BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,624,158	T→G	12.1%	V417G (GTG→GGG)	deoA →	thymidine phosphorylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,624,158	0	T	G	12.1%	499.0 / 3.7	152	V417G (GTG→GGG)	deoA	thymidine phosphorylase
Reads supporting (aligned to +/- strand): ref base T (17/109); new base G (22/3); total (40/112)
Fisher's exact test for biased strand distribution p-value = 5.06e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 152 total aligned reads displayed.

CGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAACGCTTTGGTGACGTCGGGGCTGACACCCTGGGTCATATCGCAGAAGCT  >  NC_007779/4623927‑4624393

cGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGc                                                                                                                                                                                                                                              <  1:248943/238‑1 (MQ=255)

         tCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGGTTAT‑CACGC‑GAAAAACGAAAACAAACGGCCGGGAGAGGGGGAAAA‑GGGGG‑AAAAG‑GGCAATTaa                                                                                                                                                                                                                                    >  2:2104427/1‑239 (MQ=255)

                   tACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGGTTTCCACCC‑CGAAGACGGAAACAACTTGCAGGAAA‑CCGCGCAAA‑CGGGG‑AAAAC‑CGCCAGTaaaacttacccta                                                                                                                                                                                                                         >  2:876578/1‑229 (MQ=255)

                        aaGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGGTATCCCCGC‑GGGAAACGGAAAAAACTGGCGGGAAA‑CGGCGCAAA‑CGGTG‑AAAGA‑GGCGAATAAAACTGTCGA‑T‑AAAGc                                                                                                                                                                                                                   >  2:151990/1‑238 (MQ=255)

                            ttttGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑AAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCAcc                                                                                                                                                                                                                <  1:214424/237‑1 (MQ=255)

                              ttGTCAGTGGAAGTGATGCCCGGGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCGTCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGaa                                                                                                                                                                                                            <  2:611398/239‑1 (MQ=255)

                                      gAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑cc                                                                                                                                                                                                   <  1:727598/239‑1 (MQ=255)

                                      gAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑cc                                                                                                                                                                                                   <  1:1509728/239‑1 (MQ=255)

                                      gAAATGGAGACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGcac                                                                                                                                                                                                       <  2:334966/236‑1 (MQ=255)

                                        aaTGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCaa                                                                                                                                                                                                 <  1:582113/239‑1 (MQ=255)

                                        aaTGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCaa                                                                                                                                                                                                 <  1:473282/239‑1 (MQ=255)

                                                           gggATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCaa                                                                                                                                                                                                 <  1:1145643/220‑1 (MQ=255)

                                                             gATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGc                                                                                                                                                                                                                                              <  1:615283/177‑1 (MQ=255)

                                                              aTGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑g                                                                                                                                                                          <  1:783910/238‑1 (MQ=255)

                                                              aTGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑Ga                                                                                                                                                                         >  1:1343063/1‑239 (MQ=255)

                                                              aTGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGCCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑g                                                                                                                                                                          <  1:1127052/238‑1 (MQ=255)

                                                               ttgCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCCTCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑Gaa                                                                                                                                                                        <  1:1883382/237‑1 (MQ=255)

                                                               tGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑Gaa                                                                                                                                                                        <  1:36950/239‑1 (MQ=255)

                                                               tGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑Gaa                                                                                                                                                                        <  1:841361/239‑1 (MQ=255)

                                                               tGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑Gaa                                                                                                                                                                        <  1:1748614/239‑1 (MQ=255)

                                                               tGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑Gaa                                                                                                                                                                        <  1:998412/239‑1 (MQ=255)

                                                               tGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑Gaa                                                                                                                                                                        <  2:1490450/239‑1 (MQ=255)

                                                               tGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑Gaa                                                                                                                                                                        <  1:139529/239‑1 (MQ=255)

                                                                  cAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATa                                                                                                                                                                      <  1:169427/238‑1 (MQ=255)

                                                                   aGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATaa                                                                                                                                                                     <  2:2094152/238‑1 (MQ=255)

                                                                   aGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATaa                                                                                                                                                                     <  2:1343063/238‑1 (MQ=255)

                                                                   aGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATaa                                                                                                                                                                     <  2:1765914/238‑1 (MQ=255)

                                                                   aGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCAAGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATaa                                                                                                                                                                     <  1:896832/238‑1 (MQ=255)

                                                                     tGGTTGCAGTGGGCGGCGGACGCCGTCAGGCCTCTGGCCCCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACg                                                                                                                                                                   <  2:6689/238‑1 (MQ=255)

                                                                     tGGTTGCAATGGGCGGCGGAGGCCGTCGGGCATCTGACACCTTCGATTACATCTTCGGCTTTACTGATACGGCGCGTCTGTGCGACCAGGTAGACGGCTAGCGTCCGCTGGC‑GGTTATCCACAC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCTAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTTCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACg                                                                                                                                                                   <  2:1154321/238‑1 (MQ=255)

                                                                     tGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACg                                                                                                                                                                   <  2:2080429/238‑1 (MQ=255)

                                                                      ggTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACg                                                                                                                                                                   <  1:1548690/237‑1 (MQ=255)

                                                                      ggTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACg                                                                                                                                                                   <  1:2009852/237‑1 (MQ=255)

                                                                         tGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGtata                                                                                                                                                              <  1:1911608/239‑1 (MQ=255)

                                                                              tGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATActgat                                                                                                                                                         <  1:238870/239‑1 (MQ=255)

                                                                                ggcggcGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑Gaa                                                                                                                                                                        <  1:1368948/222‑1 (MQ=255)

                                                                                 gcggcgGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATActgatct                                                                                                                                                       <  1:2104427/238‑1 (MQ=255)

                                                                                 gcggcgGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATActgatct                                                                                                                                                       <  1:674515/238‑1 (MQ=255)

                                                                                          gCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTaa                                                                                                                                             <  1:36085/239‑1 (MQ=255)

                                                                                               cAGGCATCTGCACCCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTg                                                                                                                                        <  2:558362/239‑1 (MQ=255)

                                                                                                    aTCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCTCA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCa                                                                                                                                   <  1:31129/239‑1 (MQ=255)

                                                                                                     tCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCAc                                                                                                                                  <  1:681812/239‑1 (MQ=255)

                                                                                                      cTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATaa                                                                                                                                                                     <  2:1592254/203‑1 (MQ=255)

                                                                                                      cTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACt                                                                                                                                 <  2:103310/239‑1 (MQ=255)

                                                                                                      cTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAAATTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATaa                                                                                                                                                                     >  1:1592254/1‑203 (MQ=255)

                                                                                                      cTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAA‑CGGGG‑AAAGC‑GGCAATTAAAATTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGGATCAGC‑GCATAACGGTATACTGATCTGATCATTTAAATTTGaaac                                                                                                                                    >  1:304758/1‑234 (MQ=255)

                                                                                                      cTGACACCATCGATTACAGCGTCGGCTTTACTGAGATGGCGCGTCTGGGCGACCAGGTAGACTGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AGAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACt                                                                                                                                 <  1:1016433/239‑1 (MQ=255)

                                                                                                        gACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAACACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATaa                                                                                                                                                                     >  1:2121928/1‑201 (MQ=255)

                                                                                                           acCATCGATTACAGCGTCGGCTTTACTGATAGGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAATa                                                                                                                            <  2:1604155/239‑1 (MQ=255)

                                                                                                             cATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACg                                                                                                                          <  1:2073168/239‑1 (MQ=255)

                                                                                                             cATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGGTATCCCCCC‑GGAAGAAGAAAAAAAACGGCAGGAAG‑CGGCGGAAG‑CGGGGAAAAGC‑GCCAA‑TAAAATTGCCGA‑T‑AAAGCCCCCGAAAGCACA‑CCCACCGGCCATCG‑CCGGATCAGG‑GAAAAAACGGATAATGGACTGAACATTTAAATTTTAAGCCCTggaaaag                                                                                                                          >  2:643025/1‑233 (MQ=255)

                                                                                                              aTCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACgg                                                                                                                         <  1:494055/239‑1 (MQ=255)

                                                                                                               tCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑Gaa                                                                                                                                                                        <  1:1478212/191‑1 (MQ=255)

                                                                                                               tCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACg                                                                                                                                                                   >  1:1173883/1‑196 (MQ=255)

                                                                                                               tCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACg                                                                                                                                                                   <  2:1173883/196‑1 (MQ=255)

                                                                                                                cGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGg‑ag                                                                                                                      <  1:1029908/239‑1 (MQ=255)

                                                                                                                cGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGg‑ag                                                                                                                      <  1:1284669/239‑1 (MQ=255)

                                                                                                                cGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGg‑ag                                                                                                                      <  1:1376656/239‑1 (MQ=255)

                                                                                                                cGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGg‑ag                                                                                                                      <  1:1694139/239‑1 (MQ=255)

                                                                                                                cGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACCC‑GAAAGACGAAAACAAATGGCAGGAAG‑CGGGGGAAGAGGGGG‑AAAGG‑GGAAATT‑AACATTCCCA‑G‑AAAACACCCGGAAACACA‑CCAAACGTCTATCG‑CCGGACCCGC‑GAATAACGGGATAACTATCTGAACACTTAAAATTGAAACACagaggtaggga                                                                                                                       >  2:1694139/1‑232 (MQ=255)

                                                                                                                 gATTACGGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGg‑ag                                                                                                                      <  1:848050/238‑1 (MQ=255)

                                                                                                                   ttACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACCCGGAAACAGAAAAACACCGGGC‑GGAGC‑AGGGGGAAA‑CGGGG‑AAAGC‑GGCAAATAAAATTGCCGA‑G‑AAAGCACCGGAACACACACCCAAAGGCCTA‑CG‑CCGGATCCGC‑GCAAAAAGGTATAATGCACCGTACCATTAAATTTGAAGCACTTAGTAAGG‑AGAAc                                                                                                                   >  2:494055/1‑239 (MQ=255)

                                                                                                                    tACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACg                                                                                                                          <  1:902415/232‑1 (MQ=255)

                                                                                                                         cGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTGTTCCCGC‑GGAAGACGGAAACAACTGGCAGGGAG‑GGGCGGAAA‑CGGGG‑GAAGC‑GGGAAATAAAATTTCCGC‑T‑AAAAAACCGGAAAACACA‑ACAACCGTCTATAC‑CCGTATCCGC‑GAAAAAACGCAAACAGATCTGAACCTTTACATTTTAAACACTGAGTAAGG‑CGaaaaaaaga                                                                                                             >  2:1717609/1‑232 (MQ=255)

                                                                                                                            cGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAAc                                                                                                          <  1:1286893/239‑1 (MQ=255)

                                                                                                                            cGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAAc                                                                                                          <  1:1631310/239‑1 (MQ=255)

                                                                                                                             ggCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGGAAG‑CGGGG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAACACA‑CCCACTGTCTATCG‑CCGTATCAGC‑GAATAACGGGATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACg                                                                                                         >  1:25240/1‑239 (MQ=255)

                                                                                                                                 ttACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCa                                                                                                     <  1:190701/239‑1 (MQ=255)

                                                                                                                                   aCTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑AGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACg                                                                                                                                                                   >  2:201286/1‑176 (MQ=255)

                                                                                                                                   aCTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑AGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACg                                                                                                                                                                   <  1:201286/176‑1 (MQ=255)

                                                                                                                                       atatGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACt                                                                                                                                 <  1:1565963/206‑1 (MQ=255)

                                                                                                                                       atatGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGg‑ag                                                                                                                      <  1:630140/216‑1 (MQ=255)

                                                                                                                                       atatGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGc                                                                                                      <  1:1318677/232‑1 (MQ=255)

                                                                                                                                         atGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GGAAGAAGAAAACAACTGGCAGGGAG‑CGGCGGAAG‑GGGGG‑GAAGG‑GGGAATTAAACCTGCCCA‑A‑AAAACAACGGGAAACACA‑CCAAACGTCTAATG‑CCCTATCAGC‑GAATAACGGGATACCGAACTGATCATTTAAATTTGAAACACTGCGGAAGG‑AGAAAAAATGAAAAGTGCATTtattat                                                                                             >  2:2007212/1‑239 (MQ=255)

                                                                                                                                         atGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAAAGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTtattat                                                                                             >  1:1608573/1‑239 (MQ=255)

                                                                                                                                                 tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTAGCCACCC‑GGAAAACGGAAAAAACTGGCAGGAAG‑CGGGGAAAA‑CGGGG‑GAAGCGGGCAATAAAACTT‑CCGATT‑AAAGAACCGG‑AAGCACA‑CCCACCGCCTTTCGCCCGTA‑CAGG‑GAAAAACAGAAAACCCATCTTAACATTTAAATTTGTAGCACAGAGGACGGAAGAAAACATAAAATG‑GCATTttttattggcgctg                                                                                     >  2:1787320/1‑231 (MQ=255)

                                                                                                                                                 tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGGTTTCCACGC‑CGAAAAAGAAAACAAACGGCAGGGAA‑CGGCGGAAA‑CGGGG‑GAAGC‑GGCAATTAAACATTCCGG‑TAAAAGACCCGGAAGGACCA‑CCACCTGCCAAT‑G‑CCGGAATAGCGGAAAAACGG‑AAAATGAACAGAAAACTTAAATTTTTAACACCGAGTACGG‑GAAAAAAATTAAAACGGCACTTATTATgggggtc                                                                                      >  2:1318677/1‑233 (MQ=255)

                                                                                                                                                   tGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGAc                                                                                   <  1:1514097/239‑1 (MQ=255)

                                                                                                                                                          ccAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGc                                                                                                      <  1:142108/213‑1 (MQ=255)

                                                                                                                                                          ccAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTAATCACGC‑GAAAGACCAAAACAACTGGCAGGAAG‑CGGCGAAAA‑CCGGG‑GAAGC‑CGGAATTAAAATTGCCGA‑A‑AAACCACCGGAAAGCACA‑CCAACTGTCACTTG‑CCCGATCCGA‑GCATAAAAGTAAACGGATCTGAGCATTTCAATTTTGAGACCTTTGTACGG‑AGAACATATAAAACGGGCATTTATTATGGTGTTGGACTCATTcc                                                                            >  2:1992525/1‑238 (MQ=255)

                                                                                                                                                             ggTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGc                                                                                                      <  1:2181492/210‑1 (MQ=255)

                                                                                                                                                               tAGGCGGTCAGCGTCAGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGGG‑AAAGC‑GGCAAGTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCAt                                                                        <  2:1362803/238‑1 (MQ=255)

                                                                                                                                                                  actagcAGCGTCGGCTGGA‑GATGACCCCCGC‑GAAAGACGAAAACCTCTGGGAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGT‑T‑AAAGCACCGGAAAGCACA‑CCAACTGCCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGTTCTGATCATTTAGATTTGAAGCTCTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCGGGACTCATTCTGCTTCgg                                                                     <  2:1162475/233‑1 (MQ=255)

                                                                                                                                                                   cGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCgg                                                                     <  1:1095842/237‑1 (MQ=255)

                                                                                                                                                                    ggTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGc                                                                                                                                    <  1:1408346/174‑1 (MQ=255)

                                                                                                                                                                        aGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGGAGAAAACAACTGGCCGGAAG‑CGGCGAAAG‑AGGGG‑AAAGC‑GGCAATTAAAATTGCCGA‑A‑AAAGCCCCGGGAAGCACC‑CAAACAGGCCATTG‑CCGTCTCCGC‑GAATAACGGTAGACTGATCTGAACATTTTAATTTGAAGCACTGAAGACGG‑AGGACAAAAGAAAGGTGTCTTTATTTTGTTGCTGGGCTCATTCGGCATCAGCGGTACa                                                              >  2:808421/1‑239 (MQ=255)

                                                                                                                                                                            tCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGg‑ag                                                                                                                      <  2:1584133/179‑1 (MQ=255)

                                                                                                                                                                            tCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGg‑ag                                                                                                                      >  1:1584133/1‑179 (MQ=255)

                                                                                                                                                                             ccGGTGGC‑GGTTATCCACGG‑GAAAGACTAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGGA‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGGACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACagaag                                                          <  2:2166253/238‑1 (MQ=255)

                                                                                                                                                                                              aCGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATa                                                                                                                                                                      <  1:1731031/115‑1 (MQ=255)

                                                                                                                                                                                                     aaGACGAAAACAACTGGCAGGAAG‑CGGCGGAAG‑CGGGG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAACTCTTTGGTGACGTc                                   <  2:1011567/239‑1 (MQ=255)

                                                                                                                                                                                                      aGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAACGCTTTGGTGACGTCg                                  >  1:619158/1‑239 (MQ=255)

                                                                                                                                                                                                          gagaacaacTGGCAGGAAG‑CGGCGAAAG‑CGGAG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATCTGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAACGCTTTGGTGACGTCggg                                >  2:1853156/4‑237 (MQ=255)

                                                                                                                                                                                                             aacaacTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAACGCTTTGGTGACGTCGGGGCTGa                           <  1:1843813/239‑1 (MQ=255)

                                                                                                                                                                                                                 tgtGGCAGGAGG‑CGGCGAAAG‑GTGTA‑AAAGC‑GGAAATTAACGTTGTCGA‑T‑AAAGAACCGGAAAGCTCT‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTACACTGATCTGATCATCTAAATTTGAAGCGCTGAGTACGG‑ATAACAGATTAAACGTTCATTTATTATCGTGCTGGACTCATTCTGCATCGGCTCTATAGAACATGCAGAAAGCTTTGGTGACATCGGGGCTAACAcc                       <  2:1257884/237‑1 (MQ=255)

                                                                                                                                                                                                                 acTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAACGCTTTGGTGACGTCGGGGCTGACAcc                       <  1:643025/239‑1 (MQ=255)

                                                                                                                                                                                                                          aaG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAAATTGCCGA‑T‑AAAGCACCGGAAAACACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGGATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAAGGCTTTGGTGACGTCGGTGCTGACACCCTGGGCCat              >  2:574342/1‑239 (MQ=255)

                                                                                                                                                                                                                                gcgAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGg‑ag                                                                                                                      <  1:1657567/130‑1 (MQ=255)

                                                                                                                                                                                                                                  gAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAACGCTTTGGTGACGTCGGGGCTGACACCCTGGGTCATATCGCa        <  2:25240/238‑1 (MQ=255)

                                                                                                                                                                                                                                         ggTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAACGCTTTGGTGACGTCGGGGCTGACACCCTGGGTCATATCGCAGAAGc   <  2:189915/237‑1 (MQ=255)

CGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGC‑GGTTATCCACGC‑GAAAGACGAAAACAACTGGCAGGAAG‑CGGCGAAAG‑CGGTG‑AAAGC‑GGCAATTAAACTTGCCGA‑T‑AAAGCACCGGAAAGCACA‑CCAACTGTCTATCG‑CCGTATCAGC‑GAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGG‑AGAACATATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAACGCTTTGGTGACGTCGGGGCTGACACCCTGGGTCATATCGCAGAAGCT  >  NC_007779/4623927‑4624393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`