Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,609,538 A→C 17.1% M206R (ATG→AGG)  fre ← NAD(P)H‑flavin reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077793,609,5380AC17.1% 255.1 / 8.3 99M206R (ATG→AGG) freNAD(P)H‑flavin reductase
Reads supporting (aligned to +/- strand):  ref base A (35/42);  new base C (16/3);  total (52/47)
Fisher's exact test for biased strand distribution p-value = 3.90e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATC  >  NC_007779/3609304‑3609758
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                               
gCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑ATATCTCAGATAAATTCAAACGCATCGC‑CCAAAA‑GGCGATCTTCCCCCG‑CAATACGCCCACTGCAAAACAAAACGCGGG‑CAATTT‑TTGCCCtctc                                                                                                                                                                                                                             >  1:1676402/1‑239 (MQ=39)
 ccTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑TTATCTCCGATAAATGCAAACGCATCGC‑CAAAAA‑GGCGATCTTCCCGCG‑CATTACCCTCACTGCAAAACAAAACGCGGG‑CAATTT‑TCGCCATCCCa                                                                                                                                                                                                                            >  1:798986/1‑239 (MQ=39)
 ccTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑ATTTCCCACATAAATTCCAACCCATCGC‑CAAACA‑GGCGGTCTTCCCGCC‑CCTTACGCTCACTGCCAAACAGAACCCGGG‑CAAATT‑TCTCCCTCCCa                                                                                                                                                                                                                            >  2:1252031/1‑239 (MQ=38)
  cTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCa                                                                                                                                                                                                                            <  1:188388/238‑1 (MQ=255)
         tCGGATTATTTGTAGGCACGATAAGACGGAACAGCGTCGCATCGGGCATGGTTTGCCAGTTACGTCATAGATCTAAATGCCACTGAATACCAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAGCAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTc                                                                                                                                                                                                                     <  2:430685/238‑1 (MQ=255)
         tCGGATTATTTGTAGGCACGATAAGACGCGACAGCGTCGAATCGGGCATGGTTTGCCGGATACGTCATAGATCTAAATGCCCCTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTc                                                                                                                                                                                                                     <  2:2056160/238‑1 (MQ=255)
         tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTc                                                                                                                                                                                                                     <  2:1049744/238‑1 (MQ=255)
         tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTc                                                                                                                                                                                                                     <  1:399183/238‑1 (MQ=255)
         tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTc                                                                                                                                                                                                                     <  1:1334017/238‑1 (MQ=255)
         tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTc                                                                                                                                                                                                                     <  1:1239514/238‑1 (MQ=255)
         tCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTc                                                                                                                                                                                                                     <  1:1716509/238‑1 (MQ=255)
          cGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑TTTTTTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGGGATCTTCCCCCG‑CCTTACGCCCACTGCAAAAAAAAACGCGGG‑CAATTT‑TCGCCCTCTCAAAACGTCCg                                                                                                                                                                                                                   >  1:63423/1‑239 (MQ=255)
          cGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑TTTTCTCAGATAAATTCAAACACATCGCACAAAC‑‑GGCGATCTTTCCCCGCCATTAC‑CCCACTTCAAAAAAGCACCCGGG‑CAATTT‑TTCCCCTCTCCCAAAGTcc                                                                                                                                                                                                                    >  2:360288/1‑238 (MQ=255)
           ggACTTTTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGAATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCgg                                                                                                                                                                                                                  <  1:306613/239‑1 (MQ=255)
           ggACTATTTGTAGGCACGATAAGACGCGACGGCGTCGCATCGGGCATGGTTTGCCAGATCCGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCgg                                                                                                                                                                                                                  <  1:1568970/239‑1 (MQ=255)
             cttttttGTAGGACCGAAAAGACGGGAAAGGTGCGCTGCGGGCATGGTTTGCCAGATACGTCATAGCTCTAAATGCCACTGAATAACATTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGc                                                                                                                                                                                                                 <  2:798986/234‑1 (MQ=255)
             agtATTTGTGGGCCCGTAAGGACGCGACAGCGTCGCATCGGGAATGGTTTGCCAGATACGTCTTAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCa                                                                                                                                                                                                                <  2:566449/237‑1 (MQ=255)
             aCTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGGTACGTCATAGATCTAAAGGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGc                                                                                                                                                                                                                 <  1:581024/238‑1 (MQ=255)
              cTATTTTTGGGCAGGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCa                                                                                                                                                                                                                <  2:800116/238‑1 (MQ=255)
              cTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCa                                                                                                                                                                                                                <  1:1440422/238‑1 (MQ=255)
              cTATTTGTAGGAACGTAAAAACGCGACAGAGGCACATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATATCAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCa                                                                                                                                                                                                                <  2:63423/238‑1 (MQ=255)
              cTATTTGAAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTGCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCaa                                                                                                                                                                                                               <  1:1259327/239‑1 (MQ=255)
                 tttGTGGGAACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCGGATACGTCATAGCTCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAatat                                                                                                                                                                                                            <  2:1579721/239‑1 (MQ=255)
                 tttGTAGGCACGATAAGACGCGACGGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAatat                                                                                                                                                                                                            <  1:2133/239‑1 (MQ=255)
                 tttGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAatat                                                                                                                                                                                                            <  1:1961416/239‑1 (MQ=255)
                   gttAGGCACGAAAAAACGCGAGAGCTTGCAATCGGGAATGTTTTGCCAGATACGTCATAGACCTAAATGCCCCTGAAGAACATTTTAGTGGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGA‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAg                                                                                                                                                                                                          <  2:474114/237‑1 (MQ=255)
                       ggCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑TTTTTTCTGATAAATGCAAAACCACCGC‑CAAAAA‑GGCGGACTTCTCTCC‑CAATACGCTTACTGCACAACACAACGCGGG‑CAATTT‑TTGCCCTCTCCAAACGACCTGCACTACAGata                                                                                                                                                                                                       >  2:1259327/1‑238 (MQ=255)
                         cACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGCATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGAGAAATTGCAACACATACA‑AGACCA‑ATCGAACTTCCTGCG‑CCCTACACTTCCCGCAAAACCAATACCCGG‑CAAATT‑TCCCCCGCGCCAAAAGGCCGGCAATATAgcatac                                                                                                                                                                                                     >  2:1496725/1‑233 (MQ=255)
                         cACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGatat                                                                                                                                                                                                      <  1:617282/237‑1 (MQ=255)
                         cACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGatat                                                                                                                                                                                                      <  1:1252031/237‑1 (MQ=255)
                         cACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑TTTTCTCCGATAAATACAAACACCTCGC‑CCAACACGGCG‑TCCTCTCGCC‑CAATAACCTCAACGCAAAAAAAAACCCGGG‑GAACTT‑TTCCCAACTCAAAACACCCGGCAAAATAAACATCa                                                                                                                                                                                                    >  2:352240/1‑239 (MQ=255)
                           catgaggtggcgACAGCGTTGCAGCGGGCATGGTTTGCAGGATACGGCAAAGATTTAAATGCCACTGAATAACATTTTAGTTGCCGTCCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATg                                                                                                                                                                                                  <  2:1477763/230‑1 (MQ=255)
                           cGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑TTATTTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCCCACTGCAAAACAAATCGCGGG‑GAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGatat                                                                                                                                                                                                      >  1:566449/1‑235 (MQ=255)
                           cGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑TTATTTCTGATAAATTCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAAATAGCGGG‑GAAATT‑TTGCCCTCTCAAAACCTCCGGCAATATAGATATCAt                                                                                                                                                                                                   >  1:234238/1‑238 (MQ=255)
                             aTAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑TTATCTCAGATAAATGCAAACGCACCGC‑CAAACA‑AGCGATCTTCCCGCG‑CATTACGCTCACTCCAAAACACAACGCGGG‑CAAATT‑TTCCCCTCTCAAAAAGTCCCGCAATATAGATATCATGc                                                                                                                                                                                                 >  1:376587/1‑238 (MQ=255)
                              aaaGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGctc                                                                                                                                                                                               <  1:1509814/238‑1 (MQ=255)
                                aGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACATTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTg                                                                                                                                                                                             <  1:463445/239‑1 (MQ=255)
                                   cgcgACAGCGTCGCACCGGGTATGGTTTGCCAGTTACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGc                                                                                                                                                                                            <  1:941187/237‑1 (MQ=255)
                                      gACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑TTATTTCAGATAAATGTAAACACATCGC‑CAAAAA‑AGCGGTCTTCCCCCG‑CATTAAGCTCACTTCCAAACAGAACCCGGG‑CAATTT‑TCGCCCCCCCAAAAAGCCCGGACAAATAAATAACATGCCCTCCCAGC‑g                                                                                                                                                                                      >  2:628824/1‑239 (MQ=255)
                                              cGCAGCGGGCAGGGTTTGCAAGATACGTCATAGATCTAAATGCCACTAAATAACAGTTTAGTCGCCGTTCTCCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGa                                                                                                                                                                              <  1:396096/239‑1 (MQ=255)
                                                 aTCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATc                                                                                                                                                                            <  1:1003424/238‑1 (MQ=255)
                                                      gCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCaa                                                                                                                                                                                                               <  1:1754294/199‑1 (MQ=255)
                                                               gCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑ATATCTCAGATAAATGCAAACGCCTCGC‑CAAACC‑AGCGATCTTCCCGCG‑CATTACCCTCCCTGCAAAACAGAACGCGGG‑CAATTT‑TCGCCATCTCAAAAAGTCCGGCAATATAGATATTATGCTCTGCCAGC‑GTACCGGGATCCTGC‑AAA‑Accgccct                                                                                                                                                           >  1:201988/1‑237 (MQ=255)
                                                                ccAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACCCATCGC‑CAAACA‑GGCGATCTTCCCCCG‑CATTACGCTCACTGCAAAACAAATCGCGGG‑CAATTT‑TCGCCACCTCAAAACGTCCCGCAAAAAACAAATTATGCCCTGCCAAC‑GTACCCGGATCCTCC‑AAA‑ACCCCCGtt                                                                                                                                                          >  2:1159386/1‑239 (MQ=255)
                                                                ccAGATACGTCATAGATCTAAAGGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGc                                                                                                                                                                                                                 <  1:1756496/187‑1 (MQ=255)
                                                                          cATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCCTCGC‑CAAAAA‑GGCGATCTTTCCGCG‑CATTACGCTCACCGCCAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGGCCGGCAATATAGAGTTCATg                                                                                                                                                                                                  >  1:1903108/1‑192 (MQ=255)
                                                                               aTCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGa                                                                                                                                                                              <  1:1801609/206‑1 (MQ=255)
                                                                                  tAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑TTATTTCAGATAAATGCAAACGCCTCGC‑CAAACA‑GGCGATCTTCCCCCG‑CATTTCGCTCACTGCAAAAAAGATCGCGGG‑CAATTT‑TCGCCCTCTCAAAACCTCCCGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGGGCCAGAACg                                                                                                                                         >  1:1705532/1‑238 (MQ=255)
                                                                                    aaTGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑TTAAATCCATGAAAAGCCAACCCATCAC‑CCAACA‑AGCGGTATTCCCCCG‑ACTTACGCCCACCTCAAAAACAATCCTCGT‑CCATTT‑TTGCCTCCCCAAAACCCCCGGCAAATAAAAAATCACACCCTTCCCCC‑GTACCCCGACCCCGC‑AAA‑ACCCCCGCTAACACGGTGcccacccccc                                                                                                                                       >  2:1551175/1‑230 (MQ=255)
                                                                                         cACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑ATTACTCAGAAAAAAGCAAAACCATCGC‑CAAACA‑GGCGATCTTTCCCCC‑CATTACACCCACTGCAAAAAAGATCCCCGG‑CAATTT‑TTTCCCCCTCCAAAAGTCCCGCAATATAGATAACCTACTCTTCACGC‑GTGCCCTGAACCCTC‑ACA‑AACGCCGTTAACACGCTTGCAGGACGccaccac                                                                                                                                  >  2:1152309/1‑233 (MQ=255)
                                                                                          aCTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑TTATCTCAGATAAATGCAAACGCCTCGC‑CAAACC‑GGCGATCTTTCCGCG‑CATTACGCTCACTGCAAAACAGAACGCGGG‑CAATTT‑TCGCCCTCTCCAAACGTCCGGCCATATAGATATCATGCTCTGCCAGC‑CGACCCTGATCCTTC‑AAT‑ACCCCCGTTAACACGGTGCCAGTACGCCCACGcc                                                                                                                                 >  1:134658/1‑238 (MQ=255)
                                                                                          aCTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑TTATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTTCCAGC‑GTAACGTGATCCTGC‑AAT‑ACCGCCGTTAAAACGGTGTCCATACGCCCAcccc                                                                                                                                 >  1:362657/1‑238 (MQ=255)
                                                                                          aCTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑TTATTTCTGATAAATGCAAACGCATCGC‑CAAAAA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAAATCCCGGG‑CCATTT‑TCCCCCTCTCAAAACGTCCGGCAATATAAATATCAAGCTCTCCCCGC‑GTCACGTGATCCCGCAAAA‑ACCCCCGTTAACACGGTGCCA‑TACGCCCAcccc                                                                                                                                 >  2:615178/1‑238 (MQ=255)
                                                                                          aCTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGATTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CCTTACGCTCACCGCAAAACAGATCGCGGG‑CAATTT‑TCGCCCTCTCAAAAAGTCCGGCAATATAGATATCAAGCTCTTCCCGC‑GTACCGAGAACCCGC‑CAT‑ACCTCCGTTACAACGGTGACAGTTCAcccccccc                                                                                                                                 >  2:1198568/1‑233 (MQ=255)
                                                                                             gAATAACAGTTTAGTGGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACg                                                                                                                                                                                                                       <  1:496065/152‑1 (MQ=255)
                                                                                              aaTAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑TTATCTCAGATAAATTCAAACACCTCGC‑CAAACA‑AGGGGTCTTTCCCCG‑CCTTACGCTCACTGCAAAACAGAAACCGGG‑CAATTT‑TCTCCCTCTCCCAACATCCCGCCAAATAGATATCATGCTCCTCCACC‑CCCCCCTGATCCTTC‑AAT‑ACACCCCTTTACACCGTGCCCGGACCCCCACCCCCGcc                                                                                                                             >  2:1414904/1‑238 (MQ=255)
                                                                                                      tttAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGGTTTTTT‑TTATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TTGCCCCCTCCAAAAGTCCCGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCCCCGTTAAAACGGTGCCCGTACGCCCACGc                                                                                                                                  >  1:534657/1‑225 (MQ=255)
                                                                                                                                gggggggggTTTTTTTAATACCCAAGAAAAAGGCAAACCAACCCC‑CAACCG‑GGCACTCTCCCCGCA‑CATCACGCTACCGACAAACCAGATCGCGGG‑CAATTC‑CCCCCATCCAAAACCGTCCGACATTAAAGATACCATCCCCGCCCCGC‑GACCCGTGCCCCCCC‑AAT‑CCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTg                                                                                            <  2:362657/237‑1 (MQ=255)
                                                                                                                                    atggtttttttt‑ATAATACAGATAAATACACACGCAGCGC‑AACAAA‑GGCCTTTTCCCCCCC‑CATTACGCTAAGCGCAAACAATAGGGGGGT‑CAGTTT‑CCCCCTCCACAAAACTCCGGGTAATAGAGA‑ACCCAGCCCCGCCCGCGGTCCCGTGCTCCT‑C‑AATGGCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGAc                                                                                       <  2:907780/233‑1 (MQ=255)
                                                                                                                                                   atCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCa                                                                                     >  1:36808/1‑226 (MQ=255)
                                                                                                                                                       cAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGaaa                                                                     >  1:366333/1‑238 (MQ=255)
                                                                                                                                                            aaaTGCAACCGCACCGC‑CAAACA‑GGCGATCTCCCCCCG‑CATTACGCCCACTGCAAAACAGACCGCGGG‑CAATTT‑TCGCCATCTAAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GAACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCt                                                               <  1:246955/239‑1 (MQ=255)
                                                                                                                                                               tGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCaa                                                            >  1:51221/1‑239 (MQ=255)
                                                                                                                                                                    aCGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGc                                                                                                                                        >  1:483683/1‑158 (MQ=255)
                                                                                                                                                                    aCGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTc                                                        >  1:869599/1‑238 (MQ=255)
                                                                                                                                                                    aCGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTc                                                        >  1:751764/1‑238 (MQ=255)
                                                                                                                                                                    aCGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGACCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATAGCTTGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACCAGGTGCAAGTACGCCCACTCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTCGCAGACCAGTATGCTTCCACGACAGGGCCCCaacccc                                                        >  2:1690207/1‑234 (MQ=255)
                                                                                                                                                                        caccccaaaaCA‑GGCGATCTTCCCGCG‑CATTCCGCTCACTGCAAAACAGATCGGGGG‑CAATTT‑TCCCCATCAAAAACCGCCCGGAAATATAGATATCACGCTCCGCCGGC‑GTCCCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCag                                                    <  1:615178/232‑1 (MQ=255)
                                                                                                                                                                         tCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCtt                                                                             >  1:1716238/1‑212 (MQ=255)
                                                                                                                                                                          ccc‑cAAACA‑GGCGATCTCCCCGCG‑AATTACCCTCCCTAAAAAACAGATCGCGGG‑CAATTT‑CCGCCATCTAAAAACGTCCGGCAATATAGATATCACGCTCTCCCAGC‑GTCCCGTGACCCTGC‑AAT‑CCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAgaga                                                 <  1:189724/237‑1 (MQ=255)
                                                                                                                                                                          cGC‑CAAGCA‑GGCGTACTCCCCGCT‑AATCACCCTCCCACCAAAACCGAT‑GCGGGTCATTGT‑CCACCATCACACAACGTCCGGAAATATAGATTTCATCCTCGCCCGGC‑GTCCCGTGTCCCTGC‑ATT‑TCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCag                                                    <  2:376587/236‑1 (MQ=255)
                                                                                                                                                                            ccaaaaCA‑GGCGATCTCCCCGCC‑CATTCCGCTCCCGGAAAACCGGACCGGGGG‑CAATTT‑TCCCCACCACAAACCGTCCGGAAATAAAGATACCATGCTCTGCCGGC‑GTCCCGTGACCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGAt                                                <  1:1414904/236‑1 (MQ=255)
                                                                                                                                                                            c‑cAAACACGGCTATCTCCCCCCG‑CATTACGCTCACTAAAAAACAGCCCGCGGC‑CATTTT‑CCCCCATCACAAACCTCCCGAAAATATAGATATCACCCTCTCCCAGC‑GTCCCGTGACCCTGC‑AAT‑CCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGAt                                                <  1:1253824/239‑1 (MQ=255)
                                                                                                                                                                                      gCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGAt                                       >  1:114383/1‑239 (MQ=255)
                                                                                                                                                                                       cGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGa                                        >  1:797478/1‑237 (MQ=255)
                                                                                                                                                                                        taTCTCCCCGCG‑CATTACGCTCACTGAAAAACAGACCGCGGG‑AATTTT‑CCCCCATCTAAAACCGCCCGGAAATATAGATATCATCCTCTGCCAGC‑GTCCCTTGCCCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGAtg                                      <  1:1241041/237‑1 (MQ=255)
                                                                                                                                                                                              cccGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGctct                               >  1:956757/1‑239 (MQ=255)
                                                                                                                                                                                                   g‑cATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATa                                            >  1:325743/1‑221 (MQ=255)
                                                                                                                                                                                                        tACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcgccc                       >  1:845601/1‑238 (MQ=255)
                                                                                                                                                                                                           gCTCACTAAAAAACAGATGGCGGG‑AAATTT‑CCGCCATCCAAAACCGCCCGAAAATATAGATATCATGCTCTGCCAGC‑GTCCCGAGACCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACgcccgccc                   <  1:1198568/239‑1 (MQ=255)
                                                                                                                                                                                                               aCTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGt               >  1:1381198/1‑239 (MQ=255)
                                                                                                                                                                                                                cTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTa              >  1:1257728/1‑239 (MQ=255)
                                                                                                                                                                                                                cTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTa              >  2:48904/1‑239 (MQ=255)
                                                                                                                                                                                                                 tgaaaacgagagCGCGCG‑CAATTT‑TCCCACACTAAACCCGCCCGGAAATAGAGATATCAGCCTCTCCCGGC‑GTCCCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTaa             <  1:1843368/231‑1 (MQ=255)
                                                                                                                                                                                                                  gCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTaaa            >  1:532878/1‑239 (MQ=255)
                                                                                                                                                                                                                           aTCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCGAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata    >  1:713337/1‑238 (MQ=255)
                                                                                                                                                                                                                           aTCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCAcgcccgcc                    >  1:278204/1‑222 (MQ=255)
                                                                                                                                                                                                                           aTCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATg          >  1:1727772/1‑232 (MQ=255)
                                                                                                                                                                                                                           aTCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata    >  1:1456817/1‑238 (MQ=255)
                                                                                                                                                                                                                           aTCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata    >  1:39541/1‑238 (MQ=255)
                                                                                                                                                                                                                           aTCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGata    >  1:81378/1‑238 (MQ=255)
                                                                                                                                                                                                                           aTCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGACGCTGCCCTTCACGCCCGCCCCAGAAAAGGGTGaaat   >  2:160390/1‑239 (MQ=255)
                                                                                                                                                                                                                           aTCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCACCTCAAGCTCGCAGAGATCACACAGATGCTGCTCTTCACGACGGCCCCACAAAAAGGTGcta    >  2:1324368/1‑238 (MQ=255)
                                                                                                                                                                                                                            tCGGGGG‑CATTTT‑TCGCCCTCAAAAAACGCCCGGAAATATAGATTCCATGCTCGCCGACC‑GTCCCGTGTCCCTGC‑AAT‑CCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATc  <  1:1819775/239‑1 (MQ=255)
                                                                                                                                                                                                                             cgcgGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAACTGGTGATATc  >  2:184420/1‑238 (MQ=255)
                                                                                                                                                                                                                             cgcgGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATc  >  1:152524/1‑238 (MQ=255)
                                                                                                                                                                                                                             cgcgGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGGGATATc  >  2:1501992/1‑238 (MQ=255)
                                                                                                                                                                                                                             ccgcgg‑CAATTTCTCGCCCTCCCAAACCTCCCGGAAAAAAAAATTTCACGCCCTCCCAGC‑CTCCCGTCACCCTCC‑AAT‑CCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATc  <  1:352240/235‑1 (MQ=255)
                                                                                                                                                                                                                               gggg‑CAATTT‑CCCCCTTCTCAACACGTCCGGCAATAAAGATCTCTGTCTCTCCCAGC‑TTACCGTGATCCGGA‑AAT‑GCCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATc  <  1:1191276/235‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                               
GCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAACAGTTTAGTTGCCGTTCTTCCCGCCTGTCAGGGGCGGGTTTTTTT‑ATATCTCAGATAAATGCAAACGCATCGC‑CAAACA‑GGCGATCTTCCCGCG‑CATTACGCTCACTGCAAAACAGATCGCGGG‑CAATTT‑TCGCCATCTCAAAACGTCCGGCAATATAGATATCATGCTCTGCCAGC‑GTACCGTGATCCTGC‑AAT‑ACCGCCGTTAACACGGTGCCAGTACGCCCACGCCAGCCCGCTTCCGGTTGTTCAACCACCGGCACCACTTGCAGACCAGGATGCTTCAACGAAAGCGCCTCAAGCTCGCAGAGATCATACAGATGCTGCTCTTCACGCCCGCCCCAGTAAATGGTGATATC  >  NC_007779/3609304‑3609758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑