Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 249,538 T→G 35.1% H187P (CAC→CCC)  flhA ← flagellar type III secretion system protein FlhA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_007779249,5380TG35.1% 99.4 / 16.5 99H187P (CAC→CCC) flhAflagellar type III secretion system protein FlhA
Reads supporting (aligned to +/- strand):  ref base T (29/30);  new base G (24/15);  total (54/45)
Fisher's exact test for biased strand distribution p-value = 3.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 102 total aligned reads displayed.

CTGGGTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGTT  >  NC_007779/249300‑249773
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                             
cTGGGTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGt                                                                                                                                                                                                                                               >  1:559787/1‑239 (MQ=255)
      gcgCGGTTTCCCCTGTGTTTTGTCCGCCAGCCACCCCGTTTTGTAACCGAGGTTTAAACTGTAGGGTTCGATCAGCGGAAGGGTTTCCCAACTGACCCGCTCCTCGCTGGTTTCGTTAAAGGTTGGGTTGATCGTTTCGAGGCTTTTCCCTTCCGCCTCCC‑CCGCC‑AGC‑TGC‑TGTTT‑ACGCACCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCa                                                                                                                                                                                                                                         <  2:1938723/237‑1 (MQ=255)
       aGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACCGCC‑GGGGGGGcgt                                                                                                                                                                                                                                        >  2:2080800/1‑237 (MQ=255)
         cGGGTTCCCCTGTGCTTTGTCCACCAGCGCCCCCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCAtt                                                                                                                                                                                                                                       <  1:1171379/238‑1 (MQ=255)
         cGGGTTACCCGGTGCTTTGTCCCCCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCATCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCGCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCAtt                                                                                                                                                                                                                                       <  1:1299386/238‑1 (MQ=255)
               aCCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTTACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGGGGCACTccccgga                                                                                                                                                                                                                                >  2:422271/1‑235 (MQ=255)
                   tgtgCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGGGGCGTTCCCGGGac‑ca                                                                                                                                                                                                                            >  1:517227/1‑238 (MQ=255)
                     tgCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAGAAACGGCA‑GGGGCGGCCATCCCGGGac‑cacc                                                                                                                                                                                                                          >  1:218424/1‑238 (MQ=255)
                      gCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTATCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCCTCCC‑CCAGCCGGTAAAACCAAGCAAGGCGCTGAACAGCAAAAACGGCA‑GGTGTGGCCTTACCCGCac‑caccc                                                                                                                                                                                                                         >  2:2051758/1‑237 (MQ=255)
                          tGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGGAA‑CACCGcccg                                                                                                                                                                                                                     >  1:1648029/1‑236 (MQ=255)
                          tGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGGGGCCATCCCGGGAC‑CCCCGcccg                                                                                                                                                                                                                     >  1:1303997/1‑236 (MQ=255)
                           gTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGGGGGCATCCCGGTAC‑CACCGccccc                                                                                                                                                                                                                    >  2:1898527/1‑235 (MQ=255)
                             ccaccaGCGCCACCAGTTTGTAACCGAGGCTTAACCTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGCCCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑Cg                                                                                                                                                                                                                <  1:1631488/239‑1 (MQ=255)
                               accaGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGGGGCATTCCCGGTAC‑CACCGCCAGCA‑CGa                                                                                                                                                                                                               >  1:265506/1‑238 (MQ=255)
                               accaGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGGAC‑CACCGCCAGCC‑CGa                                                                                                                                                                                                               >  1:2004560/1‑238 (MQ=255)
                                      ccaccaGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCTGTAG‑CACCCCCAGCC‑AGAAAATaaa                                                                                                                                                                                                        >  1:911840/1‑237 (MQ=255)
                                      ccaccaGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGGAC‑CACCGCCAGCC‑CGAACATAAt                                                                                                                                                                                                        >  1:310857/1‑238 (MQ=255)
                                               tGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGGGGCGCTCCCGCTAC‑CACCCCCACCA‑CGAAAAAAAACCCgcgggtg                                                                                                                                                                                              >  2:1379586/1‑233 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCCGCCGGTAAACCCAAGCAGGGCGCGGAAAAGCCAAAACCGCAGGGTGGGGGCTTCCC‑GTAC‑CCCCCCCCCCACCAAACAAAACCCCGGGGGCgggga                                                                                                                                                                                          >  2:1510168/1‑233 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCCGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACAAAATCCCGGTGGCGGTGTagag                                                                                                                                                                                      >  1:2149126/1‑239 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTaga                                                                                                                                                                                       >  1:1914403/1‑238 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAAACCCGGTGGCGGGGTagg                                                                                                                                                                                       >  1:745297/1‑237 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGGAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGCAC‑CACCGGCAGCA‑CGAACATAAACCCGGGGGCGGGGgaga                                                                                                                                                                                       >  1:1835299/1‑238 (MQ=255)
                                                         gCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGGGGCGGTGTagaga                                                                                                                                                                                     >  1:1886798/1‑237 (MQ=255)
                                                                  gATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGGAC‑CCCCGCCCACA‑CGAACATAAACCCGGGGGCGGTGTTGAGCAcccgcgg                                                                                                                                                                             >  1:1129300/1‑232 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCCTCCG‑CCAGCCGGTAAAACCCAGCAGGGCGCTGAACAGCAAAAACGGTA‑CGGGGGGGGTTCCCCGGAC‑CCCCCCCCGCC‑CGAAACAAATCCCCGTGGTGGCGGAGCGCAccccacgg                                                                                                                                                                            >  2:1249494/1‑231 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGTAC‑CCCCGCCAGCA‑CCAACAAAATCCCGGGGGCGGTGTGGAGCCCCCACcgg                                                                                                                                                                            >  1:1636264/1‑237 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGGGTCGAGCACCCACAGGCt                                                                                                                                                                          >  1:1541140/1‑239 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGGAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGGGTAGAGCCCCCACggg                                                                                                                                                                            >  1:567900/1‑237 (MQ=255)
                                                                        cTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCACGCCGGGCGCTGAACAGCAACAAAGGCC‑GGCGCGGGCTTCCCCGTCA‑CACCCCCCGCA‑CCAACAAACACACGGGGGCGGGGGAGGGCAACCACAGGcggggcc                                                                                                                                                                     >  2:1613289/1‑233 (MQ=255)
                                                                           gATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCCATCCCCGGAC‑CCCCCCCACCC‑CCAAAAAAAAACCGGGGGCGGTGGAGGGCACCGACGCGCGTGcccccg                                                                                                                                                                  >  2:223885/1‑235 (MQ=255)
                                                                             tcaatgcgccggTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCAATCCCGGGAC‑CACCGCCCGCA‑CGAAAATAAACCCGGGGGCGGGGGAGAGGACCCACCGGCCTGCcagcac                                                                                                                                                                 >  1:1077508/11‑237 (MQ=255)
                                                                                 cGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACACAATCCCGGGGGCGGGGTCGAGGACCCACCGGCCTGCCCCCAGCAggg                                                                                                                                                            >  1:1381169/1‑238 (MQ=255)
                                                                                 cGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGGGGCGGTGGAGAGCACCGCGGGGCTTGCCACCACCTGGt                                                                                                                                                            >  1:313271/1‑239 (MQ=255)
                                                                                       gtttccccACCTGACCTGCTGCTCGCTGTTTTCGGTGATGGTGCGGTTCAGCTTTTCGAGGCTTTTCTCTCCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCCCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGc                                                                                                                                                       <  1:385183/233‑1 (MQ=255)
                                                                                           tCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGGGGCGGTGTAGAGCACCGACGGGCTTTCCAGCAGCTGGTTACGCACGTc                                                                                                                                                  >  1:2082028/1‑239 (MQ=255)
                                                                                              cAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCCTTCCCGGTAC‑CACCGCCAGCA‑CGCACATAATCCCGGTGGCGGTGTAGAGCACCCACCGGCTTGCCAGCAGCTGGCTACGCACGTCATg                                                                                                                                               >  1:546455/1‑239 (MQ=255)
                                                                                                  tGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATACTCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACCCCATGGGc                                                                                                                                            >  1:1091494/1‑238 (MQ=255)
                                                                                                   gACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGGGTagag                                                                                                                                                                                      >  1:948094/1‑195 (MQ=255)
                                                                                                   gACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGGGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGGTACGCACGTCATGGGCGa                                                                                                                                          >  1:756133/1‑239 (MQ=255)
                                                                                                    aCCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCCTTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGGGGCGGGGTAGAGCACCGACGGGCTTGCCAGCACCCGGTTACGCCCCTCATGGGCggt                                                                                                                                         >  1:1888214/1‑237 (MQ=255)
                                                                                                            ctCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCCGCAGCCGGCTACGCACGGCATGGGCGATATCGCCGt                                                                                                                                 >  1:2092986/1‑239 (MQ=255)
                                                                                                              cGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCACTCCCAGTAC‑CACCGCCAGCC‑CGAACATAATCCCGGGGGCGGTGTAGAGCACCGACGGGCTTGTCAGCACCTGGTTACGCACGTCACGGGCGGTATCGcccgtg                                                                                                                               >  1:639477/1‑235 (MQ=255)
                                                                                                                   gTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGcggg                                                                                                                                                                                                                 <  1:2079593/153‑4 (MQ=255)
                                                                                                                      tCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGGTACGCACGTCCAGGGCGATATCGCCGTTGTCGCCGAc                                                                                                                       >  1:126818/1‑239 (MQ=255)
                                                                                                                      tCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGGAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGGGTAGAGCACCCACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGAc                                                                                                                       >  1:1396958/1‑239 (MQ=255)
                                                                                                                           gATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCCTTCCCGGGAC‑CCCCGCCAGCA‑CCAACAAAAACCCCGGGGCGGTGGAGAGCACCGACGGGCTTGCCAGCAGCCGGGTACCCCCGTCCTGGGCGCAATCGCCGCGGTCGACGACGCggg                                                                                                                  >  2:2104253/1‑239 (MQ=255)
                                                                                                                            gtGGTGCGGGTCCGTTTTTCGGGGCTTTTC‑CCCCCCCCCCCC‑CCCCC‑CGT‑GGCTTTTTT‑CCCCCTCCGCCCAGCCGGTAAACCCAGGCGGGGCGCTGAACAGCAAAAACGGCG‑GGGGCGGCATCCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCgg                                                                                                                   <  2:1077508/237‑1 (MQ=255)
                                                                                                                                        gcctttcgggggCTTTTCTCTCCCGCCCCCG‑CCGCC‑AGC‑GGC‑TTTTG‑GCCCACCCC‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATcgc                                                                                                     <  1:422271/229‑1 (MQ=255)
                                                                                                                                          gttttCGCGGTTTTTCCCTTCCGCCCCCGCCCCCC‑GGG‑GGC‑TTTTC‑GCCCACCCC‑ACAGCGGTAAAAACCAAGCGGGGCGCTGAACAGAAAAAGCGGCA‑GGGGGGGCATTCCCGGTCC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATcgc                                                                                                     <  2:2149126/236‑1 (MQ=255)
                                                                                                                                          cGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGGGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGGTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATAATcccc                                                                                                    >  1:1835459/1‑238 (MQ=255)
                                                                                                                                          cGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGGAC‑CACCGCCAGCA‑CGAAAATAATCCCGGGGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGGTACGCACGTCATGGGCGATATCGCCGGTGTCGCTGACGCGGGTGCAGATAATcggc                                                                                                    >  1:1813161/1‑236 (MQ=255)
                                                                                                                                           gTTTCGAGTCTTTTCTCTCCCGCCCCCG‑CCGCC‑AGC‑GGT‑TGTTT‑GCTCACCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATcgccg                                                                                                   <  1:186417/238‑1 (MQ=255)
                                                                                                                                             ttttcggCTTTTTTCTGCCGCC‑CCC‑CCGCCGAGCGGGG‑TGTTTGGCCCCCCCC‑CCAGCCGGTAAAACCAAGAAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATCCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATcgccg                                                                                                   <  2:1367444/233‑1 (MQ=255)
                                                                                                                                             ttCGGGGCTTTTCTCTTCCGCCCCCC‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCACCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCG‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATcgccgccg                                                                                                <  1:1552961/239‑1 (MQ=255)
                                                                                                                                             tgcGAGTCTTTTCCCTGCCCCCCCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCACCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAACCGGCA‑GGTGCGGCATTCCCGGTAC‑CTCCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATcgccgccg                                                                                                <  1:2158030/237‑1 (MQ=255)
                                                                                                                                                     tttccccccccgcccccc‑ccGCC‑CGG‑GGC‑TGTTT‑GCTCACCCG‑CCAGCCGGTAAACCCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGga                                                                                         <  1:397354/229‑1 (MQ=255)
                                                                                                                                                          tctcCCCCCCCCG‑CCCCC‑AGG‑GGC‑TGTTT‑GCTCACCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGagcag                                                                                   <  1:136582/239‑1 (MQ=255)
                                                                                                                                                          cctcccgccccgg‑ccGCC‑AGG‑GGT‑TGTTT‑GCTCCCCCC‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGagcag                                                                                   <  1:1031602/235‑1 (MQ=255)
                                                                                                                                                            ttCCGCCCCCC‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAgcagca                                                                                 <  1:1281667/239‑1 (MQ=255)
                                                                                                                                                             tccccccccccccgcc‑AGC‑GGC‑TGTTT‑GCTCACCCC‑CCACCCGGTAAACCCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCTTTCCCGGTCC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAgcagca                                                                                 <  1:1228632/228‑1 (MQ=255)
                                                                                                                                                              ccgcccccg‑cccCC‑GGG‑GGC‑TTTTT‑GCCCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCagg                                                                               <  1:1864862/239‑1 (MQ=255)
                                                                                                                                                                 cctccg‑ccGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATAATCGCCCCCGCGGGGGAGAGCAGCagggaa                                                                            >  1:1761492/1‑239 (MQ=255)
                                                                                                                                                                    ccg‑ccgCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGGTACGCACGTCATGGGCGATATCGCCGTTGTCGCTTACGCGGGTGGCGGTAATCGCCGCCGCGGTGGGGAGCCGCcgggaaggg                                                                         >  1:455799/1‑239 (MQ=255)
                                                                                                                                                                                   gC‑TGTTT‑GCCCACCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCGTTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGccac                                                              <  1:1693549/238‑1 (MQ=255)
                                                                                                                                                                                            gCTCACCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAACCGGCG‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGt                                                      <  1:1898527/239‑1 (MQ=255)
                                                                                                                                                                                                     cccAGCCGGTAAAACCAAGCAGGGCGCAGAAAAGCAAAAACGGCG‑GGTCCGGGGTTCCGGGTAC‑CGCCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATg                                              <  1:1094853/238‑1 (MQ=255)
                                                                                                                                                                                                      ccAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTg                                                                    >  1:1841197/1‑216 (MQ=255)
                                                                                                                                                                                                         gCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGCCATGGGCGATATCGCCGTTGTCGCt                                                                                                                          >  1:524437/1‑159 (MQ=255)
                                                                                                                                                                                                          ggacgaaacCCAAGCGGGGCCCAAAACAGCAAAACCGGCA‑GGGGGGCCATCCCCGGTCC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtca                                          <  2:501841/233‑1 (MQ=255)
                                                                                                                                                                                                          ccGTTAAACCCAAGCAGGGCGCAGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtca                                          <  2:546455/238‑1 (MQ=255)
                                                                                                                                                                                                           cGGTAAACCCAGGCGGGGGGAGGACCAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CGCCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCAGGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcat                                         <  2:75108/238‑1 (MQ=255)
                                                                                                                                                                                                           cGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcatc                                        <  1:1268654/239‑1 (MQ=255)
                                                                                                                                                                                                           cGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcat                                         <  1:946641/238‑1 (MQ=255)
                                                                                                                                                                                                            ggTAAAACCAAGCAGGGCGCTGAACAGCAAAACCGGCA‑GGTGCGGCTTTCCCGGTCC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcatca                                       <  1:1510168/239‑1 (MQ=255)
                                                                                                                                                                                                                 acccAAGCAGGGCGCTGAACAGAAAAAACGGCA‑GGGGGGGCTTTCCCGGTCC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGcaca                                  <  2:126818/237‑1 (MQ=255)
                                                                                                                                                                                                                 acacAAGCAGGGCCGTG‑ACAGAGAAAATGGGC‑GGGGGGGCGCTCCCGGTGCACACCGCCCGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGAAGCTGGTTACGAACGTCAGGTGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGcaca                                  <  2:791489/236‑1 (MQ=255)
                                                                                                                                                                                                                  aCCAAGCAGGGCGCTGAACAGCAAAACCGGCA‑GGTGCGGCATTCCCGGTCC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACAt                                 <  1:135460/239‑1 (MQ=255)
                                                                                                                                                                                                                   ccAAGGAGGGCGCAGAACAGGAAAACCGGCA‑GGGGCGGCATTCCCGGTCC‑CCCCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGGGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATa                                <  1:2104253/239‑1 (MQ=255)
                                                                                                                                                                                                                   ccAAGCAGGGCGCTGAACAGCAAAAAGGGCG‑GGGGGGGCATTCCCGGACC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGGGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATa                                <  1:1018372/239‑1 (MQ=255)
                                                                                                                                                                                                                   ccAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATa                                <  1:1325315/239‑1 (MQ=255)
                                                                                                                                                                                                                   ccAAGCAGGGCGCTAAACAGCAAAAGCGGCA‑GGGGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATa                                <  1:1573778/239‑1 (MQ=255)
                                                                                                                                                                                                                    caggCAGGGCGCGAAACAGAAAAGCCGGAC‑GGGGCGGATTCCCCGGTCC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATAc                               <  2:1761492/236‑1 (MQ=255)
                                                                                                                                                                                                                        cAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGGGGAGAGGAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGGCATCAGCACATAct                              >  1:856444/1‑236 (MQ=255)
                                                                                                                                                                                                                           ggCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGGCATCAGCACATa                                >  1:501841/1‑231 (MQ=255)
                                                                                                                                                                                                                           ggCGCTGAACAGCAAAAACGGCA‑GGGGCGGCATTCCCGGGAC‑CACCGCCAGCA‑CGAACAAAATCCCGGGGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCCCGGCAGGGGCGGAATCGCCGGTGTCGCTGACGCGGGGGCCGATAAATGCCGCCCCCGGTGAGGGGAGCAGGGGAGGGGACTGGGCCACCAAGGCGGCGCCGGCGGGCATCCGCACCAACCGCTggg                        >  2:590768/1‑238 (MQ=255)
                                                                                                                                                                                                                            gcagagaaaggCAAAACCGGCG‑GGTGAGGCATTCCCGGTAC‑AACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCGCCAGGCCGTCGCCGATGGTCATCAGCACATActgctg                          <  2:1201331/226‑1 (MQ=255)
                                                                                                                                                                                                                              ggtGAACAACAAAAACGGCA‑GGGGCGGCTTTCCCGGTCC‑CGCCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAgg                     <  2:1619253/237‑1 (MQ=255)
                                                                                                                                                                                                                                    ccgCAAAACCGGCC‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCAt               <  1:2043078/237‑1 (MQ=255)
                                                                                                                                                                                                                                     aGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCCTCAGCACATACTGCTGGAAGGCAGCATc              >  1:1392407/1‑239 (MQ=255)
                                                                                                                                                                                                                                     aGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGGGGCGGTGTAGAGCACCCACGGGCTTGCCAGCAGCCGGGTACGCACGTCATGGGCGGGATCGCCGGTGTCGCTGGCGCGGGGGGCGATAATCGCCCCCCCGGGGGGGGGCCGGCGGGGAGGGGTCTGGGCCCCCCAGCCCGCGCCGGGGGTCACCCGCACCAACCGCCGGGAGgcaccaa               >  2:629264/1‑237 (MQ=255)
                                                                                                                                                                                                                                        aaaacCGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATc              <  1:1680813/236‑1 (MQ=255)
                                                                                                                                                                                                                                          cacgggCG‑GGGGCGGCCTCCCCGGTCC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGGGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGgcgc         <  2:643663/235‑1 (MQ=255)
                                                                                                                                                                                                                                            aCGGCA‑GGGGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGGGGAGGGCAGCCGGGAAGGGAGCTGCGCCACCAGGCCGCCGCCGGGGGTCCACCGCCCAAAACGCTGGAAGGGCGCATCGgcgcc        >  2:2052517/1‑237 (MQ=255)
                                                                                                                                                                                                                                             cgtcA‑GGTGGGGCATTCCCGGTAC‑CGCCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGGTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCt        <  2:1813161/234‑1 (MQ=255)
                                                                                                                                                                                                                                                 ggggTGGGGCTTCCCGGGTAC‑CCCCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAgg    <  2:1648029/236‑1 (MQ=255)
                                                                                                                                                                                                                                                 aggttGCGGCAGGCCGGGGAC‑CGCCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGGTCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGAGGATAATCGTCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAgg    <  2:2025850/234‑1 (MQ=255)
                                                                                                                                                                                                                                                 a‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGt   <  1:2052517/238‑1 (MQ=255)
                                                                                                                                                                                                                                                  gggTGCGGCTTTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGt   <  1:1613289/237‑1 (MQ=255)
                                                                                                                                                                                                                                                     tGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGtt  <  1:629264/236‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                             
CTGGGTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCG‑CCGCC‑AGC‑GGC‑TGTTT‑GCTCATCCG‑CCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCA‑GGTGCGGCATTCCCGGTAC‑CACCGCCAGCA‑CGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGTT  >  NC_007779/249300‑249773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑