| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 4,573,245 | T→A | 7.6% | intergenic (‑46/‑433) | mdtM ← / → Y75_RS25100 | multidrug efflux MFS transporter MdtM/Rpn family recombination‑promoting nuclease/putative transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 4,573,245 | 0 | T | A | 7.6% | 687.8 / 6.0 | 214 | intergenic (‑46/‑433) | mdtM/Y75_RS25100 | multidrug efflux MFS transporter MdtM/Rpn family recombination‑promoting nuclease/putative transposase |
| Reads supporting (aligned to +/- strand): ref base T (29/163); new base A (16/3); total (46/168) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.66e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 217 total aligned reads displayed.
TAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAA > NC_007779/4573008‑4573482 | tAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGAGGCATAAAAAACAACACCCTTTCCCGAGAA‑CCCCCAC‑CGGGAAAAAGAAAtt > 1:1100324/1‑239 (MQ=255)tAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGTAAAAAAAGTGGCAAAACAAACAACCACCTTTCCGGGGAA‑CCCCCAC‑GGGGAGAAAGAAAt > 1:588517/1‑238 (MQ=255)tAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAAGGGCTAAAAAAAAAAACCCTTTCCCGAGAA‑CCCCCACGGGGGAAAACAAAAt > 1:1027877/1‑239 (MQ=255) gCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAAt < 1:635344/239‑1 (MQ=255) aTACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATAcc < 2:40076/239‑1 (MQ=255) aCCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGt < 1:430753/239‑1 (MQ=255) cAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAAGGCATAACAAAAAACTCCTTTTTCGGGGAA‑ACCCCAC‑GGGGGAAACGAAATTCAAAAACGT‑CGGTa > 2:885151/1‑239 (MQ=255) gCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAAGGGATAAAAAAAAAAACCCTGTCCGGGGAA‑CCCCAAC‑AGGGGAAAAGAAATTCAAAAACGT‑CGGGaaa > 1:731152/1‑238 (MQ=255) aaGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTCCCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATCCCGT‑CGGTaa < 1:392241/236‑1 (MQ=255) ggCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTgag < 1:1482417/239‑1 (MQ=255) cagcagGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTgag‑a < 1:318976/238‑1 (MQ=255) agcagGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAATGGCGTAAAAAACAAATCCTTTTCCGGGGAA‑ACCCAAC‑GGGGGAAAAGAAAATCAATACCCC‑CGGGAATGACGAAAAGCA‑GGGGAG‑AAg > 1:957460/1‑239 (MQ=255) aCTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAATGGCATAACAAAAAAACCCCTGTCCGGAGAA‑CCCCAAC‑GGGGGAAACGAAATTCAATAACCT‑CGGGGATGACGAAAAGAA‑GGGGGG‑AAGGGGAAAGAGAcg > 1:259711/1‑238 (MQ=255) cTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGAc < 1:765385/237‑1 (MQ=255) cTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGAc < 1:1938657/237‑1 (MQ=255) cTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGAc < 2:1035275/237‑1 (MQ=255) cTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTg < 1:1122474/239‑1 (MQ=255) gCATTAAAATCACGTACCACATTAATGATCCCAGGTTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGAAAAAAAAACGGGGATAACAAAAAACACCCCTTCCGGGGAACCCCCCAA‑GGGGAAAA‑GAAAATCAAAACCCT‑CGGTAATGACGAAAAGGA‑GGGGGGAAAGGGAAACAAGAccgacaaggaa > 2:351317/1‑229 (MQ=255) cATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTAc < 2:1023786/238‑1 (MQ=255) aaTTAAAATCACGGTCCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAAGCAACGCCATCGGGACAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAACCAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATGCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAAAGAGACTGCAACTGCAc < 2:1689919/237‑1 (MQ=255) aTTAAAATCACGTACCGCATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACt < 2:1112509/238‑1 (MQ=255) aaaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCaa < 1:1242894/227‑1 (MQ=255) aaaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAAtt < 2:666642/239‑1 (MQ=255) aCGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATg < 1:1624537/239‑1 (MQ=255) gTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa < 1:240289/239‑1 (MQ=255) agaCCACATGAATGATCCCAGTCAGGATCATATCCGTCGACAGATACGCAGCAATGTCATACTAAAGCAACTCCAGCGAGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGTGCAACGAGACTGCAAATTTACTGAATTTCATGTa < 2:12350/237‑1 (MQ=255) aCCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAAt < 1:1797679/239‑1 (MQ=255) cacaTTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCATCGAGACTGCAAATGTACTGAATTTCATGTAATCa < 1:891999/239‑1 (MQ=255) cacaTTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCa < 1:1458964/239‑1 (MQ=255) acaTTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCaa < 1:1598019/239‑1 (MQ=255) caTTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAAc < 1:1586950/239‑1 (MQ=255) ttAATGATCCCAGGCTGGATCAGATCCGTAGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGGCCGGAGAA‑CCCGAAC‑GGGGAAAACGAAATGCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAAGGTACTGAATTTCATGTAATCAACca < 2:1835097/239‑1 (MQ=255) aaTGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACcaca < 1:1828075/239‑1 (MQ=255) aaTGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACcaca < 1:386164/239‑1 (MQ=255) aTGAACCCAGGCTGGATCAGATCCGTCGACAGATACACAGAAAAGTCATACAAAATCAACGCCACCGGGAAAAACAGCGGTGCGGCATGGCGGGTAAAAACACGATGCATAACAAACAACTCCGTGTCCGGAGAA‑CCCCAAA‑GGGGAAAACGAAATTCAAAAGCGT‑CTGTAATGACAAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCATATGTACTGAATTTCAGGTAATCAACcaacc < 2:1732404/239‑4 (MQ=255) aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGGTAACAAAAAACTCCTTGTCCGGAGAA‑CCCCCAC‑GGGGAAAAAGAAAATCAATAACGT‑CGGGAATGACGAAAAGCA‑GGGGAG‑AAGGGGAACGAGACTGCAAATGGACTGAAATTTATGTAATCAACCaaacag > 1:327867/1‑236 (MQ=255) aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAAACCCTTGTCCGGAGAA‑ACCCCAC‑GGGGGAAAAGAAAATCAAAACCCT‑CGGGAATGACGAAAAGAA‑GGGGAG‑AAGGGGAAAGAGAATGCATATGTACTGAATTTCATGTAATCAACCacaccg > 1:980645/1‑236 (MQ=255) tCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGcc < 1:85264/239‑1 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAACAACTCCCTGTCCGGAGAA‑CCCCCAC‑GGGGGAAACGAAAATCAATACCGT‑CGGGAATGACGAAAAGCA‑GGGGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAAACACACTg > 1:545917/1‑235 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGCATAACAAACAAATCCTTTTCCGGAGAA‑CCCCCAC‑GGGGAAAAAGAAATTCAATACCGT‑CGGGAATGACGAAAGGCA‑GGGGGG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTTATGTAATCAACCACACTGCCtg > 1:1079741/1‑239 (MQ=255) cTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCtgtg < 1:362407/236‑1 (MQ=255) cTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCtgtg < 1:204603/236‑1 (MQ=255) cTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGAGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCtgtg < 1:498066/236‑1 (MQ=255) aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAacaca < 1:919435/238‑1 (MQ=255) aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAacaca < 1:845604/238‑1 (MQ=255) aGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACacaga < 2:1852693/239‑1 (MQ=255) aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAAAAAAAAACTCCCTGTCCGGGGAA‑ACCCAAC‑GGGGGAAAAGAAAATCAATACCGC‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCCAATGTACTGAATTTCATGTAATCAACCCCACTGCCCGTGAACACacagaca > 1:1002851/1‑239 (MQ=255) tcagTCGACAGATACGCAGCAAAGTCATACAAAATCAACTCCATCGGGAAAAACAGCGTGGCGGCAGGGCGCGTAAAAAAACGTTGCATAACAGACAAGTCCTGGTCCGGAGAA‑CCCCAAC‑GGGGAATAAGAAATTCAATACGAT‑CGCTAATGACGAAAGGCA‑TGTGAG‑AACGGCAACGAGAGCGCAAATGTACTGAATTTCATGGAAACAGCCGCACGGCGTGTGATCTCtcaga < 2:603058/233‑1 (MQ=255) tCCGTCGACAGATACGCAGCAAAGTCATACAAAAACAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACacaggca < 2:504731/238‑1 (MQ=255) gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAAAAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGGAAAAGAAATTCAATACCGT‑CGGGAATGACGAAAGGCA‑GGGGAG‑AAGGGCAAAGAGAAAGCAAATGTACTGAATTTTATGTAATCAACCACACTGCCTGTGAAAACACAGACAaaga > 1:1036448/1‑239 (MQ=255) gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAGGGGATAACAAAAAACCCCCCTTCCCGAGAA‑CCCCCAC‑CGGGAAAACGAAAATCAAAACCCTCCGGAAATGA‑GAAAAGCA‑GGCGAG‑GAAGGCAACGAGACCGCAAAAGTACCGAATTTCATATAAACAAACACAAAGACTGTGAACGCACAAACAcaga > 2:1170955/1‑239 (MQ=255) gcaaggtACGCAACAAAGTAATAATAAAGCAACGACGTCCGGAAAAACAGCGTCGCCGAACGGCGGGCAAAAAAAAATGACAGCACATACAAGACATTGACGGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATGCCGC‑CGGTAATGACAAAAGGCA‑GAGGAG‑AAGAACAACGAGACGGCAAAGGTACTGAATCTCATGTAAACAACCACACCGACTGTGAACAGGCAGACAGAGaaa < 2:959486/232‑1 (MQ=255) aaaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACtt < 1:601576/237‑1 (MQ=255) aGTCATACAAAAGCAACGCCTTCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACTAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACGCACAGACAGAGAAATACTTTCTGACGTCgtg < 2:1866056/239‑3 (MQ=255) cATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTc < 1:1278975/238‑1 (MQ=255) cATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCa < 2:595175/239‑1 (MQ=255) cATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGAGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTGTCTGACTTCGGGTc < 2:747349/238‑1 (MQ=255) cATACAAAAGCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGAGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCa < 2:1501443/239‑1 (MQ=255) aacaCAAAATCAACGCCAGCGTGGAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCAGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCTCACTGCCTGTGAACACACAGACAGAGAAATGCTTGCTGACTTCGGGTCa < 2:245473/236‑1 (MQ=255) aTACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAg < 1:83135/239‑1 (MQ=255) aTACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAg < 2:293267/239‑1 (MQ=255) tACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGa < 1:1522171/239‑1 (MQ=255) tACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGa < 1:1675001/239‑1 (MQ=255) tACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGa < 1:1891338/239‑1 (MQ=255) tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGtata < 1:1393739/239‑1 (MQ=255) tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAAAGGCGTAAAAAAAAACACCCTGTCCGGAGAA‑CCCCCAC‑AGGGGAAAAGAAAATCAAAAACCC‑CGGTAATGAAGAAAAGCAGGGGGGG‑AAGGACACAAAAACACCAAAGGAAAT‑AATTTTATGTAATTAACCAACCTGCCTGTGGACACAAACACAAAAAAAAAAATTTTTGCTTCCGGTCACAAAGtaaa > 2:531679/1‑237 (MQ=255) aaCGCCATCGGGAAAAACAGCGTTGCGGCATGGCGGGTAAAAAAACGTTGCATAACAAGCAACTCCTTGTCCGGAGAA‑CGCCAAC‑GGGGAAAACGAAATTCAATACCAT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGAGCAACGAGACTGCAAATGTACAGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACGGAGAAATACTTTCTGACTTCGGGGCAGAATGtata < 2:326026/237‑1 (MQ=255) gggAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGa < 1:694409/221‑1 (MQ=255) aaaaaCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATGCAATCCCGT‑CGGTAATGACGAAAGGCA‑GGTGGG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATa < 2:1595043/238‑1 (MQ=255) aCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGtcat < 2:817225/239‑1 (MQ=255) gTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGtcatca < 2:545917/236‑1 (MQ=255) gTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGtcatca < 2:236167/236‑1 (MQ=255) gTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAg < 1:1708303/237‑1 (MQ=255) gTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGca < 1:15473/239‑1 (MQ=255) gTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGca < 1:780953/239‑1 (MQ=255) gTGGCGGCAGGGCGTGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAATGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATGTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTGCGGGTCAGAATGTATAACGTTTACAAATAGtcatca < 2:31710/236‑1 (MQ=255) ggcggcATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGcac < 1:353837/238‑1 (MQ=255) ggcATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTa < 2:1079741/239‑1 (MQ=255) cATGGCCGGTAAAAAAACTTGGCATAACAAACAACTACTAGTGCGTAGAA‑CCCCAAC‑TGGGAAAACGAAATTCAAGTCCGA‑CTGTAAAGACTAAAGGCA‑TGTGAG‑AAGGGCAACGAGACTGCAAAAGTACTGAATTACATGTAGTCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTCCTGACGGCGGGTCAGAATGTATAACGATAACATATAGTCATCAGCACAGTac < 2:835057/238‑1 (MQ=255) aTGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTacac < 2:898185/239‑1 (MQ=255) aaaaaaaCGGCGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGaa < 2:1618110/238‑1 (MQ=255) aaaCGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGAt < 2:634448/239‑1 (MQ=255) aaaCGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGAt < 2:780840/239‑1 (MQ=255) aTAACAATCTACTTCTCGTCCCGAGAA‑CCCCATC‑GGTGAAAAAGATAATCAATACCGA‑CAGTGATGACGAAAGGCA‑GATGAG‑AAGGGCAACGGGATTGCAAATGTACTGAATGTGATGTAAGCAACCGAACCGCCTGTAAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCGGAATGTATAACGATTACAAAAAGACATCAGCACATTAGTCCTAGTGAGTTGATGAGTTGCAt < 2:177463/239‑1 (MQ=255) aTAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCAt < 2:1776712/239‑1 (MQ=255) aTAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCAt < 1:520518/239‑1 (MQ=255) acaaacaaCTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGa < 2:1426260/239‑1 (MQ=255) acaaacaaCTCCTGGGCCGGAGAG‑CCCCAAC‑GGGGAAAACGAAAGTCAAGACCGT‑CGGTAAGGACGAATGGCA‑GGTGAG‑AAGAGCAACGAGACTGCAAATGTACCGAATTTCATGTAATCGACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCATAATGTATAACGATTACAAATATTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGa < 2:1267301/239‑1 (MQ=255) acgccTTGTCAGGAGAA‑CTCCAAC‑GGGGAAAACGAAAGTCAATATCGT‑CGGTAATGACGAAATGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAAGTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTGCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACCCCTCTTGAATTGATGGGTTGCATAGAAAAtata < 2:455351/236‑1 (MQ=255) acTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACTAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTTCCTGTGAACACACAGACAGAGAAATGCTGTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGTTGGGTTGCATAGAAAatatt < 2:1929982/239‑2 (MQ=255) acTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAAtata < 1:1776324/239‑1 (MQ=255) acTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAAtata < 1:885151/239‑1 (MQ=255) ccTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATaca > 1:942442/1‑238 (MQ=255) cTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACAcc < 2:1556278/239‑1 (MQ=255) ccGGAGAA‑CCCCAAC‑TGGGAAAACGAAATTCAATACCGT‑CGGGAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGACACGGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATAGTTTCTGGCTTCGGGGCAGAATGTGTAACGATTACAGCTAGACATCAGAACATTACACCTCTTGAATTGATGGGTTGCATaaaa > 2:943609/1‑224 (MQ=255) ccGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAg < 1:1170955/239‑1 (MQ=255) ccGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACAGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGtcat < 1:1203098/185‑1 (MQ=255) ccccAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTa > 2:1573617/1‑239 (MQ=255) c‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACacaga < 1:818231/116‑1 (MQ=255) aaaCGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGtt < 1:131436/239‑1 (MQ=255) | TAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAAC‑GGGGAAAACGAAATTCAATACCGT‑CGGTAATGACGAAAGGCA‑GGTGAG‑AAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTACAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAATTTGCGGTTAATCAAA > NC_007779/4573008‑4573482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |