| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 4,179,639 | T→G | 16.8% | T321P (ACC→CCC) | gspF ← | type II secretion system inner membrane protein GspF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 4,179,639 | 0 | T | G | 16.8% | 269.5 / 3.2 | 98 | T321P (ACC→CCC) | gspF | type II secretion system inner membrane protein GspF |
| Reads supporting (aligned to +/- strand): ref base T (4/72); new base G (18/2); total (24/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.19e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 103 total aligned reads displayed.
CTTAATTAATCATTGAGTTAAGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCGGGCCGATGAGCGCAACGCGCAGCAACATGGCATGAAAACGGTG > NC_007779/4179402‑4179873 | cTTAATTAATCATTGAGTTAAGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGTGGtt > 1:1783426/1‑239 (MQ=255)cTTAATTAATCATTGAGTTAAGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGtt > 1:1475110/1‑239 (MQ=255) aattaatCATTGAGTTAAGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GGCGGAAAT‑TGCGGtttt > 2:110147/1‑238 (MQ=255) cATTGAGTTAAGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAT‑TTCGGgtt‑gtttccgc > 1:68316/1‑233 (MQ=255) aTTGAGTTAAGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑TAAAAT‑TGCGGTTT‑GTTCCAGCGa < 1:1699834/239‑1 (MQ=255) aGTTAAGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAATGAGCGG‑TT‑GTTCACGCGAAAGa > 2:1231885/1‑239 (MQ=255) tAAGTTGAGGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGa < 2:1209606/239‑1 (MQ=255) tAAGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGa < 2:1851017/239‑1 (MQ=255) aaGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGaa < 2:814534/239‑1 (MQ=255) aaGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGaa < 2:1648748/239‑1 (MQ=255) aaGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGaa < 2:412014/239‑1 (MQ=255) aaGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGaa < 2:4870/239‑1 (MQ=255) aaGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCCTAATAATGTGTCCTGGCAAGAAGAGGGAGAGCTGTAATGCGATCCGATTTTCTGGGAGTGTCTTCTGGTTATCTGCGGCTCCGACCATTAATGTGCCGAGCTGCCCGCTTTTGGCGCCAGATGCCACCATGTAGCGCATCATCGGC‑TG‑GCAAAC‑ATCTGTTT‑GTTCCAGCGAAAGATGaa < 2:1568165/239‑1 (MQ=255) aGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAT‑TTCGGGTT‑GTTTCCGCGAAAGATGaaa > 1:152702/1‑238 (MQ=255) aGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAA‑TAGGGGTT‑GTTTCCCCGCAAGAGGAAt > 2:259667/1‑239 (MQ=255) ttGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGa < 1:1940683/228‑1 (MQ=255) gaagaaGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTg < 1:985103/239‑1 (MQ=255) aagaagAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAT‑TTCGGTTTGGTTCCA‑CGCAAAAAGGATGCTGt > 2:269172/1‑239 (MQ=255) agaagaGTGTGGGGTAGCGCTACGACAATAAACATGAAGATCAGTGCCATCATAAGAATGAGTGCAGGCTCGAAGATTGGTATCTTTAAGGCGATCCGAGTTTGGTTGTGTGTCGCCTGTTTATCTGCGGCTCTGACCATTAATGTGCCGAGTTGCCCGCTTTTTTCGACAGAGGCCACCATGTAGTGCGTCGTCGGC‑GG‑GAAAAT‑TGCTGTTT‑GTTCCAGCGAAAGATGAATGCTGt < 2:1311489/238‑1 (MQ=255) gaagaGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAA‑TGCGGGTT‑GTTTCCGCGAAAGATGAATGCTGtt > 1:722794/1‑238 (MQ=255) gaagaGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAA‑TGCGGTTT‑GTTTCCGCGGAAGAAGAATGCTGtt > 1:918510/1‑238 (MQ=255) agagGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTa < 1:321285/237‑1 (MQ=255) tGGGGTACCGACACGACAATAAACAGGACGATCAGTGACATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGc < 2:1894564/238‑1 (MQ=255) ccGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAT‑TTGCGCTT‑GTTTCCTCGAAAGAAGGATGCTGTTT‑GCCCTGCGAACgc > 2:236194/1‑236 (MQ=255) cgacacgacaATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTtct < 1:1120730/239‑1 (MQ=255) cacgacaATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTg < 1:552866/239‑1 (MQ=255) acaATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAA‑TTCGGGTT‑GTTCCAACCAAAAAAGAAAGCTTTTACCCCCGGCGAA‑GTTCTCTTcct > 1:88182/1‑237 (MQ=255) aaTAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCAt < 2:1222713/239‑1 (MQ=255) gACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAGAAT‑TGGGGTTT‑GTTCTTACGAAAAATGAATAGTGTTA‑CACACGCGTGAGTTTTCTGCCGCACTTGTCCGAc > 1:1440328/1‑239 (MQ=255) gACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGa < 1:1764331/238‑1 (MQ=255) aTCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACg < 1:166853/236‑1 (MQ=255) cAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGc < 1:236194/239‑1 (MQ=255) tCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAA‑TGCGGGTT‑GTTTCCGCGAAAAAAGAAAGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCCTTTGCCCGACGCCGGC‑GAATTTCg > 1:763038/1‑239 (MQ=255) cGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGCGGG‑GAAAAT‑TCGGGTTT‑TTTCCGCCGAAA‑ATGAAAGCTGTTT‑CCCTTGCGGAAGGTTTCTTCCCCCATTTCCCGACGCCTGC‑GAAATTCGa > 1:355521/1‑239 (MQ=255) cGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAA‑TGCGGGTT‑TTTTCCGCGCAAAAAGAAAGGTGTTT‑CCCTCGCGGACGTTCTCTTCCGCCTTTGCCCGAAGCCGGCGGAAtttga > 1:313959/1‑237 (MQ=255) taataaTGAGTGCTGGTTCGAAGTTGGAGGCCGTTAAGGCGATCCGATTTTGTTGGGGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGATCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAg < 2:1218879/238‑1 (MQ=255) aataatGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAgg < 1:1130179/238‑1 (MQ=255) atGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCATACGCTGGC‑GAATTTCGAGgttgtt < 1:953298/239‑1 (MQ=255) aGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGGTT‑GTTCCAGCGGAAAATGAATGCTGTTA‑CCCCGGCGGACGTTCTCTGCCGCATTTGCCAGACGCAGGG‑GGAATTCGAGgttgtttgg > 1:1819504/1‑236 (MQ=255) tGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAA‑TTCGGGTT‑GTTTCCGCGAAAAAAGAATGCTGTTT‑CCCCTGCGGACGGTCTCTTCCCCCTTTGCCCGACGCCGGC‑GGAATTTGAGggtgtttgggg > 1:354424/1‑234 (MQ=255) gCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCt < 1:1458169/239‑1 (MQ=255) gCTCGAAGATGGCGTGCGTCAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCCGCTCTGACCATTAATGTGCCGAGCTGCAAGCTTTTTTCGCCAGAGGCCACCATGTAGTGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGACAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCTGCATTGGCCATACGCTGGC‑GAATTCCGAGGTTGTTGCGGCTTTCg < 2:447893/239‑1 (MQ=255) tCGAAGATGGAGGGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCgg < 2:135774/238‑1 (MQ=255) tCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCgg < 2:1783426/238‑1 (MQ=255) aaGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAA‑TTCGGGTT‑GTTTCAGCGAAAAAAGAAAGCTGTTT‑ACCCGGCGAAAGTTCTCTTCCGCCTTTTCCCGACGCCGGC‑GGAATTTGGGGGTGTTTAGGGCTTCTGTggg > 1:499073/1‑238 (MQ=255) aGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGa < 2:429446/238‑1 (MQ=255) aGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGa < 1:1108648/238‑1 (MQ=255) ggAGAGCGTTAAGGCGTATCGATTTTGGTGGAGTGTCGCCTGGTGATCTTCGGCTGTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑GGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAAt < 2:1865228/239‑1 (MQ=255) cGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAT‑TTTGGGTT‑TTTCCCGCGCAAGATGGATGTTGGTT‑CCCAGGCGCAAGTTCTCTGCCGCCCTTGCCAGACGCTGGG‑GAATTTTGAGGTGGTTTTGGGTTTTCGTGGGAGAATTcatc > 2:924600/1‑238 (MQ=255) cGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTcatc < 2:677964/238‑1 (MQ=255) tAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTcatccca < 1:1505201/238‑1 (MQ=255) tAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTcatccca < 1:820893/238‑1 (MQ=255) tAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTcatccca < 1:1729973/238‑1 (MQ=255) tAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTcatccca < 1:1872103/238‑1 (MQ=255) cGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCcag < 1:1656848/238‑1 (MQ=255) aTCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TACGGGGT‑GTTCCTGCGAAAGATGAATGATGTTA‑CCCCGGCGAACGTTCTCTGCCGCCGTTTCCCGACGCTGTG‑GAGGTTCGTGGGGGTTGAGGCGTTCTTTGGAGCAATTCATCACACCcagccg > 2:1409584/1‑237 (MQ=255) ttttGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGa < 1:1141238/238‑1 (MQ=255) ttttGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGa < 2:202869/238‑1 (MQ=255) ttttGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGa < 1:45898/238‑1 (MQ=255) ttttGTTGGAGTGTCTCCTGGTTATCTGCGGCTCCGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGa < 1:271684/238‑1 (MQ=255) tgtgttggtggtgtCGCCAGGTTATCTACGGCGTGGACCATGAATGTCCCGTGCTGCCCGCCTTTTGCGCAAGAGGCCGCAATGGGGAGCATCTGCGGG‑AG‑GAAAAG‑TGGGGGTT‑GTTCCAGCGAAAGATGATTGTTGATT‑TCGTGGAGTGCGTGCTGACCAGCTTCTGACAGACGCTGGT‑GAATTTCGAGGTTGTTGAGGTTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGa < 2:1540437/228‑1 (MQ=255) gttgGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGAcgccg < 2:286675/239‑1 (MQ=255) gttgGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGAcgccg < 1:316314/239‑1 (MQ=255) tgGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCAACGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGAcgccgc < 1:1033053/238‑1 (MQ=255) gtgtCTTCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGTCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACGAATTCATCCCATCCAGCAGAGGGACGCCGCTGGa < 1:58427/238‑1 (MQ=255) tcctcctcGTTATCTGCGGGTCTGAGCATTAATGTGCCGAGCGGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATTATAGGC‑GT‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAATATGAATGCTGTTC‑CCCTGGCGGACGTTTTCTGCGGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGAtt < 2:1506227/236‑1 (MQ=255) tcCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCaa < 1:205281/239‑1 (MQ=255) tcCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCaa < 2:1475110/239‑1 (MQ=255) cTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCaaaa < 1:1381376/239‑1 (MQ=255) ggTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGGTT‑GTTTCAGCGAAAGATGAATGCTGTTT‑CCCCGGCGGACGGTCTCTGCCGCATTTTCCAGACGCCGGC‑GAATTTCGGGGTTGTTGGGGGTTTCGGGGGGCAAATTCATCCCATCCAGCAGAGGGGCGCCGCTGGAGTGGAAAATa > 1:605068/1‑239 (MQ=255) aTCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TTCGGGTT‑GTTCCAGCGAAAGAAGAATGCTGTTA‑CCCTGGCGAAAGTTCTCTGCCGCCTTTGCCAGACGCCGGC‑GAATTTTGAGGGTGTTGTGGCTTTTGGTGGACAAAATCATCCCATCCAGCAGAGGGACGCCGCTGGAGTGGAAAAAACTTa > 1:537219/1‑239 (MQ=255) tCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTaa < 1:1200040/239‑1 (MQ=255) tCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTaa < 1:484758/239‑1 (MQ=255) cTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGGTT‑GTTTCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGGTGTTGAGGGTTTCGGTGGACAAATTCATCCCATCCCGCAGAGGGACGCCGCTGGATTGCAAAATAATTaaa > 1:1159218/1‑239 (MQ=255) tGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAg < 1:1606101/239‑1 (MQ=255) gCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAA‑TGCGGGTT‑GTTTCAGCGAAAAAAGAATGCTGTTA‑CCCTGGCGAACGGTCTCTGCCGCATTTTCCAGACGCTGGC‑GGATTTCGAGGGTGTTTGGGCTTTTGGGGGGCAAAATTATCCCATCCAGCAGAGGGGAGCCGCTGGGGTGCAAAATAATTAAAga > 1:1733034/1‑238 (MQ=255) ggCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTg < 1:1276174/238‑1 (MQ=255) aTTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCg < 1:817240/239‑1 (MQ=255) tAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTg < 1:146791/239‑1 (MQ=255) aaTGTGCCGAGCTGCCCGCTTTTTTCGCCCTAGGCCACCATGTAGGGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGTACGTTCTCTGCCGCATGTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTTGACACATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATTGCGTgc < 2:1440328/239‑1 (MQ=255) aaTGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTgc < 1:840360/239‑1 (MQ=255) aaTGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTgc < 1:1506859/239‑1 (MQ=255) tgCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAT‑TTCGGGTT‑GTTCCAGCCAAAGATGAAAGCTGGTT‑CCCTGGCGGACGTTCTCTGCCCCCTTTGCCAGACGCTGGCGGAATTTCAGGGTGGTTG‑GGGTTTTGGGGGGCACAATTAACCCCTCCCGCCGAGGGAAGGCGCCGGGTGGCAAAAAAATTAAAAAGACGAAGTAGCGTgcgcgg > 2:840360/1‑237 (MQ=255) tgCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAA‑TGCGGGTT‑GTTCCCGCGAAAAATGAAAGCTGTTA‑CCCTGGCGAACGGTCTCTGCCGCATTTGCCAGACGCTGGC‑GAAATTTGGGGGTGTTGAGGGTTTTGGTGGGCAAATTCATCCCATCCAGCAGAGGGGCGCCGCTGGGGTGCAAAATACTTTAAATGCGGGGATAGCGGgc > 1:66998/1‑235 (MQ=255) ccGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GGAAAA‑TGCGGGTT‑GTTTCCCCGGAAAAAGGAAGCTGTTT‑ACCCGGCGAACGTTTTCTGCCGCATTTTCCAGACGCTGGG‑GGAATTTTAGGGTGTTTAGGGCTTTGGTGGGCAAAATCATTCCACCCACGAGAGGGGCGCCGCCGGGTTGCAGAATAATTAAAGAGCGGGGATAggtggcggcgtt > 2:1149224/1‑228 (MQ=255) tGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATgg < 1:156586/238‑1 (MQ=255) tGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGgc < 1:209552/239‑1 (MQ=255) tttttCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGACTGCTGTTC‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGATTGTTGAGGCTTTCGGTGGACAAATTCATCCCAGCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAACCa < 2:1572128/239‑1 (MQ=255) tttCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGc < 1:793478/239‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCggg < 1:1258013/239‑1 (MQ=255) cGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCggg < 1:269172/239‑1 (MQ=255) caccaTTTATAGCATCATCAGC‑GG‑TAGAAT‑TGCGGTTT‑GTTCCATCGAAAGATGAATGCTGTTA‑CCCTGTCTAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATTGCGCAAATCAGCGGGCCGATGAgcg < 2:1602919/239‑1 (MQ=255) ccaTGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCGGGCCGATGAGCGCa < 2:313959/239‑1 (MQ=255) ccaTGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCGGGCCGATGAGCGCa < 2:355521/239‑1 (MQ=255) caTGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCGGGCCGATGAGCGCaa < 2:705877/239‑1 (MQ=255) caTGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCGGGCCGATGAGCGCaa < 1:313719/239‑1 (MQ=255) gTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCa < 2:836273/82‑1 (MQ=255) agagCATCATCGGC‑GG‑GAAAAT‑TGCGGGTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCGGGCCGATGAGCGCAAcgcg < 1:1409584/238‑1 (MQ=255) catcGGC‑GG‑GAAAAT‑TGCGTTTT‑GTTCCAGCGAATGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCGGGCCGATGAGCGCAACGCGCAGCAACa < 1:1709944/239‑1 (MQ=255) gCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCGGGCCGATGAGCGCAACGCGCAGCAACATGGCATGAAAACGGTg < 2:1944993/239‑1 (MQ=255) | CTTAATTAATCATTGAGTTAAGTTGAAGAAGAGGTTGGAGTACCGACACGACAATAAACAGGACGATCAGTGCCATCGTAATAATGAGTGCTGGCTCGAAGATGGAGAGCGTTAAGGCGATCCGATTTTGTTGGAGTGTCTCCTGGTTATCTGCGGCTCTGACCATTAATGTGCCGAGCTGCCCGCTTTTTTCGCCAGAGGCCACCATGTAGAGCATCATCGGC‑GG‑GAAAAT‑TGCGGTTT‑GTTCCAGCGAAAGATGAATGCTGTTA‑CCCTGGCGAACGTTCTCTGCCGCATTTGCCAGACGCTGGC‑GAATTTCGAGGTTGTTGAGGCTTTCGGTGGACAAATTCATCCCATCCAGCAGAGGGACGCCGCTGGATTGCAAAATACTTAAAGTGCGGAGATAGCGTGCGCTGTTAATGGCGCAAATCAGCGGGCCGATGAGCGCAACGCGCAGCAACATGGCATGAAAACGGTG > NC_007779/4179402‑4179873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |