| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,678,574 | G→A | 15.0% | G46G (GGC→GGT) | ilvC ← | ketol‑acid reductoisomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 3,678,574 | 0 | G | A | 15.0% | 516.7 / 79.9 | 220 | G46G (GGC→GGT) | ilvC | ketol‑acid reductoisomerase |
| Reads supporting (aligned to +/- strand): ref base G (104/82); new base A (19/14); total (124/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.50e-02 | |||||||||||
Only 100 of 227 total aligned reads displayed.
TCTTTCATCAGTGGCTGTACGGTGCGCACTACATCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGATATATTCA > NC_007779/3678341‑3678812 | cTTTCATCAGTGGCTGTACGGTGCGCACTACATCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCACCACAg < 1:1179265/239‑1 (MQ=255) tttCATCAGTGGCTGTACGGTGCGCACTACATCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGc < 1:1031726/239‑1 (MQ=255) gTGGCTGTACGGTGCGCACTACATCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATg > 2:939166/1‑239 (MQ=255) gTGGCTGTACGGTGCGCACTACATCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATg > 2:427348/1‑239 (MQ=255) tGGCTGTACGGTGCGCACTACATCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATg > 1:503682/1‑238 (MQ=255) tGGCTGTACGGTGCGCACTACATCAGAGTGCTCCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGCCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATg > 2:1089315/1‑238 (MQ=255) ggCTGTACGGTGCGCACTACATCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGac < 1:514156/239‑1 (MQ=255) ggCTGTACGGTGCGCACTACATCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGa < 1:842317/238‑1 (MQ=255) tGCGCACTACATCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACtttttt < 1:148458/238‑1 (MQ=255) tGCGCACTACACCAGAGTGCTGCTTGCCCGGCGTCAGGTTAATCCCCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCACCACAGCCGACGATGACTACtttttt < 2:458446/238‑1 (MQ=255) cgcACTACATCTGAGTGCTGCTTGTCCCGCGTCCGGTTACTCACCAGATACGCCTGCGGGATAAGTTCTTCGCAAGTCCCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGAGCGCTTCACGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGCGACCAGAATCACGCATGTTCAGGCGCTGGCTCACACTCTGTGCGCCACAGCCGACGCTGACCACTTTTTTAc > 2:609667/1‑238 (MQ=255) aTCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGac < 1:656143/219‑1 (MQ=255) aTCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCAACAGCCGACGATGACTACTTTTTTACCCTGAAGGt > 2:756185/1‑239 (MQ=255) cAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTa > 1:1337948/1‑238 (MQ=255) agTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCt > 2:1908327/1‑238 (MQ=255) agTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCACCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTc > 1:1730090/1‑239 (MQ=255) tgctgcTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTcgc > 2:739345/1‑239 (MQ=255) tgctgcTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCATGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTCGCTcg > 2:219942/1‑238 (MQ=255) ctgctTGTCCGGCGTCAGGTTTATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTcgcg > 2:786668/1‑238 (MQ=255) ctgctTGTCCGGCCTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGTTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTcgcg > 2:1876909/1‑238 (MQ=255) ccGGCGTCAGGATAATCACCAGATCCGCCTGAGGGCTCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGACGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCCCAGCCGACGATGACTAAGTTTTTACACTGAAGGTACCTCGCGCCATCGGCg > 2:1311444/1‑239 (MQ=255) cGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGa > 1:1296436/1‑239 (MQ=255) ttatgaccacAGATCCGCCTCTGTGATCAGTTCTTCGTAAGTACCCGCTTTAAAACCATTTTCGGTCGGTTTACGCCAGGACTCGCGCTTATCGGCATTCGCTTCTTTCCGCAGATGGTAGGAGGAATCGATCACAGAATCACGCATGTTCAGGCCCTGGTTGAGACACTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATcgc < 2:1440453/230‑1 (MQ=255) aGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATaaa > 2:1000339/1‑239 (MQ=255) tCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCACCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGc < 1:1707781/238‑1 (MQ=255) cGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGAc > 2:1469239/1‑239 (MQ=255) ccTGTGGGATCAGTTCTTCGTAAGTACCCACTTTATAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACAt > 2:316655/1‑239 (MQ=255) tgGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTGGCGCCATCGGAGAATTCATCGTGGCCCACAAAGCGACAtgtg > 2:1838524/1‑238 (MQ=255) gggATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGcc < 1:316655/239‑1 (MQ=255) aGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCCTCGCGGCCCCTAAAGCTGCATTTGCCCAGCtg > 2:337675/1‑239 (MQ=255) cGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCa > 1:435587/1‑237 (MQ=255) cGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCACCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCa > 2:1936796/1‑237 (MQ=255) ccccCTTTAAACCCAGTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGgcg < 2:1832682/239‑1 (MQ=255) cTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGa > 1:205633/1‑239 (MQ=255) tttAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATcgcg < 1:650184/192‑1 (MQ=255) tttAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATcgcg > 2:650184/1‑192 (MQ=255) ttAAAATCATTTTCGGTCGCTTTACGCCAGGACGGGCGCTTCTCGGCAACCGCTTCTTTACGCAGAGCGTATGGGATATCGAGACCAGAATCACGCTTGTTCAGGCCCTGGTTCAGACCCTGGGCGCCACAGCCGACGATGACTACTTTTTGCCCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGAtt < 2:65272/239‑1 (MQ=255) ttAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGGGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGAtt < 2:1207334/239‑1 (MQ=255) ttAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGAtt < 2:1029672/239‑1 (MQ=255) aaCCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAgt > 1:728274/1‑239 (MQ=255) aCCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAgtg < 1:822062/239‑1 (MQ=255) ttttCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTAtt > 1:1634794/1‑239 (MQ=255) ttttCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTAtt > 2:105957/1‑239 (MQ=255) ttttCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCCCAGATTCGGTGTAtt > 2:531909/1‑239 (MQ=255) ttttCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCACCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTAtt > 1:1524386/1‑239 (MQ=255) tCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAagta < 1:1314635/238‑1 (MQ=255) cTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTa > 2:1328133/1‑239 (MQ=255) cTTTACGCCAGAAAGCGCGCTTATCGGCAATCGCTTCTTTCCGCCAAGCGTAGGAGATATCGAGACCAGAATAACGCATGTTCAGGCCCTGGGTCAGACCCTGTGCCCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGCAGCCCGCGCAACCGGCGAATTCACCGCGGCCCATAAACCGTCATTCGCCCCGCTGGGCCAGCTCCAGGCGCAGAGTCAGAGTATCGAAGGAGttc > 2:96188/1‑238 (MQ=255) ggACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCCGCTGTGCCAGCTGCTGGCGCCGATCCAGGGCATTGAAGTAGTTAGCCATGGGGa > 2:1384825/1‑239 (MQ=255) gACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGAt > 2:1279847/1‑239 (MQ=255) aggcgggcTTCTCGGCAATCGCTTCGTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACAGTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGAt < 2:821213/236‑1 (MQ=255) cgcgcTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAg > 2:536258/1‑167 (MQ=255) gcTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCg < 2:1296436/238‑1 (MQ=255) tctcGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGcc > 2:162923/1‑154 (MQ=255) cGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGAtgtt < 1:1687407/239‑1 (MQ=255) cAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGAtgttgt < 1:75079/238‑1 (MQ=255) aacGCTTCTTTCCGCAGTGGGTGGGGGATATCGAGACCAGAATAACGCATGTTCGGGCCCTGGTTCAGACCCTATGCACCACATCCGACGATGACTACTTTTTTACCCAGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGct < 2:263861/237‑1 (MQ=255) tCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGct > 1:54479/1‑238 (MQ=255) tttACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTg < 1:190763/239‑1 (MQ=255) tACGCAGGGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTgtt < 2:503682/239‑1 (MQ=255) tACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCACCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTgt > 1:1601439/1‑238 (MQ=255) agagCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTgttcggt < 2:435587/238‑1 (MQ=255) agCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGACGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCCGATTCCGTGGATTGCAGTCGTTATCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTgttcggttcg > 2:1149506/1‑239 (MQ=255) agCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCACCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTgttcggttc > 2:660561/1‑238 (MQ=255) atCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGAt < 1:1246082/239‑1 (MQ=255) atCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGAt > 1:143036/1‑239 (MQ=255) cGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGa < 2:1004125/171‑1 (MQ=255) cGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTg > 1:687606/1‑239 (MQ=255) gaCCGGATTCAAGCAGGTTCATGTACAGGTTCCGACCCTGGGCGCCTCAGCCGACGATGACTGCTTTTTGACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGAGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTACTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGaa < 2:367150/238‑1 (MQ=255) gaCCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCACCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAAt > 1:59352/1‑239 (MQ=255) ccAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAAtt < 1:1609690/238‑1 (MQ=255) ccAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAAtt < 1:797152/238‑1 (MQ=255) ccAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAAtt < 1:878430/238‑1 (MQ=255) ccAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGCGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAAtt < 1:1000339/238‑1 (MQ=255) ccAGAATCAAGCATGTTCAGGCCGTGGTTCAGCCCCTGTGCGCCCCAGCCGACGATGACTACTTTTTTACCCTGACGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAAtt < 2:1573706/238‑1 (MQ=255) aaTCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACta > 1:1214338/1‑239 (MQ=255) cGCATGTTCAGGCCCTGGTTCAGACACTGTGCGCCCCAGCCGACGATGACTACTTTTTTACCCTGCAGGTAGCTCGCGCCATCGGCGAATTCCTCCCGGCCCATAAAGAGACATTTCCCCAGCTGTGCCCGCTGCCGGCGCAGATTCAGTGTATTGAAGTTGGTAGCCATGGCGATTCCCCGTGATGTTGTGCTTCTTATTGTTAGGTTCGAGCTTGCGAGATTGAAGTCACTATATg > 2:1923327/1‑238 (MQ=255) gTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGAtt < 1:1365063/141‑1 (MQ=255) gTTCAGGCCCTGGTTCAGACCCTGTGCGCAACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGATGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCGTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGACTTAATTATATGACAGGa > 2:1765739/1‑239 (MQ=255) tCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGaa < 1:939166/238‑1 (MQ=255) gCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTa > 1:1099882/1‑239 (MQ=255) ccTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGct > 1:1585647/1‑181 (MQ=255) ccTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGct < 2:1585647/181‑1 (MQ=255) ggTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAAtt > 2:419352/1‑213 (MQ=255) ggTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCg < 1:457100/239‑1 (MQ=255) tCAGACCCTGTGCACCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGa < 1:1936796/238‑1 (MQ=255) cAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGaaa < 2:1752003/239‑1 (MQ=255) cccTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGAATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGa < 2:1188931/239‑1 (MQ=255) ccTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGat < 1:28131/239‑1 (MQ=255) ccTGGGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGat < 2:1181613/239‑1 (MQ=255) tgtgCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGGTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGCCAGGAAATTTATTGCGGAAATTGatat > 2:1716087/1‑239 (MQ=255) tgtgCACCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGatat > 1:1898837/1‑239 (MQ=255) gtgCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAGGTAGGTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGatata > 2:1735055/1‑239 (MQ=255) gtgCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGCTGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGatata > 1:1775407/1‑239 (MQ=255) gtgCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGaa < 1:1836131/199‑1 (MQ=255) gtgCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGatata > 2:1654791/1‑239 (MQ=255) gcgcCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGATATAtt < 1:1024676/239‑1 (MQ=255) gcgcCACAGCCGACGAGTACTACTTTTTTACCCTGAAGGTAGCCCGCGCCATCGGCGGATTCGTCGCGGCCCATAAAGCGACATTTACCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGGGATGTTGTGCGTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGATATAtt < 2:89107/239‑1 (MQ=255) gcCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGATATATTca < 1:105957/239‑1 (MQ=255) gcCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGATATATTca < 1:967872/239‑1 (MQ=255) | TCTTTCATCAGTGGCTGTACGGTGCGCACTACATCAGAGTGCTGCTTGTCCGGCGTCAGGTTAATCACCAGATCCGCCTGTGGGATCAGTTCTTCGTAAGTACCCACTTTAAAACCATTTTCGGTCGCTTTACGCCAGGACGCGCGCTTCTCGGCAATCGCTTCTTTACGCAGAGCGTAGGAGATATCGAGACCAGAATCACGCATGTTCAGGCCCTGGTTCAGACCCTGTGCGCCACAGCCGACGATGACTACTTTTTTACCCTGAAGGTAGCTCGCGCCATCGGCGAATTCATCGCGGCCCATAAAGCGACATTTGCCCAGCTGTGCCAGCTGCTGGCGCAGATTCAGTGTATTGAAGTAGTTAGCCATGGTGATTCCTCGTGATGTTGTGCTTCTTATTGTTCGGTTCGCGTTTGCGAGATTGAATTCACTATATGACAGGAAATTTATTGCGGAAATTGATATATTCA > NC_007779/3678341‑3678812 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |