCTCA‑AAC‑CGCCCGGAAAT‑ATAGATATCATCCTCTGCCAGCTTCCCGTGATCCTGA‑AATTCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAg                                                                        <  1:1833394/238‑1 (MQ=255)

                                                                                                                                                                        aaaCGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGc                                                                       >  1:1034849/1‑238 (MQ=255)

                                                                                                                                                                          aCGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAaca                                                                                                                                                                   >  1:932165/1‑144 (MQ=255)

                                                                                                                                                                          aCGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGt                                                                                                                                                         >  1:536254/1‑154 (MQ=255)

                                                                                                                                                                          aCGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTc                                                                     >  1:1267625/1‑238 (MQ=255)

                                                                                                                                                                          aCGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGAGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGCTGTTCAACCACCGGCACCACTTGCGGACCAGGATGCTTCAACGATACCGCCCCacgacc                                                                     >  2:1333693/1‑233 (MQ=255)

                                                                                                                                                                            gcctcccaaaa‑CAGGCGATCTCCCCGCCCATTACGCTCAC‑TGA‑AAAACAGAGCGCGGA‑CATTTTT‑CGCCATCACA‑AAC‑CGTCCGGAAAT‑ATAGATATCATGCTCTGCCAGCGTCCCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCa                                                                  <  1:972656/231‑1 (MQ=255)

                                                                                                                                                                            ccaaccccAAACCAGGCTATCTCCCCGCGCATTACGCTCCC‑GAA‑AAAACAGACCGGGGG‑CATTTTC‑CGCCATCCCA‑AAA‑CGTCCGGAAAT‑ATAGATACCATGCTCTGCCAGCGTCCCGTGATCCTCA‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGc                                                                   <  1:27822/233‑1 (MQ=255)

                                                                                                                                                                              accaccAAC‑CAGGCGTTCCCCCCTCGCACTACGCTCAC‑TGC‑AAAAGAGCTCGCGCG‑CAATTCT‑CCCCATCTAA‑AAC‑CCCCCGACAAT‑ATAAATATCATCCTCCCCCACCGTCCCGTGCCCCTCC‑AATCCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCaga                                                                <  2:294847/235‑1 (MQ=255)

                                                                                                                                                                              aTCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCaga                                                                >  1:465208/1‑239 (MQ=255)

                                                                                                                                                                               tCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGc                                                                                                                                                             >  1:809215/1‑145 (MQ=255)

                                                                                                                                                                               tCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCagag                                                               >  1:1539843/1‑239 (MQ=255)

                                                                                                                                                                               tCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCagag                                                               >  1:335079/1‑239 (MQ=255)

                                                                                                                                                                                cGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAgaga                                                              >  1:718051/1‑239 (MQ=255)

                                                                                                                                                                                 acaaaa‑CAGGGGTTCTCCCCGCGCTTTCCGCTCAC‑TGA‑AAAACAGATCG‑GGG‑AAATTTTCCGCCATCAAA‑AAA‑CGCCCGGAAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGACCCTGA‑AATGCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGAt                                                             <  1:1400242/236‑1 (MQ=255)

                                                                                                                                                                                           gCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGAt                                                    >  1:108796/1‑239 (MQ=255)

                                                                                                                                                                                           gCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGAt                                                    >  1:765247/1‑239 (MQ=255)

                                                                                                                                                                                            cGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGAt                                                    >  1:751636/1‑238 (MQ=255)

                                                                                                                                                                                                         cATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcg                                       >  1:816886/1‑238 (MQ=255)

                                                                                                                                                                                                             aCGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATa                                                         >  1:897251/1‑216 (MQ=255)

                                                                                                                                                                                                              cGCTCCC‑TGA‑AAAACGAATCGCGGA‑CATTTTC‑CCCCATCCAA‑AAC‑CGTCCGGAAAT‑ATAGATTTCATCCTCTGCCAGCGTACCTTGACCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcgcccgcc                                 <  1:887797/239‑1 (MQ=255)

                                                                                                                                                                                                              cGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTC‑CGCCATCTCA‑AAC‑CGCCCGGAAAT‑ATAGATATCATGCTCTGCCAGCGTCCCGTGACCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcgcccgcc                                 <  1:1322587/239‑1 (MQ=255)

                                                                                                                                                                                                              cGCTCAC‑TGA‑AAAACAGATCGCGGG‑CAATTTC‑CCCCATCCAA‑AAA‑CGCCCGGAAAT‑ATAATTATCATGCTCGGCCAGCTTACCGTGACCCTAA‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcgcccgcc                                 <  1:391853/239‑1 (MQ=255)

                                                                                                                                                                                                                    c‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTa                           >  1:1419403/1‑239 (MQ=255)

                                                                                                                                                                                                                          agcgtaatgcgcgGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATg                       >  2:878377/10‑239 (MQ=255)

                                                                                                                                                                                                                                 aTCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata                 >  1:1202750/1‑238 (MQ=255)

                                                                                                                                                                                                                                 aTCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata                 >  1:1563664/1‑238 (MQ=255)

                                                                                                                                                                                                                                 aTCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata                 >  1:477173/1‑238 (MQ=255)

                                                                                                                                                                                                                                 aTCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata                 >  1:720923/1‑238 (MQ=255)

                                                                                                                                                                                                                                 aTCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata                 >  1:722063/1‑238 (MQ=255)

                                                                                                                                                                                                                                   cgcgGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCg                                                                                                                                                                                                  <  2:824743/60‑1 (MQ=255)

                                                                                                                                                                                                                                   cgcgGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCg                                                                                                                                                                                                  >  1:824743/1‑60 (MQ=255)

                                                                                                                                                                                                                                      ggg‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATCACgg           >  1:1828685/1‑239 (MQ=255)

                                                                                                                                                                                                                                        g‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATCACGGtt         >  2:127258/1‑239 (MQ=255)

                                                                                                                                                                                                                                            aTTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGAAATCACGTTTTgg      >  2:49227/1‑239 (MQ=255)

ATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCT‑GTCAGGGGCGGG‑TTTTTTTATATCTCAGATAAATGCAAACGCATCGCCAAA‑CAGGCGATCTTCCCGCGCATTACGCTCAC‑TGC‑AAAACAGATCGCGGG‑CAATTTT‑CGCCATCTCA‑AAA‑CGTCCGGCAAT‑ATAGATATCATGCTCTGCCAGCGTACCGTGATCCTGC‑AATACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATCACGGTTTGGGTTA  >  NC_007779/3609299‑3609771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`