Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,746,729	A→G	5.3%	pseudogene (180/375 nt)	Y75_RS18580 ←	tryptophan permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,746,729	0	A	G	5.3%	251.9 / 2.7	77	pseudogene (180/375 nt)	Y75_RS18580	tryptophan permease
Reads supporting (aligned to +/- strand):  ref base A (63/6);  new base G (2/2);  total (66/11)
Fisher's exact test for biased strand distribution p-value = 5.69e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.97e-01

GCAAGAAGCCAGCGAATGGCTGGCTTCTTGAAGGATTTAGCCAAATTTAGGTAACACGTTAAAGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA  >  NC_007779/3746498‑3746964                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                            gCAAGAAGCCAGCGAATGGCTGGCTTCTTGAAGGATTTAGCCAAATTTAGGTAACACGTTAAAGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGa                                                                                                                                                                                                                                      >  2:487329/1‑239 (MQ=255)           aGCGAATGGCTGGCTTCTTGAAGGATTTAGCCAAATTTAGGTAACACGTTAAAGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGtaaat                                                                                                                                                                                                                            >  1:641680/1‑239 (MQ=255)                      ggctTCTTGAAGGATTTAGCCAAATTTAGGTAACACGTTAAAGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCg                                                                                                                                                                                                                 >  1:1891083/1‑239 (MQ=255)                       gctTCTTGAAGGATTTAGCCAAATTTAGGTAACACGTTAAAGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCgg                                                                                                                                                                                                                >  1:823805/1‑239 (MQ=255)                       gctTCTTGAAGGATTTAGCCAAATTTAGGTAACACGTTAAAGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCgg                                                                                                                                                                                                                >  1:2011/1‑239 (MQ=255)                         ttcttGAAGGATTTAGCCAAATTTAGGTAACACGTTAAAGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCGCCGCCGATCCCGTAAATAAAGCCGTTCGGGa                                                                                                                                                                                                              <  1:345775/239‑1 (MQ=255)                             tGAAGGATTTAGCCAAATTTAGGTAACACGTTAAAGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGTGCTTTGATTGCAAGCGCTGCGGGAATAATGACCGCCC‑A‑GCTGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGCAGa                                                                                                                                                                                                           >  2:1504296/1‑238 (MQ=255)                                   aTTTAGCAAAATTTAGGAAACACGTTAAAGACGTTGCCGAACCAGCAAAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAC‑C‑TTCTGGCGAGCTTTGATTGCAAGCCCTGGGGAAATAATGCCCGCCC‑A‑GAGGGGGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGa                                                                                                                                                                                                      <  1:1067935/237‑1 (MQ=255)                                         ccAAATTTAGGTAACACGTTAAGGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATacaaca                                                                                                                                                                                               >  1:489411/1‑238 (MQ=255)                                           aaaTTTTGGAAAAACGTAAAAGACGTTGCAGAACCACCAAAAAATCCGGGTTATACCAAAGAAAATGAAAAGCGCCGAAAAAAGTTGCCCGCCCGAGACCGTGAACATCTGATTGGGAAA‑C‑TTTTGGGGGGTTTTGATGGCAGCCACGGGGGGAATAATGGCCGCCC‑A‑GATGGTGGCGCACGGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACg                                                                                                                                                                                            <  2:415585/239‑1 (MQ=255)                                                  ggTAACACGTTAAAGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTg                                                                                                                                                                                      >  1:1630960/1‑238 (MQ=255)                                                                   gTTGCCGACCCAGCACAAAATCACGTTTATACAAAAGAGAATGACAATCGCCGAAATAAGATTGCCGCCCCAGCCCGTGAACATCTGATGGGAAAA‑C‑TTCTTGCGAGCTTGGATTCCAAGCCCTGCGGAAAAAATGCCCGCCC‑A‑GATGGTGGCGCACGCCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCa                                                                                                                                                                    <  1:124635/239‑1 (MQ=255)                                                                    ttGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGGCAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCAAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAACTAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   >  2:216771/1‑239 (MQ=255)                                                                    ttGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   >  1:1381446/1‑239 (MQ=255)                                                                    ttGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   >  1:1692286/1‑239 (MQ=255)                                                                    ttGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   >  1:203158/1‑239 (MQ=255)                                                                    ttGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   >  1:382795/1‑239 (MQ=255)                                                                    ttGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   >  1:556298/1‑239 (MQ=255)                                                                    ttGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   >  1:1433199/1‑239 (MQ=255)                                                                    ttGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   >  1:1069574/1‑239 (MQ=255)                                                                    ttGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   >  1:1015551/1‑239 (MQ=255)                                                                    ttGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCAGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAACGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   >  2:1597903/1‑239 (MQ=255)                                                                     tGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACg                                                                                                                                                                  >  1:391372/1‑239 (MQ=255)                                                                     tGCAGAAGCAACACAAAAACAGTCTTATACCAAAGAAAAGAACATGCGCAGGAATAGTGTGGCCCCCCCAGCCGGTAAACGTGTGAGTGGAACA‑C‑TTCTGGGGGTGTTTGAGCCCACGCCCTGCGAGAAGAACGACCGCAA‑A‑GGGGGGGGCGACCCGCCCGGCCCCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCAc                                                                                                                                                                   <  2:1034646/238‑1 (MQ=255)                                                                      gCCGAACCAGCACAAAATCAGGGATATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATCCAACCACGCAGGCGGCCGCAACGCTAACAGCACgg                                                                                                                                                                 >  2:1917022/1‑239 (MQ=255)                                                                      gCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGCACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGGGGCAGGAAGGTTAACAGCACgg                                                                                                                                                                 >  1:949128/1‑239 (MQ=255)                                                                       cgcaaCCAAAACAAAACCCCGGTTATACCAAAAAAAATGAAAATCGCAGAAATAAGATGGCCGCCCCAGACCGTGACCTTCTGGTTGGGAAC‑T‑TTCTTGCGGGTTTTGATGGCAAGCCCGGCGGGAATAAGGACCGCCC‑A‑GAGGGGGGCGCCCAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGt                                                                                                                                                                <  2:821761/236‑1 (MQ=255)                                                                                cacaAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGAAAGGTTAACAGCACGGTTTTGAAAc                                                                                                                                                        >  1:200749/1‑238 (MQ=255)                                                                                     aaTCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCGCCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAAcgcccg                                                                                                                                                   >  1:591124/1‑238 (MQ=255)                                                                                     aaTCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAAcgcccg                                                                                                                                                   >  1:1075443/1‑238 (MQ=255)                                                                                          cGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGCTAACAGCACGGTTTTGAAACGCCCGCCGTgg                                                                                                                                             >  2:1056051/1‑239 (MQ=255)                                                                                          cGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGCAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCgggg                                                                                                                                             >  2:459658/1‑239 (MQ=255)                                                                                               ataCCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGtt                                                                                                                                        >  1:1320301/1‑239 (MQ=255)                                                                                               ataCCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACACCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACCACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCACGCCGTGGGGGtt                                                                                                                                        >  2:1370155/1‑239 (MQ=255)                                                                                                     aaGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCaa                                                                                                                                   >  2:1036539/1‑238 (MQ=255)                                                                                                          aaTGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTaa                                                                                                                             >  1:763009/1‑239 (MQ=255)                                                                                                          aaTGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTaa                                                                                                                             >  1:1536339/1‑239 (MQ=255)                                                                                                          aaTGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTaa                                                                                                                             >  1:310916/1‑239 (MQ=255)                                                                                                          aaTGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTaa                                                                                                                             >  1:1311242/1‑239 (MQ=255)                                                                                                          aaTGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACAGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTaa                                                                                                                             >  1:372185/1‑239 (MQ=255)                                                                                                           aTGACAATCGCCGGAATAAGATTGCCGACCCAGACCGTGAACATCTGATTCGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGACCGCCACCGCAGATCCCGAAAATAAAGCAGTTCGGGAAGATCAGATACAACAACGCAAGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCGCGCCGTGGGATTTATCAATCTGaa                                                                                                                             >  2:73627/1‑238 (MQ=255)                                                                                                            tGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAAc                                                                                                                           >  1:809012/1‑239 (MQ=255)                                                                                                                 tccgcggaaaaaaGTTTGCCCCCCAAGACGGTAAACTTCTGTTGGGAAAA‑C‑TTCTGGGGAGTTTTAATTGAAACCAC‑GGGGGAAAAAAGGCCCCCC‑AGGGGGGGGGCGCACGCCCGGGCCCCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTc                                                                                                                      <  1:241088/228‑1 (MQ=255)                                                                                                                  tCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTcc                                                                                                                     >  1:1639379/1‑239 (MQ=255)                                                                                                                  tCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGAACTGCGGGAGTAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCACGCCGTGGGAGTTATCAATCTAAAACAGGTcc                                                                                                                     >  2:1697666/1‑239 (MQ=255)                                                                                                                    gCCGAAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGACGTTCGGGAAGATCAGATACAACAGCGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCGATCTTCAACAGGTCCg                                                                                                                    >  2:965998/1‑238 (MQ=255)                                                                                                                            aagttccccccccaAGCCCGTAAACAT‑TGGTTGGGAAACC‑TTTTTGGGAGTTTTGA‑TGGAACCCCCGGGGGAAAAAAGGCCCCCCAA‑GAGGGTGGCGCACACCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAAt                                                                                                           <  1:991260/229‑1 (MQ=255)                                                                                                                                ttGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGa                                                                                                        >  1:1627058/1‑238 (MQ=255)                                                                                                                                   ccgccCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGaaca                                                                                                     >  1:1008686/1‑238 (MQ=255)                                                                                                                                              cGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTg                                                                                          >  1:352017/1‑238 (MQ=255)                                                                                                                                                tGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATacaa                                                                                                                                                                                                 >  1:1304235/1‑133 (MQ=255)                                                                                                                                                tGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGac                                                                                        >  1:153354/1‑238 (MQ=255)                                                                                                                                                tGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGac                                                                                        >  2:1203842/1‑238 (MQ=255)                                                                                                                                                tGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGac                                                                                        >  1:487977/1‑238 (MQ=255)                                                                                                                                                   aacatgtgttGGGAAA‑CTTTTTTGCGATCTTTGATCGAAAGCCCGGCGGAAAAAAGGCCCGCCA‑A‑GAGGGGGGCCCACCCCCCGGCCCCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACAcc                                                                                     <  1:702480/231‑1 (MQ=255)                                                                                                                                                          aTTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGaacaa                                                                                                    >  1:358303/1‑216 (MQ=255)                                                                                                                                                               gAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTg                                                                        >  1:156095/1‑239 (MQ=255)                                                                                                                                                                      ttcttGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAAc                                                                   >  1:1498707/1‑239 (MQ=255)                                                                                                                                                                        cttGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACa                                                                  >  1:1361256/1‑238 (MQ=255)                                                                                                                                                                            cGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCCCCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGGTAACAGCAAGGTTTTGAAACGCCCGCCGGGGGAGTTATCAATCTTAAACAGTTCCGCCAGATAATCGAACAACACAAGCGTAACCCCAAAGAACGAAGTGGCAACAGCTaa                                                             >  2:170298/1‑239 (MQ=255)                                                                                                                                                                                                tGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggc                                         >  2:304506‑M1/1‑224 (MQ=255)                                                                                                                                                                                                 gCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggca                                        >  1:1624445‑M1/1‑223 (MQ=255)                                                                                                                                                                                                 gCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTCGGGGAAGATCGGATACAACAACGCAGGGGGCAGGAAGGTTACCAGCACGGTTTGGAAACGCCAGCCGGGGAGGTTATAAATCTTAAACAGGTCGGCCAGATAATCGACCACCCCAGGCGGGACACCAAAGAAGAAACTGGCAACACCTAAGTTAGagaccaccagcagcca                                        >  2:575581‑M1/1‑223 (MQ=255)                                                                                                                                                                                                      aataatGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaac                                    >  1:1424963‑M1/1‑218 (MQ=255)                                                                                                                                                                                                       ataatGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactc                                  >  1:1852065‑M1/1‑217 (MQ=255)                                                                                                                                                                                                       ataatGACCGCCC‑A‑GATGGCGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACACCAACGCAGGTGGCAGGAAGGATAACAGCACGGTTTTGAAACGCCCGCCGGGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGaaaactcacgcaggcaaaactc                                  >  2:34691‑M1/1‑217 (MQ=255)                                                                                                                                                                                                             aCCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataat                            >  2:1229593‑M1/1‑211 (MQ=255)                                                                                                                                                                                                               cGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacacaagcaggcaaaactagataatg                           >  2:1948638‑M1/1‑209 (MQ=255)                                                                                                                                                                                                                gCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgcc                         >  1:1671401‑M1/1‑208 (MQ=255)                                                                                                                                                                                                                ccccggagtgggtgccgcacgccccGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatg                           <  1:940438‑M1/229‑30 (MQ=255)                                                                                                                                                                                                                 ccc‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATACAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGATATCAATCTCAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACCCCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacactcgcaggtaaaactcgataatgccg                        >  2:202936‑M1/1‑207 (MQ=255)                                                                                                                                                                                                                 ccc‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccg                        >  1:164228‑M1/1‑207 (MQ=255)                                                                                                                                                                                                                              gcgcACAGCCCGGCGCCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaa                                       <  2:1462533‑M1/213‑18 (MQ=255)                                                                                                                                                                                                                              gcgcACAGCCCGGCGCCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaa                                       >  1:1462533‑M1/1‑196 (MQ=255)                                                                                                                                                                                                                              gcgcACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggt             >  1:137300‑M1/1‑196 (MQ=255)                                                                                                                                                                                                                                      cccGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgagga     >  2:1202539‑M1/1‑188 (MQ=255)                                                                                                                                                                                                                                         ggCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacg  >  1:729519‑M1/1‑185 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                            GCAAGAAGCCAGCGAATGGCTGGCTTCTTGAAGGATTTAGCCAAATTTAGGTAACACGTTAAAGACGTTGCCGAACCAGCACAAAATCACGGTTATACCAAAGAGAATGACAATCGCCGGAATAAGATTGCCGCCCCAGACCGTGAACATCTGATTGGGAAA‑C‑TTCTTGCGAGCTTTGATTGCAAGCACTGCGGGAATAATGACCGCCC‑A‑GATGGTGGCGCACAGCCCGGCACCGCCGATCCCGTAAATAAAGCCGTTCGGGAAGATCAGATACAACAACGCAGGTGGCAGGAAGGTTAACAGCACGGTTTTGAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA  >  NC_007779/3746498‑3746964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑