BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,140,812	T→G	7.6%	T53P (ACT→CCT)	Y75_RS20420 ←	YhfL family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,140,812	0	T	G	7.6%	330.9 / 2.3	122	T53P (ACT→CCT)	Y75_RS20420	YhfL family protein
Reads supporting (aligned to +/- strand): ref base T (71/34); new base G (2/10); total (76/46)
Fisher's exact test for biased strand distribution p-value = 9.27e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 127 total aligned reads displayed.

CAATGCATGATGAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCTATGTATTATATATTAATTAATATTCATTGATTATATGAATATAAGCAGACTGCTCGTTAAGAACGAT  >  NC_007779/4140574‑4141046

cAATGCATGATGAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGt                                                                                                                                                                                                                                             <  1:1449353/239‑1 (MQ=255)

  aTGCATGATGAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAg                                                                                                                                                                                                                                           >  1:1056346/1‑239 (MQ=255)

   tGCATGATGAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAgg                                                                                                                                                                                                                                          >  1:568095/1‑239 (MQ=255)

   tGCATGATGAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAAGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAgg                                                                                                                                                                                                                                          >  1:566754/1‑239 (MQ=255)

    gCATGATGAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑a                                                                                                                                                                                                                                        <  1:961817/239‑1 (MQ=255)

      atgatgAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑AG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑Acc                                                                                                                                                                                                                                      >  2:1933208/1‑239 (MQ=255)

        gatgaATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGAAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑CTCAGTAGG‑ACAGc                                                                                                                                                                                                                                    >  2:1747509/1‑239 (MQ=255)

           gaATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCaa                                                                                                                                                                                                                                  >  1:190620/1‑238 (MQ=255)

           gaATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCaa                                                                                                                                                                                                                                  >  1:1569756/1‑238 (MQ=255)

             atatAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAAcc                                                                                                                                                                                                                                >  2:1222464/1‑238 (MQ=255)

              tataACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCg                                                                                                                                                                                                                               >  1:351143/1‑238 (MQ=255)

                      caTATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGCATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATAC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACTGCAACCGCCAATGAtt                                                                                                                                                                                                                      >  2:1703592/1‑239 (MQ=255)

                      caTATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACTAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGAtt                                                                                                                                                                                                                      >  1:245719/1‑239 (MQ=255)

                      caTATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGAtt                                                                                                                                                                                                                      >  1:1623788/1‑239 (MQ=255)

                      caTATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGAtt                                                                                                                                                                                                                      >  1:112846/1‑239 (MQ=255)

                      caTATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGAtt                                                                                                                                                                                                                      >  1:7923/1‑239 (MQ=255)

                      caTATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGAtt                                                                                                                                                                                                                      >  2:808711/1‑239 (MQ=255)

                      caTATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGAtt                                                                                                                                                                                                                      >  2:594950/1‑239 (MQ=255)

                        tatGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCT‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGAtttt                                                                                                                                                                                                                    >  1:370793/1‑239 (MQ=255)

                        tatGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGt                                                                                                                                                                                                                                             >  1:526720/1‑215 (MQ=255)

                        tatGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGt                                                                                                                                                                                                                                             <  2:526720/215‑1 (MQ=255)

                           gatgTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTtaga                                                                                                                                                                                                                 >  1:1786500/1‑239 (MQ=255)

                               ttATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTtagaaata                                                                                                                                                                                                             >  2:133355/1‑239 (MQ=255)

                                 aTGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTtagaaataga                                                                                                                                                                                                           >  1:1605098/1‑239 (MQ=255)

                                 aTGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTtagaaataga                                                                                                                                                                                                           >  1:1939280/1‑239 (MQ=255)

                                  tGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTtagaaatagaa                                                                                                                                                                                                          >  1:1800805/1‑239 (MQ=255)

                                       tgtgGAGGAAGATGACAAAATTTCGCACAGGATCGCGCTGTGGCTAATCGATGTAGTTATCAAATTGAATTTAAATTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGAGATACAAACAAATACGCCCTC‑GTAAAATCC‑A‑GAGGGCGACGGGCAATTAAA‑CC‑GG‑GC‑TA‑AG‑CCG‑A‑TTACTGTCAGAGACTT‑ACTG‑TGCAGGAGG‑ACCGCAACCGCCAATGATTTTTGAACTATAAATTg                                                                                                                                                                                                      >  2:1627308/1‑238 (MQ=255)

                                       tgtgGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTg                                                                                                                                                                                                      >  1:1350667/1‑238 (MQ=255)

                                       tgtgGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTg                                                                                                                                                                                                      >  2:384062/1‑238 (MQ=255)

                                       tgtgGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTg                                                                                                                                                                                                      >  1:1305489/1‑238 (MQ=255)

                                       tgcggaggaCGATCACACAATTTCGCACAGGATCGCGCTGTGGCTCAAGGATGTAGTTATCAAATTGTATTTAAAGAGAAAATCTTTATAC‑GGGCGGGGGATA‑GCAGGATATAGAAACAAATACTCTCTA‑GGCATATCA‑C‑GAGGGCGACGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTCTCAGAGACTT‑ACTG‑TGCTGTAGG‑ACCGCCACCGCCAATGATTTTAGAAATAGAAATTg                                                                                                                                                                                                      >  2:744252/4‑238 (MQ=255)

                                         tgGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCg                                                                                                                                                                                                   >  1:857354/1‑239 (MQ=255)

                                         tgGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCg                                                                                                                                                                                                   >  1:382958/1‑239 (MQ=255)

                                         tgGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCg                                                                                                                                                                                                   >  1:577267/1‑239 (MQ=255)

                                            aggaAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGt                                                                                                                                                                                                >  1:676894/1‑239 (MQ=255)

                                            aggaAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑AGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGt                                                                                                                                                                                                >  1:582100/1‑239 (MQ=255)

                                            aggaAGATCACAAAATATCGCACGGGATCGCGCTGTGGCTAATGGATGTAGGTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGAGGAAA‑GAAGGACATAGAAACAAATACGCCCTC‑AGAAAATCC‑A‑GGGGGCGTCGGTCAATTAAA‑CC‑GG‑CG‑TT‑AT‑CCG‑A‑TTTCTGTAAGAACCTT‑ACCG‑TGCGTGAGG‑ACCGCAGCCGCTAATGATTTCATAAATACAATTTTCCggat                                                                                                                                                                                                >  2:777670/1‑237 (MQ=255)

                                              gaAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTgc                                                                                                                                                                                              >  1:1162470/1‑239 (MQ=255)

                                              gaAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTgc                                                                                                                                                                                              >  1:341440/1‑239 (MQ=255)

                                               aataacaaaaaaTTGCGCACAGGATCGCGCTGTGGTTAATGGTGTTATTAATAAATTTAAATTAAAAGTAAAAATTTTTTGCG‑GGGCGGGGGAAA‑GAAGGAAAAAAAAAAAAACCCCCCCGC‑GAAAAACCC‑A‑GGGGGCG‑CGGGAAAATAAA‑CCGGG‑TG‑TG‑CC‑CCG‑A‑TTTCTGTCAGAAATTT‑CTTG‑TGCGGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTgca                                                                                                                                                                                             <  2:676894/231‑1 (MQ=255)

                                                           tttCGCACAGGATCGCGCTGTGGTTAATGGATGTAGTTATAAAATTGAATTAAAAGAGAAAATTTTTTTAG‑GGGCGGGGGCAA‑AAAGGAAATAAAAACAAATCCGCCCTC‑GAAAAATCC‑A‑GAGGGCGTCGGGCAATAAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTAAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGt                                                                                                                                                                                 <  1:577815/239‑1 (MQ=255)

                                                                          cgcTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTa                                                                                                                                                                   >  1:712186/1‑238 (MQ=255)

                                                                             tgtgGATAATGGATGTAATTATAAAATTGAATTTAAAGAAAAAATATTTTAAC‑GGGGGGGGGAAA‑GAAGGAAAAAAAAACAAGTATCCCATC‑GAAAAATCC‑A‑GGGGGCGGTGGGAAATTAAA‑GT‑GG‑TG‑TT‑AG‑CCT‑T‑TTTTTTTCAGAACTTT‑AATG‑CAAAAGAGG‑CCCCAAACCGCCAATGATTTTAGAAATAGAAATTGCCAGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCa                                                                                                                                                                <  2:370793/238‑1 (MQ=255)

                                                                               tgGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACgg                                                                                                                                                             >  1:851325/1‑239 (MQ=255)

                                                                               tgGCTAATGGATGGAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑AGTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAACGTGCCGGGTGCAGCAGGTAGCCGTAAGAGCAGTTCTTATCACgg                                                                                                                                                             >  2:1614827/1‑239 (MQ=255)

                                                                                           gcaGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATg                                                                                                                                                  >  1:1815894/3‑238 (MQ=255)

                                                                                           gTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATg                                                                                                                                                  >  1:1173292/1‑238 (MQ=255)

                                                                                           gTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATg                                                                                                                                                  >  1:508049/1‑238 (MQ=255)

                                                                                           gTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATg                                                                                                                                                  >  1:692268/1‑238 (MQ=255)

                                                                                           gTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGAAGG‑ACCGCAACCGCCAATGATTTTAGCAATAGAAATTGCCGGGAGCAGCAGGTAGTCGAACGAGCAGTTATTATCACGGTTTTCactttg                                                                                                                                                  >  2:10013/1‑233 (MQ=255)

                                                                                             atttaaaaaattaaattAAAAGAAAAAATTTTTGTGC‑GGGGGGGGGAAA‑GAAGAAAATAGAAAAAAATCCCCCCTC‑GAAAAATCC‑A‑GAGGGCGTCGGGCAATAAAC‑CC‑GG‑TG‑TT‑AG‑CCG‑T‑TTTCTGTCAGAGATTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGAcc                                                                                                                                               <  1:1943403/232‑1 (MQ=255)

                                                                                             atttATAAAATTAAATTAAAAGAAAAAATATTTTAGC‑GGGGGGGGGAAA‑GAAGGAAAAAAAAAAAAACCCGCCCTC‑GAAAAACCC‑G‑GGGGGGGTCGGGAAATAAAA‑CC‑GG‑TT‑TT‑GC‑CCG‑T‑TTTTTGTCAGAGATTG‑ATTG‑TGCAGAAGC‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGAcc                                                                                                                                               <  2:576457/237‑1 (MQ=255)

                                                                                             aGTTATAAAATTAAATTAAAAAAGAAAATATTTTTAG‑GGGGGGGGAAAA‑AAAGGAAATAAAAAAAAATACCCCCTA‑GAAAAACCG‑A‑GGGGGCGGGGGGAAATAAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTAAGAGATTT‑ACTG‑TGGAGTGGG‑ACCGAAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGAcc                                                                                                                                               <  2:504210/239‑1 (MQ=255)

                                                                                                   cAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACa                                                                                                                                         >  1:655135/1‑239 (MQ=255)

                                                                                                    aaaTTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACAt                                                                                                                                        >  1:537114/1‑239 (MQ=255)

                                                                                                        tGAATTAAAAG‑AAAAATTTTTTGAG‑GGGGGGGGGGAAGGAAGAACAAAAAAACAAACCCGCCGAG‑GAAAAACCG‑A‑GGGGGGGTGGGGCAATAAAC‑CG‑GG‑TT‑TT‑AC‑CGT‑T‑TTTTTTTAAGAGTTTT‑AGTG‑GGCGGGGGG‑CCCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAg                                                                                                                                    <  2:655135/239‑1 (MQ=255)

                                                                                                             taaaaataaaaaTTTTTTTGG‑GGGGGGGGGAAA‑GAGGAAAAAAAAAAAAAATCCGCCC‑C‑AAAAAAACA‑A‑GGGGGGGGTAGGAAAAAAAA‑CCTGG‑TT‑TC‑AG‑CCA‑T‑TTTTTGTCAGATGCTT‑TTGG‑GGCGGTAGC‑ACCAAAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAAc                                                                                                                               <  2:1305489/231‑1 (MQ=255)

                                                                                                             taaaaGTAAAAATTTTTTTGC‑GGGGGGGGGAAA‑GAAGAAAAAAAAAAAAAAGCCCCCCTG‑GAAAAATCC‑A‑GAGGGCGTCGGGCAATAAAC‑CG‑GG‑TG‑TT‑AG‑CCG‑T‑TTTCTGTCAGAGATTT‑ACTG‑TCCAGTGGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAAc                                                                                                                               <  1:1602509/237‑1 (MQ=255)

                                                                                                                   tGAAAATTTTTTTGC‑GGGGGGGGGCAA‑AAAGAACAAAGAAAAAAAAACCCCCTC‑GAAAAATCG‑A‑GGGGGCGTGGGGAAATAAAC‑CC‑GT‑TT‑TT‑AG‑CCT‑A‑TTTCTGTCAAAAATTT‑GGTG‑TGCATTAGG‑ACCCCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGc                                                                                                                          <  1:1703592/238‑1 (MQ=255)

                                                                                                                    aaaaaTATTTTGAG‑GGGGGGGGACAA‑GAAGGACATAGAAACAAATACCCCCTC‑GAAAACCCC‑A‑GGGGGTGTCGGACAATTAAC‑CC‑GG‑TT‑TT‑AG‑CCG‑T‑TTTCTTTCAGAGACTT‑CCTG‑TGCAGTGGG‑CCCACAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGc                                                                                                                          <  1:1539651/236‑1 (MQ=255)

                                                                                                                     gaaaTTTTTTTGCGGGGGGGGGGAAA‑GAAGAAAAAGAAAAAAAATCCCCCCTG‑GAAAAACAC‑A‑GGGGGCG‑CGGTGAAATAAA‑AC‑TG‑TA‑TTAAG‑GAG‑A‑TTTCGGTAAGAGA‑TT‑TCTGTTGGAGGAGC‑CCCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGc                                                                                                                          <  1:1571875/236‑1 (MQ=255)

                                                                                                                     aaaaattttttGG‑GGGGGGGGGGAA‑GAA‑GAAACAAAAAAAAAAACGCCCCCTGAAAAACCC‑G‑GGGGGGGGGGGGAAAATAAA‑CC‑GGTTG‑TA‑AG‑CCT‑T‑TTTCTTTCAGA‑ACTTGATTG‑TGAGGTGGG‑CCCCCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGc                                                                                                                          <  1:384062/231‑1 (MQ=255)

                                                                                                                       attatTTTTAG‑GGGGGGGGGCAA‑GAGGGAAATAAAAAAAAATCCCCCCTC‑GGAAAATCC‑G‑GAGGGCGGCGGGAAATAAAA‑CG‑GG‑TT‑TT‑AG‑CCT‑T‑TTTCTGTCAAAGATTT‑CTTG‑TGTATTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTa                                                                                                                     <  1:808711/237‑1 (MQ=255)

                                                                                                                        atttttttaggggggggggGAAA‑AAAGGAAAAAAAAAAAAACCCCCCCT‑‑GGAAAAACC‑A‑GGGGGGGTCCGGGAAATAAA‑CCGGG‑TT‑TG‑AG‑CCG‑T‑TTTCTGTAAGAGATTT‑ATTG‑TGCATTGGG‑CCCGAAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTa                                                                                                                     <  1:1933208/228‑1 (MQ=255)

                                                                                                                        aattttttgggggggggggGAAA‑GAAGGAAAAAAAAAAAAATCCCCCCTC‑GAAAAACCC‑A‑GGGGGCGCCGGGCAATTACC‑CC‑GT‑TG‑TT‑AG‑CCG‑T‑TTTCTGTCAGAGATTT‑ACTG‑TGCAGTAGG‑CCCGAAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTa                                                                                                                     <  1:107325/228‑1 (MQ=255)

                                                                                                                        aattgttgtggggggggggGAAA‑GAAGAACAAAGAAACAAAGCCCCCCTC‑GAAAACCCG‑A‑GGGGGCGGGGGACAA‑AAAA‑CC‑GG‑GGTTT‑AC‑GTT‑A‑TTTCTGTGAGATACTT‑AGTG‑CGCAGTAGG‑CCCGCACCCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTa                                                                                                                     <  2:1561335/228‑1 (MQ=255)

                                                                                                                                   ggggggggGCAA‑GAAGAACATAGACAAAAATGCGCCCTC‑GGAAAATCC‑A‑GGGGGTGGCGGGAAATTAAC‑CG‑GG‑GG‑TT‑AC‑CGG‑T‑TTTTTGTCAGAGACTT‑ATTG‑TGCAGTAGC‑ACCCAACCCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTAc                                                                                                           <  1:1745671/238‑1 (MQ=255)

                                                                                                                                    ggcgggGGCAA‑GCAGGACTTCGACACAAATACGCCGTC‑GGAAAATCC‑A‑GAGGGCGTCGGGTAATTACA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTACTGTAAGAGACGT‑ATTG‑TGCAGTAGG‑ACCGCACCCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCAGGGTTTTTAATATGAGCAGTACATGCTGTTAACGTATCAAGTACTTCATCTACCa                                                                                                         >  2:1743056/1‑239 (MQ=255)

                                                                                                                                        ggggGAA‑GAAAGACAAAAAAAAAAAACCCGCCCG‑GGAAAATCCGA‑GGGGGGGGCGGGAAATAAAA‑CT‑GG‑T‑‑TT‑AGCCCT‑A‑TTTCTGTCAAAGATTT‑AGGG‑GGGAGGAGG‑CCCGAAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGt                                                                                                       <  2:1786500/238‑1 (MQ=255)

                                                                                                                                        ggggCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGc                                                                                                     >  1:853074/1‑239 (MQ=255)

                                                                                                                                                      cATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAAt                                                                                        >  1:1721395/1‑239 (MQ=255)

                                                                                                                                                       aTAAAAAAAAATGCCCCATC‑GAAAAAGCC‑G‑GGGGGCGTCGGTAAATAAAA‑CC‑TG‑TG‑TT‑GC‑CCG‑T‑TTTCGGTAAGAGTCTT‑CCTG‑TGGAGTAGG‑CCCGCATCCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTTCTGCACCTACCAGTGCAACTTTAATAAAtt                                                                                       <  1:1776227/239‑1 (MQ=255)

                                                                                                                                                        tAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCTCGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAAttt                                                                                      >  1:860470/1‑239 (MQ=255)

                                                                                                                                                             aCAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCa                                                                                 >  1:293233/1‑239 (MQ=255)

                                                                                                                                                                  cgcccccTC‑GAAAAACCC‑A‑GAGGGAGT‑GGGGAAATAAA‑CC‑GGTTG‑TT‑CG‑CCT‑A‑TTTCTGTCAGAGATTT‑ACTG‑TGCATTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTAc                                                                            <  1:945824/235‑1 (MQ=255)

                                                                                                                                                                   ccGCCCTC‑GAAAAACCC‑A‑GGGGGCG‑CGGGAAAATAAACCC‑GG‑TG‑TT‑‑G‑CCGTT‑TTTCTGTAAAAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACa                                                                           <  1:578334/238‑1 (MQ=255)

                                                                                                                                                                    cccccTC‑GAAAAATCG‑A‑GGGGGCGTGGGGAAATAAAC‑CG‑GG‑TT‑TT‑AC‑CCT‑T‑TTTCTGTCAGAGATTT‑ACTG‑TGCGTTAGG‑CCCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACAt                                                                          <  1:1747509/237‑1 (MQ=255)

                                                                                                                                                                    ccaccTC‑GGAAAAGTA‑G‑GGGGGCGTGGGGCAATGAAC‑CC‑GG‑TG‑GT‑CG‑GTG‑T‑TTTCT‑TTATAGATTT‑TCGG‑TGGAGGAGGCACCAGATCCGCCAATGATTTTAGAAATAGAAATGGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACAt                                                                          <  2:1173292/236‑1 (MQ=255)

                                                                                                                                                                    acgccacaggAAAACCC‑G‑GGGGGCTTCTGGCAATTAAC‑CC‑GT‑TT‑TT‑CG‑CCG‑T‑TTTTTGTGAACTATTT‑ATGT‑TGAAGTAGG‑CCCCAACCCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACa                                                                           <  2:367152/231‑1 (MQ=255)

                                                                                                                                                                       ccTC‑GGAAAATCG‑A‑GAGGGCGTCGCGC‑ATTAAA‑CC‑GG‑TT‑TTGAG‑CCT‑T‑TTTCTGTCAGAGACTT‑TGTG‑TGCAGTGGG‑CCCGAAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTcc                                                                       <  1:451981/239‑1 (MQ=255)

                                                                                                                                                                          tggaaaaaTCA‑A‑GAGGGGGTCGGGAAATAAAA‑CG‑GG‑TG‑TT‑GG‑CCG‑T‑TTTCTGTAAGAGATTT‑CCTG‑GGAAGTAGG‑CCCGAAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCt                                                                     <  1:133355/235‑1 (MQ=255)

                                                                                                                                                                          tggaaaaaCCG‑A‑GGGGGGGTGGGGAAATAAAA‑CC‑GG‑TG‑TT‑AG‑CGT‑A‑TTTCTGTCAGAGACTT‑ATGG‑GGCAGTGGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCt                                                                     <  1:1222464/235‑1 (MQ=255)

                                                                                                                                                                          tggaaaaaCCC‑A‑GAGGGCG‑CGGGAAAATAAACCC‑GG‑TG‑TT‑AG‑CCG‑T‑TTTCTGTAGGAGATTT‑GCTG‑TGGAGTAGC‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCt                                                                     <  1:1087470/235‑1 (MQ=255)

                                                                                                                                                                           tggAAAACCC‑C‑GGGGGGGGCGGGGAAATTAA‑CC‑GGTTG‑TT‑AG‑CCG‑T‑TTTCTGTAAGATACTT‑AGTG‑TGCAGTAGG‑CCCGAAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCt                                                                     <  1:594950/238‑1 (MQ=255)

                                                                                                                                                                           gcgAAAATCC‑AGGGGGGCGCGGGGAAATTAAC‑CC‑GG‑TG‑TT‑‑G‑CCG‑ATTTTTTATAGGAGTTGT‑ACGG‑TGCGGTGGA‑CCCGAACCCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCt                                                                     <  2:712026/237‑1 (MQ=255)

                                                                                                                                                                              gaaagagcaggagGGCGTGGGGAAATAAAA‑CG‑GT‑TG‑TT‑GG‑CCG‑T‑TTTCTGTCAGAGATTT‑AGTG‑GGAAGGGGA‑ACAGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCTa                                                                    <  2:1761677/228‑1 (MQ=255)

                                                                                                                                                                               aaacac‑A‑GGGGGCGTGGGGAAATGAAA‑CC‑GG‑TG‑TT‑TG‑CAT‑T‑TTTCTGTGAGAGTGTT‑ACTG‑TAAAGAAGG‑CCCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCTATGta                                                                <  1:10013/234‑1 (MQ=255)

                                                                                                                                                                                              gTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACt                                                                                                 >  1:1863025/1‑193 (MQ=255)

                                                                                                                                                                                                      tatAAA‑CC‑GG‑TG‑TT‑TG‑CCG‑T‑TTTCTGTAAGATACTT‑GTTG‑TGCAGTGTG‑ACCGAAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCTATGTATTATATATTAATTAATATTCa                                           <  1:1743056/237‑1 (MQ=255)

                                                                                                                                                                                                       ataaaccc‑GG‑TG‑TT‑AG‑CTG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCTATGTATTATATATTAATTAATATTCa                                           <  1:517568/233‑1 (MQ=255)

                                                                                                                                                                                                         aaa‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATATATTTGTTCATTTACATTCCCTATGTATTATATATTAATTAATATTCATTg                                        >  1:1778849/1‑239 (MQ=255)

                                                                                                                                                                                                                 g‑tg‑tT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCa                                                                                                                >  1:184716/1‑161 (MQ=255)

                                                                                                                                                                                                                 g‑tg‑tT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCTATGTATTATATATTAATTAATATTCATTGATtata                                  >  2:1547700/1‑239 (MQ=255)

                                                                                                                                                                                                                    g‑tT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTAc                                                                                                           >  1:1707522/1‑164 (MQ=255)

                                                                                                                                                                                                                                  tttCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCTATGtatta                                                             >  1:1504407/1‑201 (MQ=255)

                                                                                                                                                                                                                                                        tgCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCTATGTATtata                                                           >  1:915336/1‑183 (MQ=255)

                                                                                                                                                                                                                                                          cAGTAGG‑ACCGGAACCGCCAATGGTTTTAGAAATCGAACTGGCAGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATAACGGCATTCTATATGACTAGTACATGCAGTTAACGTAGCCAGTACTGCACCTAACACGGCACCTTTAATAAATTTGTCCATTTACATGCGCTATGTATTAGGTCTTAATTACTATTCATTCATTATATGAATATAAGCAGACTGCTCGTTAAGACCGac  >  2:1364013/1‑237 (MQ=255)

                                                                                                                                                                                                                                                            gTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGAcc                                                                                                                                               >  1:1362266/1‑95 (MQ=255)

                                                                                                                                                                                                                                                             tAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTtaa                                                                                             >  2:467419/1‑144 (MQ=255)

                                                                                                                                                                                                                                                             tAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTtaa                                                                                             <  1:467419/144‑1 (MQ=255)

CAATGCATGATGAATATAACAACATATGATGTTATGTAATGTGGAGGAAGATCACAAAATTTCGCACAGGATCGCGCTGTGGCTAATGGATGTAGTTATCAAATTGAATTTAAAGTGAAAATATTTTTAC‑GGGCGGGGGCAA‑GAAGGACATAGAAACAAATACGCCCTC‑GGAAAATCC‑A‑GAGGGCGTCGGGCAATTAAA‑CC‑GG‑TG‑TT‑AG‑CCG‑A‑TTTCTGTCAGAGACTT‑ACTG‑TGCAGTAGG‑ACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGCAGTTCTTATCACGGTTTTCAATATGACCAGTACATGCAGTTAACGTAGCCAGTACTGCACCTACCAGTGCAACTTTAATAAATTTGTTCATTTACATTCCCTATGTATTATATATTAATTAATATTCATTGATTATATGAATATAAGCAGACTGCTCGTTAAGAACGAT  >  NC_007779/4140574‑4141046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`