| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 56,379 | T→G | 12.1% | Y244S (TAC→TCC) | lptD ← | LPS assembly protein LptD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 56,379 | 0 | T | G | 12.1% | 452.7 / 3.2 | 166 | Y244S (TAC→TCC) | lptD | LPS assembly protein LptD |
| Reads supporting (aligned to +/- strand): ref base T (53/83); new base G (26/2); total (80/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.62e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 167 total aligned reads displayed.
TGATCCATGACCCCGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCACGCTCCAGGTGTCAGAACCCGGCAGACAGGAGGTAAAGCTACCGTTATCC > NC_007779/56142‑56615 | tGATCCATGACCCCGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTa < 1:465926/239‑1 (MQ=255) tCCATGACCCCGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGaa < 1:117647/239‑1 (MQ=255) tCCATGACCCCGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGa < 1:1009870/238‑1 (MQ=255) tGACCCCGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGaaacac > 2:1897535/1‑235 (MQ=255) tGACCCCGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCa > 1:878601/1‑239 (MQ=255) tGACCCCGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCa < 1:136371/239‑1 (MQ=255) aCCCCGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGATTTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAAATCaaa > 1:4819/1‑239 (MQ=255) aCCCCGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCaaa > 1:1710462/1‑239 (MQ=255) ccccGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCaaa < 1:1442350/238‑1 (MQ=255) cGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAa‑gta‑g > 1:812686/1‑239 (MQ=255) cGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGCGAACTCAaa‑gaa‑g > 2:1269471/1‑239 (MQ=255) cGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGAAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACATCAa‑gta‑g > 1:1281127/1‑239 (MQ=255) ggAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAa‑gta‑gt < 1:376750/239‑1 (MQ=255) ggTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTtgg < 1:422799/237‑1 (MQ=255) ggTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTtgg < 1:18118/237‑1 (MQ=255) tccgatggAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTtggtggt < 2:471520/231‑1 (MQ=255) aTAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACt < 2:771891/237‑1 (MQ=255) ccAACGACGTGAGCGGTCATCGTTCGGTTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCTTCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑TTA‑GTTGGTGGTGGTGTACTTGGCG‑t < 2:397286/239‑1 (MQ=255) ccAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑t < 1:1451627/239‑1 (MQ=255) cAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGGAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAAAACTCCAA‑GTA‑TAAGGGGGTGGGGTAGTTTGCG‑t > 2:1253393/1‑238 (MQ=255) aaCGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTc > 1:593753/1‑239 (MQ=255) aaCGACGTGAACTGTCATCGTTCGGGTGTTCATCTCCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTGGAACACAAA‑AAA‑GTTGGTGGTGGTGTACTTGGCG‑TTc > 2:306601/1‑239 (MQ=255) gAACGGTCATCGTTCGGGTGTTCTTCTTCATAGACTTTGTCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCaa < 2:511337/239‑1 (MQ=255) ttCGGGTGTGCATCTTCATAGACTTTATCTGAAGGCACATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGAAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGAGGCATCTAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATCTGTCAGGTCAAAATCCAA‑AAC‑GTTTGTGTTGGTATACTTGTGG‑TGCGGGGTTaaaaaaagaacacg > 2:1389732/1‑231 (MQ=255) cGGGTGTTCATCTTCATAGACTTTATCTGAATGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGAGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGCACTCAAA‑ACA‑ATTGGTGGTGTTGTACTTGGCG‑CTCGGGAGTCGTAAACCACAGCGAc > 2:1021706/1‑239 (MQ=255) ggTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTTGTGGGGGGGTACTTGGCG‑TTCGGGGTCAAAAAACCAAAGCGACGt > 1:1657774/1‑239 (MQ=255) ggTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGAAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAAATCAAA‑GTA‑TGTGGGGGGGGGGTAATTGGGG‑TTCGGGGTCAAGAAACCAGAGGGACgg > 1:54275/1‑238 (MQ=255) ttCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGGGGGGGTGTACTTGGGG‑GTCGGGATTAAGAAACCCGAGCGACGTTTG‑t > 1:150996/1‑239 (MQ=255) tCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTGGAACTCAAA‑GTA‑AGTTGTGGGGGGGGACTTTGCT‑GTCGGGGTCAAGAAAACAGAGCTACGTTTG‑Tcaccca > 2:1146554/1‑238 (MQ=255) tCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAAATCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑Tcaccca > 1:1758048/1‑238 (MQ=255) aGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGc < 2:282747/239‑1 (MQ=255) gccTTTAGCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGGCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCGTCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGc < 2:1313125/236‑1 (MQ=255) cTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCa < 1:1897535/237‑1 (MQ=255) ttATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACt > 1:1746708/1‑238 (MQ=255) ttATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAAATCAAA‑ATA‑GTTCGTGGTGGGGTACCCGGCG‑GTCGGGGTCAAGAAACACGAGCGACGTTTGTTCACCC‑CCGGccccc > 2:1803030/1‑234 (MQ=255) aTCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAA‑GTA‑GTTGGTGGTGGGGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCa > 1:842596/1‑239 (MQ=255) gAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATa < 1:762977/239‑1 (MQ=255) aaGGCAGATAGTCCGTTTCCAACAAGCCAGCGCACGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACACACCGGCAACTGCCAATa < 2:704876/238‑1 (MQ=255) aaGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAA‑GTA‑GTTGGTGGGGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAg > 1:1607049/1‑239 (MQ=255) cAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAgggg < 1:1204190/238‑1 (MQ=255) cAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGGAGCGGAATGCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAgggg < 1:1803030/238‑1 (MQ=255) gATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATCTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCta > 1:1408656/1‑239 (MQ=255) gTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGGGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATaaa > 1:763983/1‑239 (MQ=255) cAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGa > 2:196012/1‑239 (MQ=255) tCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGGACTTGGCG‑GTCGGGGTCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCgg > 1:87161/1‑239 (MQ=255) tCAAGCCAGCGCCCGCCTGGGATAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGGTGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTGGGACTCCAA‑GAA‑AGTGGTGGTGGTTTTCTTGGCG‑TTCCTGAGTAAGAAACCAAAGCAACGTTTG‑TCACCCCCCGGCATCTGCCAACAGGGGCCATaaaaaaatgggtc > 2:103140/1‑229 (MQ=255) tCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTAcc > 1:338853/1‑239 (MQ=255) tCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACATTTG‑TCGCCCACCGGCAACTGCAAATAgggg > 1:926925/1‑221 (MQ=255) tCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACATTTG‑TCGCCCACCGGCAACTGCAAATAgggg < 2:926925/221‑1 (MQ=255) cAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGAcc < 2:1746708/238‑1 (MQ=255) cAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGAc < 2:1408656/237‑1 (MQ=255) cAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGAc < 1:1887064/237‑1 (MQ=255) cAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGAc < 1:200909/237‑1 (MQ=255) ccTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGGTCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTaaa > 1:1852410/1‑238 (MQ=255) tGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCg < 1:1514797/239‑1 (MQ=255) gagaGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCggg < 1:82235/238‑1 (MQ=255) gagaGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCggg < 1:1269471/238‑1 (MQ=255) tAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTc < 1:689828/237‑1 (MQ=255) aaGCGGACTTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGACGTTCCAGTAATATGGCAGGCAGAACCCAAA‑ATAGGTTGGGGGGGGGGACCTTGGGG‑TT‑GCGACCAAGAAACCAGAAGGACGTTTG‑TCACCCACCAGCCACTGGAAAAACGGGGTTTAAACAATCGGCACCGGCACCAACTTAAAGCGGCCggcaca > 2:1774221/2‑234 (MQ=255) gCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAAAAACCAAA‑GTA‑GTTGGGGGTGGTGTACTTGGCG‑GTCGGGGTCAAGAAACCAGAGCGGCGTTTG‑TCCCCCCCCGGCGACTCCCAATAGGGGGTCAAAAAAATCGGTGACGGAACCCCCCTAAAGCGGGCGGTTCAGa > 2:1880812/1‑239 (MQ=255) cGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGAt < 2:1465011/203‑1 (MQ=255) cGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGAt > 1:1465011/1‑203 (MQ=255) aaTTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTtgg < 1:1356959/115‑1 (MQ=255) ttCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGGGGTGGGGTACTTGGCG‑TTCGGGATCAAGAAAACAGAGCGACGTTTG‑TTACCCACCGGCAACTTCCAAAAAGGGCTATAAAAAATCGGTACCGGACCCACCTTAAAACGGGCGGTCCAGATCTcc > 1:272512/1‑238 (MQ=255) tCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGc < 2:593753/239‑1 (MQ=255) tgatgTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTcg < 2:756817/239‑1 (MQ=255) gatgTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGGTCCAGATCTCCGCAACTTGTTCTTcgc > 1:1085488/1‑239 (MQ=255) tgTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTTGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑Tcac > 1:6129/1‑147 (MQ=255) tGCCACGACGATGCATATAATGCTGCGGTATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCACA‑GTA‑GTTGGTGGTGGTGTACGTGGCG‑TTCAGGAGCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTc < 2:4819/238‑1 (MQ=255) tGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCa < 1:1021706/239‑1 (MQ=255) tGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCa > 1:55029/1‑239 (MQ=255) ataATGCGGCGTGATGGTGGCTTCCATATTTGGCGCGATGGTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGctac < 2:198221/239‑1 (MQ=255) ataATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGctac < 1:293842/239‑1 (MQ=255) tGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACACAAA‑AGA‑TTTGGTGGGGGGGTAAGTGGAT‑GTCGGGGTCAAAAAAGCAGAGCGACGGTTG‑TCGCCCAACGGGAACTGGAAATAGGGGCGATAAAAAAACGGTTGCGGACCCACCGTAAAGCGGGGGTTTCAGATCTACACACCTTGTTATTTCCGGCCATGAAAAATTTTGctcccca > 2:1429573/1‑236 (MQ=255) gcggcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATaa > 1:621515/1‑152 (MQ=255) gcggcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATaa < 2:621515/152‑1 (MQ=255) cggcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAAATCAAA‑AAA‑GATGGTGGGGGTGTACTTGGCG‑GTCGGGGTTAAGAAACCAGAGCGAAGTTTG‑TCACCCACCGGGAACTGGAAAAAAGGGGTATAAAAAAGAGGAAACGGCCCCCCCCCAAAGGTGGCGATCCAGATGACCGCAACCTTTTTTGCGCGGGTCTTAATAAATTCGccaacttcc > 2:1189659/1‑230 (MQ=255) ggcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCa < 2:1847908/238‑1 (MQ=255) ggcgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAAATCAAA‑ATA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAAACAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAAGGGCAATAAAAGATCGGTATCGGACCCCACTTACAACGGGCGTTTCAGATATCCGCAACTTTTTCTACCCGGGCATGACTAATTTACCtacctcccc > 2:857560/1‑237 (MQ=255) ggcgTGATGGTGGCAGCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGGGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCa < 1:1342450/238‑1 (MQ=255) ggcgTGATGGCGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCCGGGAGAACCCAAACGCA‑G‑TGGGGGGGGGGTACTTGGAGCTCCGGGCTCAAG‑AACCAAAGCGTCGCTTT‑CCACCCACCGGGCACTCCTAACAGGGGAGTTCAATAAAACCAACCGGCACCCCCTTCAAGCGGGGGTTCCAGATATCCCCAGCCTGCTCTGCGCGCTACTTAATAAATTTGCTACCTACCa > 2:1535408/1‑238 (MQ=255) cgggATGGTGGACTCCATATTTGGCGCGATGTGCCAGTAATATGGCAGGGAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCACg < 2:1833716/235‑1 (MQ=255) cgTGATGGTGGCATCCATCTTTGGCGCGATGTTCCAGTAATATGGCAGGTGGAACCCAAA‑GTA‑GGTGGTGGGGGTGTACATGGCG‑GTCGGGATAAAGAAACCCCCGCGGCGTTTT‑TCCACCACCGCCAACTGCAAATAAGGGCGATAACAGGCCCCGAACGGACCCACCCTAAAGCGTGCGTTCCACATCTCCGCACCCTGTTCGTCTCCGTCATGGATAATTTCGcaaactacacag > 2:1619218/1‑234 (MQ=255) cgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGAcc > 1:772696/1‑165 (MQ=255) cgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCCCCTTAAAGCGGGCGGTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAACAATTTCGCTACCTACCACg > 1:460014/1‑238 (MQ=255) cgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAAATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCACg > 1:1777762/1‑238 (MQ=255) cgTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCCAA‑GTA‑GTTGGGGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGGTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCCCCTTAAAGCGGGGGTTCCAAAACCCCGCAACTTGTTTTTCGCGGCCATGAAAAATTTCGCTACCCAacacc > 2:1501183/1‑237 (MQ=255) ggtggCATCCATATTTGGCGCGATGTTCCAGTAGTATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCACGCTCCAg < 2:138148/238‑1 (MQ=255) gCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGGAGAACTCAAA‑ATA‑GTTGGGGGTGGGGTACTTGGCG‑TTCGGGGTCAAGAAAACAGAGCGACGTTTG‑TTACCCACCGGCAACTGCAAATAGGGGCTATAAAAAAACGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCCACTTGTTCTTCGCGGTCATGAATAATTTCGCTCCCTACCACCCTCCAgggggc > 2:815806/1‑235 (MQ=255) aTCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAAATCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAAATGCAAATAGGGGCTATAAAAGAACGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCACGCTCCCGGGGTCAg > 1:217498/1‑239 (MQ=255) tCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGGGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCCCTACCTACCACGCTCCAGGTGTCAGa > 1:970456/1‑239 (MQ=255) atTTGGCGCGATGTTCCAGTAATATAGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATGTCGCTACCTACCACGCTCCAGGTGTCAGAACCCg < 2:1648323/239‑1 (MQ=255) tgggtggATGTTACAGTAATATTGCAGGTAGAACCAAAA‑GGA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATGAAGAAGCCAGAGCGGCGGTTG‑TCACCCACCGGCAACTGCAAATAGGGGGTATAAAAGCTCGGTAGCGGACGCGCCTTAAAGCGGGCGTTCCAGAAGTCCGCGTGTTGTTCTTCGCGGTCATGAATAATTTCGCTTCCTGCCACGCGCCAGGTGTCAGAACCCGGCa < 2:1355635/233‑1 (MQ=255) cgcgATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGGGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCCCCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCACCCTCCAGGGGCCAGAACCCGGCAGAc > 1:167205/1‑239 (MQ=255) gcgATGGTCCCGTACTATTGCAGGTAGAACTCACA‑GTA‑GTTGGTGTTGGAGTACTGGGCG‑TTCGTAATCAAGAAACCAAAGCGACGTTTG‑TCTCCCAACAGCAACTGCAAATAGGGGCTATAAAAGAACGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAAGTTCGCTACATACCACGCTCCAGGTGTCAGAACCCGGCAGAc < 2:1126775/238‑1 (MQ=255) cgATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCGCCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCACGCTCCAGGTGTCAGAACCCGGCAGACa < 2:1408881/238‑1 (MQ=255) cgATGGTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGGACTTGGCG‑TTCGGGAACAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAGAGAGGTGCTATAAAAGGTCGTTACCGGACCCGCCTTAAAGCGGGCGTGCGAGATCTCCGCATCTTGTTGTTCGGGGTCATGAATAGTTTCGCTACTTGCCACGCTCCAGGTGTCAGAACCCGGCAGACa < 2:478710/238‑1 (MQ=255) aaTATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCACGCTCCAGGTGTCAGAACCCGGCAGACAGGAGGTAAAGc < 2:812686/237‑1 (MQ=255) atGGCAGGAAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCACGCTCCAGGTGTCAGAACCCGGCAGACAGGAGGTAAAGCTACCg < 2:1758048/239‑1 (MQ=255) ggTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGGTCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGGTATAAAAGATCGGCACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGGCATGAATAATTTCGCTACCTACCACGCTCCAGGTGTCAGAACCCGGCAGACAGGAGGTAAAGCTACCGTTATcc > 1:1227394/1‑239 (MQ=255) | TGATCCATGACCCCGGAGTGGTTCCAGTAGAATAACCAACGACGTGAACTGTCATCGTTCGGGTGTTCATCTTCATAGACTTTATCTGAAGGCAGATAGTCCAGTTCCATCAAGCCAGCGCCCGCCTGGGAGAGGTAGCGGAATTCGTTCTCCCACATGATGTTGCCACGACGATGCATATAATGCGGCGTGATGGTGGCATCCATATTTGGCGCGATGTTCCAGTAATATGGCAGGTAGAACTCAAA‑GTA‑GTTGGTGGTGGTGTACTTGGCG‑TTCGGGATCAAGAAACCAGAGCGACGTTTG‑TCACCCACCGGCAACTGCAAATAGGGGCTATAAAAGATCGGTACCGGACCCACCTTAAAGCGGGCGTTCCAGATCTCCGCAACTTGTTCTTCGCGGTCATGAATAATTTCGCTACCTACCACGCTCCAGGTGTCAGAACCCGGCAGACAGGAGGTAAAGCTACCGTTATCC > NC_007779/56142‑56615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |