Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 601,858 A→G 15.1% E226G (GAG→GGG)  pheP → phenylalanine transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_007779601,8580AG15.1% 395.1 / 17.7 159E226G (GAG→GGG) phePphenylalanine transporter
Reads supporting (aligned to +/- strand):  ref base A (43/89);  new base G (24/2);  total (68/91)
Fisher's exact test for biased strand distribution p-value = 1.01e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 160 total aligned reads displayed.

ACGCCGTTAACCTGGTGAACGTGCGCTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCT  >  NC_007779/601621‑602095
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                 
aCGCCGTTAACCTGGTGAACGTGCGCTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGGGGGCT‑TGAg                                                                                                                                                                                                                                                  >  1:264991/1‑239 (MQ=255)
aCGCCGTTAACCTGGTGAACGTGCGCTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAg                                                                                                                                                                                                                                                  <  2:1185054/239‑1 (MQ=255)
     gTTAACCTGGTGAACGTGCGCTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑At                                                                                                                                                                                                                                           <  1:1832399/239‑1 (MQ=255)
        aaCCTGGTGAACGTGCGCTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTTTGTTCTCC‑TTCGGCGGTCT‑TGGGCT‑G‑ATTgg                                                                                                                                                                                                                                        >  1:1846645/1‑239 (MQ=255)
              gTGAACGTGCGCTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGGGAAAGCCCGTATCGACAACCTCTGGCGCCACGGGGGTTTCTTCGCCACCGGCTGGGAAGGGCTGATTTTGTCGCTTGCGGGTAT‑TTATGTT‑TCC‑TTTGGGGGGTT‑GGGGCC‑G‑GTTGGGGTTat                                                                                                                                                                                                                                  >  2:45437/1‑238 (MQ=255)
                gAACGTGCGCTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGGATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTTTGTTCTTC‑TTCCGCGGTCC‑TGAGGT‑G‑ATTgggggttctt                                                                                                                                                                                                                                >  1:1647091/1‑232 (MQ=255)
                   cGTGCGTTGTTAGGGCGAAACCGAGTTTTGGTTTGCGTGGATTAAAGGGCTGGCAATCATCGGTTTGAGCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCg                                                                                                                                                                                                                             <  2:438257/239‑1 (MQ=255)
                        gcTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTTTGTTCTCC‑TTCGGCGGGCT‑GGGGCT‑G‑ATTGGGATTACTGCCGC‑TGaa                                                                                                                                                                                                                       >  1:592041/1‑239 (MQ=255)
                                 gCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑At                                                                                                                                                                                                                                           <  1:1088881/211‑1 (MQ=255)
                                  cGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑GTTGGGGTTACTGCCGC‑TGAAGCGCCCGAt                                                                                                                                                                                                              >  1:327717/1‑238 (MQ=255)
                                  cGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAAAGGGCCGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑CTTGGGGGGCT‑TGGGCTGG‑ATTGGG‑TTTCTCTCGC‑TGTAAcgcgcgct                                                                                                                                                                                                              >  2:1783939/1‑236 (MQ=255)
                                    aaaCCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑GTTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCg                                                                                                                                                                                                          >  1:1670577/1‑239 (MQ=255)
                                      aCCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGa                                                                                                                                                                                                        >  1:605714/1‑239 (MQ=255)
                                         gAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGaaaa                                                                                                                                                                                                     <  1:1436577/239‑1 (MQ=255)
                                           gTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGGATGGGCTGATTTTGTCGCTGGC‑GGGGA‑TTATTTTTTCC‑CTCGGCGGGGT‑GGGGGT‑G‑GTTGGGGTTTCt                                                                                                                                                                                                                                 >  2:1088881/1‑211 (MQ=255)
                                                     gCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCaaa                                                                                                                                                                                         <  1:1073143/239‑1 (MQ=255)
                                                         tGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGc                                                                                                                                                                                      <  1:1901023/238‑1 (MQ=255)
                                                           aTTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTCA‑TTATTTTTTCC‑TTCGGGGGGCT‑GGGGCT‑G‑ATTTGGATTAATGCCGC‑TGAAGCGCGCGCT‑CCGGGAAAAAAGAATCTCAAAGCGGt                                                                                                                                                                                   >  2:1371648/1‑239 (MQ=255)
                                                            ttAAAGTGCTGGCGATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGt                                                                                                                                                                                   <  1:1387005/238‑1 (MQ=255)
                                                            ttAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGt                                                                                                                                                                                   <  1:1171326/238‑1 (MQ=255)
                                                                agggCTGGCAATTAGCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATc                                                                                                                                                                              <  2:1644204/236‑1 (MQ=255)
                                                                aGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATc                                                                                                                                                                              <  1:1783198/239‑1 (MQ=255)
                                                                aGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATc                                                                                                                                                                              <  1:467078/239‑1 (MQ=255)
                                                                   gCTTGCAATCATCGGTATGAACGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAgg                                                                                                                                                                           <  2:841170/239‑1 (MQ=255)
                                                                   gCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAgg                                                                                                                                                                           <  1:1262003/239‑1 (MQ=255)
                                                                   gCTGGCAATCATCGGTATGACCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAAT‑GGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAgg                                                                                                                                                                           <  1:1500848/238‑1 (MQ=255)
                                                                    cTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAgg                                                                                                                                                                           <  2:949600/238‑1 (MQ=255)
                                                                     tGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCATGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAggtg                                                                                                                                                                         <  1:39312/239‑1 (MQ=255)
                                                                     tGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTTTGTTCTCC‑TTCGGCGGTCT‑GGGGCT‑G‑GTTGGGGTTACTGCCGC‑TGAAAGGCCCGAT‑CCGGGAAAAAGCATTCCAAAAGCCGGAAATCAgggg                                                                                                                                                                         >  1:1191738/1‑237 (MQ=255)
                                                                     tGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAggtg                                                                                                                                                                         <  1:1899161/239‑1 (MQ=255)
                                                                       gCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGc                                                                                                                                                                                      >  1:737409/1‑224 (MQ=255)
                                                                               cGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCa                                                                                                                                                               <  2:1213148/239‑1 (MQ=255)
                                                                                    tGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCctg                                                                                                                                                          <  1:1821342/239‑1 (MQ=255)
                                                                                    tGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCctg                                                                                                                                                          <  2:1740438/239‑1 (MQ=255)
                                                                                     gATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGCGGTTTCTTCGCCACCGGCTGGAAATGGCTGATTTTTTCGCTGGC‑GGTGA‑TTTTTTTTTCC‑TTTGGGGGGCTGGGGGCT‑G‑TTTGGG‑TTACTGGCGC‑TTCAGAGGCCGGG‑CCCGAAAAAAAGATTCCCAAAACCGGAAATCAGGTGGTGGTTCGCATCctt                                                                                                                                                          >  2:417131/1‑237 (MQ=255)
                                                                                      aTCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGGATGGGCTGATTTTGTCGCTGGC‑GGGAATTTTTGTTTCCC‑TTGGGCGGCCT‑GGGGCT‑G‑GTTGGG‑TTATTGGCGC‑TTAAGCCTGCGATCCCGGAAAAATCCATTCCAAAAAC‑GTGAAGCAGGGTGGGTATCGccaccttgc                                                                                                                                                        >  2:1166561/1‑231 (MQ=255)
                                                                                            tttGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTCCGGTGGTGTCTTCGCCACCGGCTGGAATGGGCCGATTTTGTCGCTGGC‑GGTAA‑TTTTTTTTTCCTTTGGGGGGTGG‑TGAGTG‑A‑ATTGGGGTAGCTGCGTCGCCACACGCTCGA‑‑CCGGAAAAAAGAATTCCAAAAACGGTAAGTGAGGGGGTGAAGCGCTTCCGGCGGttta                                                                                                                                                   >  2:1487463/1‑238 (MQ=255)
                                                                                            tttGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAg                                                                                                                                                                            <  2:82597/213‑1 (MQ=255)
                                                                                            tttGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAg                                                                                                                                                                            >  1:82597/1‑213 (MQ=255)
                                                                                              tGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACa                                                                                                                                                >  1:1196909/1‑239 (MQ=255)
                                                                                               ggCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCGACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACAt                                                                                                                                               <  1:66629/239‑1 (MQ=255)
                                                                                               ggCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACAt                                                                                                                                               <  1:894401/239‑1 (MQ=255)
                                                                                               ggCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACAt                                                                                                                                               <  1:513282/239‑1 (MQ=255)
                                                                                                     tgGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATTTTCTCC‑TTCGGCCGTCT‑GGAGCT‑G‑GTTGGGGTTACTTCCGC‑TGAAGCGCGCGAT‑CCGGACAAAAGCATTCCAAAAGCGGTAAATCCGGGGGGGTATCCCCTCCTTCTGTTTTTCATCgggt                                                                                                                                          >  1:1024195/1‑236 (MQ=255)
                                                                                                     tgGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGGGGTTTCTTCGCCACCGGCTGGGATGGGCTGCTTTTGGCGCTGGC‑GGGTA‑TTTTTTTCTCC‑CTCTGGGGGCTGGGGGCT‑G‑TTTGGTGTTCCTGCC‑C‑TGTAAGGGGCGGC‑CCGGAAAAAAGGAATTCTAAAGCAGTAAAGCAAGTGGAGGAACGCCACCCGCGGttttttaaccgtt                                                                                                                                          >  2:287366/1‑229 (MQ=255)
                                                                                                           ctgTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGGAA‑TTTTGTTCTCC‑TTCGGCGGGCT‑GGGGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGGAAAAAGCATTCCCAAAACGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACtggg                                                                                                                                   >  1:811203/1‑238 (MQ=255)
                                                                                                               tttGTGGGCACGGCGGAGAGAAAGCCAGTAGCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATGACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTggtggt                                                                                                                                <  2:1024195/238‑1 (MQ=255)
                                                                                                                  cTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGGATGGGCTGATTTTGTCGCTGGC‑GGGAA‑TTTTATTTTAC‑CTTTGCGGGTT‑GTGGCG‑GTCTGGGGTTTATTGCC‑C‑TGGAGAGCGCCAG‑CCCGGAGAAAACAGTCCCAAAAAGGGAAATCCCGGGGTGGATTGCCACCTGCTCTTTTTCATCGGGTCACTGGCGGgtttt                                                                                                                            >  2:687827/1‑238 (MQ=255)
                                                                                                                    ggTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACt                                                                                                                          <  1:815956/239‑1 (MQ=255)
                                                                                                                       cACTGCGGCGCAAAACCCTGTATCGACGTCCTCGTGCGCTGCGTTGGTTTCGTCGCCACCGGCTTGAATGGTCGTATTTTGTCTCTGGC‑GGTAA‑TTATGTTGTCC‑TGCGCCTGTCT‑GGGGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCAGTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTgg                                                                                                                        <  2:1898878/238‑1 (MQ=255)
                                                                                                                       cACGGCGGCGGGAACGCCATTAACGACAACCTCTGGGGCTCGGGTGGTTTCTTCGCCTCCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTgg                                                                                                                        <  2:1506053/238‑1 (MQ=255)
                                                                                                                        aCGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGGTTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGGGGGGTATCGCATCCTGCTGTTTTACATCGGTTTACTGGTGGGTTTACTGgc                                                                                                                       >  1:1214848/1‑238 (MQ=255)
                                                                                                                          ggcggcGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAgg                                                                                                                                                                           <  2:1844208/184‑1 (MQ=255)
                                                                                                                          ggcggcGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGct                                                                                                                    <  1:1496216/239‑1 (MQ=255)
                                                                                                                               cgAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTAt                                                                                                                >  1:1123694/1‑238 (MQ=255)
                                                                                                                                gagaAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATcc                                                                                                              <  2:1004243/239‑1 (MQ=255)
                                                                                                                                  taaaGCCAGGATCGACAACCTCTTGCGCTACGGTGGTTTCTTCGCCGCCTGCTGGAATGGGCTGATTTTGTCGCTTGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCg                                                                                                             <  2:240370/237‑1 (MQ=255)
                                                                                                                                  gaAAGCCTGTATCGTGTACCTCTGGCGCTACGGTGGTTTCTTCGCGACCGGCTGGAATGGGCTGATTTTGTCGCTGTC‑GGTAA‑TTATGTTCTCC‑GTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTATATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCg                                                                                                             <  2:676046/238‑1 (MQ=255)
                                                                                                                                        cAGTATCGCCAACATCTGGCGCTACGGTGTTTTCTTCGGCGTCGGCTGTAATGGGCTGAGTTTGTCGCTGGC‑GGTAA‑TTATGTTCTTC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGTTGC‑TGAAGCGCCCGAT‑CCGGAAATGAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCGCTGGTGGTTCTACTGGCGCTCTATCCgtgggtgg                                                                                                      <  2:95633/239‑1 (MQ=255)
                                                                                                                                        cAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCgtgggtgg                                                                                                      <  1:1306693/239‑1 (MQ=255)
                                                                                                                                                 aacccTCTGGCGGTAGGGTGGTTTTTTCGCTCCCGGCTGGAATGGGCTGATTTTTGCGCTGGC‑GGTAG‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGaaa                                                                                              <  2:1558191/235‑1 (MQ=255)
                                                                                                                                                  aaCCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATc                                                                                            <  1:390884/239‑1 (MQ=255)
                                                                                                                                                     ctctGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCaa                                                                                         <  1:45437/239‑1 (MQ=255)
                                                                                                                                                       ctGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAggt                                                                                                                                                                          <  2:207384/156‑1 (MQ=255)
                                                                                                                                                       ctGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAggt                                                                                                                                                                          >  1:207384/1‑156 (MQ=255)
                                                                                                                                                        tGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAg                                                                                      <  1:1371648/239‑1 (MQ=255)
                                                                                                                                                         ggCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGt                                                                                     >  1:141172/1‑239 (MQ=255)
                                                                                                                                                          gcgcTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTTTCC‑TTCGGCGGTTT‑GGGGCT‑T‑ATTGGGAGTACGCCCGC‑TGAAAGCCGCGAT‑CCGGAAAAAAGCAATTCAAAAGCGGTAAATAAGGGGGGGGGTCCCATGCTGCTGGTTTACCATGGTACCCTGGGGGTGTTAATTGCGTCCCTTCCGGGTGGGGATGGGAAATCCAACAGTa                                                                                    >  2:790510/1‑239 (MQ=255)
                                                                                                                                                                               cACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTcc                                                               >  1:373926/1‑239 (MQ=255)
                                                                                                                                                                               cACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGGAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGGGCT‑G‑GTTGGGATTACTTCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGGGGGGTATCGCATCCCGCTGTTTTACATCGGTTTCCTGGTGGGTTTACTGGCGCTCTATCCGTGGGGTGAAGTGAAATCCAACCGGAGCCCGTTTGTGATGCTTTTc                                                                >  2:699475/1‑238 (MQ=255)
                                                                                                                                                                                     cTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAAt                                                          <  2:1123694/238‑1 (MQ=255)
                                                                                                                                                                                          aTGGGCTGGTTTGATGGTGGGG‑GGTAA‑TTTGGTTCTCC‑TTCGTCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGa                                                     <  2:980541/238‑1 (MQ=255)
                                                                                                                                                                                            gggCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAg                                                  <  1:1310042/239‑1 (MQ=255)
                                                                                                                                                                                            gggCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAg                                                  <  1:133147/239‑1 (MQ=255)
                                                                                                                                                                                              gCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTATGC‑TTCGGCGGGCT‑GGAGCT‑G‑ATTGGGATTAATGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCCGTAAATCAGGGGGGGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGGTTTACTGGCGCTCTCTCCGGGGGGGGAAGGGAAATCCAAAAGTAGCCCGGTTGGGCTGATTTTTCATAAttgacacagct                                                >  2:457660/1‑229 (MQ=255)
                                                                                                                                                                                               cTGATTTTGTCGCTGGC‑GGTAA‑TTATTGTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCa                                                <  2:1449436/238‑1 (MQ=255)
                                                                                                                                                                                                  aTTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGt                                            >  1:364924/1‑239 (MQ=255)
                                                                                                                                                                                                     ttGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGt                                         <  1:169291/239‑1 (MQ=255)
                                                                                                                                                                                                       gTCGCTGGC‑GGTAA‑TTATGTTTTCC‑TTCGGCGGACT‑GGAACT‑G‑ATTGGGATTACTGCCGC‑TCAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGGGGTGTATCGCATCCTGGCGTTTTACATCGGTTCCCTGGAGGGTGTACTGGCGCACTTTCCCGTGGTGGAAGAGAAATCTGACAGTAGCCCGTGTGTGATTAATTTCCCTAACATCGACAGCAACGTGGAAg                                       >  2:1897057/1‑239 (MQ=255)
                                                                                                                                                                                                            tGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATc                                                                                            <  2:1378855/181‑1 (MQ=255)
                                                                                                                                                                                                            tGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATc                                                                                            >  1:1378855/1‑181 (MQ=255)
                                                                                                                                                                                                                          tGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGCTTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTc                      >  2:605626/1‑239 (MQ=255)
                                                                                                                                                                                                                          tGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGAGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTTGACAGCAACGTGGTAGCTTATGCGCTGAACTTc                      >  2:291276/1‑239 (MQ=255)
                                                                                                                                                                                                                               tcC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCAt                 >  1:12864/1‑239 (MQ=255)
                                                                                                                                                                                                                                 c‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGGATCGCATCCTGCTGATTTACATCGGTTCACTGGTGGTTTTACAGGCGCTCTATCCGTTGGTGGAAGTTGAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGCTCCTTCTGCGCTGAACTTCGTCAt                 >  2:637343/1‑237 (MQ=255)
                                                                                                                                                                                                                                 c‑TTCGGCGGTCT‑GGAGCT‑A‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAACGCATTCCACAAGCGGTAAATCAGGTGGCGTATCGCATCCTGCTGTTTTCCATCGGTTCACTGGAGGTTTTACTGCCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTATCCCGATTGTGATGATTTTCCATAATCTCGACAGAAACGTGGCAGCATCTGCGCTGAACTTCGTCAt                 >  2:1324659/1‑237 (MQ=255)
                                                                                                                                                                                                                                   ttCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCTTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCt              <  1:691005/239‑1 (MQ=255)
                                                                                                                                                                                                                                     cggcggTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGACATCCAACAGCAGCCCGTTTGTGTTGATTTTCTATAATCTCGCCAGCAACGTGGTAGCTTCCGCGCTGAACTTCGTCATTCTgg            >  2:1318647/1‑239 (MQ=255)
                                                                                                                                                                                                                                     cggcggTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTgg            <  1:1055354/239‑1 (MQ=255)
                                                                                                                                                                                                                                     cggcggTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGGTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCggg            >  2:103297/1‑239 (MQ=255)
                                                                                                                                                                                                                                            cT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCAt      <  1:1149579/238‑1 (MQ=255)
                                                                                                                                                                                                                                            cT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCAt      <  1:1754680/238‑1 (MQ=255)
                                                                                                                                                                                                                                            cT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATc     >  1:647150/1‑239 (MQ=255)
                                                                                                                                                                                                                                            cT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATc     >  2:532866/1‑239 (MQ=255)
                                                                                                                                                                                                                                            cT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATc     >  2:1354425/1‑239 (MQ=255)
                                                                                                                                                                                                                                            cT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGAAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCAt      <  2:364924/238‑1 (MQ=255)
                                                                                                                                                                                                                                            cT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATAGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCCTAATCTCGACCGCAACGTGGTAGCTTCGGCGCTGAACTTCGTCATTCTGGTAGcct      >  2:292405/1‑236 (MQ=255)
                                                                                                                                                                                                                                                gAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGTAACGTGGTAGCTTCTgcg                               <  2:720640/210‑1 (MQ=255)
                                                                                                                                                                                                                                                gAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGTAACGTGGTAGCTTCTgcg                               >  1:720640/1‑210 (MQ=255)
                                                                                                                                                                                                                                                 aGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCt  <  1:42014/238‑1 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                 
ACGCCGTTAACCTGGTGAACGTGCGCTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGC‑GGTAA‑TTATGTTCTCC‑TTCGGCGGTCT‑GGAGCT‑G‑ATTGGGATTACTGCCGC‑TGAAGCGCGCGAT‑CCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCT  >  NC_007779/601621‑602095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑