Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 1,986,321 T→C 13.2% S296G (AGC→GGC)  Y75_RS10005 ← arabinose ABC transporter ATP binding protein AraG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077791,986,3210TC13.2% 259.6 / 2.6 109S296G (AGC→GGC) Y75_RS10005arabinose ABC transporter ATP binding protein AraG
Reads supporting (aligned to +/- strand):  ref base T (21/69);  new base C (9/8);  total (30/79)
Fisher's exact test for biased strand distribution p-value = 1.88e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 109 total aligned reads displayed.

ACCGTTGTTGATTACACAACCGCCGAGCACATGTTTACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTCCA  >  NC_007779/1986088‑1986553
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                           
cccGTTGTGAATTCCACAACCGCCGGGCACATGTTTACGTCTGGCCCTGATTTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTAcgcc                                                                                                                                                                                                                                        <  2:488988/238‑1 (MQ=255)
    ttgttgATTACACAACCGCCGAGCACATGTTTACGTCTGGCACTGATGTTGATATTGTCACGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGTC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTAcgccccgc                                                                                                                                                                                                                                    <  1:810078/239‑1 (MQ=255)
     tgttgATTACCCAACCGCCGAGCACATGTTTACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTAcgccccgc                                                                                                                                                                                                                                    <  1:682366/238‑1 (MQ=255)
         gATTACACAACCGCCGAGCACATGTTTACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTa                                                                                                                                                                                                                               <  1:2118624/239‑1 (MQ=255)
            tACACAACCGCCGAGCACATGTTTACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGTCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGGTTACGGATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGGGCTTTGCGTCCCCCC‑CCACCTG‑TC‑CTTCATGTGATCGCCACaccccgccccctcc                                                                                                                                                                                                                             >  2:1472428/1‑234 (MQ=255)
                   ccgccgACGACATGTTTACGTCTGGCACTGATGTTGATATTGTCGCGAGCGGGGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCaaa                                                                                                                                                                                                                     <  2:951107/239‑1 (MQ=255)
                   acgcctAGAACGTGTTTCGGTCTGGCACTTGTGTTGTTACGGTCGCGCACGGAGTGCTCGGGAATAATGCCTTCCTCTTTGCGATTTTCCGGGCAGGGCAT‑CATGCCTGCGGCAATGGCGTGGCCCGGTTTACGAATATCGTCCGGCTGTTGGTCGATATAAACCAGACCGGC‑GGTGATTAGCTTCCCGCC‑AAACATC‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCaaa                                                                                                                                                                                                                     <  2:183769/238‑1 (MQ=255)
                      ccgAGCACATGTTTACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGGGATTTGCGGTCCCCC‑AAACATG‑CC‑CTTTATTTATTCGCTACCCCCCCCCCCCACCAGACCaaaaa                                                                                                                                                                                                                   >  1:1064851/1‑236 (MQ=255)
                      ccgAGCACATGTTTACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGGTGGGCGATATAAACCTGACCGGCGGGTGTTTTCGGCCCCCCC‑CAAC‑TG‑CC‑TTTCATTTATTTCCCTCTCCCCGCCCCCAccccacccaaaa                                                                                                                                                                                                                   >  2:2124797/1‑228 (MQ=255)
                           cacaTGTTTACGTCTGGCCCTGATGTTGATATTGTCGCGAACGGATGGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGAAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATACGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCca                                                                                                                                                                                                            <  2:440245/238‑1 (MQ=255)
                           cacaTGTTTACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCca                                                                                                                                                                                                            <  2:1843730/238‑1 (MQ=255)
                           caaaTGTGTCCGTCTGGCACTGATGTGTGTATTGTCGCGAGCGGGGGGCCCGGGAATAGTGCCTGCCGCTTTGCGTTCTTCCGGGCAGGGCAT‑CATGCCTGGGGCAATGGCGTGGGTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCca                                                                                                                                                                                                            <  2:73509/235‑1 (MQ=255)
                            actgttttCCGTCTGCCACGGAGGTTGTAATGGTCGCGAACGGAGTGCACGCGAATAATGCCTTCAGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCGGCGCCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGCCCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCca                                                                                                                                                                                                            <  2:1613192/232‑1 (MQ=255)
                            acaTGTTTACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCcaac                                                                                                                                                                                                          <  1:223670/239‑1 (MQ=255)
                                 tttACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTAcgcc                                                                                                                                                                                                                                        <  1:974484/206‑1 (MQ=255)
                                  ttACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAAttt                                                                                                                                                                                                     <  1:1931955/238‑1 (MQ=255)
                                        cTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGGGGTTTGTGTCCCCCC‑ACACACGCCC‑TTTATTTAATTTCCTCCCCCCCGCCCCCACC‑GAACCAA‑CA‑ACCccacaaaattccccc                                                                                                                                                                                               >  2:634105/1‑229 (MQ=255)
                                          ggCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGGTTTTCGGCCCGCC‑AAACCTG‑CC‑TTTCATTAATTTGCTACGCCCCCCCCCCTCCAACCCAAACCA‑CCCCACCAATTTccccatcc                                                                                                                                                                                             >  1:1495791/1‑236 (MQ=255)
                                          ggCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGGGATTTTGGTCCCCCC‑AAAAATG‑CCGTTTCATAAATT‑GCTACCCCCCCCCCCCCCCCACCCAAA‑CACCCCCAACAATTTtacccca                                                                                                                                                                                              >  2:2060088/1‑235 (MQ=255)
                                            cACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTa                                                                                                                                                                                                                               <  1:269618/204‑1 (MQ=255)
                                                  tGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGcc                                                                                                                                                                                    <  1:2154120/239‑1 (MQ=255)
                                                  tGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGcc                                                                                                                                                                                    <  1:2064132/239‑1 (MQ=255)
                                                  tGTTGAGATTGTCGCGACCGGAGTGCACGGGAAAAATGCCTTCCGC‑TTCCGATCTCCCGGGCAGACCAT‑CTTGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATACCGATCGGCTGTTGGTCGATTTAACCCTGCCCGGC‑GGTGATTTGCGTCCCGCC‑ACACATC‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGcc                                                                                                                                                                                    <  2:577704/238‑1 (MQ=255)
                                                   gTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCTTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAAAATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAAttt                                                                                                                                                                                                     <  1:761228/221‑1 (MQ=255)
                                                         atTGTCGCGACCGGAGGGCACGGGAATAATCCCTTCCGCTTGGCGATCTTCCGGGCAGAGAAT‑CAGGCCTGCGGAAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTa                                                                                                                                                                             <  2:1019890/239‑1 (MQ=255)
                                                           tGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGGTTTTCGTCCCGCC‑CAACATG‑CC‑TTTCCTTAATTTGCCACGCCCCGCCCCTCCCACACCCAA‑CA‑ACCCAACAATTTCACCCCTGCGAACccccccacctttt                                                                                                                                                                           >  1:1180772/1‑230 (MQ=255)
                                                                  aaCGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCCCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCCACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAAACGCCCGACTTATTTGCgga                                                                                                                                                                     >  1:626159/1‑236 (MQ=255)
                                                                   aCGGCGTGCACGGGAAGAATGCCTTCCGCTTTGCGATCTTCGGGGCAGGGCAC‑CATGCCTGCGGAAATGGCGTGGCTCGGTTTACGAATATCGTTGGGTGGTTGGTAGATATAAACCTGCCCGGC‑GGTGATTGGCGTCCCCCC‑AAACATG‑CT‑TTTCATTAATTCGCCACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACGGCGACCCGCCAGACTTATGGGCGTacg                                                                                                                                                                   <  2:223397/239‑1 (MQ=255)
                                                                   aCGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTacg                                                                                                                                                                   <  1:2042684/239‑1 (MQ=255)
                                                                    cGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCGGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTacgc                                                                                                                                                                  <  1:423832/239‑1 (MQ=255)
                                                                           cACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCt                                                                                                                                                            <  1:271152/238‑1 (MQ=255)
                                                                           cACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CAGGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATAGCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATGAATTCGCGACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCGCCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCt                                                                                                                                                            <  1:515277/238‑1 (MQ=255)
                                                                           aacaggAAAAAGGCCTTCGGCTTTGCGATCTTCCGGGCAGAGCTT‑CAGGCCTGGGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGCTTGGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCt                                                                                                                                                            <  2:1863034/234‑1 (MQ=255)
                                                                            tcGGGAATAATGCCTTCCGCTTTGGGATTTTCCGGGCAGAGCAT‑CATGCGTGCGCCAATGGGGTGGCTCGGTTTACGAATATCGATCGGCTTTTGGTCGATAAAACCCTGCCCGGG‑GGTGTTTTGCGTCCCGCCAAAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCt                                                                                                                                                            <  2:1990696/237‑1 (MQ=255)
                                                                             cGGGCATAATCCTTTCCGCTTTGCGTGTTTCCGGCCGGAGCAT‑AGTGCCTGCGGCATTGCGGGGGGCCGGTTTACGAGTATCCATCGTTGTTTGGTCAATATAAACCGTCCCGGC‑GGTGCTTTCCGCCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGt                                                                                                                                                         <  2:1092117/239‑1 (MQ=255)
                                                                                gAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTAt                                                                                                                                                                            <  1:1339331/217‑1 (MQ=255)
                                                                                    aatGCCTTCCGCTTTGCGGTCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCGCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTca                                                                                                                                                 <  1:1305845/239‑1 (MQ=255)
                                                                                    aatGCCTTCCGCTTGGCGATTTTCCGGGCAGAGCAT‑CGAGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGGCCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTCCGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTca                                                                                                                                                 <  2:177993/239‑1 (MQ=255)
                                                                                     atGCCTCCCGCTTTGCGTTGTTCGGGGC‑GTGGATCCAGTCCTGCGGCATGGGCTGGGCTTGGTTTCGGAATTGCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AACCATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTca                                                                                                                                                 <  2:2025956/238‑1 (MQ=255)
                                                                                          ttCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAAAATG‑CC‑TTTCCTTTAATCGCTACGCCCCGCCCCCACCCGAACAAA‑AA‑ACCCAACAAATTTCCCACTGCGGACCGCCACACTTATTTGCGTACGCACCCCCGGGG‑CCTTtaccaca                                                                                                                                            >  1:220290/1‑234 (MQ=255)
                                                                                          ttCCGCTTTGCAATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCAt                                                                                                                                           <  1:122415/239‑1 (MQ=255)
                                                                                           tCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑CAACCTG‑GC‑TTTCATTAATTCGCTACGCCCCCCCCCCACCAGACCCAA‑CA‑ACCCAACCATTTCCCCCCCTCGAACCCCCAGCCTTATTTGCCTACGCACGCCTGGTG‑CTTTcccctggc                                                                                                                                           >  1:1863034/1‑231 (MQ=255)
                                                                                                  tGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑CAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCCACCCGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAAACGCCAGACCTATTGGCGGACGCCCCCCTGGTG‑CCTTCACAGCATCAAGACGt                                                                                                                                   >  1:791161/1‑239 (MQ=255)
                                                                                                     gATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAgg                                                                                                                                <  1:2124797/239‑1 (MQ=255)
                                                                                                          tCCGGGCAGAGCTT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGctc                                                                                                                           <  1:922421/239‑1 (MQ=255)
                                                                                                            cGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGctcct                                                                                                                         <  1:418881/239‑1 (MQ=255)
                                                                                                                   agCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGCCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTCCGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCAt                                                                                                                   <  2:706789/238‑1 (MQ=255)
                                                                                                                          atGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCGTTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACCCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTAcg                                                                                                            <  1:1854351/239‑1 (MQ=255)
                                                                                                                               tGCGGCATGGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGtt                                                                                                       <  1:1548665/239‑1 (MQ=255)
                                                                                                                                  ggCAATGGCTTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTCCGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCCCCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGc                                                                                                     <  1:302693/238‑1 (MQ=255)
                                                                                                                                  ggCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTTTTGGTCGATATAAACCTGCCCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGCCCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGc                                                                                                     <  1:1461437/238‑1 (MQ=255)
                                                                                                                                  ggCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAACCCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTTCCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGc                                                                                                     <  1:2060088/238‑1 (MQ=255)
                                                                                                                                  ggCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTCCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGc                                                                                                     <  1:1162999/238‑1 (MQ=255)
                                                                                                                                             ggCTCGTTTTACGAATATCGATCGGCTGTTGGTCGATATAACCCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGat                                                                                          <  1:1380717/238‑1 (MQ=255)
                                                                                                                                             gccTCGGTTTACGAATATCGTTCGGCTGTTGGTCGATATAACCCTGACCGGC‑GGTGATTTCCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGat                                                                                          <  1:891465/236‑1 (MQ=255)
                                                                                                                                                   gTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCCCCCCCACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAAACGCCAGACTTATTGGCGTACGCACGCCTGGGG‑CCTTCACAGCATCAAAACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCa                                                                                   >  1:172768/1‑239 (MQ=255)
                                                                                                                                                    tttACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCA‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGc                                                                                                     <  1:269691/220‑1 (MQ=255)
                                                                                                                                                             atcgatcgCCGGTTGGTGGATATAAACCTGACCGGC‑GGGGATTGGCGTCCCGCC‑AAACATG‑CC‑TTGCATTAGTTCGCTCCGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGcc                                                                         <  1:204491/239‑1 (MQ=255)
                                                                                                                                                              tcgatcgGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTTGGTCCCCCC‑AAACATG‑TC‑TTTCATTAAGTTGCCACCCCCCCCCCCTACCCGACCAAA‑AA‑ACCCAACAAATTTACACCTCCGAACCGCCCACCTTTATGGCGCACCCACCCCTTGTGCCTTTCCCA‑CACACAGAACTAAGCGCTCCCCGCCCTAACTAAGCCGGTGCCAGCCGTAAATATTGCCaaatgccgctc                                                                         >  2:841346/1‑229 (MQ=255)
                                                                                                                                                              tcgatcgGCTGTTGGTCGATATAAACCTGACCGGC‑GGCGATTTTCGTCCCCCC‑CAAAATT‑CC‑CTTCCTTAATTCCCCACCCCCCCCCCCCCCCCGACCCAA‑CA‑ACCCCACAAATTCACCCCCGCCCAACCCCCCACTTCTTCGCGCACCCACCCCTGGTG‑CTTTCCCAGAACCCAGACGCAAGCCCTCCCCGCCATCACAACGCGTTTGCCCCCCGCAGATATCGCCAACGTCGcccc                                                                         >  2:320687/1‑238 (MQ=255)
                                                                                                                                                                  tcgGCTGTTGGTCGTTATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACGGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGAcc                                                                    <  1:1623969/239‑1 (MQ=255)
                                                                                                                                                                     gCTGTTGGTCAATATAACCCTGCCCGGC‑GGTGATTTGCGCCCCGCA‑AAACATG‑CC‑TTTCATTAATTCGCTCCGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTcgcg                                                                           <  1:35858/229‑1 (MQ=255)
                                                                                                                                                                               gATATAAACCTGACCGGC‑GGTGAATTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTTATTTGCCACGCCCCCCCCCTACCAGACCCAA‑AA‑GCCCAACAAATTCCCCACTCCCAACCCCCCGACTTATTTGCGTACCCCCCCCCGGTG‑CTTTCCCAACATCCAGACGTAAGCGCTCCCCCCCATAACTCCGCGGGTGCCAGCCGGAGATTTCGCCCATGTCGCGCCCCACCCTccctggctctt                                                       >  2:35858/1‑229 (MQ=255)
                                                                                                                                                                                atatAAACCTGACCGGC‑GGTGATTTGCGCCCCCCC‑CAAAATG‑CC‑TTTCATTTATTCGCCACGGCCCGCCCCCTCCCAACCCAA‑CA‑GCCCCACAATTTTACCACCTAGAAACGCCAGACTTTTTTGGGTACGCACCCCCTGTG‑CGTTCACAGCATCAAAACGTAAGCGCCCCTCGCCACACCTACGCGGGTTCCCGCCGTAGATATTGCCCAAGTCGCCCCCCGCCATCCCCAGccccc                                                       >  2:328993/1‑237 (MQ=255)
                                                                                                                                                                                 tataAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCt                                                                                                                                                            <  1:2042855/137‑1 (MQ=255)
                                                                                                                                                                                 tataAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGctc                                                                                                                           <  1:1701545/169‑1 (MQ=255)
                                                                                                                                                                                           aCCGGC‑GGTGATTTTCGTTCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCCCCAGACTTATTGGCGTACGCACCCCTGGGG‑CTTTTACCGCATCAAAACGTAGGCGCTCCTCCCCCTAACt                                                                                                               >  1:1980560/1‑171 (MQ=255)
                                                                                                                                                                                              cgcgggTGATTTGGGTCCCCCA‑ACCCATG‑CT‑TTTCTTTAATTCGCCCCCCCCCGCCCCTACCAGACCAAC‑CA‑TCCCAACATTTTCACCTCTGCGACCCGCCAGACTTATTGGCGTACGCACGCCGGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCa                                         <  2:1495791/235‑1 (MQ=255)
                                                                                                                                                                                                c‑ggTGGTTTGCGTCCCGCC‑AAACATG‑CC‑TTTCCTTAATTCGCCACGCCCCCCCCCTACCAGACCAAA‑CA‑ACCCAACAATTTCACCACTGCGAACCCCCAGACTTATTGGCGTACGCACCCCCGGGG‑CCTTCACAGCATCAAGACCTAAGCGCTCCTCGCCATAACTACGCGGTTTCCAACCGGTGATATCCCCAATGTCCCCCCCGACCAACCCCCGCCCCAACGCCTCGTGGGCAAc                                       >  2:1312459/1‑238 (MQ=255)
                                                                                                                                                                                                c‑ggTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAAc                                       <  1:1260681/238‑1 (MQ=255)
                                                                                                                                                                                                c‑ggTGATTTCCGCCCCCCC‑AAACATG‑CC‑TTTCATTAATTCGCCACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAAc                                       <  1:1085342/238‑1 (MQ=255)
                                                                                                                                                                                                c‑ggTAATTTGCGCCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTCCGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAAc                                       <  1:207305/238‑1 (MQ=255)
                                                                                                                                                                                                        ttGCGTCCCCCC‑AAACATG‑CC‑TTTCATTAATTCCCCACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCCCCCCTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCa                               <  1:2093468/239‑1 (MQ=255)
                                                                                                                                                                                                         tGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CC‑GCCCAACAATTGCACCCCTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCat                              <  1:2158924/239‑1 (MQ=255)
                                                                                                                                                                                                         tGCGCCCCGCC‑AACCATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCCCCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCat                              <  1:541730/239‑1 (MQ=255)
                                                                                                                                                                                                                cGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGctcct                                                                                                                         <  1:1519734/141‑1 (MQ=255)
                                                                                                                                                                                                                cGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGctcct                                                                                                                         >  2:1519734/1‑141 (MQ=255)
                                                                                                                                                                                                                cGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTa                       >  2:734431/1‑239 (MQ=255)
                                                                                                                                                                                                                cGCA‑AAACACG‑CT‑TTTAATAATTTCCCCCCCCCCCGCCCCTACCAGCCCAAA‑CA‑GCCCAACAATTTCCCCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTa                       <  2:220290/239‑1 (MQ=255)
                                                                                                                                                                                                                 gCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTaa                      <  1:734431/239‑1 (MQ=255)
                                                                                                                                                                                                                 ccc‑AAACATG‑CC‑TTTCATTAATTCGCCGCGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCCCTGCGCACCCCCAGGCTTATTGGCGTCCGCCCCCCTGGTG‑GTTTCCCAGCCTCAAGGCGTGGGCCCTCCTCGCCCTAACTACGCGGTTGCCAGCCGGAGATATCGCCAAAGTCGCGCCCGGCCATCGCCTGCCCCAGCGCGTCGTGGTCAACCTTCTGCATATCGGTaa                      <  2:1983606/238‑1 (MQ=255)
                                                                                                                                                                                                                          atccc‑TTTCATTAATTCCCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGtttt               <  1:90535/236‑1 (MQ=255)
                                                                                                                                                                                                                           g‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTg              >  1:667827/1‑238 (MQ=255)
                                                                                                                                                                                                                                tttCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGCTTTGACAt          >  1:2047736/1‑239 (MQ=255)
                                                                                                                                                                                                                                   cATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAAc       >  1:688635/1‑239 (MQ=255)
                                                                                                                                                                                                                                     ttAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAAGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCCGCTGCCTACCGGTAAAGGTTTTGACAAAACg      >  2:1128636/1‑238 (MQ=255)
                                                                                                                                                                                                                                      tAATTCTCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTc    <  1:2132896/239‑1 (MQ=255)
                                                                                                                                                                                                                                      tAATTCGCTCCGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTc    <  1:1534524/239‑1 (MQ=255)
                                                                                                                                                                                                                                      tAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGt     >  2:601840/1‑238 (MQ=255)
                                                                                                                                                                                                                                      tAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTc    <  1:601840/239‑1 (MQ=255)
                                                                                                                                                                                                                                      tAATTCCCTCCGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCCCGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTc    <  1:937173/239‑1 (MQ=255)
                                                                                                                                                                                                                                      caaTTCGCTACGCCCCGCCCCTACCAGACCAAC‑CA‑GCCCAACAATTTCACCACTGCGACCCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTc    <  1:1128636/238‑1 (MQ=255)
                                                                                                                                                                                                                                      acgtccGCCACGCCCCGCCCGTCCCAGACCAGC‑GA‑GCCCAACAGTTTCCCCAGGGCGACCCGCCAGACTTATGGGCGTCCGCCCGCATGGGG‑CTTTCCCGGCATGAAGACGGACGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTc    <  2:644560/234‑1 (MQ=255)
                                                                                                                                                                                                                                       aaTTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTca                                                                                                                                                 <  1:106395/97‑1 (MQ=255)
                                                                                                                                                                                                                                        agtCGCTGCCCCCCGCCCCTACCAGACAAAA‑CA‑CCCCAACAATTCCCCCACGCCGACCCGCCAGACTTATTGGCGGACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTCCa  <  2:2047736/237‑1 (MQ=255)
                                                                                                                                                                                                                                        aTTCGCTCCGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGACCCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTCCa  <  1:893652/239‑1 (MQ=255)
                                                                                                                                                                                                                                        aTTCGCTCCCCCCCGCCCCTCCCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTCCa  <  1:1822173/239‑1 (MQ=255)
                                                                                                                                                                                                                                        aTTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCat                              <  1:1912762/211‑1 (MQ=255)
                                                                                                                                                                                                                                        aTTCGCCACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCCCCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTCCa  <  1:543716/239‑1 (MQ=255)
                                                                                                                                                                                                                                         ttCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTCCa  >  1:1703747/1‑238 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                           
ACCGTTGTTGATTACACAACCGCCGAGCACATGTTTACGTCTGGCACTGATGTTGATATTGTCGCGAACGGAGTGCACGGGAATAATGCCTTCCGCTTTGCGATCTTCCGGGCAGAGCAT‑CATGCCTGCGGCAATGGCGTGGCTCGGTTTACGAATATCGATCGGCTGTTGGTCGATATAAACCTGACCGGC‑GGTGATTTGCGTCCCGCC‑AAACATG‑CC‑TTTCATTAATTCGCTACGCCCCGCCCCTACCAGACCAAA‑CA‑GCCCAACAATTTCACCACTGCGAACCGCCAGACTTATTGGCGTACGCACGCCTGGTG‑CTTTCACAGCATCAAGACGTAGGCGCTCCTCGCCATAACTACGCGGTTGCCAGCCGTAGATATCGCCAATGTCGCGCCCGACCATCGCCTGCACCAGCGCGTCGTGGTCAACCTGCTGCATATCGGTAAAGGTTTTGACATAACGTCCA  >  NC_007779/1986088‑1986553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑