| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,485,358 | T→C | 18.5% | A592A (GCT→GCC) | ppc → | phosphoenolpyruvate carboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 3,485,358 | 0 | T | C | 18.5% | 190.8 / 7.4 | 94 | A592A (GCT→GCC) | ppc | phosphoenolpyruvate carboxylase |
| Reads supporting (aligned to +/- strand): ref base T (7/66); new base C (13/6); total (20/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.54e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCCAACGATGTCATGACCCAGCTGCTCAATATTGACTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATGAACTGTCAGTCATCTCCTGCGATGTCTACCGCGGCTACG > NC_007779/3485121‑3485596 | cGCCAACGATGTCATGACCCAGCTGCTCAATATTGACTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑CT‑CCATTGGTTGGGGC‑GGGGCGCCCGCt > 1:241104/1‑238 (MQ=255) cGATGTCATGACCCAGCTGCTCAATATTGACTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATgcgg < 1:574479/239‑1 (MQ=255) gTCATGACCCAGCTGCTCAGTATTGACTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCgct < 2:1806243/239‑1 (MQ=255) gTCATGACCCAGCTGCTCAATATTGACTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAATCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCgct < 1:1110990/239‑1 (MQ=255) gTCATGACCCAGCTGCTCAATATTGACTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CTCCTGGTGGCGGC‑GGGGCCCCCGCCCACGGGgcgc > 2:603598/1‑238 (MQ=255) tgctAAATATTGACTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAACCCTGCGAAAAAGCGGTTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCCCCTGCTCATGCGGCGCTGCTGT‑CAC‑aa < 1:310850/236‑1 (MQ=255) aCTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑TCCGTGGGCGCGGC‑GGGGCGCCTGCCCATGCGGGGGGGCGGG‑CACAAACCCCCGGGAAGccg > 1:1129026/1‑238 (MQ=255) tATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGGTGCGGC‑GGCGCGCCCTCTCCTGCGGCGCTGCTGG‑CCC‑AACCCCCCCGGAGCC‑Tggacgg > 1:853519/1‑234 (MQ=255) tATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑GT‑CCCTTGGTCCCTGC‑CGCCGACCCTCCCCCGCGGCGCTTCCGG‑CTC‑AAACGCCCGGAAACCATGAAAg > 1:1732499/1‑239 (MQ=255) tATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑AT‑CCCTTTGGTGCGGC‑GGCGGCCCCGCCCATGCGGCGCCGGGTT‑CAC‑AACCGCCCGGAAGCC‑CGaaaag > 1:45739/1‑237 (MQ=255) tATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTAGTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCGGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAg < 1:1161062/238‑1 (MQ=255) tCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑TCATTGGGCGGGGC‑GGGGCACCCTCCCCTGCGGGGCTGCTGT‑CCC‑AACCGCCCGGAAGCC‑TGAAAgggg > 1:1425073/1‑237 (MQ=255) gTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGTTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAggcggc < 1:394518/239‑1 (MQ=255) tgcccTGATTCAGGGCAAACTGATGGTGATGTTTGGCTATTCCGACTCAGCAAAAGATGGGGGAGTAATGGCATCTTCCGGGGCGCATTATCAGGCAAAGGTTGCATAAATCAAACCCTGCGAAAAAGGGGGTATTGCGCTGCCGTTGTTCCAGGGTCGCGGCGG‑TT‑CCATTGGGCGCGGC‑GGCGACCCTGCTCTTGCGGCGTTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAggcggc < 2:699756/235‑1 (MQ=255) tGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑GT‑CCCTTGGTAGGGGC‑GGGGGACCTGCTCCTGTCGCGCAGCCGG‑TAG‑CACCGGCGGGGAGGC‑GGAAAGGGGGcc > 1:153554/1‑239 (MQ=255) tGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCGGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCCCCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAggcggc < 1:1221320/238‑1 (MQ=255) tagATTCAGGGCAAACAGGTGGGGATGATTGGCTATTCCGACTCAGAAAAAGATGCGGGAGTAAGGGCAGTTTCCTGGGCGCAATATCAGGCACAGGATGCATTAACCAAAACCTGCGAAAAGGCGGGTATTGGGCTGACGTTGTCCCACGGGCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTgcg < 2:844538/237‑1 (MQ=255) cTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGGTTT‑CCCTTGG‑GGCGGCGGGGGCCCCTGCCCCGGCGGGCCGCCTGT‑ACC‑ACCCCCCAGGAGGCC‑GGAAAGGGGGccgc > 1:1867333/1‑236 (MQ=255) cTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTgcg < 1:698714/239‑1 (MQ=255) cTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑CT‑TCAATGGTTGCGGC‑CGCGCCCCTGCCCATGCGGCGCCGCTGC‑TAC‑AACCCCCAGGGAAGC‑TGAAAGGCGGCCCgc > 1:1754514/1‑238 (MQ=255) tGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑GT‑CCACTGGTTGCGGC‑GGCGCACCTGCCCATGCGGCGCTGCTGT‑TAC‑AACCGCCACGAAGCC‑CGGAAGGCGGccgcgcc > 1:202900/1‑234 (MQ=255) gATTCGGGGGAAACAGATGGTGATGATTGGCTATTACGACTCAGCAAAAGATGCTGGATTGATGCCAGCTTCCTGGGGGCAATATCAGGCACAGAATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGGACTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGTTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGcgcg < 2:836126/239‑1 (MQ=255) aTTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTTGCGGC‑GGCGCAACAGGTCCCGTGGCCCGCGGGC‑CAC‑AACCGCCAGGCAACC‑CGAAAGGCCGcccgcccg > 1:836126/1‑238 (MQ=255) aTTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑CT‑CCATTTGTTGCGGC‑GGCGCGCCCGCCCACGCGGCGCTGCTGT‑CCC‑AACCGCCCGGGAACC‑TCAAAGGCGGCCTgccccc > 1:94561/1‑235 (MQ=255) ttCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCCCCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAgg < 1:1563871/214‑1 (MQ=255) ggCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTTGTGGCGGG‑GGCGCACCTCCCCATGCGGCGCTGGTTT‑GCC‑AACCCCCAGGAAGGC‑CGAAAAGGGGGCTGcgcgcgaacca > 1:2042084/1‑232 (MQ=255) ggCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAggcggc < 1:888588/225‑1 (MQ=255) cAACCAGATGGTGGTTTTTTGGTATTCCAACTCAGCAAAAGATGGGAGAGTGATGGCATCTTCCTGGGCGCAATGTCGGGCACGGGATGCATTAATCAACACCTGCGAAAAAGGGGGTTTGGAGCTGACGTTGTTCCCCGGTCGCGGGGT‑TT‑CCATTGGTCGGGGC‑GGCCCTCCTGCACTTGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑aa < 2:94561/238‑1 (MQ=255) cAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑aa < 1:1271415/238‑1 (MQ=255) cAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGAGGCGGGAGTGATGGCAGCTTCCTGGGCGAAATAGCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑aa < 1:1813605/238‑1 (MQ=255) aCAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAgg < 1:1956466/239‑1 (MQ=255) tggggaatgatTGGCTATTCGGATTCAGCAAAAGTGGGGGGAGTAATGGCAGCTTCCGTGGCGCAATATCAGGCACGGGATGCATTAATCAAACCGGGCGAAAAAGCGGGTATTGGCCTGCCGTTGTTCCCGGGTCGCGGGGT‑TC‑CCATGGGCCGGGGG‑GGCGCACCGGCTCAGGCGGCGCTGCTGT‑CAC‑ACCCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCg < 2:1754514/232‑1 (MQ=255) aTGGGGAGGATTGGCGATTCCGAATCAGCAAAAGATGCGGGAGTGATGCCAGTTGCCGGGGGACAATATCAGGCACAGGTTGCTTTAACAAAACCCTGGGAAAAAGCGGGTATTGGGCTACCGTTGTCCCACGGTGGCGGCGG‑TT‑CCATGGGTCGCGGG‑GGCGCCCCTGCTCAGGCGGCGCTGCTGC‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCg < 2:853519/238‑1 (MQ=255) tGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATAGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCg < 1:1297585/237‑1 (MQ=255) ttgtttGGCTATTCCGTCTCAGAAAAAGAGGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACTGGAGGCATTAGTGAAACCCTGCGAAAAAGCGGGTATGGCGCTGCCGTTGTCCCCGGGTCGCGGCGT‑TT‑CCTTGGGTCGCGGC‑GGCGCACCTGCTCCTGCGGCGCTGTTGC‑CCC‑ACCCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGCgatga‑t < 2:629531/235‑1 (MQ=255) tgatTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGCCGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCCCCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAgatga‑t < 1:1091336/238‑1 (MQ=255) tgatTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAgatga‑t < 1:334877/238‑1 (MQ=255) tgatTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑Tc < 1:255643/239‑1 (MQ=255) atTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAgatga‑t < 1:1703117/236‑1 (MQ=255) ttGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAACCCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGc < 1:119485/239‑1 (MQ=255) tGGCTTTTCCGACTCAGCAAAAGATGCGGGAGTGATGGCGGCTTCCTGGGCGCAATATCAGGCGCAGGAGGCATTAATCAAAGCCTGCGAAAAGGCGGGTATGGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCt < 1:2028405/239‑1 (MQ=255) tGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAACCCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCCCCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCt < 1:282644/239‑1 (MQ=255) tGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAACCAAACCCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCt < 1:2007955/239‑1 (MQ=255) tCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGAAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAata < 1:895319/239‑1 (MQ=255) accGACTCAGCAAAAGATGGGGGGTGGATGGAAGCTTCGTGGGGACATAATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGCCGTGGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGG‑GGCGCACCTGCCCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAata < 2:190141/238‑1 (MQ=255) attCAGCAAAAGACGCGGGAGTGTTGGGAGAGTCCGTAGGGCAAGACAAGGCCCAGGATTCCTTAATCAAACCCGACGAAAAAGGGGGTTTTGAGCTGCCGTGGGTCAACGGCCGGGGCGT‑TC‑CCATTGCCGGCGGC‑GGCGCCATTGTTACCCCGGCGCTGCTGG‑CCC‑ATCCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGCGCGAGATGA‑TCCGCTTTAAATATGGt < 2:527141/237‑1 (MQ=255) ctaaGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAACCCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTc < 1:365500/236‑1 (MQ=255) acaaaaaaaGATGGGGGGGTTGTGGAATCTTCCTGGGCGAAATATCAGCCACAGGATGCATTAATCAAACCCTGCGAAAAAGGGGGTATTGAGCTGACGTTTTTCCACGGTCGGGGCGG‑TT‑CCATTGGGCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGt < 2:2042084/232‑1 (MQ=255) cAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGGGCCCCCGGCCCTGCGGCGCGGCTGTCCCC‑ACCCGCCCGG‑AGCC‑CGCAAGGCGGCCCGCGCGTCAGCA‑CCCAACGCGGTATGA‑ACCGCCTTAAatagatgtgg > 2:607254/1‑232 (MQ=255) cAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCAATGGGCGCGGG‑CGGGCCCCCGCTCCCGCGGGGCGGCCGT‑CGC‑CAACCCCCCGCAGCC‑CGCAAGGGCGCCCGGGCGGAACCGAAACGGGGCG‑GAGGAGCCCGCTTTAAAAATgg > 2:1629458/1‑236 (MQ=255) aaaaGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGc < 1:1566197/236‑1 (MQ=255) aTGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCCCATGCGGCGCTGCTGT‑CCC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGGGATGA‑TCCGCCTTAAATATGGTCTGCCAG‑AAAACACCGTcagca > 1:1909685/1‑238 (MQ=255) gtcTTCCTGGGCGCAATATAAGGAACGGGATGCATTAGCCAAACCCGGGGAAAAAGCGGGTATTGGGGGGCCGTTTGTCCAGGGTCGCGGCGG‑TT‑CATTTGGGGGCGGC‑GGCGCACCTGCCCATGGGGGGCTGCTGT‑AAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 2:346265/236‑1 (MQ=255) ggCTTCCTGGGCGCAATATCAGGCGCAGGTTGTATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCGGGGTCGCGGCGG‑TT‑CCATTGGGCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 1:181087/237‑1 (MQ=255) acttcccTGGGCGCACTACCAGGCACGGGATGCATTAATCAAATCCTCTGAAAGACGGGGTATGGAGCTGACTTTGTTCCCCGCTCGGGGCGG‑TT‑CCTTTGGTGGCGGG‑CGCGCACCTGCTCATGGGGCGCTGCGGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGt < 2:202900/234‑1 (MQ=255) acgttCCTGGGCGAAATATCAGGCACAGGATTACTTAATCAAACCCTGCGAAAAAGGGGGTTTGGGGCGGACGTTTTCCCACGGCCGCGGCGG‑TC‑CATTTGGCCGGGGC‑GGCGCACCTGCTCATGCGGCGATGCTGT‑CCC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCTCCGTCAGCAGCCTg < 2:241104/235‑1 (MQ=255) aGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAACCCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCAGGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 1:1444058/238‑1 (MQ=255) aGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAGGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 1:1318253/238‑1 (MQ=255) aGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACTTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGTTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 1:1888769/238‑1 (MQ=255) aGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 1:749902/238‑1 (MQ=255) aGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATGGAGCTGACGTTTTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 1:1396743/238‑1 (MQ=255) aGCTTCCTGGGCGAATAATCAGCCCCAGGTTGCTTTAACCAAAACCTGCGAAAAAGCGGGTATTGGGCTGGCGTTGTTCCACGGCCGGGGCGG‑TT‑CCATTGTCCGCGGC‑GGCCTACCTGCTCATGCGGCGCTGCTGC‑AAC‑ACCCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 2:757743/238‑1 (MQ=255) aGCTTCCTGGGAGAAATACCGGGCCAAGGTTGCATTAATCAAAACCTGCGAAAAAGGGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCTTTGGTCGCGGC‑GGCGCCCCTGCTCATGCGGCGCTGCTGT‑AAC‑AGCCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 2:1046487/238‑1 (MQ=255) aGCTTCCGGGGCGCAAGATCAGGCACAGGATGCATTAATCAAACCCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 1:322388/238‑1 (MQ=255) ttctggggCGCAAGATCGGGCACCGGAGTCATTAAGCAAATCAGGCGAAACGACGGATTTGGCGCTGAGGTGGTGCCACGGCCGGGGGGG‑TT‑CCATTGGTCGGGGG‑GGCGAACCTGCTCCGGCGGTGCCGCGGT‑CGC‑AACCGTCAGGAAGCC‑TGAAAGGCTGCCTGCGCGTAACCG‑AACAGGGCGGGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAAGCACCGTCAGCAGCCTgg < 2:981915/231‑2 (MQ=255) ttCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGt < 1:32248/236‑1 (MQ=255) ttCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑c < 1:1515279/237‑1 (MQ=255) ttCCTGGGCGCAATATAGGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGGGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTGGGGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑AAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGt < 2:344463/236‑1 (MQ=255) tatCAGGCACAGGATGCATTAATCAAAGCCTGCGAAAAAGGGGGTATTGAGCTGGCGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCTCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGt < 1:808678/223‑1 (MQ=255) tatCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCGGACGTTGTTCCACGGTCGCGGCGG‑TC‑CCATGGGTCGGGGC‑GGCGCACCTGCCCAGGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGc < 1:607254/239‑1 (MQ=255) taccAGGCACAGGTTGCATTAATCAAAGCCGGCGAAAAGGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCTCCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCt < 1:1112302/181‑1 (MQ=255) gATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 1:839462/210‑1 (MQ=255) tGCATTAATCAAACCCTGCGAAAACGCGGGTATTGAGCTGACGTTGTCCCACGGTCGCGGCGT‑TC‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGcc < 1:535410/238‑1 (MQ=255) aaCCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑CT‑CCATTGGTCGCGGG‑CGGGCACCCCCCCATGCGGCGCCGGTGT‑CAC‑CACCACCCGCAAGCC‑CGCCAAGCGGCCCGCGCGGCACCC‑AACACGGGGAGGAGA‑AGCGCTTTAAAAAATATCCGCCCG‑AAATAACCCTCAACAGACTTG‑TGCCTTATTACTGGGGGATTCTGGAAGCACACCTGCGGccc > 2:1187714/1‑237 (MQ=255) gTATGGGGCTGCCGTTGTCCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGG‑GGCGCACCTGCTCATGCGGCGCGGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑ccgcc < 1:28125/226‑1 (MQ=255) aGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCCCCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 1:2178101/173‑1 (MQ=255) gCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTgg < 1:1303883/238‑1 (MQ=255) tgccGTTGTCCCCCGGTCGCGGCGG‑TC‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCg < 1:619856/235‑1 (MQ=255) tGACTTTGTTCCACGGTCGGGGCGG‑TT‑CCATTGGTCGCGGC‑GCCGCACCTGCCCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGt < 1:1259725/239‑1 (MQ=255) tGACGTTGTCCCGCGGTCGGGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑AAA‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGGGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGt < 1:1653373/239‑1 (MQ=255) ggACGTTGTCCCCCGGTCGCGGCGG‑TC‑CCATTGGTCGCGGC‑GGCGCACCTCGTCAGGCGCCGCTGCTGT‑CAA‑ACCCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGt < 1:935583/238‑1 (MQ=255) ggggttgtCCCCGGTCGGGGGGG‑TTCCCATGGGGCGGGGC‑GGGGCCCTGGCCCAGGGGGGGCTGTTGT‑CAC‑AACCGCAAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCACCCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGt < 2:1909685/231‑1 (MQ=255) aCGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTTGGTGCGGC‑GGCGCCACCCCTCCTGCGGGGCGGCCGT‑CAC‑AAACCCCCGGGAGCC‑CGGAAGGCGGCCCGCGCGGAACCG‑AAAAAGGCGGGGGGG‑ACCGCTTTAAATATTGGCTGGCAGAAAAACACC‑TCAGCAACCTGTGCGTTTATTCCCGGGGCGA‑TATGGGAGCCAACCACCCGCCACCCGCCGGGGCCGACagaaggcggcggtc > 2:1763407/1‑228 (MQ=255) ttgttCCCCGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCCCCTGCTCAGGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCAt < 1:706564/239‑1 (MQ=255) ttgttCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCAt < 1:1629458/239‑1 (MQ=255) tgtcCCCCGGTCGCGGCGG‑TT‑CCATGGGTCGCGGC‑GGCGCCCCTGCTCATGCGGCGCTGCTGC‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCAt < 1:1763407/238‑1 (MQ=255) ttCCACGGCCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTg < 1:462241/162‑1 (MQ=255) ggTCGGGGCGT‑TT‑CCTTTGGCCGCGGC‑GGCGCCCTTGCCCATGCGGCGCTGCTGT‑CCC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATg < 1:466568/238‑1 (MQ=255) tggcgccgG‑TC‑CCATGGGTGGCGGC‑GGCGCACGTGCTAATGCGGCGCTCCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATGaa < 1:285654/236‑1 (MQ=255) tCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCt < 1:581925/116‑1 (MQ=255) tggcggc‑ggccCCCCTGCGCGTGGGGCGCTCTTGT‑CCC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATGAACTGTCAGTCATCTCCTGc < 1:97768/236‑1 (MQ=255) cgcgGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AATTCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATGAACTGTCAGTCATCTCCTGCGa > 1:433420/1‑239 (MQ=255) cgcACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGACCGGGCGTCGCATTATGGCTGAACTGTCAGTCATCCCCTGCGATGTCCAc > 2:1178892/1‑238 (MQ=255) gcctcTGCTCATGCGGCGCGCCTGA‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGGGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGGGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATGAACTGTCAGTCATCTCCTGCGATGTCTACcg < 1:697783/235‑1 (MQ=255) gccccTGCTCATGCGGCGCGGCGGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATGAACTGTCAGTCATCTCCTGCGATGTCTACcg < 1:1901216/236‑1 (MQ=255) tCAGGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATGAACTGTCAGTCATCTCCTGCGATGTCTACCGCGGCtacg < 1:917052/239‑1 (MQ=255) | CGCCAACGATGTCATGACCCAGCTGCTCAATATTGACTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGG‑TT‑CCATTGGTCGCGGC‑GGCGCACCTGCTCATGCGGCGCTGCTGT‑CAC‑AACCGCCAGGAAGCC‑TGAAAGGCGGCCTGCGCGTAACCG‑AACAGGGCGAGATGA‑TCCGCTTTAAATATGGTCTGCCAG‑AAATCACCGTCAGCAGCCTGT‑CGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCA‑CCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATGAACTGTCAGTCATCTCCTGCGATGTCTACCGCGGCTACG > NC_007779/3485121‑3485596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |