| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,538,290 | T→G | 23.1% | Y219S (TAC→TCC) | rhaS ← | HTH‑type transcriptional activator RhaS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 3,538,290 | 0 | T | G | 23.1% | 289.8 / 24.3 | 145 | Y219S (TAC→TCC) | rhaS | HTH‑type transcriptional activator RhaS |
| Reads supporting (aligned to +/- strand): ref base T (30/78); new base G (34/2); total (65/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.65e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 147 total aligned reads displayed.
CGAAGTTGATTATTCGCAATATGGCGTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGCATAAACAAGATCTCGCGACTGGCGGTCGAGGGTA > NC_007779/3538058‑3538527 | cGAAGTTGATTATTCGCAATATGGCGTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑t < 1:101601/239‑1 (MQ=255) gATTATTCGCAATATGGCGTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGt < 1:468281/239‑1 (MQ=255) attattCGCAATATGGCGTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCCGGTATCGT‑TGTGGCggc > 1:2067801/1‑237 (MQ=255) ttattCGCAATATGGCGTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCa < 1:1242892/239‑1 (MQ=255) tCGCAATATGGCGTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGa > 1:957899/1‑228 (MQ=255) cGCAATATGGCGTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTTAGGTATCGC‑GCGGGCGTCaagac > 1:1946990/1‑234 (MQ=255) tatGGCGTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGCTCCGGAATCGG‑TGACGGGTCAGTGCCGtttt > 2:1248150/1‑238 (MQ=255) cGTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATTGC‑CGAGGCGTCAGTCCCGGTTgctgct > 1:116958/1‑239 (MQ=255) gTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCATCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATAGC‑GGAAGGGCCAGGTCCGTTtgcggcat > 2:1940340/1‑237 (MQ=255) tACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGACAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTTCGGGCTCGC‑TGTGGGGGCAGGTCCGTTTGCCGCCTa > 2:1580167/1‑239 (MQ=255) aCAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTaa < 2:855417/239‑1 (MQ=255) cAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAg < 1:845946/239‑1 (MQ=255) aaaTACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCGCAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGc < 2:99725/239‑1 (MQ=255) aTACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTg < 1:1265790/239‑1 (MQ=255) aTACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTg < 1:1925669/239‑1 (MQ=255) tACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGc < 1:1765612/239‑1 (MQ=255) cGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTTCGGGAACGCGTGGGGGGGC‑GTCCCGTTTTTTGCTTAAGCTGCCg > 1:1405/1‑239 (MQ=255) cGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCg < 2:1299392/239‑1 (MQ=255) tGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGAt < 2:1486683/238‑1 (MQ=255) tGAGAAGATGCGCGTTATTGCAGAAAGCGATCCCGACCCTGGCGAATATCACGCGGTGACCAGTGAAACTCTCGGCGAAAAGGCGTCGAAAAGTGGTGAATGTCGCTGAAGCCACAGCGATAGGCGATGTCAGTAACGCTCGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAATCTGCCGAt < 2:1838029/238‑1 (MQ=255) agaagaTTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTGTCGC‑CGAGGCGGCAGGTCCGTTTGGTTGTTAAGCTGCCGATGTa > 2:235647/1‑239 (MQ=255) agaagaTTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGCTCAGGTATCGC‑TGAGGGGTCGGTCCCGTCTGTTGCCTAAGGCGCCGCTGtg > 2:119599/1‑238 (MQ=255) aagaTTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGTCAGTCCCGGTTGCTGCTTAAGGTGCCGGTGTTGc > 1:1891145/1‑239 (MQ=255) agaTTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGc < 1:1606464/238‑1 (MQ=255) agaTTCCCTTTATGTCAGAAAGCCAGCCCGGCCCTGGCGAATATCGCGCGGTGGCCTGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTAGCGCTGAAGCCAGAGCGGTAAGCGATGTCTGTAACGCTGGCCACGCTGTGGCGTAGCGGATATCGGGCCTTCATCAGTCGCGGGGGGTTCGTGGATTGC‑CGAAGCGCCAGTCCCGTGTTCTGCTTAATCTGCCGATGTAGca < 2:1682660/239‑2 (MQ=255) gTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGttt < 1:1137803/207‑1 (MQ=255) aTTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCTGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAGTCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGaa < 2:2152000/239‑1 (MQ=255) gCATAAAGCCATCCCGTCCCTGGCGAATATCGCGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAAACCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAaga < 1:1088150/239‑1 (MQ=255) gCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAaga < 1:1236661/239‑1 (MQ=255) aGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTg < 1:1555156/228‑1 (MQ=255) tCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAg > 1:50081/1‑200 (MQ=255) tCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑GTAGGCGTCAGTGCCGGTTGCTGGTTTAGCTGCCGCTGTAGCGGGCGCGCTGAAAGAGaaaa > 2:1555156/1‑228 (MQ=255) tCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCCC‑TGAGGCGGCAGTCCCGTTTGCTGCTTAAGCTTCCGATGTAGCGTACCCAGTGAAAGAGAAAATTGATCCGcc > 1:1991522/1‑238 (MQ=255) cTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAAGGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACgg < 1:537254/239‑1 (MQ=255) ggCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTTAGGTATCGC‑TGAGGCGGCAGTCCCGTTTGCTGCTTAAGCAGCCGATGGAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑c > 1:2062510/1‑238 (MQ=255) ggCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGa > 1:716268/1‑164 (MQ=255) gCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACg < 1:585485/207‑1 (MQ=255) cGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CAt < 1:452353/238‑1 (MQ=255) cGAATATCACGCGGTGACAAGGTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGAGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CAt < 2:1826089/238‑1 (MQ=255) caaTATCACGCGGGTGCCGTTTAAACCTTCGGCGAAAAGGCGTGAAAAAGTGGTTACTGTCGCTGAACCCACGGCGATGGGCGCTGTCAGTAACGCGGGCCTCGCTGGGGCGTAGCCGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCTTAAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCTTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATcc < 2:1865895/238‑1 (MQ=255) tGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGGGTCAGTCCCGGTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CCACTCa > 1:1689022/1‑238 (MQ=255) gACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGGCAGTCCCGTTTGCTGCTTAAGCTGGCGGTGTAGCGTACGCAGTGGAAGAGAAAATTGATCCGCCACCG‑CATCCCacatccccccaa > 2:374778/1‑227 (MQ=255) aCCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGGACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCg > 1:632939/1‑239 (MQ=255) caaGTTAAACTCTCGGCGAAAAAGCGTGTAAAAGTGGTTACTGTCCCTAAATCCACGGCGATGGGCGATGTCAGTACCGCGGGCCTCGTTTTGGCGTAGCAGATGTCGGGTTTTCACCAGGCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAAAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCgg < 2:2067801/237‑1 (MQ=255) aaCTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCGGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTGGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATg < 1:483051/239‑1 (MQ=255) ctctCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑GCAGGGGTCAGTCCCCTTTTCTGCTTAAGCTGCCCGAGTAGCGTACGCCGTGAAAGGGAAAATTGATCCGCCACGG‑CATCCCAATT‑CCCCCCATCGG‑CAAAATgg > 2:1530223/1‑238 (MQ=255) ctctCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGCTCAGGTATACC‑TGAGGCGTCAGGCCCGTTTGGGGCTTAAACTTGCCATGTTGGGCACCGCGGGGAAGAGAAAAATGAACCCGCACGG‑CATCCCAATT‑CACCCCCACGGCCAAAATgg > 2:1985015/1‑239 (MQ=255) tcGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGGGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGtcct > 1:762546/1‑239 (MQ=255) tcGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGGCAGTCCCGGTTGCTGCTTTAGCTGCCGATGTAGCGTACGCAGGGAAAGAGAAAATTGATCCCCCACGG‑CATCCCAATT‑CAACTCATCGG‑CAAAATGGtcc > 1:663247/1‑238 (MQ=255) ggCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGCTGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTTAGCTGCCGATGTAGCGTTAGCAGTGAAAGAGAAAATTGATCCGCCACCG‑CAGCCCAATT‑CACCCCATCGG‑CAAAAAGGgcctc > 1:1693976/1‑238 (MQ=255) ggCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGATTAGGTAACGC‑TGAGGCGTCAGTACCGTTTGCTGCTTAAGCTGCCGGTGTAGCGTACGCAGGGAAAGAGAAAATTGATCCGCCACGG‑CATCCCCATT‑CACCTCATCGG‑CAAAAAGGtcctcc > 1:196716/1‑239 (MQ=255) tgCGTCGAAAAGTGGTTACTGACGCTGAACCAACGGCGATAGGCGATGTCAGTAACGCGGGCTGCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCGGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTGGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAgccaggc < 2:632939/238‑1 (MQ=255) tCGAAAAGTGGGTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGGAGCGGCAGTTCCGTTTGCTGGTTTAGATGCCGGAGTAGCGGACGCAGTGAAAGAGAAAAATGATCCGCCACGG‑GATTCCAATT‑CACCTCATCCG‑CAAAATAGAACCccagcccagcccaa > 2:336595/1‑231 (MQ=255) cGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGaa < 1:1038927/239‑1 (MQ=255) cggaGTGTTTACTGCCGCTGAACCCAAAGGGATAGGCGATGTCGGTACCGCTGGCCTCGCTGTGGCGTGGCAGATGTCGGGCTTTCATCAGTCGCAGGCGTTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGc < 2:566394/236‑1 (MQ=255) tGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGc < 1:333513/131‑1 (MQ=255) tCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGAc > 1:566394/1‑235 (MQ=255) gCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATg < 1:717140/239‑1 (MQ=255) gAACCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATgcgc < 1:1555132/239‑1 (MQ=255) caGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGGTGTAGCGTACGCAGGGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCCGCCCGGCCAGAAGCAAATTGAGACGTGATGCGCTGtttt > 1:2068660/1‑238 (MQ=255) caGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGGCAGTTCCGTTTGCTTCTTAAGCTGCCGATGTAGCGTACGCAGCGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGCAGCAAGTTGAGACGGGATGCGCTGtttt > 1:1925106/1‑238 (MQ=255) aGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATAGC‑TGATGCGTTAGTCCCGTTTTGTGCATAAGCTTACGATGTAGCGTATGCACTGCAAACGAAAATTTATTCGTCCCGG‑CACCCCCATTACCCCTC‑TTGG‑CCAAAAGGTCATCCCCCACGGCCAAAAGCCAGCTCAGATGGCAAGCGCTGctttt > 2:1241421/1‑237 (MQ=255) tAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCCGGGATCGC‑TGAGGCCTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGt > 1:1189919/1‑238 (MQ=255) tAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAAGCGTCCGTCCCCCTTTCTGCTTAAGCTGCCGATGTAGCGTACGAAGGGAAAGAGAAAATTGATTCGCCCCGG‑CCTCCCCATT‑CACCTCACCGG‑CAAAAATGTCCCCCCTCCAGTCCACAAACAAATTCACACGCGTGTCTCTGTTTTCCAGGtt > 2:1098065/1‑239 (MQ=255) gCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGc < 1:1105703/204‑1 (MQ=255) gCGATGTCAGTAACGCGGGCCTGGCTGTGGCGTGGCAGATGGCGGGCTTTGATCGGTCGCGGGCGGTTAAGGTAGCGC‑TGAGGCGTCAGTCACGTTTGCTGCTAAAGCTGCGGATGTAGCGTACGCAGTGAAAGAGAAAATTCATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGc < 2:2185587/204‑1 (MQ=255) tGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑CGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGGTGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGAAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGc > 1:1352067/1‑239 (MQ=255) tGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGCGGCGTCCGTCCCGGTTGCTGCTTAAGCTGCCGAAGTAGCGTAAGCCGAGGAAGAGAAAATTGATCCGCCCCGG‑CCTCCCAATT‑CCCCTCATCCG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGGTTTCCAGGTTCTccct > 2:2093874/1‑236 (MQ=255) gTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTTATCCGCCACGG‑CAt > 2:115081/1‑152 (MQ=255) gTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CAt < 1:115081/152‑1 (MQ=255) aGTAACGTGGGCCTGGCTGTGGCGTAGCATATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATgcgc < 1:1558376/215‑1 (MQ=255) tAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGGGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCCCATCGG‑CACAAATGTCCTCCCACCATGCCCGAAGCAAGTTgaagc > 1:2185587/1‑201 (MQ=255) tAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGCTCAGGGATCGC‑CGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGAGTACGCAGTGGAAGAGAAAATTGATCCGCCCCCG‑CATCCCAATT‑CCCCCCCTCGG‑CAAAAAGGTCCCCCAGCCAGGCCAGAAGAAAGTTTAGACGCGATGCGCTGTTTTCCCGGGTCTCCTGCaaaat > 2:438291/1‑236 (MQ=255) aaggcgggCCTAGCTGTGGTGTAGCAGATGGCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAATGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAAc < 1:1627256/230‑1 (MQ=255) cGCTGGCCTCGCTGTAGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGGTGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAgg < 1:1517186/221‑1 (MQ=255) cTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTAAGGTAACGC‑TGAAGCGCCAGTCCCGTTTGCTGCTTAAGCTGCCGGTGTAGCGGACg > 2:686000/1‑110 (MQ=255) tGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTa < 1:411176/239‑1 (MQ=255) gcggtCGGTGTGGCGTGGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGGGAAAGAGAAAATTCATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATACGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTa < 2:461043/234‑1 (MQ=255) gCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTTAGGGATCGC‑CGAGGCGGCAGTCCCGTTTGCTGCTTTAGCTGCCGATGTAACGTACGCCGTGAAAGAGAAAAATGATCCGCCCCGG‑CATCCCAAAT‑CACCTCATCGG‑CAAAAAAGTCCTCCCGCCCGGCCAAAAACAAATTGAGACGGGGATCGCTGTTTTCCAGGGTCTCCTGCAAACTGCGTTTaag > 2:1138714/1‑237 (MQ=255) gCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGGTCTCCTGCAAAATGCtttt > 1:848780/1‑236 (MQ=255) cccTCGCTGGGGCTTAGCGGATGTCGGGCTTTCATCAGTCGCGGGCGGTTCAGGTACCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTCCGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCa < 2:663432/213‑1 (MQ=255) cGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATGGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACgcagc < 1:1733142/239‑1 (MQ=255) cTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGTCAGTCCCCTTTGCTGCTTAAGCTGCCGATGGAGCGTACGCCGTGAAAGAGAAAATTGATCCGCCCCGGCCTTCCCATTT‑CA‑CTCATCGG‑CAAAATGGTGCTCCAACCAGGCCAGAAGGAAGTTGAGACGTGATGCGCTGTTTTTCCGGTTCTCCTGCAAACTGCTTTTTCCCAGCaa > 2:1054488/1‑239 (MQ=255) ggCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAagag < 1:600540/238‑1 (MQ=255) ggCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGGACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGGGATGCGCTGTTTTCCAGGTTCTCCTg > 1:663432/1‑214 (MQ=255) tAGCGGATGTCGTGTTTTCATCTGTCGTGGGCGGTTCAGGTATCGC‑TGAGGAGTCAGTCCTGTTTGCTGTTTAAGCTGCCGATGTAGCTTACGCGGTGAAAGAGAAAAGTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTa < 2:910199/239‑1 (MQ=255) tAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTa > 1:795480/1‑239 (MQ=255) tAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCCC‑TGAGGCGTCAGTCCCGCTTGCTGCTTAAGATGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGCAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAaga > 1:461043/1‑233 (MQ=255) atcAGATGGCGGGTTTACATCAGGCGCGGGCGGTTCAGGTATCGC‑TGAGGCGTCAGCCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTaa < 2:966353/237‑1 (MQ=255) aGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATGGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTaa < 1:888286/239‑1 (MQ=255) tGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGc < 1:374778/237‑1 (MQ=255) tGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGGATCGC‑TGAGGCGTCCGTCCCGGTTGCTGCCTAAGCTGGCGGTGTAGCGTACGCCGTGAAAGAGAAAATTGATCCGCCCAGG‑CCTCCCAATT‑CACCTCATCGG‑CCAAAAGGGCCTCCCACCAGGCCAAAAGCAAGTTTCGACGTGATGCGCTGTTTTCCAAGTTTTCCCGCAACACGCTTTTACGCAGCAAGAGCAAGAATTGCAt > 2:1868084/1‑239 (MQ=255) tGTCGGGCTTGCATCAGTCCGAGGCGTTGCAGGTTTCGC‑GAGGGCGTCAGTCCCGTTTGTGGCTTAAGCTGCCGATGTAGCGTCCGCAGTGAAAGAGAAAATGGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGc < 2:82896/237‑1 (MQ=255) gTCGGGCTTTCATCAGTCGCAGGCGGTTCCGGGATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGGTGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGCATa > 1:1020556/1‑239 (MQ=255) cAGGCGTTGCAGGTATCGT‑GGGGGCGCCGTTCCGGTTTGCTGCTTAAGCTGCCGAGGTGGCGTACGCAGTGAAAGAGAAAATTGAGCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGCATAAACAAGATCTCGCGACTg < 2:1189919/238‑1 (MQ=255) ggTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCGGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGCATAAACAAGATCTCGCGACTGGCGGTc < 1:2051953/239‑1 (MQ=255) gTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTCCCGATGTAGCGTACCCAGTGAAAGAGAAAATTGTGCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGCATAAACAAGATCTCGCGACTGGCGGTc < 2:83801/238‑1 (MQ=255) ttCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGCATAAACAAGATCTCGCGACTGGCGGTCg < 1:2143442/238‑1 (MQ=255) tATCGC‑TGGGGCGTAAGTCCCTTTGGCTGCTAAAGCTGCCGATGTAGCGTACGAAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGCATAAACAAGATCTCGCGACTGGCGGTCGAGGGTa < 2:1687481/238‑1 (MQ=255) tATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGCATAAACAAGATCTCGCGACTGGCGGTCGAGGGt < 1:1868084/237‑1 (MQ=255) | CGAAGTTGATTATTCGCAATATGGCGTACAAATACGTTGAGAAGATTCGCGTTATTGCAGAAAGCCATCCCGTCCCTGGCGAATATCACGCGGTGACCAGTTAAACTCTCGGCGAAAAAGCGTCGAAAAGTGGTTACTGTCGCTGAATCCACAGCGATAGGCGATGTCAGTAACGCTGGCCTCGCTGTGGCGTAGCAGATGTCGGGCTTTCATCAGTCGCAGGCGGTTCAGGTATCGC‑TGAGGCGTCAGTCCCGTTTGCTGCTTAAGCTGCCGATGTAGCGTACGCAGTGAAAGAGAAAATTGATCCGCCACGG‑CATCCCAATT‑CACCTCATCGG‑CAAAATGGTCCTCCAGCCAGGCCAGAAGCAAGTTGAGACGTGATGCGCTGTTTTCCAGGTTCTCCTGCAAACTGCTTTTACGCAGCAAGAGCAGTAATTGCATAAACAAGATCTCGCGACTGGCGGTCGAGGGTA > NC_007779/3538058‑3538527 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |