Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_007779 | 2,152,044 | A→C | 18.9% | V360G (GTG→GGG) | yegI ← | protein kinase YegI |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_007779 | 2,152,044 | 0 | A | C | 18.9% | 120.5 / 2.1 | 76 | V360G (GTG→GGG) | yegI | protein kinase YegI |
Reads supporting (aligned to +/- strand): ref base A (45/14); new base C (6/11); total (51/25) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.84e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TACGCTTTGCTTGTCAGACTGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCGCTACCCACGCTTTAGCCGTCGGACGCCCGGTTGCCACGCCACTTTCCG > NC_007779/2151810‑2152281 | tACGCTTTGCTTGTCAGACTGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGCTT‑ATGAAGCCCTCACCa > 2:1627583/1‑238 (MQ=255) tttGCTTGTCAGACTGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGccc > 1:1195849/1‑239 (MQ=255) tttGCTTGTCAGACTGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGGTC‑CTGACACCATCCCCacatg > 2:670461/1‑233 (MQ=255) tttGCTTGTAAGACTGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGccc < 1:1293205/239‑1 (MQ=255) aGACTGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGCCC‑ATGACACCCACCCCATCACCCCCACTTTct > 2:2129172/1‑237 (MQ=255) aCTGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGCTA‑CTGACGCCATCACCAACGCCCCGACTTTCGCCa > 1:498591/1‑239 (MQ=255) cTGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGc < 1:414042/236‑1 (MQ=255) tGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGAATTTCGCCAGc > 1:1378584/1‑239 (MQ=255) tGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGCCAGCGGACGCCA‑CACCCTCGCCCAAACttttcgccg > 1:1050942/1‑232 (MQ=255) tGCCAATAATCCAGATAGACGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAATCGGTTAGAAATGATAGGGTAATGGCAGGTGCAATGCTGGCGGGGCCA‑CTGCGACCATCACCCTTTCCCAAACttttcccca > 2:1881859/1‑232 (MQ=255) atCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑At > 1:295488/1‑238 (MQ=255) ccgccAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCCAACCTTCGCCACCCT‑CAA‑ATTCCCGCC‑ggtg > 1:572570/1‑239 (MQ=255) ccgccAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGCTA‑CTGACGCCATCACCATCGCCCACACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑gggg > 1:1877352/1‑237 (MQ=255) aaCCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGAAATGGCAGTTGCAATGCTGGCGGTGCCA‑CAGAAGGCATCACCATAGCCCAGACTTTCGCCAGCAC‑AAA‑AATGCCGCC‑CGGGGGAATGAActcc > 1:91379/1‑237 (MQ=255) ataataTAACGCGGTTCTGCCTGAAGGCCGCAAAACAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCATCCACGCCCAGACTTTCGCCAGCAC‑AAA‑ATTACCGCC‑GGTGGGAATGACCTCT‑TCGCCgag > 1:1772224/1‑239 (MQ=255) tataACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCCCCCTCGCCCACACTTTCGCCCGCAC‑AAA‑ATACCCCCC‑CGTGGGAATGAACCCT‑TTGCCCCGATCa > 2:495448/1‑239 (MQ=255) cgcgGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTACCAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTT‑ATGACGCCATCACCAACGCCCCGACTTTTGCCACCAC‑AAA‑CTTTCCGCC‑GGAGGGAATAACCCTC‑TCGCCGAGATCAATaaa > 1:1924469/1‑239 (MQ=255) cgcgGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCCGACTTTCGCCAGCAC‑AAA‑ATTCCCCCC‑GGTGGTAATGACCTCT‑TCGCCGGGATCAATaaa > 1:1723638/1‑239 (MQ=255) cgcgGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCCA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCCATaaa > 1:342625/1‑239 (MQ=255) ggTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCCGACTTTCGCCAGCAC‑AAA‑ATTCCCCCC‑GGGGGTAATGACCCCT‑TCGCCGAGATCAATAAAATa > 1:301312/1‑239 (MQ=255) ttCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCCTCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑AATCCCGCC‑GGGGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGa > 1:684861/1‑239 (MQ=255) ttCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGGGGGAATGACCTCT‑TCCCCGAGATCAATAAAATAGa > 1:474271/1‑239 (MQ=255) ttCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCCCC‑GGGGGGAAAGACCTCT‑TCGCCCAGATCAAAAAAATa > 1:69872/1‑237 (MQ=255) ccTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CCGACGCCATCACCCTCCCCCAGACTTTCGCCCACAC‑AAA‑ATTCCCGCC‑CGGGGGAATGACCTCT‑TCCCCGAGATCAATAAAATAGATaaa > 1:1774505/1‑237 (MQ=255) cTGAGGGCCGAAAAGCAGCGGCGATAATGCTGACAGGGCGATCTCAAGCAGAATGTTGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAac‑ac < 1:447491/239‑1 (MQ=255) gccagcagCAAAGCGGCAGCGAAATGGCGGACTGGGGGATCTCAAGAAGAAGGTTGTTTCCCCGCGGTACAGGGCCTAAAGGGG‑CCGGCCTGCCGGGCGTTTGGAAATGATCGGGTAATGGCAGTTCAAATGCGGGCGGTGCTC‑CTGCCCCCATCCCCATCCCCCATCCTTCCCCCACAAA‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAac‑ac < 2:948342/230‑1 (MQ=255) aGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑AATCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCCATAAAATAGATAAA‑ACCTTg > 1:148405/1‑239 (MQ=255) ccGCAAAGCAGCAGCGATAATGCTGACAGTGCGATTTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGCTA‑CTGACGCCCTCACCATCGCCCAGACTTTTGCCAGCAC‑AAA‑AATCCCGCC‑GGGGGGAAAGACCCCT‑TCGCCGGGAACAATAAAAAAGAAAAC‑ACCTTT‑Att > 2:447491/1‑239 (MQ=255) gCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCa > 1:1603446/1‑152 (MQ=255) gCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCa < 2:1603446/152‑1 (MQ=255) agcagcGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGGGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAA‑ACCTTG‑ATTATCCAgcg > 1:1805718/1‑238 (MQ=255) cagcGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGGGGGAATGACCTCT‑TCGCCCAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATccctttc > 1:948342/1‑232 (MQ=255) agcGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAA‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAgcgc < 1:363391/236‑1 (MQ=255) aTGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGGTA‑CGTAACCCATCACCAATGCCCAGACTTTTGCCCGCAA‑AAA‑AATCCCGCCGGGGGGAAAAGACC‑CT‑TTCCCGGGAACAAAAAAAAAAAAAAC‑ACCCTT‑ATTTCCCAGCGGAcacccacg > 2:31727/1‑234 (MQ=255) gCTGACAGGGCGACCTCAAGCAGAATGAGTTTTTCGCGCCTTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCCCCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGc < 1:490555/187‑1 (MQ=255) tGACAGTGCGATCTCAAGCAGAATGATTTTTTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGAAAAGGATCGGGTAAGGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGcag < 1:369562/238‑1 (MQ=255) aCAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGGTA‑CTGACCACCTCCCCAACGCCCCAACTTTCGCCCGCAC‑AAA‑AAATCCCCC‑GGCGGGAACAGACTCC‑TCCCCCAGAGCGAAAAAAATGAAAAC‑ACCCTT‑ATTATCCAACGCACCCCCCCGGcagtca > 2:1255465/1‑239 (MQ=255) aCAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCCTCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATc > 1:581691/1‑217 (MQ=255) aCAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACCACCTCACCCTCCCCCCGACTTTCGCCAGCAC‑AAA‑AATCCCGCC‑GGTGGTAAAGACCTCT‑TCGCCGCGATCAATAAAATAGAAAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGcagtc > 2:1298626/1‑238 (MQ=255) tGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCCGACTTTCGCCAGCCC‑AAA‑ATTCCCCCC‑GGGGGTAATTACCCCT‑TCGCCCAGGTCCATAAAAAAAATAAA‑CCCTTG‑ATTTTCCAACCCACACCCCGCGCAgtcagtca > 2:1034939/1‑239 (MQ=255) tGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGCTA‑CTGACCCCCCCCCCATCTCCCAGACTTTTGCCCGCCCAAAA‑ATTCCCCCC‑GG‑GGGAAAGACCCCT‑TTCCCCAGATAAATAAAATATATAAA‑CCACTG‑ATTTTCCACCGCACACCCCAGGcaaccacata > 2:9010/1‑231 (MQ=255) aGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGGAAAGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCggg > 1:126673/1‑239 (MQ=255) tgatgTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGCGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCCGACTTTCGCCAGCAC‑AAA‑ATTCCCCCC‑GGGGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGGCAGGCAAATGAGCGGGGTaaaaa > 1:12060/1‑237 (MQ=255) tgTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGGTA‑CTGACGCCATCACCa > 2:174196/1‑105 (MQ=255) tgTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCa < 1:174196/105‑1 (MQ=255) aTTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGGGGTA‑ATTAAGCCCACACCCACGCCCAGACTTTCCCCAACCC‑AAA‑ATTTCCCCC‑CGGGGGAAAGACCCCTCTCCCCG‑GATCAATAAAAAAAATAACAACCTTG‑‑TTTTACATCGACCACCACGGGGAAGACGTAAAAAGAGCGGGGGaaaaaagccat > 2:1733740/1‑231 (MQ=255) tCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGGGGGAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAac‑a > 1:1645261/1‑177 (MQ=255) tCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑ACGACACCCTCACCCTCCCCCAGACTTTTCCCAGCAC‑AAA‑AATCCCGCC‑GGGGGTCATGACCCCC‑TTCCCGGGAGCAATAAAAAAAATAAC‑ACCCTG‑ATTATCCAGCCCAACCCACGGGCAGGCAGACAAAAGAGCCGGGTAAACaaacaat > 2:711590/1‑231 (MQ=255) gcCGTAACAGGCTAAAAGGAA‑GGGGCCTGCCAGTCGGTTGAAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCCCCATCGCCCAGACTTTCGCCAGCAA‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGAt < 1:894847/169‑1 (MQ=255) gcCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCCACACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGGGGGAATGACCTCT‑TCGCCGCGCTCAATAAAATAGATAAA‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGGCAGTCAAAAGAGCGGGGGAAAAAAGCATTGCCGaa > 2:677933/1‑239 (MQ=255) gcCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCGT‑CTTACGCCCCCCCCAACCCCCAGAACTTTGCCCGCAC‑AAA‑ATTTCCGCC‑CGGGGGAATTACCCTT‑TCGCCCGGGTCCAAAAAAAAAATAAA‑ACCCTGAATTATCCAG‑GCCCACCACGGGGCCCCAGACCAAAGAGAGGGGGAAAAATGCAtaccgtaa > 2:1515225/1‑232 (MQ=255) gcCGAAACAGGCCTAAAGGAA‑GCGCCCTGCCAGTCGTTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGCCGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAac‑ac < 1:392216/174‑1 (MQ=255) ccGTAACGGACAAAAGGGAA‑GCGCCGTGCCGGTCGGTTGAAAATGATCGGGTAATGGCAGTTGAAATGCTGGCGGTCCTA‑CTGCCCCCATCCCCATCCCCCAGACTTCCGCCAACAA‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGaaa < 2:879823/239‑1 (MQ=255) gTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGGAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGGCAAATGAGCGGGGTAAACATGCATTGCTGAAACg > 1:205638/1‑239 (MQ=255) gccgaaGGAACGCCGCCCGCCAGTCGGTTGAAAATGTTCGGGTAATGGCAGTGTCAATGCGGCCGGTGCTA‑CTCACCCCATCACCATCGCCAAGACTTGCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACAt < 1:362585/234‑1 (MQ=255) aaaGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGGGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGGAAACATGCATTGCTGAAACGATACATTTCtt > 1:232988/1‑239 (MQ=255) aggggCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAA‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTg < 1:495448/236‑1 (MQ=255) gcgggcggCCAGGCGGTTGAAAAGGATCGAGTAGTGGCATTCGCAGTGCTGGCGGTGCAA‑ACCACGCCATCACCACCCCCCAGACTTTCGACA‑CACAAAA‑ATACCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTg < 2:296855/238‑1 (MQ=255) gCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCCCCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGc < 1:696701/189‑1 (MQ=255) ccAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTag > 1:1768063/1‑239 (MQ=255) cattCGTTTGGAAATGACGGGGTAATGGCAGTTGCAATGCGGGCGGTGCTC‑CTGACCCCATCCCCATCGCCCAGACTTCCGCCAGCAA‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTaga < 1:31727/236‑1 (MQ=255) cAGTCGGTTGAAAATGATCGGGTAATGGCAGTTGCAATCCTGGCGGTGCTA‑CTGCCGCCATCCCCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTaga < 1:677933/239‑1 (MQ=255) tGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATaaaa > 1:1477401/1‑126 (MQ=255) ggAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGGCA‑ATGAAGCCATCACCATCGCCCAGACTTTTGCCAGCAC‑AAA‑AATCCCGCC‑GGGGGGAATGAACCCT‑TCGCCGAGGTCAATAAAAAAGATAAC‑ACCTTG‑ATTATCCAACGCCCACCACCGGAAGTCAATCAAAAGAGCGGGGGAAAAAATCATTGCTGAAACGATAACTTTCTTTAACTGATGGCGGAGAGAATCCAgg > 2:633083/1‑238 (MQ=255) aTGATCGGGTAATGGCAGTTGCAATGCTGGGGGTGCTA‑CTGACGCCATCCCCATCGCCCAGACTTTCGCCAGCAA‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCg < 1:1852050/239‑1 (MQ=255) aTGATCGGGTAATGGCAGTTGCAATGCGGGCGGTGCTA‑CTGACGCCATCACCATCGCCAAGACTTTCGCCAGCAA‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCg < 1:603478/239‑1 (MQ=255) tGATGGGGTAATGGCGTTTGAAATGCTGGCAGTGCTC‑CGGACCCCATCCCCATCCCCCAGTCTTTCGCCACCAA‑AAA‑TTCCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCGc < 1:1255465/239‑1 (MQ=255) ggTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCAGCGCCCAGCCTTTCGCCAGCAA‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCGCTAccc < 1:1502665/238‑1 (MQ=255) cTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTc > 1:184949/1‑205 (MQ=255) gCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCGCTACCCACGCTTTAGCCGTCGGACGCCCg > 1:1881980/1‑239 (MQ=255) ctccTGACGCCATCCCCCTCGCCC‑GGCTTTCGCCCACAA‑AAATATCGCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGGGAGTCCAGTGCCGCTACCCACGCTTTAGCCGTCGGACGCCCGGTTgc < 2:12060/235‑1 (MQ=255) tccggACCCCACCCCCACCGCCCAGCCTTTCCCCAGCAA‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCGCTACCCACGCTTTAGCCGTCGGACGCCCGGTTgcca < 1:9010/235‑1 (MQ=255) aCGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTaga > 2:338523/1‑185 (MQ=255) aCGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTaga < 1:338523/185‑1 (MQ=255) gCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGAAATGACCTCT‑GCGCCGAGCTCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCGCTACCCACGCTTTAGCCGTCGGACGCCCGGTTGCCACGCCACt > 2:677716/1‑239 (MQ=255) aTCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATAAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCGCTACCCACGCTTTAGCCGTCGGACGCCCGGTTGCCACGCCACttt > 2:1090136/1‑238 (MQ=255) caccacCGCCCAGACTTTCGCCACCAC‑AAA‑ATCCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCGCTACCCACGCTTTAGCCGTCGGACGCCCGGTTGCCACGCCACTTTCCg < 1:1034939/239‑1 (MQ=255) | TACGCTTTGCTTGTCAGACTGCCAATAATCCAGATAGCCGCCAGCACAGGAACCAAAATAATATAACGCGGTTCTGCCTGAAGGCCGCAAAGCAGCAGCGATAATGCTGACAGTGCGATCTCAAGCAGAATGATGTATTCGCGCCGTAACAGGCCTAAAGGAA‑GCGGCCTGCCAGTCGGTTGGAAATGATCGGGTAATGGCAGTTGCAATGCTGGCGGTGCTA‑CTGACGCCATCACCATCGCCCAGACTTTCGCCAGCAC‑AAA‑ATTCCCGCC‑GGTGGTAATGACCTCT‑TCGCCGAGATCAATAAAATAGATAAC‑ACCTTG‑ATTATCCAGCGCACACCACGGGCAGTCAGTCAAATGAGCGGGGTAAACATGCATTGCTGAAACGATACATTTCTTTAACTGTTGGCGTAGAGAGTCCAGTGCCGCTACCCACGCTTTAGCCGTCGGACGCCCGGTTGCCACGCCACTTTCCG > NC_007779/2151810‑2152281 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |