| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,478,899 | T→C | 8.5% | L681P (CTC→CCC) | Y75_RS07430 → | DUF2773 domain‑containing bactofilin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 1,478,899 | 0 | T | C | 8.5% | 397.4 / 3.4 | 143 | L681P (CTC→CCC) | Y75_RS07430 | DUF2773 domain‑containing bactofilin |
| Reads supporting (aligned to +/- strand): ref base T (87/36); new base C (2/12); total (91/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.14e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 144 total aligned reads displayed.
GTGCATTAATTAGTTGGGATAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAA > NC_007779/1478662‑1479134 | gTGCATTAATTAGTTGGGATAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAACAGGAAtct > 2:1359855/1‑238 (MQ=255) gCATTAATTAGTTGGGTTAAATTTATCGATGTTGTAGTGAATGATTAACAGCAGAACTTGTTTCGCACTGATATTTTGGTGATGCTTTTTCTGAGGCAGGAAATCAGTTCCCGTGTGTAAATTGAAGAAGC‑CTTACGTGTTTGTTATGCACTAGACCTCGATGCGTTATCACAACTTGATGTACTGGCCAG‑ACATCTGGATC‑GTACATGGTGGAGTACACTGGCGAAAAGCAATCGca < 2:1506097/238‑1 (MQ=255) ttGGGATAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGt > 1:1288853/1‑239 (MQ=255) tGGGATAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCCATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGt > 1:625339/1‑238 (MQ=255) gATAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑g < 1:1622492/238‑1 (MQ=255) aTAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑Ggc > 1:1053671/1‑239 (MQ=255) aTAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTAACATTTTTCAAGTT‑‑C‑Ggc > 1:1478411/1‑239 (MQ=255) ttACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGCAGTACACGGGCGAAAAGCAATCGCACATTTTTCAAGTT‑‑C‑GGCGC‑ACt > 1:1174322/1‑239 (MQ=255) ccGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTaac > 1:1340841/1‑239 (MQ=255) ccGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCAGATGCGTGAGCACAACTGGATGTACTGGAAAA‑ACAACCGGATC‑GCAAATGGTGGGGTACACTGGCGAGAACCAAACTAACATTTTGCAAATT‑‑G‑GGCGC‑ACtttaa > 2:791524/1‑236 (MQ=255) ccGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGAAGGTTTATGACGC‑GTTACGGGTTTATTATGCGCTAGACACCCATGCGTTAGGCCAACTGGATGTACAGGCAAA‑ACAACCGGCTC‑TTATATGGTGGCGTCAACTGGCGAAAAGAAATCCCACATTTTTCAAGTT‑‑T‑GGCGC‑ACTTaa > 2:1343622/1‑238 (MQ=255) gtttttgttCTCGAGGATTTACAGAAAAACACGCAACGCAGTGATATTGGGGGGAAGTTTTTTCTGGGGAAGGAAACCGGTTCCCGTGCGCAGTTTGACGAAGC‑GTTCCGTGTTTTTTATGCCCTAGCCCCCGTTGTGTTAGCACAACTGGATGTACTGGAAAA‑ACAACCGTATC‑GTATTTGGGGGAGTACCCTGGCGAAAACCAATCTCACTTTTTTCAAGTT‑‑C‑GGCGC‑ACTTaacaa < 2:1539559/235‑1 (MQ=255) gttgttCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAAcc > 1:1564619/1‑238 (MQ=255) aaTTAAAGCAAACCACGCCCCGCAATGATTTTTGGGCGAAGTTTTTCCTGAGGAAGGAAAACATTCCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTGGCCCCCGATGCGTTAACACAACTGGATTTACGGGAAAA‑CCACCCGGTTC‑TTAAATGGTGGAGAACCCTGGCAAAACGCAACCCCCCATTTTTAAAGTC‑‑C‑GGCGC‑ATTTAACACCCGCCACACACCGcc < 2:383687/238‑1 (MQ=255) aTTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGcat > 1:1202105/1‑236 (MQ=255) cAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGt > 1:1106668/1‑236 (MQ=255) aaaCACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTg > 1:1828672/1‑238 (MQ=255) aaaCACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGATCCCGTGCGCAGGTTGAAGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTAAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTgg > 2:1560872/1‑239 (MQ=255) ccccacgcAATGATATTGGGGCAAGGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGCCCCCGATGCGTTAGCACAACTGGATGTACGGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCAAAAAGCAATCTCACATTTTTCAATTC‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCa < 1:369444/237‑1 (MQ=255) gccacgcAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGGTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGAGGTAGCACAACTGGCTGTACTGGCAAA‑ACAACAGGAGC‑GTATATGGTGGAGTACACGGGCGAAAAGCAATCACACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTCACAACCGCCACACCCCGCCTCCAGTACTGGCGGAAg > 2:1522645/1‑239 (MQ=255) ccccgcAATGATTTTGGGGCGAAGTTTTTTCTGAGGCAGGAAACCAGTTCCCGTGCGCAGGTTGACGAGGC‑GTTACGTGTTTATTAGGCACTGGACCCCGATGCGTTAGCACAACGGGATGTACTGGCAAA‑ACACCCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCATTCTCACATTTTTCAAGTT‑‑G‑GGCGC‑ATTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGa < 1:1212229/236‑1 (MQ=255) cacgcAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGaa > 1:797243/1‑239 (MQ=255) cgaaaTGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGCCCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑‑‑‑‑‑‑‑GTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATccc < 1:497742/236‑1 (MQ=255) aaTGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGa > 1:606740/1‑239 (MQ=255) tatTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACATTTCCCGTGCGCAGTTTGCCGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTCCACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATccc < 1:1443940/238‑1 (MQ=255) ttttGGGCGATGTTTTTTCGGGGGCAGAAAAACGGTTCCCGGGCGCGGGTTTACGAATC‑TTTACTTGTTTTTTATGCACTAGACCCCGGTGCGTTGGCAAAACTGGATGTACGGGAAAA‑ACAACCGGATC‑GTATAGGGGGGAGTACACGGGCGAAAAGCAATCTCACTTTTTTCAGGTC‑‑C‑GGGGA‑ATTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATccc < 2:1865988/236‑1 (MQ=255) atTTGGGCGAAGTTTTTTTTGAGGCAGAAAAACGGTTCCCGTGCGCAGGTTGACGAAGC‑GTTCGGTGTTTATTATGCACTAGCCCCCGATGCGTTAGCACAACTGAATGTACTGGCAAA‑ACAACCGGATC‑TTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑CCTTAACACCCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGa < 1:2014526/239‑1 (MQ=255) ggggCTAAGTTTTTTCTAAGGAAGGAAAACAGTCCCCTTGCGCAGGTTGACGAAGC‑TTTACGTTTTTATTATCCACAAGACCCCGTTTCGTTGGCACAATTGAATGTATTGACAAA‑ACAACCGAATC‑GTATATGGTGGATTACACTGTCAAAAACCAATCCCACATTTTTCAAGTT‑‑C‑GGGGC‑ATTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAgtg < 1:1258245/238‑1 (MQ=255) gggCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGC‑GCAGAAATTGATCCCGAgtggt > 1:1968894/1‑239 (MQ=255) gCGAAGTTTTGTCTGAGGCAGGAAAACAGTTCCCGTGCGTAGGTTGACGAAGC‑GTTACTTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTTGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAAACTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCAAACACCGCCATCAGTACTGGAGGCCGACATGGATcaccacgggtc > 2:1476798/1‑229 (MQ=255) ttCTGGGGCAGAAAAACAGTTCCGGTCGGCAGGTTGA‑GAAGCTGTTACTGTTTTATTAAGCACTAGCCCCGGAGGGGTTAGCACAACTGGATGTATTGGAAAA‑AAACCCGTATCTGTA‑AGGGGGGATTACACTGGCGAAAATAATCCTCACTTTTTTAAATTC‑‑C‑GGCAA‑ATTAAACACCCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCg < 2:878660/239‑1 (MQ=255) gaaaaaCATTTCCCGTGCGCAGGTGGAAGAAGC‑TTTACGTGTTTATTATGCACTAGACCCCGATGCTTTAGCACAACGGGATGTACGGGAAAA‑ACACCCGGATC‑TTATAGGGGGGAGTAACCTGGCAAAAAGCAATCTCACATTTTTAAAGTC‑‑G‑GGCGC‑ACTTAACACCCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGaataat < 2:2055933/236‑1 (MQ=255) aGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCCGCAATTGATCCCGAGTGGCGGATTGTGGCCATGAATAATCCCCGgtt > 2:628836/1‑239 (MQ=255) cccGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCa > 1:104198/1‑239 (MQ=255) gcgcAGGTTGAGGAAGG‑GTTACGTGTTTATTATGCAAGAAACCCGGATGATTGAGCACAACTGGAGGAAAAGAAAAA‑AAAACCAGATC‑GTATATGGTGGAGTACCCTGGCGAAAAGAAAGCGCACATTTTTC‑AGTT‑‑CGGGCGC‑ACTAAACACCCGCCGCACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGa < 2:1870058/239‑1 (MQ=255) ggcAGGTGGACGAGCC‑GTTACGTTTTTTTTATGCACTAGACCCCGATGCGTTAGAACACCTGGATGTACTGGAAAA‑ACAGCCGGTTC‑GTATATGGGGGAGTACACGGACAAAAAGAAATCTCACATTTTTAAAGTT‑‑C‑GGCGC‑ATTTAACACCCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGa < 2:836649/237‑1 (MQ=255) cgcggtttGACGAAGG‑GTGTCGTTTTTATTATGCACAAGACCCCGAGGCTTTAGCACACCTGGATGTACTGGAAAA‑ACACCCGGTTC‑GTATATGGTGGAGTACACTGGCAAAAAGCAATCTCCCTTTTTTAAATTT‑‑C‑GGCGC‑ATTTAACACCCGCCACACACCGCCTGCAGTACTGGC‑GCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGAt < 2:1968894/232‑1 (MQ=255) cgcAGGTTGACGAGGC‑TTTGTGTGTTTATTATGCCCAAGACGCCTAGGCGTTAGCACAACGGGATGAAGTGAAAAA‑ACAACGGGATC‑GTATTTGGGGGGGAACCCGGGCAAAAAGAATTCCATCTTTTTTAAAGGT‑‑G‑GGCGC‑ATTTAACACCCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGAATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGa < 2:432302/238‑1 (MQ=255) cgcAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATc > 2:74974/1‑192 (MQ=255) cgcAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATc < 1:74974/192‑1 (MQ=255) gcAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATg > 1:559158/1‑239 (MQ=255) cAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGa > 2:117497/1‑236 (MQ=255) cAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGa < 1:117497/236‑1 (MQ=255) cAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGt > 1:907188/1‑239 (MQ=255) aGC‑GTTACGTGTTTATTATGCCCTAGCCCCCGATGCGTTAGCACAACTGGATGTACTGGAAAA‑ACACCCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCg < 1:1359855/238‑1 (MQ=255) c‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAg > 1:941543/1‑238 (MQ=255) c‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAg > 1:893367/1‑238 (MQ=255) gtttACGGTTTTATTAGGCACGGGACCCCGATGCGTTAGCACACCTGAATGTACTGGAAAA‑ACAACCGGTTG‑GTATATGGTGGAGAACACTGGCGAAAAGCAATCCCCCTTTTTTAAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGtt < 2:1949952/211‑1 (MQ=255) ttattaTGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTg > 2:1820121/1‑239 (MQ=255) attatGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGGTGAAACGTGa > 1:1260625/1‑238 (MQ=255) attatGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGa > 1:1850711/1‑238 (MQ=255) cACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGGGGCGGTAACGGGAACCTTTg > 2:377805/1‑239 (MQ=255) tAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGGTC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTg > 1:1085471/1‑239 (MQ=255) tAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTg > 1:1221401/1‑239 (MQ=255) gACCCCGATGCGTTAGCACAACTGGCTGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAACGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATc > 1:643000/1‑154 (MQ=255) gACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGt > 1:799821/1‑189 (MQ=255) gACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGc > 1:425529/1‑239 (MQ=255) cGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTag > 1:974507/1‑239 (MQ=255) cGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGGATTAAAGGCGAGGCTGAAACGTGATCCTTTTCTGGCGTTag > 2:548680/1‑239 (MQ=255) cGATGCGTTAGCACAACTGGATGTACTGGAAAA‑ACACCCGGATC‑TTATTTGGTGGATTACACTGGCGAAAAGAAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACACCCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTag < 1:377805/239‑1 (MQ=255) tGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGAtt > 1:217480/1‑160 (MQ=255) ttAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGAGTCCGAATGGGGGATTGTGGCGATGAATAATCCCCGTTTTCCAGGTGATGTATTAAAGGCGAGGCTGAAACGGTGTCACTTGTTGGCGTTAGAGCTTGt > 2:15929/1‑239 (MQ=255) acaACGGGATGTACTGGAAAA‑ACAACCGTTTC‑TAATATGGTGGAGTACACTGGCGAAAAACAATCCCCCATTTTCCAAGTT‑‑C‑GGCGC‑ATTTAACACCCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAAcc < 2:1221401/239‑1 (MQ=255) aaaCTGGAAGTACTAGCAAACACAACCGGATG‑TTATATGGTGGAGTCCTGT‑GCCAAAAGACAAC‑CCCATTTTTTAAGTTTAC‑GCCGA‑TGTAACCACCCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAAcc < 2:425529/238‑1 (MQ=255) actgggATGTACGGGCAAA‑ACACCCGGATC‑GTATATGGGGGAGTACACTGGCAAAAAGCAATCCCACATTTTTCAGGTT‑‑G‑GCCGC‑ATTTAACAACCGCCACACACCGCCTGCAGTACTggc < 2:529493/117‑1 (MQ=255) cTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGa > 1:1033304/1‑239 (MQ=255) cTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGAGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGa > 1:2093391/1‑239 (MQ=255) ggATTTACTGGAAAA‑ACAACCGGTTC‑GTATATGGGGAAGTACACGGGCGAAAAGCAATCGCACATTTTTCAAGTC‑‑C‑GGCGC‑ACTTAACACCCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAAc < 2:1033304/239‑1 (MQ=255) gATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTaacaa < 1:1394884/89‑1 (MQ=255) aCTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAAtt > 1:529493/1‑121 (MQ=255) aCTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGa > 2:2035589/1‑171 (MQ=255) aCTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGAtt > 2:368943/1‑239 (MQ=255) aCTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGGTTTCCAGTTGATGTATTAAAg > 1:2087552/1‑181 (MQ=255) aCTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACGGGCGAAAAGCAATCTCACATTTTCCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGa < 1:2035589/171‑1 (MQ=255) gATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGgc > 1:1553698/1‑239 (MQ=255) gTATATGGGGGAGTACACTGGAGAAAAGCAATCTCACTTTTTTCAAGTT‑‑G‑GGCGC‑ATTAAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCtt < 2:2100980/239‑1 (MQ=255) tataTGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTa > 1:2100980/1‑239 (MQ=255) ggtggAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGt > 2:1575554/1‑196 (MQ=255) ggtggAGTACACTGGCGAAAAGCAATCTCACATTTTCCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGt < 1:1575554/196‑1 (MQ=255) gtggAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTa > 2:324694/1‑239 (MQ=255) tggAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTaa > 1:1985881/1‑239 (MQ=255) ggAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAg > 1:699878/1‑239 (MQ=255) aGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ATTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGa < 2:174777/140‑1 (MQ=255) aGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGa > 1:174777/1‑140 (MQ=255) aGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTa > 1:413003/1‑144 (MQ=255) aGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGa > 2:880058/1‑238 (MQ=255) aGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGAc > 1:777628/1‑239 (MQ=255) aGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCACGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTTAAACGTGATCCTTTGCTGGCTTTAGAGCTTGTTAACCCTGAACTGGTTTTAGTCCGCCAGCTGGCACTTAACGGTAAGAc > 2:929078/1‑239 (MQ=255) tACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGATGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGAcgc > 2:923562/1‑239 (MQ=255) cacTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGAcgcgc > 1:294160/1‑239 (MQ=255) acgggCAAAAAGAAATCCCACATTTTT‑AAGGT‑‑C‑GGCGCAACTAAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGAcgcgcg < 2:699878/236‑1 (MQ=255) acTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGGGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGAcgcgc > 2:863126/1‑238 (MQ=255) ccgtcGAAAATCTATCTCGTATTTTCAAGGTG‑‑C‑GGCGA‑TCTAAACAACGCCCACTCCCCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGATGGTGAGACGTGATCCTTTGCTGGCGTTAGCGCTTGTTAACCCTGGACTGGAGTTAGACCGCCAGCTTGCGCAGAACGGTAAGAggtgcgt < 2:1106668/235‑2 (MQ=255) gcaaaaaGCACCCCCACTTTTTTAAAGTT‑‑C‑GGCGC‑CCTAAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATcc < 2:1288406/113‑1 (MQ=255) caaaaaGCAATCTCCCATTTTTCAAGTG‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAAt < 1:180251/236‑1 (MQ=255) cGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑CCTTAACAACCGCCACACACCGCCTGCACTACTGGCGGCAGACATTGATCCCGAGTGGGGGATTGTTGCGTTGAATAATACCCGTTTTCCAGTTGATGGATTAACAGCGGGGCTGCAACGTGCTCCTTTTCTGGCGTTAGAGTTTGTTAACCCTTTACTGGATTTAATCCACCAGCTGGCGCTTAGAGGTAAGACGCGCGCAATa > 2:1932502/1‑239 (MQ=255) cGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGGATTAAAGGCGAGGCGGAAACGTGATCCTTTGCTGGCGTTATAGCTTGTTAACCCTGCACTGGATTTAGTCCGCCAGCTGGCGCTAAACGGTAAGACGCGCGCAAt > 1:1912607/1‑238 (MQ=255) aaaaGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACg > 2:751198/1‑239 (MQ=255) aTCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCa > 1:1288406/1‑116 (MQ=255) aTCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACAACGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACaa > 1:65804/1‑239 (MQ=255) | GTGCATTAATTAGTTGGGATAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGC‑GTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAA‑ACAACCGGATC‑GTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTT‑‑C‑GGCGC‑ACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAA > NC_007779/1478662‑1479134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |