BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,408,585	T→G	11.2%	G202G (GGT→GGG)	hflC →	protease modulator HflC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,408,585	0	T	G	11.2%	439.5 / 3.5	172	G202G (GGT→GGG)	hflC	protease modulator HflC
Reads supporting (aligned to +/- strand): ref base T (45/97); new base G (28/2); total (73/99)
Fisher's exact test for biased strand distribution p-value = 2.06e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 175 total aligned reads displayed.

TGACCGTCTGCGTTCTGAAATTGGTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAA  >  NC_007779/4408351‑4408822

  aCCGTCTGCGTTCTGAAATTGGTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGaa                                                                                                                                                                                                                                          >  1:385937/1‑239 (MQ=255)

     gTCTGCGTTCTGAAATTGGTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGGTTGaaagt                                                                                                                                                                                                                                       >  1:780462/1‑236 (MQ=255)

         gCGTTCTGAAATTGGTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCg                                                                                                                                                                                                                                   <  2:1446500/239‑1 (MQ=255)

             tCTGAAATTGGTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGAtgt                                                                                                                                                                                                                               <  2:1616201/239‑1 (MQ=255)

             tCTGAAATTGGTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGAtgt                                                                                                                                                                                                                               <  1:1926792/239‑1 (MQ=255)

                     tGGTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCa                                                                                                                                                                                                                       <  1:1196276/239‑1 (MQ=255)

                      gtatgCCTGGACGGGAAAGATTTCGGCACCGATTCCCGTAGGCGTCTGTCCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTCCCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCaa                                                                                                                                                                                                                      <  2:1255310/235‑1 (MQ=255)

                      ggTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCACGGGTTTGGAGGTGTCGGCGTGCGTAACaa                                                                                                                                                                                                                      >  2:580568/1‑239 (MQ=255)

                       gTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCGCGGTACAGAGATTGTAGCTCTGCGTATCaa                                                                                                                                                                                                                      >  2:649829/1‑238 (MQ=255)

                         cGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCa                                                                                                                                                                                                                   <  1:543933/239‑1 (MQ=255)

                           ccTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGAGTGTAGGTGTCGTTGTGTGGATCaaaaaa                                                                                                                                                                                                                  >  2:841744/1‑234 (MQ=255)

                                    gAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGc                                                                                                                                                                                                        <  1:155991/239‑1 (MQ=255)

                                    gAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTGTCGATGTGCGTATCAAGCAGCTCAACCTg                                                                                                                                                                                                         >  1:301803/1‑238 (MQ=255)

                                    gAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTg                                                                                                                                                                                                         >  1:190392/1‑238 (MQ=255)

                                     aaaGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGAtgt                                                                                                                                                                                                                               <  1:1338823/215‑1 (MQ=255)

                                           atCGTCACGGATTCCCGGGGTCGTCTGACCCTCGAAGTACGTGACGCGCGGACCTCCGGTGCTGCGGGTACATAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGccgaccga                                                                                                                                                                                                 <  2:177707/239‑1 (MQ=255)

                                            tCGTCACCGGTTCCCGTGGTCGTCTGTCGCTAGAAGGACATGACGCGCTGAACTCCGGTACTGCGGGTACAGAAGATGAAGTTCCTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGccgaccgca                                                                                                                                                                                                <  2:706056/239‑3 (MQ=255)

                                                   cttttCCCGTGTCCGCATGGCCCACGGAGTACGTGACGCGCTGAACACCTGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCCTTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTg                                                                                                                                                                                        <  2:200283/236‑1 (MQ=255)

                                                      ttCCCGTTGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTTCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     <  2:384139/239‑1 (MQ=255)

                                                      ttCCCGTGGTCGTGTGACCTTCGTAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACGGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     <  2:1421940/239‑1 (MQ=255)

                                                      ttCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGGCCTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGTCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     <  2:1351614/239‑1 (MQ=255)

                                                      ttCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     <  1:1788557/239‑1 (MQ=255)

                                                      ttCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     <  1:106398/239‑1 (MQ=255)

                                                      ttCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     <  1:1419998/239‑1 (MQ=255)

                                                      ttCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     <  2:629069/239‑1 (MQ=255)

                                                      tctccGTGGTCGTCTGAACCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGTTACAGAAGAGGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     <  2:1721575/236‑1 (MQ=255)

                                                       tCCCGTGGTCGTCTGACCCTCGAAGTACGTGACTCACTTAACGCCGATTAGGCGGGTACAGAAGATGAAGTTACTACCCCGGCCGCAGATAACGCCATTGCCGATGCGGCAGAGCGCGTAACTGCTGTGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAGCCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     <  2:1323583/238‑1 (MQ=255)

                                                        cccGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCg                                                                                                                                                                                   <  2:1561618/239‑1 (MQ=255)

                                                        cccGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCg                                                                                                                                                                                   <  1:578834/239‑1 (MQ=255)

                                                          cGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGAt                                                                                                                                                                                 <  1:129663/239‑1 (MQ=255)

                                                                cgtcTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     >  1:329960/1‑229 (MQ=255)

                                                                cgtcTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAg                                                                                                                                                                                     <  2:329960/229‑1 (MQ=255)

                                                                  tcTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGGCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAAcc                                                                                                                                                                         >  1:980055/1‑239 (MQ=255)

                                                                    tGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGGTGTCGATGTGGGGATCAAGCAGATCAACCTGCCGACCGAA‑GGGTCTGAAGCGCTCTTCAACCGt                                                                                                                                                                       >  1:483290/1‑239 (MQ=255)

                                                                      aCCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAAACGTAt                                                                                                                                                                     >  1:1809810/1‑239 (MQ=255)

                                                                           cGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTGTTGGTGTGCGGATCAAGCAGATCAACCTGCCGACCGGA‑GGGGTCGAAGCGATTCCAAACCGTATgcgc                                                                                                                                                                 >  2:1844157/1‑238 (MQ=255)

                                                                             aaGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCg                                                                                                                                                                                                                            <  1:1466584/178‑1 (MQ=255)

                                                                             aaGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGcc                                                                                                                                                              >  1:827757/1‑239 (MQ=255)

                                                                                 aCGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGa                                                                                                                                                            <  1:1743053/237‑1 (MQ=255)

                                                                                            tGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGGATCAAGCAGATCAACCTGCCGACCGAA‑GTGGCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTa                                                                                                                                               >  1:316224/1‑239 (MQ=255)

                                                                                             gAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAg                                                                                                                                              <  2:190392/239‑1 (MQ=255)

                                                                                              aaCTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAgc                                                                                                                                             >  1:1615081/1‑239 (MQ=255)

                                                                                                    ggTTCTGCGGGTTCAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATGGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGCTCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGcgtcg                                                                                                                                       <  2:1436674/239‑1 (MQ=255)

                                                                                                             ggTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTGTCGATGTGCGTATCAATCAAATCAACCCGCCGGCCGGA‑AGGTCTTAAGCGATCTACAACAGGAAGCCCCCCCAGGGGGCAGGGGGAGGGCGTCGGCACAGtc                                                                                                                               >  2:700435/1‑237 (MQ=255)

                                                                                                               tACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTca                                                                                                                             <  1:1007064/238‑1 (MQ=255)

                                                                                                                aCAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTcaca                                                                                                                           <  1:906539/239‑1 (MQ=255)

                                                                                                                aCAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTcaca                                                                                                                           <  1:702604/239‑1 (MQ=255)

                                                                                                                aCAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTcaca                                                                                                                           <  1:505760/239‑1 (MQ=255)

                                                                                                                aCAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTcac                                                                                                                            <  1:649829/238‑1 (MQ=255)

                                                                                                                              tactacCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCGTGGGAATGTAGGTGTCGATGTGCGTAAAAATAAGATCCAACTGCCGACCGAAGGTGT‑TGAAGCGATCTACAAACCTATGCGCCGCGCGCGTGAAGCGGTGGCGGGTCGGCACCGGTCCCAACGTACGGcagaag                                                                                                             >  2:807836/1‑239 (MQ=255)

                                                                                                                                ctacCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCg                                                                                                           >  1:854222/1‑239 (MQ=255)

                                                                                                                                ctacCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTTTCGATGTGCGGAACAAACAGATCAACCCGCCGCACGAA‑GTGTTTGAAGCGGTCTACAAACCTAAGGCCGCCGAGGGGGGAGGGGGAGGGGGGCGCCACCGTTCACAAGGGCCGGAAGAAACg                                                                                                           >  2:943080/1‑239 (MQ=255)

                                                                                                                                    cccGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGaaa                                                                                                       >  1:1582308/1‑239 (MQ=255)

                                                                                                                                     ccGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGaaaa                                                                                                      >  1:1518039/1‑239 (MQ=255)

                                                                                                                                       ggcggcAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTGTTGAAGTTGTTGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GGGTCTGAAGCGGTCTACAACCGCATGCGCGCCGAGCGCGAAGCGGGAGCGCGCCGCTCCCGTTCACAAGGTCAGGCAGAAGCGGAAAAAc                                                                                                    >  2:1942354/1‑239 (MQ=255)

                                                                                                                                       ggcggcAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTAc                                                                                                                                                                             >  1:149473/1‑166 (MQ=255)

                                                                                                                                       ggcggcAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGCGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGaaaa                                                                                                      >  1:593018/1‑237 (MQ=255)

                                                                                                                                       ggcggcAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGGGAAGCGGGAGCGCCGCGTCACCGTTCACAAGGTCAGGAAGAAGCGGaaaaaa                                                                                                    >  2:1210626/1‑238 (MQ=255)

                                                                                                                                       ggcggcAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTGTCGATGTGCGGATCCAGCAGATCAACCTGCCGACCGAA‑GGGTCTGAAGCGATCTACAACCGTAAGCGCGCCGAGCGTGGAGAGGTAGCGCGGCGCCACCGTTCACAAGGGCCGGAAGAAGCGGAAAAAc                                                                                                    >  2:909352/1‑239 (MQ=255)

                                                                                                                                           gcAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAAGTGGCGGTGGGCGTATCAAACAGGACAAACCTCCGACCGGA‑GTGTCTGAAGCCGTCTACAACCGTATGCGCCCCGAGCCGGAAGCGGGAGCGCGGCCTCCCCGCTCACCAGGCCAGGAACAAGCGGgaaaaaagcc                                                                                                >  2:1062141/1‑234 (MQ=255)

                                                                                                                                                tAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTgcgcg                                                                                              <  2:736613/236‑1 (MQ=255)

                                                                                                                                                tAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGa                                                                                           <  1:928785/239‑1 (MQ=255)

                                                                                                                                                    gCCATTGCCGAAGCTGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGAGGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTAACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCTCGACTGc                                                                                       <  2:783489/239‑1 (MQ=255)

                                                                                                                                                    gCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGc                                                                                       <  2:41144/239‑1 (MQ=255)

                                                                                                                                                    gCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGc                                                                                       <  2:1225292/239‑1 (MQ=255)

                                                                                                                                                    gCCATTGACGAAGCGGCTGAGCGCGTGACGGCTGAGACGAATGGCAAAGTTCCTGTCATCAACCCGAACAGTATGTCTGAGCTGGGTATTGAATTTGTCGGTGTGCGTATCACGCAGATCCACCTGCCGACCGAA‑GTGTCTGAAGCTATCTACAACCGTATGCGCGCCGAGCGCGAAGCGGTAGCGCGTCGTCACCGTTCACAAGTTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGc                                                                                       <  2:1300081/239‑1 (MQ=255)

                                                                                                                                                        ttGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTca                                                                                                                             >  1:1227502/1‑197 (MQ=255)

                                                                                                                                                        ttGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTGTCGATGGGCGTATCAAACAGATCAACCCGCCGACCGAA‑GGGGCTGAAGCGATCTACAACCGTATGCCCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGGTCACAAGGGCAGGAAGAAGAGGAAAAAATGCGCGCGGCTGCCGa                                                                                    >  2:1504742/1‑238 (MQ=255)

                                                                                                                                                         tGCCGAAGCGGCAGAGCGCGCAACGGCTGAGACGAAGGGCAAAGTTCCGGTCCTCAACCTGAACAGTATGGCGGCGCTTGGTATTGTAGCTGTCGAGGAACGGGTCAAGCAGAAGAACCTGCCGACCCGA‑GTGAACGAAACGAACCACAACCCAAACGACGCCGCGCGCGATACGGGACCGCGTGGTCAACCGTCCCAAGGCCAGGAAGGCGCGGAACAACGCCGCGCGACCGCCGat                                                                                   >  2:235601/1‑237 (MQ=255)

                                                                                                                                                                     agagCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGAcc                                                                       <  2:928723/238‑1 (MQ=255)

                                                                                                                                                                          gcgTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACg                                                                 <  1:1677239/239‑1 (MQ=255)

                                                                                                                                                                          gcgTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACg                                                                 <  1:741498/239‑1 (MQ=255)

                                                                                                                                                                              aaCGGCTGAGACGAAGGGCAAAGTGCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATTTGCGTATCAAGCAGATGAACCTGCCGACCGAA‑GTGTCTGAAGCGATCGACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGGGACCAGAACGCTgg                                                             <  2:554295/239‑1 (MQ=255)

                                                                                                                                                                                 ggCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAg                                                          <  1:1614331/239‑1 (MQ=255)

                                                                                                                                                                                 ggCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGGATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCCCCCTTCCCAAGGGCAGGAAGAAGCGGGAAAACTGCGCGCGACTGCCGACTCTGAAGAGGCCAGAAAGCTGGCac                                                          >  2:794335/1‑238 (MQ=255)

                                                                                                                                                                                      agaCGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCCCCGGGGATTGAAGTTGTCGATTTGCGGATCAAACAGATCAACCCGCCGCCCGCA‑GTGTCTGAAGCGATCTACAACCGTATGCCCCCCGAGCGGGCAGCGGGAGCGCGTCGTCACCATTCACACGGGCCGGACAGAGCGGCAACACTGCGCGCCCCTCCCCCCTTTGAAGTGACCAGAACGCTGGCACAAgac                                                     >  2:1094716/1‑237 (MQ=255)

                                                                                                                                                                                            aGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGt                                               <  1:1234205/239‑1 (MQ=255)

                                                                                                                                                                                            aGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGt                                               <  1:1446520/239‑1 (MQ=255)

                                                                                                                                                                                            aGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGAGGTGCGTAGCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGt                                               <  2:1777135/239‑1 (MQ=255)

                                                                                                                                                                                            aGGGCAAAGTTACGGTCATCAACCCGAACAGTCTGGCGTCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAGCCTGCCGACCGAA‑GTGTCTGATGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAACAAGCGGAAAAACTGCGCGCGACTGCCGACAATGAAGTGACCAGAACGCTGGAAGAAGCTGAGCGt                                               <  2:303670/239‑1 (MQ=255)

                                                                                                                                                                                               gCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCa                                             <  1:580568/238‑1 (MQ=255)

                                                                                                                                                                                                 aaaGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCCGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGCCACCGTTCACACGGACAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTAAGAAGAGAACAGAACGCTGGCAGAAGCCGAGCGGCAgg                                           >  2:1535712/1‑238 (MQ=255)

                                                                                                                                                                                                  aaGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGc                                         <  1:1210626/239‑1 (MQ=255)

                                                                                                                                                                                                   aGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGcc                                        <  1:143541/239‑1 (MQ=255)

                                                                                                                                                                                                      tCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTAGTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGca                                     <  2:888178/239‑1 (MQ=255)

                                                                                                                                                                                                               caACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGc                                                                                       >  1:716322/1‑180 (MQ=255)

                                                                                                                                                                                                                 aCCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCgtggt                          <  2:157971/239‑1 (MQ=255)

                                                                                                                                                                                                                                cggcgCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCg                              <  2:397922/220‑1 (MQ=255)

                                                                                                                                                                                                                                cggcgCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCg                              >  1:397922/1‑220 (MQ=255)

                                                                                                                                                                                                                                cggcgCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGaa           >  1:914055/1‑239 (MQ=255)

                                                                                                                                                                                                                                cggcgCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGaa           >  1:1084352/1‑239 (MQ=255)

                                                                                                                                                                                                                                   cgcTGGGTATTGAAGTTGTCGATGTGCGTATCAGGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAagca        >  1:1162918/1‑239 (MQ=255)

                                                                                                                                                                                                                                   cgcTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCt                                                                                                                                                                                                          <  2:857604/46‑1 (MQ=255)

                                                                                                                                                                                                                                   cgcTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCt                                                                                                                                                                                                          >  1:857604/1‑46 (MQ=255)

                                                                                                                                                                                                                                   cgcTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAagca        >  1:1288560/1‑239 (MQ=255)

                                                                                                                                                                                                                                   cgcTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAagca        >  1:1519238/1‑239 (MQ=255)

                                                                                                                                                                                                                                   cgcTCGGTGTTGAACCTGTCGCTGTGCGTATCAAGCAGATGAAACTGCCGCCCGGA‑GGGTCCGAAGCGCTCTACAATCGCAATCTAGCCGGGAGTGACGCGGTCGCGCGTAGTCACCGGTCACAACGGCCGGAAAAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGGGACCAGAACGCGGCCAGAAGATGAGCGTCAGGGCCGCACTATGCGTGGTGAAGGCGATACCGCagcc        >  2:1434470/1‑238 (MQ=255)

                                                                                                                                                                                                                                     cTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAagcag       >  1:1947864/1‑238 (MQ=255)

                                                                                                                                                                                                                                     cTGGGGATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAagcag       >  1:231945/1‑238 (MQ=255)

                                                                                                                                                                                                                                          tATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCaaa  <  1:1844157/238‑1 (MQ=255)

TGACCGTCTGCGTTCTGAAATTGGTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAA‑GTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAA  >  NC_007779/4408351‑4408822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`