Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_007779 | 990,394 | T→A | 12.3% | I129F (ATC→TTC) | pncB ← | nicotinate phosphoribosyltransferase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_007779 | 990,394 | 0 | T | A | 12.3% | 263.1 / 6.2 | 108 | I129F (ATC→TTC) | pncB | nicotinate phosphoribosyltransferase |
Reads supporting (aligned to +/- strand): ref base T (52/41); new base A (2/12); total (54/54) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.04e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 108 total aligned reads displayed.
AGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGG‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATCGGCATA > NC_007779/990169‑990631 | aGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGG‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAAGCCGGGAAGGCGGCTAATTTGCTTTTCAGCG‑TGTCGAGGGGTT‑GCGCAA‑CGTCGGCCTGCGGGGAGCGATAACGATGTACCCTTTTACTGATAACCGCCCGCaaa > 1:1748912/1‑239 (MQ=255) aGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGG‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAAAGCCGAGAAGGCGAATAATTTTCTTTTCAACG‑TGTCGAGGGCTT‑GCGCAA‑CCGCGGCCTGCGGGGAGCGATAGCGATGTACCATTTTACTGATAAACGCCCGCaaa > 1:1886465/1‑239 (MQ=255) tGCTGGTGCCCACAACCCAGGATTCCTGTTGCAGACGTTTAACGATGG‑TTTCTTGTCCTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGAGGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGAAAACCGCCAGCAAAg < 1:123304/237‑1 (MQ=255) gCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGG‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCCAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑AGTCGGCCTGCGGGGAGCGAGAGCGATGTACCCTTTTACTGATAACCGCCAGCAAAAGaa > 1:1897911/1‑239 (MQ=255) cccACAAACCAGTATTCTTGTTGCAGACGCTAAACCATGG‑TTTCTTGTACGGCGGGAGAAAAACGGCGACGGGGGCC‑AAACTCCAGAAGATGGAAGCGCGACATATCAAGCCCGGCGGTTAACGCCGAGAAGTCGACTATTTTGCTTTCCAGCG‑TGTCGAGGGCTG‑GCCCAA‑CGTCGGCCGGCGGTGAGCGATAGCGATGTACAATTTCACTGATAACCGCCAGCAAAGGAACTTCCCa < 2:350042/239‑1 (MQ=255) cccACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGG‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCa < 1:1561709/239‑1 (MQ=255) acaAACCAGGATTCCTGTTGCAGACGCTTAACGATGG‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTCCCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCagag < 1:968321/239‑1 (MQ=255) tCCTGTTGCAGACGCTTAACGATGG‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGGCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCCGCGGGGAGCGATAGCGATGGACCATTTCACTGATAACCGCCCGCAAAGGAACTTCCCAGAGGATGACTTCAc > 1:1314260/1‑238 (MQ=255) cTGTTGCAGACGCTTAACGATGG‑TTTTTTGTACTTCGCGAGAAAACCGGCGAGGGGTGCA‑AAAATCCATCAGATGGAAGCGCGACATATCAAGCCCGGCGGTTAACGCCGAGAAGTCGACTATTTTGCTTCCCAGCG‑TGTCGGGGGCTT‑GCGCAA‑CGTCGGCCTGGGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGcc < 1:1002176/239‑1 (MQ=255) cTGTTGCAGACGCTTAACGATGG‑TTTCTTGTACTTTGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCCCGAAATAGACTAATTTGCTTTCCAACG‑TGGCGAGGGCTT‑GCGCAA‑CCTCGGCCTGCGGGGCGCGGCAGCGCTGGACCCTTTCACTGAAAACAGCCAGCCAAGGAACCTCCCCAAGGATGatatctccc > 2:306272/1‑230 (MQ=255) cAGACGCTTAACGATGG‑TTTCTTGTACTTCGCGAGAAAACCGGCGACGGGTGCC‑AAAATCCATCAGAGGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACggg < 1:624661/238‑1 (MQ=255) gACGCTTAACGATGG‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGGTAAAGCCCAGAAGTCGAACAAGTTGCTTTCCAGCT‑CGTCGGGGGCTG‑TCGCCA‑ATTCCGGCTTCGGGGAGCGATAGCGGTGTACCCATTTACTGATAACCCCCACCCAAAGGACATTCCAGCGGCTGACCTCaaccaccgggcc > 2:1405482/1‑227 (MQ=255) tttAACGTGGG‑TTTTTTGTCGTGCGGGAGAAAACCGGCGAGGGGGCCC‑AAAACCCATCAGATGAAGGCGCAAAATATCAGGCCGGGGGGTTAACGCCGAGAAGTCGATTATTTTGCTTCCCGGGG‑TGTGGAGGGCTT‑GCGCAA‑CGTCGGCCGGGGGTGAGCGATAGCAATGTACCATTTCCCTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCt < 2:136080/236‑1 (MQ=255) tgaaCGATGGTTTTTTTGTCGTGCGGGAAAAAACCGGCG‑CGGGGGCCAAAAACCCAGAAGATGGAAGCGCGAAATATCAAGGCGGGGGTTAAACGCGGAAAAGGCGTCTATTTTGCTTCCCAGCG‑TGGGGAGGGCTG‑GCGAAA‑CCCCGGCCGGCGGTGAGCGAGAGCGATGTCCCATTCCACTGAAACCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTa < 2:1682939/237‑1 (MQ=255) cGATGG‑TTTCTTGTCCTTCGCGAGAAAAACGGCGCCGGGTGCA‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGTTTACCGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTCCCATTTCCCTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGa < 1:322544/239‑1 (MQ=255) aTGG‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGGTAAAGCCGAGAAGTGGACGAAATTTCTTTTCAGCG‑AGTCGAGGGCTT‑GCGCAA‑CGAAGGCCCGCGGGGAGGGGAAGAGATGTAACAATTTCCTGATAACCACCCCCAAAGGAAATTCTCCGAAGAGGACTTTCCCCCACGGGCCGCCTCAAcaaca > 2:1737781/1‑235 (MQ=255) gg‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTCACGCCCAGAAGACGACTAATTTTCTTTCCAACG‑TGGCGGGGGCTT‑GCGCCA‑AGTCGGGCTGCGGGGTGCGCTAGCGATGTACCCTTTCCCCGAATACCCCCCGCCAAGGGACTTCCCACAGGAGGTGTTCACGCCCCGGGCCGCTTTCACGAaaat > 2:159971/1‑239 (MQ=255) gg‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTTCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGGGAGCGATAGCGATGTACCATTTCACTGATAACCGCCCGCAAAAGAACTTCCCAGAGGATGACTTCACGCCCCGGGCCGCTTAAACGAata > 1:173553/1‑238 (MQ=255) gg‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGGTAAACCCGAGAAATCGACCAAATTGCTTTCCAGAG‑TGGCGGGGGGCT‑GCGCAA‑CGTCGGCCTGTGGGGAGCGCGAACGATGTACCAATTCCCTGATAAACGCCCCGCAAGGAACATCCCAGAGGGTGACATCACGCCACGGGCCGCCTaaaacaaaat > 2:698941/1‑232 (MQ=255) tCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCCA‑CGTCGGCCCGCGGTGGGCGATAGCGATGTACCCTTTCACTGATAAACGCCAGCCAAAGAACTTCCCCGAGGATGACTTCCCGCCACGGGCCGCTTAAACGAATATCCa > 1:1697358/1‑238 (MQ=255) tCTTGTACTCCGCGAGAAAACCGGCGACGGGTGCC‑AAAACCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGGCGAGGGCTT‑GCGCAA‑CGTGGGCCGGCGTGAAGAAATAGCGATGTACCATTTCACTAATAACCGCCAGCAAAGGAACTTCCCa < 1:1344723/197‑1 (MQ=255) tACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAACCCATCAGAGGGAAGCGCGACATATCAAGCCCGGCGGTTAACGCCGAGAAGTCGACTATTTTGTTTTCCAGCG‑TGTGGAGGGTTT‑GCGAAA‑CGTCGGCCTGCGGTGAGCGATGGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACggg < 1:984766/214‑1 (MQ=255) cgcgAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTTCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCCGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTa > 1:269815/1‑239 (MQ=255) cgcgAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGACGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCCCGGGCCGCTTAAACGAAAATCCAACTTGCCATTa > 1:1830250/1‑239 (MQ=255) aaccGGCGCGGGGGGCA‑AAAACCCATCAGATGGAAGCGCAACATATCAAGACCGGCGTTTAACGCCGAGAAGTCGACTAATTTGCTTTCCGGCG‑TGTCGGGGGTTT‑GCGCAA‑CGTCGGCCGGGGGTGAGCGATAGCGATTTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGa < 1:1018487/236‑1 (MQ=255) aaacgggacggggTGCA‑AAAACCCAGCGGAGGGAGGCGGAAAATATCAAGCCGGGGGGTTAACGCAGAGAAGTCGACAATTTTGC‑TTCCAGGG‑GGTTGGGGGCTTGGCGAAA‑CGTGGGCCGGGGGGGGGGAAAAGGGTTTTACCATTTCACGGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGa < 2:173553/229‑1 (MQ=255) aaaCGGCGACGGGGGCA‑AAAATCCATCAGATGGAAGGGCGAAATATCAAGACCGGGGTTTAACGCCGAGAATTCGACTAATTTCCTTTCCAGCG‑TGTCGAGGGCTG‑GCCCAA‑CTTCGCCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGa < 1:137887/239‑1 (MQ=255) cGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGGTT‑GCGCAA‑CGTCGGCCTGCGGGGAGCGATAGCGATGTACCATTTCACTGATAACCGCCCGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACgggg > 1:676376/1‑235 (MQ=255) aTCCGTGAGGTGGAAGGGCGACATACCAAGACCGGCGGTTAACGCGGGGAATTCGACTAATTTGTTTTCCAGGT‑TGTCGGGGTTTT‑GCGCAG‑CGCCGCCCGGCGGGGGCCGGTAGCGAGGTACCTTTTCACTAATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGt < 2:441138/239‑1 (MQ=255) ggAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAG‑CGTCGGCCTGCGGTGAGCAATAGCGATGTCCCATTTCCCTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGaa < 1:276442/238‑1 (MQ=255) ggAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGGTAAAGCGGaa > 1:1210408/1‑238 (MQ=255) gaaggggcaaaatatAAAGACGGGGTGTTACCGCCGAGAAGGCACCAATTTTGCTTTCCAGCG‑TGTGGGGGGCTG‑GCGAAC‑CGTCGGCCTGCGGTGGGCGAGAGCGATGTCCCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGaa < 1:1333611/227‑1 (MQ=255) cgcgACATATCAAGACCGGCGGTTAACGCCCAGAAGTCGACTAATTTTGTTTTCAGAG‑TTTCGGGGGGTT‑GCGCAA‑CGTCGGCCCGCGGGGAGCGATAGCGATGTACCACTTCACTGATAACCGCCCGCAAAAGAACTTCCCAGAGGGAGAATTCATCCCACCGGCCCCTTAAACGAAAATACAACCTGCCATTATCGCTGGACACGGGTACTTGTTCCGGGTTAAAGCGGAACTcccg > 2:1210938/1‑239 (MQ=255) cgACATATCAAGACCGGCGGTTAAAGCCGAGAAGACGACTAATTTTGTTTTCAGCG‑TGGCGGGGGCTT‑GCGCAA‑AGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTTACTGATAACCGCCCGCAAAGGAACATCCCCGAGGGGGACTTCCCGCCCCAGGGGCCCTAAAAAAAAATCCAGCGCGCCCTTTTCGTTTGCCACGGTGACCTTTTTCGGGGTAAAGAgggaacctcgga > 2:1365849/1‑229 (MQ=255) taCATATCAAGACCGGCGTTAACCGCCGAAAAGTCGACAAATTTCTTTTCCGGCG‑TGTGGAGGGCTG‑GCGCAA‑CGTCGCCCTGTGGGGGGCAATAGCGATGTCCCATTTCACGAATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 1:978955/238‑1 (MQ=255) gaaatatCAAGCCCGGGGTTTACCCGCGAGATGGCGACTATTTTGCTTCCCGGGG‑TGGCGGGGGTTT‑G‑GCAAGCGTCGGCCTGCGGGGAGCGATGGCGATTTCCCATTCCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACAGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 2:369883/236‑1 (MQ=255) gACATATCAAGCCCGGCGTTTACCGCCGAGAAGTCGACTATTTTGCTTCCCGGCG‑TGCCGGGGGTTT‑GCGCAA‑CGTGGGCCTGCGGTGAGCGATAGCGATGTCCCTTTCCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTaa < 1:3285/239‑1 (MQ=255) cATATCAAGCCGGGGGTTTAACGCCGAGAAGTCGCCTAATTTGCTTCCCGGGG‑TGTCGAGGGTTT‑GCGCAC‑CGTCGGCCGGCGGTGGGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAAc < 1:698941/238‑1 (MQ=255) tgtacaGACCGGCGTTTAGGGGCGAGAGGTGGACTAATTGGCGTGCATGCG‑TGTCGGTGGTTG‑GCGCAA‑CGGCGGCCGGCGTGGAGCGGTGGCGGTGTCCCATTCCTCGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCTCGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAg < 2:395444/234‑1 (MQ=255) cacgccgggcggTTACCGCCGCGAAGTCG‑CTAAATTGGTTTCCCGGGTTGCCGGGGCGTT‑GCACAA‑CGTCGGCCTGCGGGGAGCGATCGCGATGAACCTTTTCACGAAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTa < 2:1886465/232‑1 (MQ=255) aaggcggggggTTAACGCCGAGAGGTCGACTATTTTGCTTCCCAGCG‑TGTCGAGGGTTG‑GCGCAA‑CGTCGGCTGGGGGTGAGAGATAGGGATTTCCCATTCCCCTAATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTaa < 1:452597/230‑1 (MQ=255) gcggTTAACGGCGAGAAGTCGACTAATTTGTTTTCAGGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGGGCGATAGCAATGTCCCATTCCACGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 1:1010125/238‑1 (MQ=255) gcggTTAACGCCGAGAAGTCGACTATTTTGCTTCCCGGGG‑TGGCGGGGGTTT‑GCGAAA‑CGCGGGCCGGGGGGGAGCGATAGGGATGTACCATTCCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 2:1210408/238‑1 (MQ=255) gcggTTAACGCCGAAAGGTGGACTAATTTGCTTTCCAGCG‑TGCGGAGGTCTT‑CCGCAC‑CTTCGGCCGGCGGTGAGCGATAGCGATGTCCCATTTCGCTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 1:654038/238‑1 (MQ=255) cggTTACCGCGGAGAGGTCGACTATTTTGTTTCCCGGGG‑TGTGGGGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTCCCATTTCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTc < 1:1513348/238‑1 (MQ=255) cggTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGGGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCg > 1:191072/1‑239 (MQ=255) tAACGCCGAGAAGTCGACTAATGTGTTGTCCGGCG‑TGGCGAGGGCTT‑GCGCAA‑CGTCGGCGGGGGGTGAGCGATAGCGATGTACCATTTCACGGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCt < 1:734115/239‑1 (MQ=255) tAACGCCGAGAAGGCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCt < 1:792718/239‑1 (MQ=255) gaAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTaaagaaag > 2:680045/1‑239 (MQ=255) ttattttGTTTTCCAGGG‑TGTAGGGGGCTC‑GCGAAA‑CGGGGGCCTGCGGGGAGGGAGGGCTAGTTCCCTTTTCCCTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGTCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAggcagggca < 1:1391547/235‑1 (MQ=255) tgtgtttgccAGGG‑TGTCGAGGGTTG‑GCGAAA‑CGTCGGCCGGGGGTGAGCGATGGCGATGTACCTTTACACTAATACCCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGaa < 2:1897911/230‑1 (MQ=255) tGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAg > 1:327385/1‑238 (MQ=255) tGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAg > 2:109154/1‑238 (MQ=255) tGCTTCCCGGCG‑TGTGGAGGGCTT‑GCGCAC‑CGTCGGCCTGCGGTGGGCGATAGCGATTTCCCTTTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGc < 1:1365849/239‑1 (MQ=255) cgggttgtgGAGGGTTT‑GCGCAA‑CGTGGGCCTGGGGTGAGCGATAGGGATATACAATTCCACGTATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGat < 1:1044263/234‑1 (MQ=255) cagggggtggAGGGCTG‑GCGAAA‑CGTCGGCCGGCGGGGGGGAATAGCGATGTACCATTTCCCTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGat < 1:1009272/230‑1 (MQ=255) tCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATtcatc > 1:486922/1‑239 (MQ=255) cGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCACAAAGCCACTGATATtcatca > 2:1170504/1‑239 (MQ=255) gCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCt > 1:1587888/1‑238 (MQ=255) tt‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCa > 2:1504979/1‑239 (MQ=255) cAA‑CGGCGGCCGGGGGTGAGGCAGAGCGATGTCCTTTTTCACTGACAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGgcgc < 2:676376/239‑1 (MQ=255) cAA‑CGCGGGCCGGGGGTGAGCGATCGCGATGTCCCATGCCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGCGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGgcgc < 1:1029348/239‑1 (MQ=255) cGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAgg > 2:1314115/1‑239 (MQ=255) gCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGtgct > 1:1696261/1‑238 (MQ=255) cgggggTGAGCGTGAGCGTTGTCCCTTTGCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCa < 2:1696261/235‑1 (MQ=255) cTGCGGTGAGGGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCa < 1:615730/239‑1 (MQ=255) agcgatagcgatGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGa > 1:1310098/1‑239 (MQ=255) gcgatagcgatGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTCAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTACGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGaa > 2:215431/1‑239 (MQ=255) tagcggtGTACCATTTCACTGATAACCCCCAGCAAAGGAACTTCCCAGAGGATGACTTTACGCCACGGGCCGCTTAAACGAATATCCCGCTTGCCATTATCCTTTGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGAAGGTGCTGCATCGCCTGaa > 2:1468705/1‑235 (MQ=255) agcgatGTACCATTTCACTGATAACCGCCAGCACAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGt > 1:1079551/1‑239 (MQ=255) atGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCAc > 2:1673946/1‑239 (MQ=255) tACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGaa > 1:1316079/1‑239 (MQ=255) cATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATa > 2:1012146/1‑238 (MQ=255) aTTTCCCTAAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGc < 1:124990/239‑1 (MQ=255) tttCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCa > 1:35527/1‑239 (MQ=255) tttCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCa > 1:1041600/1‑239 (MQ=255) tttCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCACCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCa > 2:1396390/1‑239 (MQ=255) ttCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGat < 1:1930493/182‑1 (MQ=255) ttCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGat > 2:1930493/1‑182 (MQ=255) ttCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCa > 1:1347067/1‑238 (MQ=255) ttCACTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCAt < 2:191072/239‑1 (MQ=255) tcccTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATc < 1:625533/236‑1 (MQ=255) tCACGGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCAGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATc < 2:1697358/239‑1 (MQ=255) ccACTAATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATc < 1:109592/238‑1 (MQ=255) cACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAACGCCACTGATATTCATCATCATGCAGGCGAAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATCg > 1:907166/1‑239 (MQ=255) ccTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATCgg < 1:1210938/238‑1 (MQ=255) aCTGAAAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATCgg < 1:1678121/239‑1 (MQ=255) cTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTATAGAAAGGCAGGGCAGAAAGCCACTGCTATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATCGGc > 2:204672/1‑239 (MQ=255) cTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATtca > 1:962833/1‑183 (MQ=255) cTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATCGGc > 2:389813/1‑239 (MQ=255) cTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATCGGc > 1:721832/1‑239 (MQ=255) tGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTAACGAATAGCATCGGCa > 2:1154589/1‑239 (MQ=255) aTAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGaa < 1:1918579/116‑1 (MQ=255) aTAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGaa > 2:1918579/1‑116 (MQ=255) aTAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt > 1:686800/1‑139 (MQ=255) aTAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGt < 2:686800/139‑1 (MQ=255) aTAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCa < 1:488635/170‑1 (MQ=255) aTAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCa > 2:488635/1‑170 (MQ=255) aTAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATCGGCATa > 2:537268/1‑239 (MQ=255) aTAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATCGGCATa > 1:86350/1‑239 (MQ=255) | AGTTGCTGGTGCCCACAAACCAGGATTCCTGTTGCAGACGCTTAACGATGG‑TTTCTTGTACTTCGCGAGAAAAACGGCGACGGGTGCC‑AAAATCCATCAGATGGAAGCGCGACATATCAAGACCGGCGGTTAACGCCGAGAAGTCGACTAATTTGCTTTCCAGCG‑TGTCGAGGGCTT‑GCGCAA‑CGTCGGCCTGCGGTGAGCGATAGCGATGTACCATTTCACTGATAACCGCCAGCAAAGGAACTTCCCAGAGGATGACTTCACGCCACGGGCCGCTTAAACGAATATCCAGCTTGCCATTATCGTTGGACACGGTGACTTGTTCCGGGTTAAAGCGGAACTCGCGTAACCAGTTAAGATAGTCGGCCTTAAAGAAAGGCAGGGCAGAAAGCCACTGATATTCATCATCCTGCAGGCGCAGGTGCTGCATCGCCTGAACCTGTTCACGAATAGCATCGGCATA > NC_007779/990169‑990631 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |