| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 2,173,679 | A→C | 12.6% | pseudogene (192/306 nt) | Y75_RS10955 ← | DeoR/GlpR transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 2,173,679 | 0 | A | C | 12.6% | 338.5 / 4.3 | 116 | pseudogene (192/306 nt) | Y75_RS10955 | DeoR/GlpR transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (78/19); new base C (2/15); total (81/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.13e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 118 total aligned reads displayed.
TAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGG > NC_007779/2173442‑2173917 | tAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTAc < 2:182921/239‑1 (MQ=255) aaTTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTTAAAACAAGAACCTCGCTTAGGCCTGTGGCCATATTACGTGGGTAGGAACAGTCATCCCTTCGTGGA‑TCATTTTTACTGCCGCCTGCCGTATTCTGTTTTTTTGCGCGCTGTAGAGCTGAAAACGC‑CCTTTTAACCCGACTTCATGGGGCT‑CGGTTT‑CTCTCTTAc > 2:750630/1‑238 (MQ=18) aaTTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTAcc < 1:37655/239‑1 (MQ=255) tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGTCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCTAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACa < 1:1040205/239‑1 (MQ=255) tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTTCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAAGCCGACTTCCTGGGTCT‑CGGTTT‑CCCTATTACCAGACa > 1:239797/1‑239 (MQ=255) tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACa > 1:2057284/1‑239 (MQ=255) tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACa > 1:1377798/1‑239 (MQ=255) tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACa > 1:1306555/1‑239 (MQ=255) tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCCTAGGCCTGTGTCCATATTACGTGGGGAGGAACAGTCATCCCTTCGTGGA‑TCATTTTTACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTCAACCCGACTTCCTGGGTCT‑CGGTTT‑CCCCATTACCAGACa > 2:2074433/1‑239 (MQ=255) tCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCCGTCCGGGACAATTTGCAAACAACAACCTCGCTTAGGACTGTGTCACTATTACGTGGGTAGCATCAGTCAACCCTTCGTGGA‑TCATTTTGACTGCCCCCTACGCCATTCTGTTTTTTGTCGCGCTGGCGAGCTGAAATCGC‑GCTTTAAACCCCACCTCCTTGAGCT‑CGGTTT‑CACAATTAcacgatatt > 2:890764/1‑231 (MQ=21) tCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAAGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCCC‑TCTTTAAACCCGACTTCCTGGGGCT‑CGGTTT‑CCCTATTACCAGACatt > 1:1221628/1‑239 (MQ=255) aaTGTGATTACAATCGGTGGCGGCGGCACCGTTGGTGTGGCGGACTCAGTCCCGAAAAAATTGAAAACAAAAAAATCGCTTAGGCCTGTGTCTAAATTTAGTGGGCAGGAACAACCATCCCTTCGTGGG‑TCATTTTTACAGACCGCTGCAGTGTTGTGTTTTTTGGAGCGCTGGCGAGCTGAAATCGC‑CCTTTAAAACCGACTTTCTGGGTCT‑CGGTTT‑CACTATTCCAAGTCattatt > 2:557294/1‑239 (MQ=16) aaTGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACattatt > 1:1097727/1‑239 (MQ=255) aaTGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACattatt > 1:852986/1‑239 (MQ=255) tgtgATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTAttt > 1:1279350/1‑238 (MQ=255) tgtgATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGAACAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTAttt > 1:463567/1‑238 (MQ=255) aTTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGATGTGGAATCGC‑TCTTTAAACCCGCCTTCCTGGGGCC‑CGGTTT‑CACTATTTCCCGACATTCTTTTcg‑c > 2:1797138/1‑238 (MQ=25) aTTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTcg‑cc > 1:2142721/1‑239 (MQ=255) cAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGACCCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCAc < 1:2167442/239‑1 (MQ=255) gTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCAt > 1:774964/1‑239 (MQ=255) gTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCAt > 1:1572369/1‑239 (MQ=255) ggcggcggcACAGTTGGTGGGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGACCCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGTTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTCCCAGACATTATTTTCG‑CCGCACCGCCATGa < 1:1797138/239‑1 (MQ=255) gggggggcACGGTTGTGGTGGGGGCCTCATTCCGGAAAAATTTAAAAACAAGACCCTCCCTTTGGCCTGTGTCCATATTACGTGGGTAGTATCAGTCTCCCCTTCGTGGA‑TCATTTTGACTCCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGATCTAAAACCGC‑TCTTTAACCCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGa < 2:774964/233‑1 (MQ=255) gcgggggcACCGTGGGTGGGGGGCCCTCAGCCCGGAAAAATTGGAAACCAAGAACCTCGCTTAGGCCTGTGTCAATATTTCGGGGGTAGGGTCGGTCTTCCCTTCGTGGG‑TCATTTTGACTGCCGCCTGCGCGTTTCTGTTTTTGGGCGCGCTGGCGAGCGTAAATCGC‑TCTTTAACCCCGCCTTCCTGGGTCT‑GGGTTT‑CACTTTTCCCAGACATTATTTTCG‑CCGCACCGCCATGa < 2:722207/238‑1 (MQ=255) gcggcggcACTGTTGGGGTGGCGGCCTCAGTCCGGAACAATTGAAAAACAAGAACCCCGCTTAGGCCTGTGCCCATATTGCGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTGGCCTGCCCCCGGCGCTATTCTGTTTTTGGGCGCGCTGGCGAGCTAAAATCGC‑TCTTTAACCCCCACTCCCTGGGTCT‑GGGTTT‑CACTATTACCAGACATTTTTTTCG‑CCGCACCGCCATGa < 2:1377798/238‑1 (MQ=255) gcggcggcACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGATCCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGa < 1:699965/238‑1 (MQ=255) gtgtgggcTTCAGTCCGGAACAATTGGAAACCAAGAACCCCGTTTAGGCTTGTGTCCTTGTGCGGTGGGTGTGATCAGCAATCCTTCCGTGTA‑TCTTTTTACCTCCCGCCTGCGCTATTCTGTTTTTTGGCGCGCGGGCGGCCTGAAATCGC‑CCTTTAAACCCGCCTTCCTGGGTCT‑GGTTTC‑CATTATTCCCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCt < 2:1221628/234‑1 (MQ=255) gtgGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCt > 1:688844/1‑239 (MQ=255) gcggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCtttt > 1:243071/1‑239 (MQ=255) cggtccTCAGCCCGGAACAATTTGAAAACAAACACCTGGTTTGGGCTGGTTCCCATGTTGGGTGGGTAGGATCAGTATTCCCTTGGGGGT‑TATTTTTGACTGACCCGTGCTCTATTCTGTTTTTTGGCGCGCTGCCGAGCTGAAATCGC‑TTTTTAAACCCGTCTTCCTGGGTCT‑CGGTTT‑CCCTATTACCGGACATTATTTTCG‑CCGCCCCGCCATGAAAGCGCGTAACCACGCCttt < 2:1354441/234‑1 (MQ=255) ggcCTCAGTCCGGTACAATTTGAAAACAAGAACCTCGCTTAGGCCCGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGGGCGCTCGCGAACTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCC‑CCGTTT‑CCATATTACCAGCCATTCTTTTCC‑CCGCACCGCCATGAAAGCGCTTACCCACGCCTTTTTg > 2:228136/1‑239 (MQ=37) ggcCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGCTT‑CACTATTACCAGACATTATTTTCC‑CCGCCCCGCCATGCAAGTCCGTACACACCCCTTTTTg > 2:1721499/1‑239 (MQ=38) tCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCg > 1:1762786/1‑239 (MQ=255) tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATc > 1:1871/1‑239 (MQ=255) tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATc > 1:1204342/1‑239 (MQ=255) aaGAACCTCGCTTAGGCCTGTGTCCATATTTCGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGCCTGCCGCCTGCCCTATTCTTTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCGGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCa < 1:1251381/234‑1 (MQ=255) cTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCCCCGCCATGAAACGGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGACGGGATTGTCg > 2:1251381/1‑234 (MQ=255) tAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCTCCTGCGCTATTCTTTTTTTTGGCGCGCGGGCGGGCTGAAATCGC‑TCTTTAAACCCGACTCCCTGGGTCT‑CGGTTT‑CCCTATTACCAGACATTATTGTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGa < 1:890764/239‑1 (MQ=255) gtgtCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGgcagca > 1:2119701/1‑239 (MQ=255) gtgtCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGgcagca > 1:442818/1‑239 (MQ=255) tgtCCATATTACGTGGGTAGGGTCAGTCATCCCCTCGTGGG‑TCATTTTTACTGCCGCCTGCGCGATTCTGTTTTTTTGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAAACCGCCTTCCTGGGGCT‑CGGTTT‑CCCTATTACCAGACATTATTTTCG‑CCGCCCCGCCCTGAAAGCGCGTAACCCCGCCTTTTTGTTTGCGAAAGCGCCAATCGGCACGGGTTGTCGCTTCCTAGCCAGCaa > 2:1140460/1‑239 (MQ=255) tgtCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCaa > 1:596274/1‑239 (MQ=255) tgtCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCaa > 1:992691/1‑239 (MQ=255) tgtCCATATTACGGGGGAAGGCTCAGTCATCCCTACGTGGA‑TCATTTTGACTGCCCCCTGCGCCATTCTGGTTTTTGGCGCGCTGGCGAGCTGAATTCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTTTTCCCCGCCATTATATTCG‑CCGCACCGCCATGCAAGCGCGTAACCACTCCTTTTTGGTCGAGAACGACAACATCGACACGGACCGTCGCATACGACgcagcca > 2:1382981/1‑237 (MQ=255) atatTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATAc > 1:20668/1‑238 (MQ=255) tatTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACt > 1:1264528/1‑238 (MQ=255) aCGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCg > 2:1871994/1‑238 (MQ=255) aCGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCg > 2:874509/1‑238 (MQ=255) gTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAACCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCa > 1:27065/1‑239 (MQ=255) ggTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCAGCCatc > 2:1260334/1‑236 (MQ=255) gTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGAt > 1:1865333/1‑238 (MQ=255) gTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGAt > 1:488919/1‑238 (MQ=255) tAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATc > 2:1365473/1‑238 (MQ=255) aTCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGa > 1:1864952/1‑238 (MQ=255) ttCCCTTGGTGGATTTTTTTTGCCTGCCCCCGGCGTTTGTCTGTTGTGCGGCGTGTTGGAGCGCT‑AAATCCCTTCTTAAACCCCGCCTCCCTGGTTC‑‑CGGTTTCCACTTTCCCCAGACTTTTTTTCCC‑CCGCCCCGCCATGAAAGCGCGTAACCCCGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCa < 2:356779/238‑1 (MQ=255) cccTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACgg > 1:1577330/1‑239 (MQ=255) ccTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGt > 1:1933656/1‑239 (MQ=255) ccTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGt > 1:137417/1‑239 (MQ=255) tCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTc > 1:1577237/1‑238 (MQ=255) cGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATa > 1:1838381/1‑207 (MQ=255) cGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTc > 1:269732/1‑237 (MQ=255) gTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTc > 1:1583547/1‑236 (MQ=255) gTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTc > 1:861327/1‑236 (MQ=255) tcctttttGACTCCCGCCTTGGCTATTCTGTTTTTTGGCGCGTGGGCGAGCTGAATTCCC‑TCTTAAACCCCGCCTCCCGGGGTCT‑CGTTTT‑CACTATTCCCAGCCTTTTTTTTCG‑CCGCACCGCCATGAAAGCGCGTACCCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGtt < 2:1797244/234‑1 (MQ=255) cATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGttcat > 1:1488993/1‑239 (MQ=255) ccgccTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTgg > 1:1837491/1‑239 (MQ=255) gcccTGCGCTTTTCGGTTTTTGGGCGCGCGGGCGAGCTAAAATCGC‑TCTTTAAACCCGCCTTCCGGGGTCT‑CGGTTT‑CACTATTCCCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGga < 1:1260334/237‑1 (MQ=255) ctcgtgcgtgcttCTGTTTGTGGGCGCGCTGGCGCGTGGACATCGC‑TCTATAAACACCACTGCCGGGCTGC‑CTTTTG‑TGCTGTTGCCAGAAAGTATTTTCA‑CCGACCCGCCATGAATGCGCTTTACCACCCCTTTTTGTTCGAAAAAGCGCAAACCGCCACGGTTTGTCGCTTCCTAGGCAGCAAATTTTTCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGga < 2:1864952/228‑1 (MQ=255) cgccTGCTCTATTCTGTTTTTGGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAACCCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTCCCAGACTTTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGga < 1:147987/239‑1 (MQ=255) gccTGCGCTATTCGTTTTTTTGGGCCGCGGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTCCCAGACATTATTTTCG‑CCGCCCCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGgat < 1:1365551/239‑1 (MQ=255) gcgcTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGgatga > 1:704756/1‑237 (MQ=255) ttttttGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTg > 1:1299116/1‑206 (MQ=255) ttttttGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTc > 1:77219/1‑238 (MQ=255) tGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CCCTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGgca < 1:1717280/160‑1 (MQ=255) tGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGgca > 2:1717280/1‑160 (MQ=255) tGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCga > 1:1206832/1‑239 (MQ=255) tGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCga > 1:821881/1‑239 (MQ=255) tGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCga > 1:1984954/1‑239 (MQ=255) tGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCACAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCga > 1:271474/1‑239 (MQ=255) tGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACAACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGTATGATCTTATTCCTTCGCTCga > 2:1635235/1‑239 (MQ=255) cgcgcTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGgat > 1:840133/1‑216 (MQ=255) gggCTGAAACCCC‑TCTTTACACCCGACTCCGTGGGTCT‑GGGTTC‑CACTTTTCCCAGACATT‑TTTTCGCCCGCCCCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATc < 2:1762786/236‑1 (MQ=255) aTCGC‑TCTTAAAACCCGTCTCCGGGGGTCT‑CGGTTT‑CACTATTCCCAGCCTTTATTTTCC‑CCGCTCCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTAc < 1:1802238/239‑1 (MQ=255) ttcgcttttAAACCCCGCCTCCGGGGTTTGCGGTTC‑CACTATTACCAGCCTTTATTTCCC‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTAc < 1:2074433/233‑1 (MQ=255) tctTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCata > 2:1377233/1‑239 (MQ=255) ccTTCCTGGGTCA‑CGTTTT‑CATTATTCCCAGCCATTTTTTTCC‑CCGCACCGCCATGAAAGCGCGTATCCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGc < 1:745110/238‑1 (MQ=255) aCTTCCTGGGTCT‑CGGTTT‑CACTGTTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATtgtg > 1:1380462/1‑237 (MQ=255) aCTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATtgtg > 1:973863/1‑237 (MQ=255) aCTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATtgtg > 1:1741188/1‑237 (MQ=255) aCTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATtgtg > 1:1025476/1‑237 (MQ=255) aCTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATtgtg > 1:234725/1‑237 (MQ=255) aCTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATtgtg > 1:318494/1‑237 (MQ=255) aCTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTgg > 2:260306/1‑238 (MQ=255) cTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGc < 1:1365473/238‑1 (MQ=255) tCCTGGGTTTGCGGTTT‑CCATATTCCAACAATTTTTTTTCC‑CCCTCCCGCCATGAAAGCGCGTACCCACGCCTTTTTGTTCGAGAACGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTa < 2:269732/239‑1 (MQ=255) ggTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAg > 1:579205/1‑239 (MQ=255) aCTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAAc > 1:2120688/1‑229 (MQ=255) tgtaaCCATACATTTTTTTCT‑CACCACAGCCATGAAAGGGCGTACCCACGCCTTTTTGTACGGGAAAGCAGAAACCTGCGAGGATTATCACTGCCGGGGCAAAAAACACCCCCGCAAGATCCTGGACAAGCACGGTTCCCTGTTCATTCACTAATTGCATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATAGTTGCCAGTGTAAACGAAGGAGGACCa < 2:271474/235‑1 (MQ=255) ttACCAGATTTTATTCTCG‑CCGCCCCGCAATGAAAGCGCTTAACCCCGCTTTTTTGTTCGAAAAAGCGCAATTCGGCCCGGATTTTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCAtt < 2:579205/239‑1 (MQ=255) ttACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTAtt > 1:1773541/1‑167 (MQ=255) | TAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCATCCCTTCGTGGA‑TCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTTGGCGCGCTGGCGAGCTGAAATCGC‑TCTTTAAACCCGACTTCCTGGGTCT‑CGGTTT‑CACTATTACCAGACATTATTTTCG‑CCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACAAGCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGG > NC_007779/2173442‑2173917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |