BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,104,271	T→C	12.0%	L147P (CTC→CCC)	ompR →	two‑component system response regulator OmpR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,104,271	0	T	C	12.0%	302.4 / 3.8	144	L147P (CTC→CCC)	ompR	two‑component system response regulator OmpR
Reads supporting (aligned to +/- strand): ref base T (50/68); new base C (17/3); total (69/75)
Fisher's exact test for biased strand distribution p-value = 4.82e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 145 total aligned reads displayed.

CGACGTCTTCGTAGTCAGAGCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAGACCGT  >  NC_007779/4104033‑4104505

cGACGTCTTCGTAGTCAGAGCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCt                                                                                                                                                                                                                                            <  1:196635/239‑1 (MQ=255)

      cTTCGTAGTCAGAGCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTAc                                                                                                                                                                                                                                      <  1:657084/239‑1 (MQ=255)

        tCGTAGTCAGAGCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTAcgc                                                                                                                                                                                                                                    <  1:955068/239‑1 (MQ=255)

            aGTCGGGGCAACCGGATGCGGATCATTTTGCAGACGGAGGAAGGGGGAGAGGTGGACCGTATCGTGGGCGTGGAGATTGTCGCTGACGGCTACATTCCAAAGCCGTTTAACCC‑GCGGGAACTCCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGGACTGCCAGGCGCGCCGGCACA‑GGAAGAGGCGGTAA‑TTGCCTT‑CGGT‑AAGTTCAAACTTAACCTCGGTAcgcgcg                                                                                                                                                                                                                                 <  2:910128/238‑1 (MQ=255)

              tCAGAGCAACCCGATGCCGCTCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGACTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGGAA‑ATTCTTT‑CGGA‑AAGCTCAAACTTAACCCCGGTAcgcgggcaa                                                                                                                                                                                                                              >  1:223853/1‑234 (MQ=255)

              tCAGAGCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTTA‑TTGCTTT‑CGGG‑AAGGTCAAACTTCACCCCGGGGcgcgggcaa                                                                                                                                                                                                                              >  1:602290/1‑234 (MQ=255)

              tCAGAGCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGGCC‑ATGTGTT‑CGGT‑AACTTGTAACTCAACCACGGCACCCGCGcaa                                                                                                                                                                                                                              >  2:1172339/1‑239 (MQ=255)

                 gagCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑ATGCTTT‑CGGT‑AAGTTCAAACTTAACCACGGTACGCGCGAAAAGt                                                                                                                                                                                                                           >  1:1032274/1‑239 (MQ=255)

                 gagCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGGAATTTGCTTC‑CGGA‑AGGTTCAAA‑TTAAACCCGGTAACCGCGGAATgg                                                                                                                                                                                                                           >  2:1801141/1‑238 (MQ=255)

                   gCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATg                                                                                                                                                                                                                            <  1:1050166/236‑1 (MQ=255)

                            tGCTGATCATTATGGGGACGGCGAAGGGGGAGGAGGTGACCCGTTCCGTGGGCAGGGATGTGGGCGCTGACAACTACA‑TCCCAAACCCTTTAACCCGGGGTAAACTGCTGCCCCGTACCCGGGGGGGGCGGGGTCGTCAGGCGAACGAACTGCCGGGCGCACCGTCACA‑GGAAGAGGCGGTAT‑TTGTTTT‑CGTT‑AAGTTAAAACTTAACCTCGGTCCGCTCAAAATGTCCCGCAAAgg                                                                                                                                                                                                                 <  2:249172/238‑2 (MQ=255)

                            tGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAAACTCGGGACGCGCGAAATGTTCCGCGAAGAc                                                                                                                                                                                                                >  1:1278601/1‑239 (MQ=255)

                            tGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGG‑AAGCTCCAACTTAACCCCCGGGCGCCCGAAACGTTCcgccgaaac                                                                                                                                                                                                                >  2:1586312/1‑233 (MQ=255)

                            tGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGGAA‑ATGTTGT‑TGGG‑AAGGTTAAACTTAACCTCGGGACGCCCGGAAAGttgtgcgcgaa                                                                                                                                                                                                                 >  2:931292/1‑229 (MQ=255)

                                 aTCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAAACTCGGTACGCGCGAAATGTTCCGCGAAGACGAGcc                                                                                                                                                                                                           >  1:249172/1‑239 (MQ=255)

                                 aTCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAAATTAACCCCGGTACGCGCGAAATGTTCCGCGAAAACGAGc                                                                                                                                                                                                            >  1:1082625/1‑238 (MQ=255)

                                      tATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGGATCCGTGCGGTGCTGCGTCGTCAGGCGCACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CCGG‑TAGCTCTAAATTAAACCCCGGACGGGCGTAAAGTTCCCCGCAGACAGGCCgcacc                                                                                                                                                                                                      >  2:1080736/1‑235 (MQ=255)

                                        tGGGGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTACCCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGACCTGCCAGGCGCCCCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCg                                                                                                                                                                                                    <  1:1370464/239‑1 (MQ=255)

                                             aCGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGGTTT‑CGGT‑AAGTTCCAACTTAACCCCGGTAAGCGGGGAATGGTCCGCGGAAACCAGCCgcttcaccccc                                                                                                                                                                                                >  2:233986/1‑228 (MQ=255)

                                             aCGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGCTGCCGCTcc                                                                                                                                                                                                >  1:1360500/1‑237 (MQ=255)

                                             aCGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGG‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGGCGCTGCCGCTCa                                                                                                                                                                                                >  1:1920196/1‑238 (MQ=255)

                                             aCGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGGAA‑TTGCTTT‑CGGT‑AAGGTCCAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTcc                                                                                                                                                                                                >  1:2043912/1‑237 (MQ=255)

                                               ggCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGt                                                                                                                                                                                                                           <  1:949802/209‑1 (MQ=255)

                                                             aagTGGACCGTATCGTCGGCCGGGAGATTGGCGCGGACGACTACATCCCAAAACCGTTTAACCC‑GCGTGACCGGCTGGCCCGTATCCGTGGGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTACCCTCGGTACGCGCGAATTGTCCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTg                                                                                                                                                                                 <  2:118018/237‑1 (MQ=255)

                                                                 ggACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAACCCGTTTACCCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGt                                                                                                                                                                             <  1:1463495/237‑1 (MQ=255)

                                                                  gACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTAAGCGCGAAATGTTCCGCGAAGACGAGCCGAAGCCGCTCACCAGCGGGGAGGTTGCggg                                                                                                                                                                             >  1:188011/1‑235 (MQ=255)

                                                                  gACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGGTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCCCACCAGCCGGGAGTTTTCggg                                                                                                                                                                             >  1:481141/1‑235 (MQ=255)

                                                                      gTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCCTT‑CGGT‑AAGTTCAAACTTAACCCCGGTACGCGCGGAATGGTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAg                                                                                                                                                                      >  1:481209/1‑239 (MQ=255)

                                                                       tATCGTAGGCCTGGAGATTGGCTCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTTCTTT‑CGGG‑AAGGTCAAACTTAACCCCGGTACGCGCGAAATGTTCCCCGAAGACGCGCCGATGCCGCCCCCCAGCGGTGAGCTTGCGGTACTGAAgg                                                                                                                                                                     >  1:696090/1‑239 (MQ=255)

                                                                       tATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGGTCAAACTTAACCTCGGGACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGGGAGGTTGCGGGACTGAAgc                                                                                                                                                                     >  1:118018/1‑238 (MQ=255)

                                                                       tATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGG‑AAGTTCAAACTTAACCCCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCCCACCAGCGGGGAGTTTGCGGTACTGAAgg                                                                                                                                                                     >  1:1062852/1‑239 (MQ=255)

                                                                            tAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCCCGGTACGCGCGAAATGGTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGGGAGTTTGCGGGACTGAAGGCACTg                                                                                                                                                                >  1:283476/1‑239 (MQ=255)

                                                                                 cTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCgg                                                                                                                                                                                                                                         <  2:1083071/161‑1 (MQ=255)

                                                                                 cTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGCATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGCGGCGGGCA‑CTGCCTT‑CGGG‑AAATTCCAACCCACCCTCTGCAAGCGCGAAAAGTTCCGCGGAGACAAGCCCACACACCTCACCAGCGGCGAGATTGCGGGCTCTAAGACACTGGTCAg                                                                                                                                                           >  2:26206/1‑239 (MQ=255)

                                                                                  tGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGGGGGTTTGCGGTACTGAAGGCACTGGTCAg                                                                                                                                                           >  1:1703681/1‑238 (MQ=255)

                                                                                  tGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGAAA‑TTGCTTT‑CGGG‑AAGGTCAAACATAACCCCGGTACGCGCGAAAAGTTCCCCGAAGACGAGCCGATGCCGCTCACCAGCGGTGGGTTTTCGGTACTGAAGGCAcctgtct                                                                                                                                                            >  1:255323/1‑231 (MQ=255)

                                                                                       aTTGGCGCTGACGACTACATCCCAAAACCGTTTACCCC‑GCGTGACCTGCTGGCCCGTATCCGTGCGGTGCGGCGTCGTCAGGCGAACGAACTGCCAGGCGCCCCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAgg                                                                                                                                                                     <  1:124132/223‑1 (MQ=255)

                                                                                                 acgacTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCCCACCAGCGGTGAGTTTGCGGTACCGGAGGCACTGGTCAGCCATCCGCGTGCGcc                                                                                                                                            >  1:686657/1‑238 (MQ=255)

                                                                                                      tACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGCACGCGCGAAATGTTTCGCCGAGGCGAGACGAATCCGCCCCCCAGCGGGGAGTTTGCGGGGTTGCAGGGACCGGTCAGCCCTCCCCGGGGGCCGccct                                                                                                                                       >  2:1813600/1‑238 (MQ=255)

                                                                                                           cccAAACCCTTTAAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACG‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTAAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAgg                                                                                                                                                                     <  1:873208/202‑1 (MQ=255)

                                                                                                              aaacCCGTTCAACCC‑GCGAGAACTGCTGGCCGGTACCCGGGCGGTGCTGGGTCTCCGGGCGAACGAACGGCCAGGCGAACCTCCCAA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGGGAAATGTCCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATa                                                                                                                              <  2:1032274/239‑1 (MQ=255)

                                                                                                              aaaaCCGTTAAACCG‑GCGAGACCTGCGGCCCCGTAGCCGGGGAGTGCGCCTGCGGCAGGCAAGCGAACGGCCAGGCTCGCGGCCACG‑GGAAGGGGCGGTAA‑TTTCTTT‑AGGT‑AAGTGCAAATTTAACATCGGAACGCGGGAAATGTGCCGAAAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATa                                                                                                                              <  2:248423/239‑1 (MQ=255)

                                                                                                               acaCCGTTAACCCC‑GCGGGACCGTCTGCCCCGATTCCGTGGGGGGCTGCGTCGTCGGGCGACGGAACTGCCGGGCCCACCGTCACA‑GGAAGAGGGGGTAA‑TTGCTTT‑CGGT‑AAGTTCAACCTAACCCTGGGTCCGGGCGAATTGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATaa                                                                                                                             <  2:283476/237‑1 (MQ=255)

                                                                                                                     tttAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGGGGGTTTGCGGTACTGAAGGCACTGGGCAGCCATCCCCGGGAGCCCCCCTCCCGCGCTAAGCtgat                                                                                                                       >  1:1800468/1‑239 (MQ=255)

                                                                                                                          ccc‑GCGTGACTGGCTGGCCCGTATCGGTGCGGTGCTGCGCCGTCAGGCTAACGAACTGCAGGCCGCCCCGTCACC‑GGAAGAGGGAGTAA‑TTTCTTT‑CGGT‑AAGTCCAAGCTTAACCTCGTTCCGCGCGAAATTTTCCGGGAAGGCGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCATCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAAcc                                                                                                                  <  2:725078/239‑1 (MQ=255)

                                                                                                                                gTGAACTGCTGGCCGGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTCCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCt                                                                                                                          <  1:329387/226‑1 (MQ=255)

                                                                                                                                  gAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTAAAACTTACCCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCg                                                                                                           <  1:1460497/239‑1 (MQ=255)

                                                                                                                                   acctgcggGCCCGTATCCGTGCGGTGCGGCGTCGCCAGGCGAACAAACTGCAAGGCGCACCGTCACA‑GGAAGGGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTAAACCTTAACCTCGGTACGCGCGAAATGTTCCGGGAAGCCGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCg                                                                                                           <  1:612246/236‑1 (MQ=255)

                                                                                                                                   acctgcgcgCCGGTATCCGTGCGGTGCTG‑GGCGGGAGGCCAACCGACCGGCCGGCGGATCAGCCCAGGGAAGAGGCGGTAA‑TTGCTTG‑CGGT‑AAGTTAAAACTTACCCTCGGTCCGCGGGAATTGTCCCGGGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCg                                                                                                           <  2:487915/230‑1 (MQ=255)

                                                                                                                                          ggCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCCTT‑CGGG‑AAGTTCAAACTTAACCCCGGTACGCGGGAAATGTTCCGCGGAGACGAGCCGATGCCGCCCCCCAGCGGGGGGTTTTCGGTACTGAAGGAACTGGTTAGCCCTCCGCGGGGGCCGCGCTCCCGCGATAAGCTGATGAACCTTGctgtcgcctatt                                                                                                   >  2:329387/1‑228 (MQ=255)

                                                                                                                                           ccccGTTTCCGGGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGGGGTAA‑TGGCTTT‑CGGT‑AAGTTCAACCTTACCCTCGGTCCGCGGGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAAcc                                                                                                                  <  1:1877556/222‑1 (MQ=255)

                                                                                                                                              cGTATCCGTGCGGTGCTGCGTCGTCGGGCGAACGACCGGCCGGGCGCCCCGTCACA‑GGAAGAGGGGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTACCCTGGGTACGCGCGAAATTTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAata                                                                                               <  1:1813600/239‑1 (MQ=255)

                                                                                                                                                     gTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCATCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGG‑AAGTTCAAACTTAAACTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGGGGGTTTGCGGGACTGAAGGCa                                                                                                                                                                   >  1:1708728/1‑164 (MQ=255)

                                                                                                                                                       gCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCaa                                                                                       <  1:1210037/238‑1 (MQ=255)

                                                                                                                                                            gctggGCCGTCGGGGGAACGAACTGCCAGGCGCCCCGTCACG‑GGAAGGGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTCCGCGGGAAATGTTCCGGGAAGCCGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGaa                                                                                  <  1:1801141/238‑1 (MQ=255)

                                                                                                                                                            cgggggtctcaaGGCGGACGAACTGCGAGGCGCACCGTCGAG‑GGAAGGGGGGGTAG‑TTGCTTT‑CGTT‑ATGTTCAAACTTACCCTCGGTACGGGCGAATTGTCCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGaa                                                                                  <  2:2069292/227‑1 (MQ=255)

                                                                                                                                                             ctgcGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGGGAGGTTGCGGGACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCCATGGAAc                                                                                 >  1:658383/1‑238 (MQ=255)

                                                                                                                                                                   cgtcAGGCGAACGACCTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑GGGT‑AAGTTCAAACTTAACCTGGGTACGCGCGAAATGTCCGGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCa                                                                           <  1:1012574/238‑1 (MQ=255)

                                                                                                                                                                    gtcAGGCGAACGAACTGCCAGGCGCACCGTCAAA‑GGAAGAGGCGGTAA‑TTGTTTT‑CGGT‑AAGTTCAAACTTACCCTGGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATc                                                                         <  1:1333122/239‑1 (MQ=255)

                                                                                                                                                                     tcAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGG‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGGGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGGGAATATTCCGCAATGGAACGCTCCATCg                                                                        >  1:2050347/1‑239 (MQ=255)

                                                                                                                                                                     tcAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAAAGGCGGGCA‑TTGCTTT‑CTGT‑AAGTTCAAACATAACATCGGGAAGCGCGAAATGTGTCGCGCAGAAGAGCCGTTGCCGCTCGCCAGCTGAGGGGTTGGCGTACTGGAGACACTAGCGAGCCCTCCGCGGGAGTCCCTCTACCGCGGTAACCTGATGAACACTCCCCGAGGGCGTGAAGATTTCTCAATgggtccaccactc                                                                         >  2:2116283/1‑227 (MQ=255)

                                                                                                                                                                      cAGGCGAAGAAACGGCCGGCCGAACGGTCGAG‑GGAAGAGGGGGTAA‑TTGCTTG‑GGGT‑AAGGTAAACTTTACCCTGGGTAGGGGGGAATTGTGCCGGGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGa                                                                       <  2:1360500/239‑1 (MQ=255)

                                                                                                                                                                           gaacgaacTGCCAGGCGCACCGTCACG‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTg                                                                   <  1:1251449/238‑1 (MQ=255)

                                                                                                                                                                            aacgaacTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGGAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGGGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAAACTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCa                                                                 >  1:1812506/1‑239 (MQ=255)

                                                                                                                                                                                   tGCCAGGCGCACCGTTACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTTCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGGGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGGGGGCGGGAATATTCCGCCATGGAACGCCCCATCg                                                                        >  1:2147711/1‑225 (MQ=255)

                                                                                                                                                                                     ccAGGCCCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTACCCTGGGTACGCGCGAAATGTTCCGGGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTc                                                                                                      <  1:82939/193‑1 (MQ=255)

                                                                                                                                                                                      ccggCGCACCGTCCCA‑GGAAGAGGCGTTAA‑TTGCTTT‑CGTT‑AGGTTCAAACTTACCCTCGGTAGCCGCGAAATGTCCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGt                                                       <  2:798950/237‑1 (MQ=255)

                                                                                                                                                                                         gcggcccGTCACA‑GGAAGGGGCGGTAA‑TTGTTTG‑CGGT‑AAGTTCAAGCTGACCCGCGGTACGCGCGAAATGTTCCGCGAAGAGGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCt                                                     <  2:591631/233‑1 (MQ=255)

                                                                                                                                                                                           gccccctCACA‑GGAAG‑GGGGGTAA‑TTTTTTTCCGGA‑AAGTTCAATCTTACCCTCGGTCCGCGCGAAGTGTCCCGGGAAGGCGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTgcg                                                  <  2:586677/233‑1 (MQ=255)

                                                                                                                                                                                               cGTCACA‑GGAAGGGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTACCCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGcgccgc                                              <  1:1971994/239‑1 (MQ=255)

                                                                                                                                                                                               cGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGG‑AAGTTCAAACCTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGGGAGTTTGCGGTACAGAAGGCACTGGTCAGCCATCCCCGTGAGCCGCTCTCCCGCGGCAAGCTGAGGAGCCTTTCCCGGGGTCGGGAATATTc                                                                                            >  2:82939/1‑193 (MQ=255)

                                                                                                                                                                                                gTCACA‑GGAGGAGGCGGTAA‑TTTCTTT‑GGGT‑AAGTTCAACTTTAACCTCGGTCCGCGCGAATTGTTCCGGGAAGCCGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCa                                             <  1:1133306/239‑1 (MQ=255)

                                                                                                                                                                                                 tCACG‑GGAAGAGGCGTTAA‑‑TGCTTT‑CCGTAAATTTCAAACTTACCCTCGGTCCGCGCGAATTGTCCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCa                                             <  1:931292/238‑1 (MQ=255)

                                                                                                                                                                                                 tCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTGACCCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGaa                                                                                                 <  1:1676434/186‑1 (MQ=255)

                                                                                                                                                                                                  agacggaaaGGGGCGGTAT‑TGGCTTT‑GGGT‑AGGTTCAAACTTACCCTCGGTACGCGCGAAATGTTCGGCGAAGCGGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCa                                             <  1:352215/231‑1 (MQ=255)

                                                                                                                                                                                                   aca‑GGAAGAGGCGTTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTCCGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCAtgg                                          <  1:49830/239‑1 (MQ=255)

                                                                                                                                                                                                       ggAAGGGGCGGTAA‑TTGCTTT‑CGTT‑AAGTTCAAACTTAACCGCGGTACGCGCGAATTGTCCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCAtggtg                                        <  1:502574/238‑1 (MQ=255)

                                                                                                                                                                                                        gAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGGGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCg                                                                                                           <  1:78269/170‑1 (MQ=255)

                                                                                                                                                                                                          aggggcgtaaa‑TTGTTTT‑CGGT‑AAGTTCAAACTTACCCTCGGTCCGCGCGAAATGTCCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGgaag                                    <  1:771127/230‑1 (MQ=255)

                                                                                                                                                                                                            agGCGGGAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAAACCCGGTAAGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCCCACCAGCGGTGAGTTTGCGGGACTGAAGGCCCCGGTCAGCCCACCCCGGGAGCCGCTCCCCCGCGATAAGCTGATGGACCTTGCCCCTGGTCGGGAACATTc                                                                                            >  2:1371147/1‑181 (MQ=255)

                                                                                                                                                                                                             ggCGGTAA‑TTGCTTT‑CGGT‑AAGTTTAAAATTAAACTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCCGCGGGGAGGTTTCGGTACTGAAAGCACTGGTCAGCCATCCCCGTGAGGCGCTCTCCCGCGCTAATGTGATGAACCCTGCCCCTGGTCGTGAAAAATTCGCCATGGAACGCCCCATCGACGGTCAGGTTTCGCGGCTGGCCCGCATGGTGgcag                                    >  2:1720605/1‑236 (MQ=255)

                                                                                                                                                                                                                ggTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGGACTGaa                                                                                                                                                                       >  1:883093/1‑102 (MQ=255)

                                                                                                                                                                                                                           tt‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATcc                    >  2:1621942/1‑239 (MQ=255)

                                                                                                                                                                                                                            tgcGGT‑AAGTTCAATCTTAACCTGGTTCCGCGCGAAATTTCCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATcc                    <  1:1113699/237‑1 (MQ=255)

                                                                                                                                                                                                                              cGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCcgc                  >  2:722391/1‑239 (MQ=255)

                                                                                                                                                                                                                              cGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCcgc                  >  2:322383/1‑239 (MQ=255)

                                                                                                                                                                                                                                 t‑AATTTCAAACTTACCCTCGGTACGCGAGAAATGTCCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGt                <  1:1172339/238‑1 (MQ=255)

                                                                                                                                                                                                                                 t‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCg                                                                                                           >  2:383885/1‑147 (MQ=255)

                                                                                                                                                                                                                                 t‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCg                                                                                                           <  1:383885/147‑1 (MQ=255)

                                                                                                                                                                                                                                 t‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGt                <  1:1586312/238‑1 (MQ=255)

                                                                                                                                                                                                                                 t‑AAGTCCAACCTTCCCCCCGGTAGGCGCGACATTTCGCGCGAGGCGGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGt                <  2:490937/238‑1 (MQ=255)

                                                                                                                                                                                                                                   aaGTTCAAACTTACCCTCGGTCCGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGtt               <  1:233986/238‑1 (MQ=255)

                                                                                                                                                                                                                                          accTTACCTTCGGTACGCGCGAAATGTCCCGGGAGGGCGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAg       <  2:560106/237‑1 (MQ=255)

                                                                                                                                                                                                                                          aaCTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGa                                                                                   >  2:456517/1‑163 (MQ=255)

                                                                                                                                                                                                                                           aCTTAACCTCGGTACGCGGAAAATGTCCCGGGAGGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAGa      <  1:26206/239‑1 (MQ=255)

                                                                                                                                                                                                                                           aCTTAACCTCGGTACGCGCGAGATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAg       >  1:311981/1‑238 (MQ=255)

                                                                                                                                                                                                                                                aCCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAGACCg   >  2:1824552/1‑237 (MQ=255)

                                                                                                                                                                                                                                                aCCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAGACCg   >  1:617404/1‑237 (MQ=255)

                                                                                                                                                                                                                                                aCCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAGACCg   >  1:1701462/1‑237 (MQ=255)

                                                                                                                                                                                                                                                aCCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGGTTGCGGGACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAGACCgt  >  2:1338505/1‑238 (MQ=255)

CGACGTCTTCGTAGTCAGAGCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCC‑GCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACA‑GGAAGAGGCGGTAA‑TTGCTTT‑CGGT‑AAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAGACCGT  >  NC_007779/4104033‑4104505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`