BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,108,967	T→G	8.5%	S331A (TCG→GCG)	Y75_RS20260 →	DUF4153 domain‑containing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,108,967	0	T	G	8.5%	569.7 / 2.1	191	S331A (TCG→GCG)	Y75_RS20260	DUF4153 domain‑containing protein
Reads supporting (aligned to +/- strand): ref base T (40/126); new base G (22/2); total (63/128)
Fisher's exact test for biased strand distribution p-value = 1.65e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 193 total aligned reads displayed.

CGGGTTGCTGTTGACGCTGGCCTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGCGGTCGCTATGGACG  >  NC_007779/4108729‑4109205

      gCTGTTGACGCTGGCCTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTgg                                                                                                                                                                                                                                               <  1:2115429/239‑1 (MQ=255)

           tGACGCTGGCCTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTAt                                                                                                                                                                                                                                          <  1:1734174/239‑1 (MQ=255)

            gACGCTGGCCTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGGGTTTCTGGGGGGGGCGCTgggggttt                                                                                                                                                                                                                                         >  1:262280/1‑235 (MQ=255)

                 tagCCTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCTGGGCGTGCTGGCGG‑GGCCT‑GGGGTTCTTGGTGGGGGTGTGGGGGtttttttg                                                                                                                                                                                                                                     >  2:1669382/3‑237 (MQ=255)

                     cTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGc                                                                                                                                                                                                                                <  1:1493715/238‑1 (MQ=255)

                     cTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGc                                                                                                                                                                                                                                <  1:1697354/238‑1 (MQ=255)

                     cTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCa                                                                                                                                                                                                                               <  1:1207912/239‑1 (MQ=255)

                               ttGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGGCTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CTGGGGGTTACTGGGTGGGCCGCTGGGGT‑TTTTTTC‑CGCAT‑CTTCTggtg                                                                                                                                                                                                                    >  2:1211470/1‑237 (MQ=255)

                                        aTGGCTTTTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCa                                                                                                                                                                                                         <  1:1010219/239‑1 (MQ=255)

                                          ggCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCa                                                                                                                                                                                                                               <  1:933777/218‑1 (MQ=255)

                                              tttGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATcc                                                                                                                                                                                                   <  2:1690184/238‑1 (MQ=255)

                                              aTTGTCCGCGAGTCGCAAAAAGCGTCACTTCCCTGGACAGGGCGGTTGCGTTGCCTGATTAAAGCCGCTTTGCTGGTTGCTCCGCTGTATGTGGTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATcc                                                                                                                                                                                                   <  2:1787240/239‑1 (MQ=255)

                                                         tCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGttct‑t                                                                                                                                                                                        <  1:1429196/238‑1 (MQ=255)

                                                            gtaaaaaGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAgg                                                                                                                                                                                    <  2:2079398/237‑1 (MQ=255)

                                                            gCAAAAAGCGTCACTTCCCTGGCCAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCGCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTTCGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAgg                                                                                                                                                                                    <  2:2174538/239‑1 (MQ=255)

                                                            gCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAgg                                                                                                                                                                                    <  1:1669382/239‑1 (MQ=255)

                                                            gCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAgg                                                                                                                                                                                    <  1:343453/239‑1 (MQ=255)

                                                            gCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAgg                                                                                                                                                                                    <  1:753922/239‑1 (MQ=255)

                                                                     gTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGt                                                                                                                                                                             <  1:1288612/237‑1 (MQ=255)

                                                                                  aCAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGttt                                                                                                                                                               <  1:904729/238‑1 (MQ=255)

                                                                                   cAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGGTACTGGTGGGGTCGCTGGGGGATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGGCAAATCCCGGTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGGTTCg                                                                                                                                                             >  1:1441348/1‑239 (MQ=255)

                                                                                      ggCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑GT‑GGGGTTACTGGTGTGGGCGCTGGGGGATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TTCGGGCAAAGTGAAACTTGCGGGTTCGTTa                                                                                                                                                          >  1:237496/1‑239 (MQ=255)

                                                                                      ggCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGGGGTACTGGGGTGGGCCCTGGGGGGTTTTGTC‑AGCCT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTGGTTCT‑TTCGGGCACAGTGAACCCTGCGGGTTccgtt                                                                                                                                                          >  2:216275/1‑235 (MQ=255)

                                                                                      ggCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGGGCTGGCGGCGG‑CT‑GGGGTT‑CTTGGGGGGTGGCTGGGGGTTTTTTTC‑CCGCT‑CGTCCGGTCGAAAA‑GGGC‑AAATTCCGGTGTTTC‑TGAGGGCAACAGGGACCTTGGGGCTCCGttt                                                                                                                                                          >  2:442116/1‑238 (MQ=255)

                                                                                        ccGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAt                                                                                                                                                         <  1:1546476/238‑1 (MQ=255)

                                                                                        ccGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAt                                                                                                                                                         <  1:553478/238‑1 (MQ=255)

                                                                                            tgcgttggCTGATTAAATCCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGGCCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAttggt                                                                                                                                                     <  1:1223972/238‑1 (MQ=255)

                                                                                            tgcgttgcCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAttggt                                                                                                                                                     <  1:479824/238‑1 (MQ=255)

                                                                                            tgcgttgcCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAttggt                                                                                                                                                     <  1:1211470/238‑1 (MQ=255)

                                                                                              cgttgcCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATcc                                                                                                                                                                                                   <  1:1542529/191‑1 (MQ=255)

                                                                                              cgttgcCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTg                                                                                                                                                                     <  1:2161422/220‑1 (MQ=255)

                                                                                                ttgcCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAttggtgttgg                                                                                                                                                >  1:512998/1‑239 (MQ=255)

                                                                                                     tGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATa                                                                                                                                           <  1:1171025/239‑1 (MQ=255)

                                                                                                       aTTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAttggt                                                                                                                                                     <  1:22943/227‑1 (MQ=255)

                                                                                                       aTTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAt                                                                                                                                                         <  1:920653/223‑1 (MQ=255)

                                                                                                        ttAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑AG‑CT‑GGGGTTACTGGGGTGGGCGCTGTGGCATTTTGTC‑AGCGT‑TGTCTGG‑TGTAAA‑GGGGCAAATCCCGGTGTTCTGTCGGGGC‑AAGTGGAGCTTTGGGTTTCGTGAttggtgttgtggtttctg                                                                                                                                        >  2:541035/1‑230 (MQ=255)

                                                                                                                 cTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAttggt                                                                                                                                                     <  2:337847/217‑1 (MQ=255)

                                                                                                                 cTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGGGTTACTGGTGTGGGCGCTGGGGGATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGGTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGGTTCGTTATTGGTGTTGGTGATACTGGTGcttctt                                                                                                                               >  1:616008/1‑239 (MQ=255)

                                                                                                                 cTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑GG‑GT‑GGGGTTTCTTGGGTGGGCCCTCGGGGATTTTGTC‑AGCAC‑CGTCTTG‑GGTAAA‑GGGGAAAATCCCGGTTGTCT‑TTTGGGCCAAGTGGACCCTTCGGGTTTGGTTTTGGGTTTGGGGTTGTTGGTGgttctt                                                                                                                               >  2:298491/1‑239 (MQ=255)

                                                                                                                  tttGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGCCCGCTTGCAGGGCGTGGTGGCGG‑TG‑CG‑GGGGTTACTGGGGGGGGCGCTGGGGGGTGTTGTCGAGC‑T‑CTTGTGG‑CGTAAA‑GGGTCAAAACCCGGGGTTTT‑TCAGTGCAAAGTGAACCTTCCGGTTTCGTGACTTGTGGTTTGGATACTggatgttatta                                                                                                                              >  2:642686/1‑230 (MQ=255)

                                                                                                                        ggTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGc                                                                                                                        <  1:310890/239‑1 (MQ=255)

                                                                                                                        ggTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGc                                                                                                                        <  1:1141918/239‑1 (MQ=255)

                                                                                                                                 gCTGTTTGTGTTCGTCGCCGCCTGGGCGGCATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTgg                                                                                                               <  2:2150433/239‑1 (MQ=255)

                                                                                                                                 gCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTgg                                                                                                               <  1:298491/239‑1 (MQ=255)

                                                                                                                                  cTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGa                                                                                                              <  1:2138578/239‑1 (MQ=255)

                                                                                                                                   tGTATGGGTTCTCGGCCGCCTGTGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGa                                                                                                              <  2:1360393/238‑1 (MQ=255)

                                                                                                                                    gTATGTGTTGGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACa                                                                                                            <  2:2122791/239‑1 (MQ=255)

                                                                                                                                        gtgtTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGGCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTAt                                                                                                        <  2:526372/239‑1 (MQ=255)

                                                                                                                                             cgtcgCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCa                                                                                                   <  1:536060/239‑1 (MQ=255)

                                                                                                                                               tcgCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGCCTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑CG‑GT‑CGTGGCACTCGGGTGGTCGCCCGGGAATTTTGTC‑AGCCT‑CGTCCGG‑CGCACA‑GGGCCAAATCCCGCTGTTCC‑TCCGGGCCAAGGGAACCCTACCGGTTCGCTTTTTGGGGTGGTGGAACTGGGGCTTCTTAAATCGCCCGGGGTGGACACGTTGCGCAtt                                                                                                 >  2:407642/1‑239 (MQ=255)

                                                                                                                                               tcgCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGGATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGGTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTTTTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCAtt                                                                                                 >  1:1829962/1‑239 (MQ=255)

                                                                                                                                               tcgCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑GG‑GT‑GGGGTTTCCGGGGGGGGGGCTGGGGGGTTTTTTC‑AGGGTGCTTCGGG‑GGT‑AA‑GGGGGAAATACCGGTGGTTT‑TTTGGGGAAAGGGGACCTTGCGGGTTGGGTGTTGGGGGTGGTGTTAGTGGTGCTTCTTAATTTCCCGGTGGTGGGACGGATGCGCAtt                                                                                                 >  2:914608/1‑239 (MQ=255)

                                                                                                                                               tcgCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑CG‑CT‑GGTGTGAATGGTGGGGTCGCTGGGGGGTTTTGTC‑CGGAC‑CGTCCGG‑GGCAAA‑AGGGAACATCCCGCTGTTTT‑TCCGGGCAACGTGAACCTTTCGGGTTCGTTTTTGGTGTTGGTGGTACTGGTGGTTTTTAATTCGCCGGTGCTggg                                                                                                              >  2:1124419/1‑225 (MQ=255)

                                                                                                                                                 gccgccTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGGGTTTCTTGTGGGGTCGCCGGGGGATTTTTTC‑CGCCT‑CGTCTGG‑CGCAAA‑GGGCGAAAACCCGTTGTTTT‑TCAGGGCAAAGGGAACCTTTCGGGTTCGGTATTGGGGTTTGTGATACTGGTGCTTCTTAAATCGCCGGTGGTGGGCCGGATGCGCAtttg                                                                                               >  2:1707602/1‑237 (MQ=255)

                                                                                                                                                      cTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCGGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTg                                                                                           <  1:17860/238‑1 (MQ=255)

                                                                                                                                                       tGGGCGTTTTGGCTGCGGGTCGCTCAGTACGGTTGGACTGTCGGCCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGaa                                                                                         <  2:237496/239‑1 (MQ=255)

                                                                                                                                                       tGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGaa                                                                                         <  1:777685/239‑1 (MQ=255)

                                                                                                                                                         ggCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCa                                                                                                                                                                                                                               <  1:1351992/107‑1 (MQ=255)

                                                                                                                                                                   cTGCGGGTCGCTCAGTACGGCTGGACTGTCGTCCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATgg                                                                              <  1:1575847/238‑1 (MQ=255)

                                                                                                                                                                     gCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑GG‑GT‑GGGGTGTCTGGTGGGGGCGCCGGGGGAATTTGTC‑CGCAT‑CGGCTGG‑GGTAAAGGGGCAAAAT‑CCGCTGGTCT‑TCAGGGCCAAGGGAACCCTGCGGCTTCGTCATTGGTGTTGGTGATACTGGTTCTTCTTCATTCGCCGGTGCTGGGCAGTTATCGCATTAGCGTGGACACCCCTATGgccg                                                                           >  2:1003046/1‑237 (MQ=255)

                                                                                                                                                                        ggTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CC‑GGTGGTACTGGGGTGGTCGCTGGGGGATTTTGGC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGGTTCGGTATTGGTGTTGGTGATAATTGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGtt                                                                        >  1:697784/1‑239 (MQ=255)

                                                                                                                                                                             cTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAt                                                                                                                                                         <  1:243406/153‑1 (MQ=255)

                                                                                                                                                                                aGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGttct‑t                                                                                                                                                                                        <  1:2151039/119‑1 (MQ=255)

                                                                                                                                                                                  tACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGc                                                                                                                                                                                  <  1:1007925/123‑1 (MQ=255)

                                                                                                                                                                                  tACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGGGTTACTGGGGTGGGCGCTGGGGGATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGGGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCg                                                               >  1:1623534/1‑238 (MQ=255)

                                                                                                                                                                                   aCGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGc                                                                <  1:914608/236‑1 (MQ=255)

                                                                                                                                                                                            cTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑GT‑GGGGGTTATTGTGTGGGCGCTGGGGGATTTTTTC‑AGCCT‑CGTCTGG‑CGTAAA‑GGGGAAAAAGCCGTTGTTCT‑TCTGGGGAAAGGGAAACTTGTGGGTTCGATATTGGGGTTGGTGGTACTGGTGGTTTTTAATTCGCCGGTGGTGGAGCGGATGCGCATTAGCGTGAAACGACTTATGGGGCGGTATCTGGGCGGCAAAAaccca                                                    >  2:845104/1‑236 (MQ=255)

                                                                                                                                                                                            cTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGTACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACg                                                    <  1:2177864/239‑1 (MQ=255)

                                                                                                                                                                                            cTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACg                                                    <  2:969800/239‑1 (MQ=255)

                                                                                                                                                                                            cTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑GG‑CT‑GGGGTTAATGGTGGGGGCCCTGGGGGATTTTTTC‑AGGCT‑CGTCTGG‑CGTAAA‑GGGGAAAAACCCGGTGTTTT‑TCAGGGGAAAGGGAACCTTGCGGGTTCGGTATTTGGGTTTGGGGTACTGGGGCTTCTTAATTCGCCGGTGGTGGGCAGGATGCGCATTTGCGTGAAAAGCCCTATTGGGCGGTTTCCAAGAGGGaaaaaaca                                                     >  2:1950525/1‑235 (MQ=255)

                                                                                                                                                                                             tGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGt                                                   <  1:18322/239‑1 (MQ=255)

                                                                                                                                                                                             tGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGt                                                   <  1:566636/239‑1 (MQ=255)

                                                                                                                                                                                                cGACCGCTTGCAGGTCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCa                                                 <  1:1985034/238‑1 (MQ=255)

                                                                                                                                                                                                 gACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTTGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGa                                               <  1:1349573/239‑1 (MQ=255)

                                                                                                                                                                                                    ggCTTGCGGGTCGTGGTGGCGG‑TG‑CT‑GGTGTTAGTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGAcc                                             <  2:1099382/237‑1 (MQ=255)

                                                                                                                                                                                                    cGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCa                                            <  1:1950525/239‑1 (MQ=255)

                                                                                                                                                                                                       ttGGAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTTGGGTATTTTGTC‑AGCAT‑CGGCTGG‑CGTAAA‑GGGCAAAAGCCCGTTGTTCT‑TCAGGGCAAAGTGAACCGTGCGGTTTCGTTAGTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAgg                                          <  2:1275211/238‑1 (MQ=255)

                                                                                                                                                                                                       ttGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAATATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGt                                         <  1:2083041/239‑1 (MQ=255)

                                                                                                                                                                                                       ttGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGc                                                             <  1:364401/219‑1 (MQ=255)

                                                                                                                                                                                                         gCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGTGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTaa                                       <  1:1854442/239‑1 (MQ=255)

                                                                                                                                                                                                         gCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGAGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCa                                                                                                   <  2:473199/179‑1 (MQ=255)

                                                                                                                                                                                                            tggCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCAGG‑CGTAAA‑GGGCAAATTCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACt                                     <  2:1460846/237‑1 (MQ=255)

                                                                                                                                                                                                              gCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACt                                     <  1:1767250/236‑1 (MQ=255)

                                                                                                                                                                                                              gCGTGCTGGCGG‑AG‑CC‑GGGGTTACCTGTGTGGTCCCTGGGGGTTTTTGTC‑AGCAT‑CGTCTGG‑CGCAAA‑GGGCAAAATCCCGTTGTTCT‑TCCGGGCAAAGTGGACCCTGCGGTTTTCTTATTGGGGTTTGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTGTGCGGCTTAGCGGGAAAAGCCATTTGG‑GCGTTATCAGAGCGGCAAAAACACGTCAGGACCGGTAAcgttat                                 >  2:154625/1‑234 (MQ=255)

                                                                                                                                                                                                                 tGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGa                                                                                                              >  1:863072/1‑160 (MQ=255)

                                                                                                                                                                                                                  gCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTTTTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACa                              <  2:616008/239‑1 (MQ=255)

                                                                                                                                                                                                                  gCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGt                                                                                                          <  1:1262224/163‑1 (MQ=255)

                                                                                                                                                                                                                            g‑CT‑GGTGTTACTGGTGTGGGCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTAGTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAg                      <  1:2013321/238‑1 (MQ=255)

                                                                                                                                                                                                                            g‑CT‑GGGGTTACTGGTGTGGTCGCTGGGGGATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TTAGGGCAAAGTGAACCTTGCGGGTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGGCAGTATGCGCATTAGGGTGGACAGCCATATGGCGCGTTTTCAGAGCGGCAAAAAAACGTCAGACCAGGGAACTATCTACAAGCTCGAGc                     >  1:661923/1‑239 (MQ=255)

                                                                                                                                                                                                                                   tgtTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGc                >  1:1726942/1‑239 (MQ=255)

                                                                                                                                                                                                                                      tACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGCGGt             <  1:1969367/239‑1 (MQ=255)

                                                                                                                                                                                                                                      tACTGGGGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGCGGt             <  2:875155/239‑1 (MQ=255)

                                                                                                                                                                                                                                            tgtgGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGAc                                              <  1:1030225/200‑1 (MQ=255)

                                                                                                                                                                                                                                             gtgGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGCGGTCGCTATg      >  2:151063/1‑239 (MQ=255)

                                                                                                                                                                                                                                              gggTCGCTGGGGGATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGCGGTCGCTATgg     >  2:1996835/2‑239 (MQ=255)

                                                                                                                                                                                                                                                gTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAggg                                                                                                                                                                                   >  1:1752445/1‑63 (MQ=255)

                                                                                                                                                                                                                                                gTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGtt                                                                        >  1:1196036/1‑170 (MQ=255)

                                                                                                                                                                                                                                                gTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGtt                                                                        <  2:1196036/170‑1 (MQ=255)

                                                                                                                                                                                                                                                gTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGCg               >  2:2152765/1‑227 (MQ=255)

                                                                                                                                                                                                                                                 tCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGCGGTCGCTATGGACg  >  1:1402206/1‑239 (MQ=255)

CGGGTTGCTGTTGACGCTGGCCTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGG‑TG‑CT‑GGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTC‑AGCAT‑CGTCTGG‑CGTAAA‑GGGCAAAATCCCGTTGTTCT‑TCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGCGGTCGCTATGGACG  >  NC_007779/4108729‑4109205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`