BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,273,205	T→G	19.2%	F68V (TTT→GTT)	Y75_RS21155 →	acid phosphatase AphA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,273,205	0	T	G	19.2%	301.3 / 14.6	140	F68V (TTT→GTT)	Y75_RS21155	acid phosphatase AphA
Reads supporting (aligned to +/- strand): ref base T (49/58); new base G (31/2); total (80/60)
Fisher's exact test for biased strand distribution p-value = 2.32e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 142 total aligned reads displayed.

TAAAAAGTTTCAACATACTGACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGG  >  NC_007779/4272967‑4273442

tAAAAAGTTTCAACATACTGACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGt                                                                                                                                                                                                                                                   >  1:732232/1‑239 (MQ=255)

        ttCAACATACTGACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATc                                                                                                                                                                                                                                           >  2:1016381/1‑239 (MQ=255)

         tCAACATACTGACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCg                                                                                                                                                                                                                                          >  1:815900/1‑239 (MQ=255)

          cAACATACTGACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGa                                                                                                                                                                                                                                         <  1:1805930/239‑1 (MQ=255)

          cAACATACTGACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGa                                                                                                                                                                                                                                         <  1:1453418/239‑1 (MQ=255)

          cAACATACTGACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATCGa                                                                                                                                                                                                                                         >  1:1650735/1‑239 (MQ=255)

             cATACTGACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGa                                                                                                                                                                                                                                      <  1:1016381/239‑1 (MQ=255)

                  tGACTATTTAGGTAAAAATATGCGCAAAATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATGGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑gg                                                                                                                                                                                                                                <  2:64579/239‑1 (MQ=255)

                  tGACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑gg                                                                                                                                                                                                                                <  2:732232/239‑1 (MQ=255)

                   gACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGt                                                                                                                                                                                                                               >  1:465331/1‑239 (MQ=255)

                    aCTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATTTCGTTGACAC‑GGt                                                                                                                                                                                                                               >  1:738212/1‑238 (MQ=255)

                    aCTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCAGCCAATGGCGGTGGGGTTTTAAATCTATGACAC‑GGt                                                                                                                                                                                                                               >  2:492189/1‑238 (MQ=255)

                           aGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑ttttt                                                                                                                                                                                                                       >  1:742684/1‑238 (MQ=255)

                            gggAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑tttttt                                                                                                                                                                                                                      >  1:1355266/1‑238 (MQ=255)

                                 aaaTATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTc                                                                                                                                                                                                                <  1:186755/239‑1 (MQ=255)

                                                  cacaGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATCGATGACAC‑GGGAC‑TTTTTTTCAGTCCGGGCTTCTGGCGC‑GGc                                                                                                                                                                                              >  1:1921915/1‑239 (MQ=255)

                                                  cacaGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGGGGGGGTTGATATCGATGACAC‑GGGAC‑CTTTTTCCAGTCCGGGCCTTCGGCGC‑GGc                                                                                                                                                                                              >  1:636210/1‑239 (MQ=255)

                                                     aGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATAACGGTTAGAC‑GGTAC‑TTTTTTCTACGGCGGGCTTCTTGCGC‑GGCtaa                                                                                                                                                                                           >  1:304399/1‑239 (MQ=255)

                                                     aGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATTGATGGCAC‑GGTAC‑TTTTTTCCAGCTCCGGCTTCTGGAGC‑gggcaa                                                                                                                                                                                           >  1:234474/1‑235 (MQ=255)

                                                       gCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATTGATGACCCAGGACC‑TTTTTTCAAGTCCGGCCTAC‑GGCGC‑GGTcaaaa                                                                                                                                                                                         >  2:1797807/1‑239 (MQ=255)

                                                       gCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATCGAAGACAC‑GGTAC‑TTTTTTCCCGTCCGGGCTTCTGGCGC‑GGCaaaaa                                                                                                                                                                                         >  1:397620/1‑239 (MQ=255)

                                                             aGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTTATATCGATGACAC‑GGTTC‑TTTTTTCCATGCCGGGGTTCCTGCGC‑GGAAAAAAAACCtt                                                                                                                                                                                   >  2:194832/1‑239 (MQ=255)

                                                                gCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCGCCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTtc                                                                                                                                                                                  <  1:932723/237‑1 (MQ=255)

                                                                 ccGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTtctc                                                                                                                                                                                >  1:940834/1‑238 (MQ=255)

                                                                 ccGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTtctc                                                                                                                                                                                >  1:387530/1‑238 (MQ=255)

                                                                 ccGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATCGATGACAC‑GGTAC‑TTTTTTCCCGTCCGGGCTTCTTGCGC‑GGCAAAAAAACCTtctc                                                                                                                                                                                >  1:1009217/1‑238 (MQ=255)

                                                                    tttGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGTTATCGATGAAAC‑GGGACGTTTTTCCCAGCCCGGGGTTCTGGGGC‑GGCAAAAAAACCTCCTGGca                                                                                                                                                                             >  2:15503/1‑238 (MQ=255)

                                                                     ttGCGTATTGTTCGCTCTAAACAGTTCCGCGGTTGCCCTGGCCTCATCTCCTTCCCCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAg                                                                                                                                                                           <  1:437971/239‑1 (MQ=255)

                                                                      tGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCCGGCTTCTGGCGC‑GGCAAAAAAAACTTCTCGCCAGa                                                                                                                                                                          >  1:535853/1‑239 (MQ=255)

                                                                      tGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGGAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGa                                                                                                                                                                          >  1:576462/1‑239 (MQ=255)

                                                                      tGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATCGATGACAC‑GGTAC‑TTTTTTTCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTTTCGCCCGa                                                                                                                                                                          >  1:1495278/1‑239 (MQ=255)

                                                                           aTTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑g                                                                                                                                                                    <  2:1374989/239‑1 (MQ=255)

                                                                            ttGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTTGGGTTTGATATCGATGACAC‑GGTTC‑TTTTTTCCCATCCGCGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCCGAAAGC‑Ga                                                                                                                                                                   >  1:239495/1‑239 (MQ=255)

                                                                            ttGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCCGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑Ga                                                                                                                                                                   >  1:897180/1‑239 (MQ=255)

                                                                              gTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAg                                                                                                                                                                 >  1:1876633/1‑239 (MQ=255)

                                                                                 cGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGAtt                                                                                                                                                              >  1:199123/1‑239 (MQ=255)

                                                                                      tAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTTGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTTCATTCCGGGGTTCTCGCGCGGGCAAAAAAACCTT‑TCGCCCGAAAGC‑GAACATTTTCTg                                                                                                                                                         >  2:83569/1‑239 (MQ=255)

                                                                                       aaaCAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGaca                                                                                                                                                                                                                                    <  1:33366/167‑1 (MQ=255)

                                                                                       aaaCAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATAACGATGaca                                                                                                                                                                                                                                    >  2:33366/1‑167 (MQ=255)

                                                                                              tCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAACTTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGCGGGGGTTGTTATCCACGGCAC‑GGGAC‑TTTTTTTCTGTCCCGGCTTCCGGCGG‑GGGAAAAAAACCCTCTCCGCCGAAACG‑CAAAATTAATTGaaaaag                                                                                                                                                   >  2:80242/1‑236 (MQ=255)

                                                                                              tCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑g                                                                                                                                                                    >  1:1717489/1‑220 (MQ=255)

                                                                                              tCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑g                                                                                                                                                                    <  2:1717489/220‑1 (MQ=255)

                                                                                              tCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATc                                                                                                                                                  <  2:742684/238‑1 (MQ=255)

                                                                                               ccGCTTTTGCCCTTGCCTCAGCCCCTTCACCGCTTAACCCTGGGACTAACGTTGCCCGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCCCAAATTGAAAATAGCCTCGCAGGTCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCt                                                                                                                                                <  2:1860808/239‑1 (MQ=255)

                                                                                               ccGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCt                                                                                                                                                <  1:1119405/239‑1 (MQ=255)

                                                                                                  cTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGGGGGGTTTGATATCGATGAGAC‑GGTAA‑TTTTTTCCAATCCGGGGTTCTTGCGG‑GGCAAAAAAACCTTCTTCCCAGAAAAC‑GAAGATTATCTTAAAAATCCtgtg                                                                                                                                             >  2:586681/1‑239 (MQ=255)

                                                                                                     ttGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTgtgt                                                                                                                                            >  1:19368/1‑237 (MQ=255)

                                                                                                     ttGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGCGGGGTTTGCTTTCGCTCACAC‑GGTAC‑TTTTTTCCCGTCCCGGCCTCTTGCGC‑GGCCAACAAAACTTCTCGGCCGAAAGC‑GAAGAATATCTGAAAAATCCtgtgg                                                                                                                                            >  2:406654/1‑236 (MQ=255)

                                                                                                               ctgaTCTCCTTCACCGCTTAACCCGGGGACTAACGTTGCCGGGCTTGCTAAACAGGCCCCCATTCATTGGTTTTCGGTCGCACAAATTGAAAATGGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGaaaaaa                                                                                                                                <  2:604520/236‑1 (MQ=255)

                                                                                                                  aTCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGGTGGTAACGAAGACAC‑GGGAC‑TTTTTTTCATTTCCCGCCTCTTGCGC‑GGCCAAAAAAACCTCTCGCCCGAAAGCGGCAGATAACCT‑CAAAATCCCTTGATCTTGGAAAAAATGa                                                                                                                             >  2:1108059/1‑239 (MQ=255)

                                                                                                                      ccTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACaa                                                                                                                         <  1:1654690/239‑1 (MQ=255)

                                                                                                                         tCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATgg                                                                                                                      <  1:1797807/239‑1 (MQ=255)

                                                                                                                              gCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTggg                                                                                                                 <  2:1762971/239‑1 (MQ=255)

                                                                                                                              gCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTTTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGGGTTCTGGGAAAAAATGAACAATGGCTggg                                                                                                                 >  1:164612/1‑239 (MQ=255)

                                                                                                                               cTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGGGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTgggg                                                                                                                >  1:1150203/1‑238 (MQ=255)

                                                                                                                               cTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGa                                                                                                                >  1:1020247/1‑239 (MQ=255)

                                                                                                                                        gggACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAg                                                                                                       <  1:897166/239‑1 (MQ=255)

                                                                                                                                        gggACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATAGATGACAC‑GGGAC‑TTTTTTCCAGGCCGGGCCTCTGGCGC‑GGCCAAAAAAACTTCTCCCCAGAAAGC‑GAAAATTATTTGAAAAATCCTGGGGTCTTGGGAAAAAAGAAAAAAGGACGGGAGGAAATCaa                                                                                                       >  2:1429980/1‑238 (MQ=255)

                                                                                                                                         ggACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCaac                                                                                                      >  1:1592351/1‑237 (MQ=255)

                                                                                                                                         ggACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAAATCAGc                                                                                                      >  2:518413/1‑239 (MQ=255)

                                                                                                                                         ggACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAAACTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAAAAATGGCTGGGAAGAATTCAGc                                                                                                      >  1:1048390/1‑239 (MQ=255)

                                                                                                                                           attAACGTGGCAAGGCTTGCGGAACAGCCACCCATTCATTGGGTTTGGGTGTGAAAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAATAATGGCTGGGATGAATTCAGCa                                                                                                     <  2:487598/236‑1 (MQ=255)

                                                                                                                                            cTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCAtt                                                                                                   <  2:19368/239‑1 (MQ=255)

                                                                                                                                               aCGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATAACTATGAAAC‑GGTAA‑TTTTTTCCAGTTCCGGCTTCTCGCGC‑GGCAAAAAAACCCTCCCCCCATAAAGG‑CAAGATTACACGCAAAATGCGGTGTTATGGGAAAAAATGAACAACGGGTGGGGGTAATTCAAAATTccc                                                                                                >  2:868963/1‑238 (MQ=255)

                                                                                                                                               aCGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGCGGGGGTTGATATTGATGACAC‑TGGAA‑TTTTTTTCCGTCCGGGGTTCTGGCGC‑GGCAAAAAAAACTTATCCCCAGAAAAC‑GAAAATTATTATAAAAAACCTGGGTTTTGGGCAAAAATGAAAAAAGGATGGGGAGAATTCAACaattcc                                                                                                >  2:929214/1‑234 (MQ=255)

                                                                                                                                                    gCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGA‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGGTGAATTTAGCATTACAAAaga                                                                                           >  1:402331/1‑239 (MQ=255)

                                                                                                                                                    gCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCCACTACAC‑CGTGC‑TTTTTTCCCATCCGGGGGTTTGGCCC‑GGGAAAAAAAACTTCTCGGCCGAAAGC‑GGAGAATATTTGAAAAATTCCTTTTTCTGGGAAAAAAAGAACAATGGCGGGGAGGAAATCCGAACTTCaaaaaa                                                                                           >  2:871808/1‑237 (MQ=255)

                                                                                                                                                          cTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATAGATGACAC‑GGTAC‑CTTTTTCCAGTCCGGGCTTCTGGCCC‑GGCAAAAAAACCTTCTCGCCCGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAAAGGCTGGGATAAATTTAGCATTCCAAAAAAGGtc                                                                                       >  1:1511536/1‑237 (MQ=255)

                                                                                                                                                           ttGCTGAACAGGCCCCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATGGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGtcgct                                                                                    <  2:1396538/239‑1 (MQ=255)

                                                                                                                                                             gCTGAACAGGCCCCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGtcgctcg                                                                                  <  1:925892/239‑1 (MQ=255)

                                                                                                                                                             gCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCCGACCGGGCTTCTGGCGC‑GGCAAAAAAACCCTCTCGCCAGAAAGC‑GAAGATTATCTGTAAAACACTGTGTTCTGGGAAAAAATGAACAAATGATGGGGGTAATTCAGAATTCCACAagagtgcggta                                                                                   >  2:135454/1‑231 (MQ=255)

                                                                                                                                                               tGACCAGGCACCCATTCATTGGGTTTCGGGCGCACAAATTGAAAATGGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAGAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGtcgctcgc                                                                                 <  2:1275661/238‑1 (MQ=255)

                                                                                                                                                               tGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGcc                                                                                <  2:815900/239‑1 (MQ=255)

                                                                                                                                                                       ccccaattcattGGGTTCCGGTCGCAAAAATTGAAATAGGCCTCGAGGGGCT‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCtgat                                                                         <  2:170120/233‑1 (MQ=255)

                                                                                                                                                                       cACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCtga                                                                          <  1:1371749/237‑1 (MQ=255)

                                                                                                                                                                          ccATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAaga                                                                                           <  1:1141800/217‑1 (MQ=255)

                                                                                                                                                                           cattcattGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGata                                                                    <  1:1179822/239‑1 (MQ=255)

                                                                                                                                                                           cattcattGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGata                                                                    >  1:510586/1‑239 (MQ=255)

                                                                                                                                                                             ttcattGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCTATTACAC‑GGGAC‑TTTTTTCCCGTCCGGGCTTCTGGCGC‑GGGAAAAAAAACCTCTCGCCCGAAAGC‑GAAGATTATCTGAAAAAACCTGTGTTTTTGGGAAAAATGAAAAATGGCTGGGGTGAAATAATCATTACAAAAAAGGTGACTCCCCCGCtgacttat                                                                     >  2:791568/1‑231 (MQ=255)

                                                                                                                                                                              tctttGGTTTTCGGGCGCACAAATTGAAAAGCGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGc                                                                 <  2:1495278/236‑1 (MQ=255)

                                                                                                                                                                              tcattGGGGTGCGGTCGCACAAATTGAAAAAAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGc                                                                 <  2:576462/239‑1 (MQ=255)

                                                                                                                                                                                    ggTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTAc                                                           >  1:1851353/1‑239 (MQ=255)

                                                                                                                                                                                    ggTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TACGCCAATGGCGGTGGGGGTTGAGATAGTAGACAC‑GGCAC‑TTTTTTCCAGTCCGGGCTTCCGGCGC‑GGCCAAAAAACCTTCTCGCCAGAAAGC‑GAAGAATATCTGAAAAAACCTGTGTTCTGGGAAAAAAAGAACAATGGCTGGGGGGGATTCAGCATTTCACAAGAGGtggctccc                                                                                 >  2:1141800/1‑215 (MQ=255)

                                                                                                                                                                                      tttCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGGGC‑GGCAAAAAAACCTTCTCGCCCGAAAGC‑GAAGATTATCTGAAAAAACCTGTGTTCTGGGGAAAAATGAACAATGGCTGGGGTGAATTCAGCATTTCAAAAAAGGTCGCTCCCCCACTGATTGATATGCATgatct                                                          >  2:1463790/1‑234 (MQ=255)

                                                                                                                                                                                      tttCGGTCGCACAAATTG‑AAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGGACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTAcgcc                                                        >  1:1140890/1‑239 (MQ=255)

                                                                                                                                                                                        tCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTAcgccg                                                       <  2:940834/239‑1 (MQ=255)

                                                                                                                                                                                        tCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCCGGCTTCTTGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTTGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATTGATGTAcgcc                                                        >  1:225548/1‑238 (MQ=255)

                                                                                                                                                                                        tCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATCGATGACAC‑GGTAC‑TTTTTTTCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCCGAAAGC‑GAAGATTATCTGAAAAATCCCGTGTTCTGGGAAAAAATGAACAAAGGCTGGGGTGAAATTAGCAATACAAAAGAAGACGCCCGCAACCTGATTGGTATGctagttcccc                                                        >  2:734062/1‑229 (MQ=255)

                                                                                                                                                                                          ggTCGCACAAATTGAAAATGTCCTCGCGGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCcgcg                                                     <  2:1020247/239‑1 (MQ=255)

                                                                                                                                                                                          ggTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCcgcg                                                     <  1:1712278/239‑1 (MQ=255)

                                                                                                                                                                                                    aTTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGCGGGGGTTGATAACGAAGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATTAATTCAGCATTCTCAAAAAGGGCGCCCTCCACCTGATTGAAATGCCTGTACGCCCCGGGGAcgcgga                                           >  2:175188/1‑237 (MQ=255)

                                                                                                                                                                                                     ttGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGAtc                                          <  1:194832/239‑1 (MQ=255)

                                                                                                                                                                                                     tggAAAATAGCCTCCCGGGGCT‑TCCGCCAATGGCGGTGGGGGTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGAtc                                          <  2:1894794/237‑1 (MQ=255)

                                                                                                                                                                                                               ccTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGGTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTtgtg                                 >  1:1190173/1‑238 (MQ=255)

                                                                                                                                                                                                                cccgaggggCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAATCCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTTGTGAc                               <  2:1608287/233‑1 (MQ=255)

                                                                                                                                                                                                                cTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTTGTGAc                               <  1:492189/239‑1 (MQ=255)

                                                                                                                                                                                                                 accgcgggCGTTCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTTGTGAc                               <  2:629602/234‑1 (MQ=255)

                                                                                                                                                                                                                                   aTGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGaa             <  1:604681/239‑1 (MQ=255)

                                                                                                                                                                                                                                           ggggTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGaaa     <  2:1592351/239‑1 (MQ=255)

                                                                                                                                                                                                                                               tttGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACgg  <  1:15503/238‑1 (MQ=255)

TAAAAAGTTTCAACATACTGACTATTTAGGGAAAAATATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCG‑TCCGCCAATGGCGGTGGGGTTTGATATCGATGACAC‑GGTAC‑TTTTTTCCAGTCCGGGCTTCTGGCGC‑GGCAAAAAAACCTTCTCGCCAGAAAGC‑GAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGG  >  NC_007779/4272967‑4273442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`