BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	954,782	T→A	13.8%	Y36F (TAT→TTT)	focA ←	formate transporter FocA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	954,782	0	T	A	13.8%	236.3 / 7.0	114	Y36F (TAT→TTT)	focA	formate transporter FocA
Reads supporting (aligned to +/- strand): ref base T (46/49); new base A (4/13); total (50/64)
Fisher's exact test for biased strand distribution p-value = 6.76e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 115 total aligned reads displayed.

CAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGT  >  NC_007779/954548‑955017

cAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCACC‑AGATAGa                                                                                                                                                                                                                                           <  1:420646/238‑1 (MQ=255)

cAGTATTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATGAACACGGTGGAAGTAAAGAGATCGGCGCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGa                                                                                                                                                                                                                                           <  2:1347186/238‑1 (MQ=255)

   tttttCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGACTCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATCCGATT‑GAGCTGAAAACACC‑GGCGGG‑AA‑TCGCC‑ACATAAAAAGt                                                                                                                                                                                                                                       >  2:1322894/1‑239 (MQ=255)

   tttttCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGTAAA‑TCG‑C‑AGATAGaaaaa                                                                                                                                                                                                                                       >  2:1016565/1‑237 (MQ=255)

        cGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTaa                                                                                                                                                                                                                                  <  2:901815/239‑1 (MQ=255)

         gCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAg                                                                                                                                                                                                                                 <  1:38619/239‑1 (MQ=255)

                    ccAGGTTATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCg                                                                                                                                                                                                                      <  2:518830/239‑1 (MQ=255)

                    ccAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCg                                                                                                                                                                                                                      <  1:1642584/239‑1 (MQ=255)

                    ccAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCg                                                                                                                                                                                                                      <  1:1380226/239‑1 (MQ=255)

                    ccAGGCGATACAGCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTATAGAGAACGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAATGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGGAAGTCTTAAGCGGATGTTTCg                                                                                                                                                                                                                      <  2:22912/239‑1 (MQ=255)

                         tGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGtt                                                                                                                                                                                                                    <  1:1051538/236‑1 (MQ=255)

                         tGATGCGCCCACTCGCCGTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGCCTTAAGCGGATGTTTCGtt                                                                                                                                                                                                                    <  1:1492099/236‑1 (MQ=255)

                           aTGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCttt                                                                                                                                                                                                               >  1:1040382/1‑239 (MQ=255)

                           aTGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCCGAGGTTTCGTTGCttt                                                                                                                                                                                                               >  1:18258/1‑239 (MQ=255)

                           aTGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAAAGAAAAGCTTAAGCGGATGTTTAGTTggctt                                                                                                                                                                                                               >  2:269053/1‑235 (MQ=255)

                                cccACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGGTTT‑ATAGa                                                                                                                                                                                                         >  1:1346650/1‑239 (MQ=255)

                                                   acaaTCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TTGCC‑AGATAGAAAGACTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCCGCCa                                                                                                                                                                                       >  1:624739/1‑238 (MQ=255)

                                                   acaaTCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGaa                                                                                                                                                                                                                                          >  1:1260166/1‑188 (MQ=255)

                                                   acaaTCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGaa                                                                                                                                                                                                                                          <  2:1260166/188‑1 (MQ=255)

                                                   acaaTCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGAGGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGcc                                                                                                                                                                                        >  1:280634/1‑237 (MQ=255)

                                                       tCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCg                                                                                                                                                                                                                      <  1:1332842/204‑1 (MQ=255)

                                                       tCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTg                                                                                                                                                                                  >  1:128670/1‑239 (MQ=255)

                                                            acGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAATCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCAt                                                                                                                                                                             >  1:871448/1‑239 (MQ=255)

                                                            acGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGG‑AA‑TAGCC‑CGAAAGAAAGGCTTAAGCGGGAGTTTCCGTGCTTT‑TTAGACACCCGCCACTTCGGCCACTTTGGGCaa                                                                                                                                                                             >  2:380150/1‑238 (MQ=255)

                                                               gTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTg                                                                                                                                                                           >  1:1147672/1‑238 (MQ=255)

                                                               gTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCCCC‑AGATAGAAAGGCTTAAGGGGATGTTTCGTTGCTTT‑TTAGACAACCGCCTCTTCCGGCCCTTTGGCCAttt                                                                                                                                                                           >  2:1553841/1‑237 (MQ=255)

                                                                tGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTTGCCATTgca                                                                                                                                                                         >  1:1767693/1‑239 (MQ=255)

                                                                   aaGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTgcagca                                                                                                                                                                      >  1:256626/1‑239 (MQ=255)

                                                                    agaaaaGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACCCC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTgcagca                                                                                                                                                                      <  1:372019/235‑1 (MQ=255)

                                                                     gTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGAAAGAAAGACTTAAGAGGACGGTTCGTTGGCTT‑ATACACACCCCCCCCTTTGGCTACTTTGGCCAATgcacacag                                                                                                                                                                    >  2:1254173/1‑234 (MQ=255)

                                                                       aaaGAGTGCGCCCCCGCAGACAAAAAAAAAAACCAGCCCCGAGGAGAAGAAAGGGCCGCA‑ACCCAGTTTG‑GCAAGGCCGAAGGGTATGGGGCTGGGGCCGGTGGTTGTGGGAATAAAGAAGACGAAGGCGTTG‑GAGATAAAAACCCC‑GGGGGT‑AA‑TCACA‑AGAGAGAATGTTTAAAGGGGATGTTT‑GTTGGTTTGAAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAgg                                                                                                                                                                    <  2:1767693/237‑1 (MQ=255)

                                                                       aaaGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCAGGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGTTT‑GAGATAAAACCCCC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGGGGTTTTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAgg                                                                                                                                                                    <  1:1493696/237‑1 (MQ=255)

                                                                        aaGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TTGGC‑AGAAAGAAAAGTTTAAGGGGATGTTTTGTTTCTTT‑AAAAACACCCCCCTCCTCCGGCACTTTGGGCATTTCAGCCAGAAg                                                                                                                                                                 >  2:48035/1‑239 (MQ=255)

                                                                        aaGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAg                                                                                                                                                                 >  1:1590687/1‑239 (MQ=255)

                                                                            gaTCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTTGCCATTGCAGCAGGAAGTaaa                                                                                                                                                             >  1:661769/1‑239 (MQ=255)

                                                                                  cTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGGAAAAGATCa                                                                                                                                                       >  1:1065842/1‑239 (MQ=255)

                                                                                  cTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAATCTTAAACGGATGTTTTGTTGCTTT‑ATAGACACCCGCCCCCTCGGGCCCCTTGGCCATTGCAGCAGGAAGAAAAAGaata                                                                                                                                                       >  2:1725802/1‑236 (MQ=255)

                                                                                  cTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCCCC‑AGATAGAAAGTCTTAAGCGGGAGTTTCGTTGGTTT‑ATAGACACCAGCCTCTTCGGCCACTTTGGTCATTGCAGCAGGAAGTAAAAGATCa                                                                                                                                                       >  1:635283/1‑239 (MQ=255)

                                                                                            aacaCAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGGTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGG‑AA‑GAGTC‑CCATAGGAAGTATTTAGTGGATGGTTAGTTGCCTT‑ATAGAGCACCGCATCTTCGGCCAACTTGGCCATTGAAGCAGGAATAAAAAGATCAACAGTGtttt                                                                                                                                             >  2:1866055/1‑237 (MQ=255)

                                                                                                   aGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAAGGCGATT‑GAGATAAAACCCCC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGTTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCttt                                                                                                                                      <  1:1340105/239‑1 (MQ=255)

                                                                                                   aGAATCAGCCCCAGAGAGAAGAAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAGGGGCTTTGTGCCTGTGCCAGTGGTTGTTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACATC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGTTGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCttt                                                                                                                                      <  1:1916881/239‑1 (MQ=255)

                                                                                                      aTCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGGTTCGTTGCTTT‑ATAAACACCCGCCTCTTCCGCCACTTTGGCCATTGCAACAGGAAGGAAAAAATCAAAAGGGGTGTCAGGTTTaac                                                                                                                                   >  2:80615/1‑239 (MQ=255)

                                                                                                       tCACCCCCAGAGAAAAGCAAATGCCCCC‑ACCCATTTTT‑CCCATGCCGAAGGGCATTGTCCCTGTGCCAGTGTTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAACCCCC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTTTTAAGGGGTTTTTTCGTTGTTTT‑ATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTcaca                                                                                                                                  <  1:1270718/239‑1 (MQ=255)

                                                                                                       caccccccAGAGAGAGGC‑AATGCCCCCAAACCATTTTT‑GCGTGGCCGAGGGGATTTGTGCTGGGGCCAGTGTTGTGTTTGATATAAAAGAAGAATGCGATA‑GAAATGAAACCCCC‑GGCGGT‑AA‑TCCCC‑AGATAAAATTTGTTAAGCGGTTTTTTCTTTGCTTT‑AAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAAGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTcaca                                                                                                                                  <  2:365297/235‑1 (MQ=255)

                                                                                                         aGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TTGCC‑AGATAGAAAGTCTTAAGCGGATGTTTTGGTGATTT‑ATAGAAACCCGCCTCTTCGGCCACTTTGGCCCTTGCGGTAGGTAGTAAAAGATCAAAAGGGTTGGGAGCttttccccc                                                                                                                                >  2:1305985/1‑233 (MQ=255)

                                                                                                           ccccAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCCTCGGCCACTTTGGCCATTGTAGGAGGAAGTAAAAGAACAAAAGGGTTGTCAGCTTTCACACTaa                                                                                                                              >  2:949369/1‑239 (MQ=255)

                                                                                                           ccccAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCCCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGGAAAAGATCAAAAGGGGTGTCAGCTTTCACACTa                                                                                                                               >  1:1253300/1‑238 (MQ=255)

                                                                                                              ggagaggaacgaaaTGGCGGC‑AACCAGTTTTCGCCAGGAGGAGGGGTTTTGGGCTGGTGCCAGTGGTTTTTTTGAAATAGAGGAGGAAGGCGTTG‑AAGAAAAAACCCCC‑GGCGTA‑AA‑TCCCG‑AGAAAAAAGTTCTTAAGCGTTTTTTTTTTTGCTTT‑ATGAACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAAct                                                                                                                            <  2:600787/228‑1 (MQ=255)

                                                                                                               agagagAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTTAGCGGAGTTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTTCAGCCGGAAGTAAAAGATCAAAAGGGTTTGTAGCTTTCACactcactc                                                                                                                           >  2:890992/1‑238 (MQ=255)

                                                                                                                gagagaAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCCAAAGGGTTGTCCGCTTTCACACTAActc                                                                                                                           >  1:1637215/1‑237 (MQ=255)

                                                                                                                  gaagagaaaaTCCAGCC‑AACTTTTTTG‑GCCATGCAAAGGGGATTTGGCCCTGTGCGTGTGGTTGATGGAATAGAGAAAAGAAAGGATATA‑GAGATAAAAACCCG‑GGGGGT‑AA‑CCCAC‑AGAAAGAAATTGTTAAGGGGTTGTTTCGTTGCTTT‑AGACACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAActctct                                                                                                                        <  2:1928213/231‑1 (MQ=255)

                                                                                                                     aaGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCttt                                                                                                                    >  1:1737534/1‑239 (MQ=255)

                                                                                                                               cgcc‑AACCAGTTTT‑GCTATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑TA‑TCGCC‑AGATAGAAAGTCTTAAACGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCCTCGGCCACTTTGGCCATTGCAGCAGGAAGGAAAAGAACAAAAGGGGTTTCAGCCTTACCAATAACTCTCCCTTTTATAAATCga                                                                                                          >  2:874039/1‑238 (MQ=255)

                                                                                                                                    aaCCATTTTT‑GCCATGCCGAGGGGCATTGTGCCTGTGCCAGGGTTTGCTGTAATATAAAAGACAAATGCGATT‑GAGAAAAAAACCCC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGTATTTTTCTTTGTTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGcgac                                                                                                      <  1:1553841/239‑1 (MQ=255)

                                                                                                                                      ccAGTTGT‑GCGAGGCGGAGGGGCGTTGGTCGTGGGCTAGTGTTTGTTGTAAAAAAAAAGACAAATGCGATT‑AAGATAAAACCCCC‑GGTGGT‑AT‑CCACA‑ATATAAAAAGTCTTAAGTTGGTTTTTTGTTGTTTA‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGcgacga                                                                                                    <  2:256626/239‑1 (MQ=255)

                                                                                                                                               gcctggcggAAGGGCATTGGGCCGGTGCCAGTGGTGGTTTTGATATAGAGGACGAATGCGATT‑GAGATAAAACCCCC‑GGCGTT‑AA‑CCCCC‑AGAAAGAATGTTGTAGGGGGTTTTTTTGTTGTTTT‑ATAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTaa                                                                                            <  2:1846954/231‑1 (MQ=255)

                                                                                                                                                 ctggcggAAGGGCATGGTGCCTGTCCCAGTGTTTGTTTGGATATAGAAGACGAATGCGATG‑GAGATAAAAACCCC‑GGCGGT‑AC‑TCGCA‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGTTTA‑ATAGCCGCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACa                                                                                          <  1:1866055/233‑1 (MQ=255)

                                                                                                                                                 cATGCCGAGGGGATTTGTGCTGGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATAAAAACACC‑GGCGGT‑AA‑TCGCA‑AGAAAGAAAGTCTTAAGGGGTTTTTTCGTTGTTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACa                                                                                          <  1:581760/239‑1 (MQ=255)

                                                                                                                                                 cATGCAGAAGGGTTTTGGGCCTGTGCGAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAACCACC‑GGCGGT‑AA‑CCGCC‑AGAAAGAAAGTCTTAGGCGGTTTTTTCGTTGTTTT‑ATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACa                                                                                          <  1:1305985/239‑1 (MQ=255)

                                                                                                                                                    gCCGAGGGGCTTTGTGCCTGTGCCAGTGTTTGCTGTGATATAGAAGACAAATGCGATT‑GAGATAAAAACCCC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGTTGTTTCGTTGTTTT‑ATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAg                                                                                       <  1:1908623/239‑1 (MQ=255)

                                                                                                                                                    gCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACCCC‑GGCGGT‑AA‑TCGCA‑AGATAGAAAGTCTTAGGCGGTTTTTTTGTTGCTTT‑AGAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAg                                                                                       <  1:1417530/239‑1 (MQ=255)

                                                                                                                                                     ccGAGGGGGTTTGGGCCTGTGCGGGTGGTGGCGGTAATAAAGAAGACGAATGCGTTT‑GAGA‑GAAAACCCCGGGGGGT‑AA‑CCGCC‑AGATAGAAAGTCTAAAGGGGATTTTTCGTTGTTTA‑AAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACaa                                                                                         <  1:1322894/236‑1 (MQ=255)

                                                                                                                                                     ccGAAGGGCTTTGTGCTTGTGCCAGTGGTTGGTGTTATATAGAAGACGAATGCGATG‑GAGATGAAACCCCC‑GGGGGT‑AA‑TCGCC‑AGATAGAAAGTCTAAGGCGGTTGTTTGGTTGTTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAg                                                                                       <  1:792552/238‑1 (MQ=255)

                                                                                                                                                              tttGTGCCTGGGCGAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATAAAAACCCC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGTTTTTTCTTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGAt                                                                             <  1:1725802/238‑1 (MQ=255)

                                                                                                                                                              tttGTGCCTGGGCCGGTGGTTGCTGTGATATAAAAGAAGAATGCGATT‑GAGATGAAACCCCC‑GGCGGT‑AA‑CCGCC‑AGATAGAAATTCTAAAGGGGTTGTTTGGTTGTTTT‑AAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGa                                                                              <  1:890992/237‑1 (MQ=255)

                                                                                                                                                                tgtgcctgtgccGGGGGTTGTGGTAATAGAGAAAAGGAATTAGATT‑GAGATGAAAACCCC‑GGGGTT‑AA‑TCGCC‑AGAAAGAAGTTCTTAGGGGGTTGTTTCGTTTCTTA‑ATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATga                                                                           <  2:820035/239‑1 (MQ=255)

                                                                                                                                                                     ttgtgccGGTGTTGGCTTGAATATAGAAG‑CGAAAGGGGTTGGAGATAAAACCCCC‑GGCGTT‑AA‑TCGCA‑AGATAGAAAGTCTTAAGCGGATGTTTTGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAAt                                                                      <  1:1373867/238‑1 (MQ=255)

                                                                                                                                                                     gtgggctaGTGGTTGCGGTGATATAGAGGAGAAATGCGATG‑GAGATAAAAACACC‑GGGGGT‑AA‑CAGCC‑AGATAGAAAGTCTTAAGCGGTTTTTTCTTTGTTTT‑AAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGaaa                                                                       <  2:1395306/231‑1 (MQ=255)

                                                                                                                                                                     ctgtgccAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTcaca                                                                                                                                  >  1:165309/1‑179 (MQ=255)

                                                                                                                                                                       gtgccAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑CGATAGAAAATCTTAAGCGGATGTTTCGTTTCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAAGGTTGTCAGCTTTCACACTAACTACCTCTTTATTAAGTCGGCGACCAAGTACTAACAAAACATTATAAATGAGAAAttt                                                                    >  2:1468435/1‑238 (MQ=255)

                                                                                                                                                                        tgccAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAAAAAAGCATTATAGATGAGAAATTGa                                                                   >  1:1094027/1‑239 (MQ=255)

                                                                                                                                                                          caaGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAACCCCC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCTTTGTTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGat                                                                  <  1:1647175/236‑1 (MQ=255)

                                                                                                                                                                           gagggttggtggtgATATAGAAGAAGAAGGCGGTG‑AAGATAAAAACACC‑GGCGTA‑AA‑TCGCC‑AGAAAGAATGTTTAAAGGTGATGTTTCGTTGTTTT‑AAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                 <  2:624739/227‑1 (MQ=255)

                                                                                                                                                                           cggggtttGCTGTAATAAAGAAGACGAATGCGATG‑GAGAGAAAAACCCG‑GGCGGT‑AA‑CCGCA‑AGATAGAAAGTCTTAGGGGGTTGTTTCTTTGTTTA‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                 <  1:464103/232‑1 (MQ=255)

                                                                                                                                                                           cAGTGGTTGCTGTGATAAAGAAGAGGAATGCGATT‑GAAATAAAAACCCC‑GGCGTT‑AA‑CCGCC‑AAATAGAAATTTTTAAGGGGATTTTTGGTTGCTTT‑AAAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGatat                                                                <  1:1344161/239‑1 (MQ=255)

                                                                                                                                                                           aggtgttggttgtaATAAAAAAGACAAGTGCGTTT‑GAGATGAAACCCCG‑GGCGTA‑AC‑CCGCC‑AGAAAGAAAGTCTAAAGGGGTTGTTTCGTTTTTTT‑AAAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata                                                                 <  1:380150/228‑1 (MQ=255)

                                                                                                                                                                                gtggCTGTGAAAAAGAAGAGAAATGCGATG‑GGAAAGAAAACACC‑GGGGTT‑AT‑CCGCC‑AAAAAAAAAGTTTAAAGGGTATGTTTGGTTCTTTA‑AAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGAt                                                            <  1:1721851/235‑1 (MQ=255)

                                                                                                                                                                                gTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATc                                                           >  1:224504/1‑239 (MQ=255)

                                                                                                                                                                                   gCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGGC‑AGGTAGAAAGACTTAAGAGGATGGTTTCTTGATTT‑CTAGACACCCGCCTCCTCGGCCACTTTGGCCAGTGCAGCCAGAAGTAAAATAACAAAAAGGTTGGTAGCTTTTACACTAATTCTCTCTTTATTAAATCAGGGACCAGAAAATAAAAAAACCTTATAAAAGAGAAAATAAtataaaactta                                                        >  2:1277523/1‑232 (MQ=255)

                                                                                                                                                                                   gCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑TTAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAAATCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAACATtata                                                                                >  1:773381/1‑215 (MQ=255)

                                                                                                                                                                                       tgATATAGAAGAGGAATGCGATT‑GAGATGAAAACCCC‑GGCGGT‑AA‑TCGCC‑AGAAAGAAAGTCTTAAGGGGTTGTTTCTTTGTTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGatat                                                                <  1:656619/227‑1 (MQ=255)

                                                                                                                                                                                         atatAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCg                                                   >  1:322475/1‑238 (MQ=255)

                                                                                                                                                                                          tataGAAGACGAATGCGTTG‑GAGATAAAAACCCC‑GGCGGT‑AA‑CCGCA‑AGATAGAAAGTCTTAGGGGGATTTTTCGTTGTTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGcc                                                 <  1:1684647/239‑1 (MQ=255)

                                                                                                                                                                                          taaagaagaCAAATGCGATT‑GAGAAGAAAACCCG‑GGGGGT‑AA‑TCGCC‑AGATAGAAAGTATTAAGGGGGTGTTTCGTTGTTTT‑AAAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGcc                                                 <  1:1039381/236‑1 (MQ=255)

                                                                                                                                                                                          taaaaaggaaaaaTGCGATG‑GAGAT‑AAAACCCC‑CGCGGG‑AACCCCCC‑AGAAAAAAATCTTTAAGCGGGTTTTTCTTTGTTTT‑AGAGCCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGcc                                                 <  1:812845/228‑1 (MQ=255)

                                                                                                                                                                                          aataAAAGACAAAGGCATTG‑GAGAT‑AAAACCCC‑CGGGGT‑AA‑ACCCCAAGATAAAAGGTCTTAAGCGGTGTTTTCTTTGTTTT‑ATAGACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGcc                                                 <  1:687674/238‑1 (MQ=255)

                                                                                                                                                                                               aagaCGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGGAAAAGATCAAAAGGGATGTCAGCTTTCACACTAACTCTCTCTTTATTAAGACGGCGAAGAGATACTAACAAAACATTATAGATGAGAAAATGATATAAAACATATCTCGCCTGGCt                                            >  1:1651662/1‑239 (MQ=255)

                                                                                                                                                                                                 gaCGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGGTGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCCGCTTTCACACTAACTCTCTCTTTATTAAATCGGCGAAGAGATACTTACAAAAAATTATAGATGAGAAATTGATATAGGTCATAtc                                                      >  2:656619/1‑227 (MQ=255)

                                                                                                                                                                                                 gaCGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGa                                                             >  1:1394422/1‑220 (MQ=255)

                                                                                                                                                                                                   cGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAg                                                                                       >  1:1607314/1‑192 (MQ=255)

                                                                                                                                                                                                   cGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTtata                                        >  1:1335843/1‑239 (MQ=255)

                                                                                                                                                                                                   cGAAGGCGATG‑GAAATGAAAACCCC‑GGCGTA‑AA‑CCGCA‑AGATAAAAAGTCTTAAGCGGTTGTTTCTTTGTTTA‑ATAGCCCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTta                                          <  1:79014/237‑1 (MQ=255)

                                                                                                                                                                                                           aTT‑GAGATAAAACCCCC‑GGCGTT‑AA‑CCGCA‑AGAAAAAAAGTCTAAGGCGGTTTTTTTGTTGTTTT‑AAAAACCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGt                                 <  1:1277523/238‑1 (MQ=255)

                                                                                                                                                                                                                  aTGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCt                                                                                                                                                                                                                 >  1:19566/1‑57 (MQ=255)

                                                                                                                                                                                                                  aTGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCt                                                                                                                                                                                                                 <  2:19566/57‑1 (MQ=255)

                                                                                                                                                                                                                   taaaaaCACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAATTCTTAAGCGGATGTTTGTTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCa                         <  1:1016565/237‑1 (MQ=255)

                                                                                                                                                                                                                                       ttCGAC‑AGATAGAACGCCTAGAGGTGATGTTTCGTTGTTTT‑AAAAACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATa        <  1:874039/238‑1 (MQ=255)

                                                                                                                                                                                                                                        tccccaagaaagaaAGTCTTAAGTGGATGTTTCTTTTCTTT‑ATAACCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATa        <  1:1742078/233‑1 (MQ=255)

                                                                                                                                                                                                                                          cgcatgATAAAAAGTTTTACGCGGATGTTTCGTTGTTAT‑AAAACCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACg      <  1:1226601/234‑1 (MQ=255)

                                                                                                                                                                                                                                              aGATAGAAAGTCTAAAGGGGATTTTTCGTTGTTTT‑AAAACCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGt  <  1:949369/239‑1 (MQ=255)

CAGTTTTTCGCCAACTGACCCCAGGTGATGCGCCCACTCGCCTTAGCAACAACAATCAACACGGTGGAAGTAAAGAGATCGGCTCCGCAGACAACACAAAGAATCAGCCCCAGAGAGAAGCAAATGCCGCC‑AACCAGTTTT‑GCCATGCCGAAGGGCATTGTGCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATT‑GAGATGAAAACACC‑GGCGGT‑AA‑TCGCC‑AGATAGAAAGTCTTAAGCGGATGTTTCGTTGCTTT‑ATAGACACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGT  >  NC_007779/954548‑955017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`