Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 2,469,925 T→C 11.3% T177A (ACC→GCC)  mlaA ← phospholipid‑binding lipoprotein MlaA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077792,469,9250TC11.3% 302.5 / 3.2 110T177A (ACC→GCC) mlaAphospholipid‑binding lipoprotein MlaA
Reads supporting (aligned to +/- strand):  ref base T (73/22);  new base C (2/12);  total (75/35)
Fisher's exact test for biased strand distribution p-value = 9.93e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 111 total aligned reads displayed.

TTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAGTGGACC  >  NC_007779/2469691‑2470163
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                              
ttGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGc                                                                                                                                                                                                                                            <  2:1739523/239‑1 (MQ=255)
ttGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGc                                                                                                                                                                                                                                            <  1:426984/239‑1 (MQ=255)
 tGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGcc                                                                                                                                                                                                                                           <  1:2137112/239‑1 (MQ=255)
         aTTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGa                                                                                                                                                                                                                                   >  1:840558/1‑239 (MQ=255)
           tCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAAc                                                                                                                                                                                                                                 <  1:2164435/239‑1 (MQ=255)
           gcggAATCAATCTCTTTTAAATCGTCCTGAATCGCTTGGGCGTGCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAAc                                                                                                                                                                                                                                 <  2:1711450/236‑1 (MQ=255)
               aaTCAATATCTTTTACATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATACTATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCCTTTACCCACAGACCTCGGCCAGGTCAGCCAGGAACGAACCggg                                                                                                                                                                                                                             >  1:666865/1‑239 (MQ=255)
               aaTCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCggg                                                                                                                                                                                                                             >  1:1893894/1‑239 (MQ=255)
                          tttAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATc                                                                                                                                                                                                                  <  1:863182/239‑1 (MQ=255)
                           ttAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATc                                                                                                                                                                                                                  >  2:1248894/1‑238 (MQ=255)
                             aaaTCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGc                                                                                                                                                                                                               <  1:314383/239‑1 (MQ=255)
                                    ccTGAACCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCCCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGCCAGCCAGGTAAGAACCGGGTAAAAACCATCCGCCAtctc                                                                                                                                                                                                         >  2:566627/1‑238 (MQ=255)
                                        aaTCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGc                                                                                                                                                                                                                                            >  1:64736/1‑199 (MQ=255)
                                        aaTCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGc                                                                                                                                                                                                                                            <  2:64736/199‑1 (MQ=255)
                                         accGCTTGTGGGTTTGGGCTTTCCCTGGGGTTTGGGTCCCCCGCCATTAGGGAGAAAATCAGGACGCTGGAAGGCCGTTTCGCGCACCATAATAAAGGGACCGGACGCCGGACGCAGCAACCCATCGGAACCCCGCAGCTGAGCGGGGGTTTCGCCCCCTTCAAGCGCCCATTTACCCACACACACCGCCCAGGCCAGCCAGGAAAGACCCGGGTAAAAACCATCCGCCATATcaccac                                                                                                                                                                                                    <  2:6023/237‑1 (MQ=255)
                                             cTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCGGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCACACGCCATATCACCACCGtca                                                                                                                                                                                               >  2:1607525/1‑239 (MQ=255)
                                             cTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGCAAGAACCGGGTAAAAACCATCCGCCATACCCACACCGcca                                                                                                                                                                                               >  2:1450942/1‑239 (MQ=255)
                                             cTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAAc                                                                                                                                                                                                                                 <  2:129907/205‑1 (MQ=255)
                                             cTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAAc                                                                                                                                                                                                                                 >  1:129907/1‑205 (MQ=255)
                                             cTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGtca                                                                                                                                                                                               >  1:920199/1‑239 (MQ=255)
                                             cTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGtca                                                                                                                                                                                               >  1:431914/1‑239 (MQ=255)
                                             cTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGtca                                                                                                                                                                                               >  1:6023/1‑239 (MQ=255)
                                                     tttgtggttttCCGTGGGGTTTGGTTTCCCCGCCATTACGGATGAAATCAGGCGCCTGAAGGTACGCGCCGCGCCCCATAATATAAGGAGCGGGCGACTGACGCAGCGGACCATCGGAACCAAGCAGCTGGGCGCGGGTTTCGACCCCTTCAAGCGTCCTTTTCCCCACAGACACCGGCCAGGCCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACg                                                                                                                                                                                          <  2:2119185/231‑1 (MQ=255)
                                                             tttCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAACCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCGGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAACCCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg                                                                                                                                                                                <  1:1607525/239‑1 (MQ=255)
                                                             tttCCTGCGGTTGGATTCCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGGGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAg                                                                                                                                                                                <  1:1450942/239‑1 (MQ=255)
                                                                      ggTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAATGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTa                                                                                                                                                                        >  2:1761920/1‑239 (MQ=255)
                                                                        ttggtttccgccccCATTCGCGATGAAATCATGACGCTGGAATTACGCTTCGCGCACCATAATATAGGTGTCGGAGGCCTGCCGCACAGGACCATCGGACTCCAGCGGCTGAGGGGGGGTTTCGATCCCTCCAAGCGTCCATTAACCCACAGACACCGCCCAGGCCAGCCAGGAAAAAACCGGGAAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAg                                                                                                                                                                       <  2:752649/230‑1 (MQ=255)
                                                                          tGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAAc                                                                                                                                                                                                                                 >  2:1744098/1‑178 (MQ=255)
                                                                          tGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAAc                                                                                                                                                                                                                                 <  1:1744098/178‑1 (MQ=255)
                                                                          tGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAAc                                                                                                                                                                    >  1:102/1‑239 (MQ=255)
                                                                          tGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCAAGGAAAGAACCGGGTAAAAACCATCCCCCATATCACCACGGACATCACGCAGCGTGAAGCTACCCTAGAAc                                                                                                                                                                    >  2:1846318/1‑239 (MQ=255)
                                                                             gTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACgg                                                                                                                                                                  <  1:1248894/238‑1 (MQ=255)
                                                                                 gccgccATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATAAAAGGATCGGACGACTCACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACt                                                                                                                                                             <  1:566627/239‑1 (MQ=255)
                                                                                 cccgccATAAGCGATGAAACATTGACGCGGGAAGTCGCCTCGCCGCACAATAATAAAAGGACGGGACACCTGACCCAGAAGACCATCGGACTCCAGCAGCTGGGCGGGGTTTTCGACCCCTCCAAGCGTCCATTTACCACCAGACATCGGCCAGGCCAGCCAGGAAAGAACCGGGAAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACt                                                                                                                                                             <  2:1570570/238‑1 (MQ=255)
                                                                                  ccgccATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATTCGCCATATCACCACCGTCATCACg                                                                                                                                                                                          >  1:1560439/1‑209 (MQ=255)
                                                                                           gCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAg                                                                                                                                                    >  1:1570570/1‑238 (MQ=255)
                                                                                           agcaTGAAAACAATGCCGCGGAAAGTACCCTCCGGCCACAATAATATAAGGTCCGGCGGCCTGACGCAGCAGACCCTCGGACTCCAGCGGCTGAGCGCGGGTTTCGCCCCCTTAAAGGCCCATTTTCCCCCCAACCACCGGCCAGGCCAGCCAGGAAAGACCCGGGAAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAg                                                                                                                                                    <  2:627544/236‑1 (MQ=255)
                                                                                                   aTCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATaa                                                                                                                                            >  1:267095/1‑238 (MQ=255)
                                                                                                            gCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCAAATCACCACCGTCATCACGCAGCGTGAAGCTACCGCAGAACGGTAAACGAAAGCAAGGCCCATAACCCAccccc                                                                                                                                   >  2:2107666/1‑238 (MQ=255)
                                                                                                              tGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATa                                                                                                                                 >  1:1973634/1‑239 (MQ=255)
                                                                                                                gAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCATGCCATAAt                                                                                                                               >  1:1919388/1‑239 (MQ=255)
                                                                                                                    accGCTTCGACCCCCAAAAAATAAGGGCCGGACGACTGAGCCAGCCCACCACCGGAATCCAGCGGCTGGGCGCGGTTTTAGACCCCTTCAAGCGCCCTTTCCCCCACAGCCACCGCCCAGGCCAGCCAGGAAAGAACCGGGAAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGAcc                                                                                                                           <  2:840558/237‑1 (MQ=255)
                                                                                                                      cGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCAATAACCCACGACATAATGACCaa                                                                                                                         >  2:470314/1‑239 (MQ=255)
                                                                                                                        cTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTg                                                                                                                                                            >  2:2148305/1‑202 (MQ=255)
                                                                                                                          tCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGt                                                                                                                     >  1:393187/1‑239 (MQ=255)
                                                                                                                             gcccACCATAATGTAAGGCTCGGACGCCTGCCCCGACACCCCATCGGAACCCGGCAGCTGCGCGCGGGTTCCGATCCCTCCAAGCGTCCATTTCCCCACAGCCCCCGCCCAGCCCAGCCAGGAAAGACCCGGGAAAAACCCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTGAGGCCCATAACCCACGCCATAATGACCAAGCGtac                                                                                                                   <  2:393187/236‑1 (MQ=255)
                                                                                                                                 aCCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGa                                                                                                                             >  1:1731866/1‑225 (MQ=255)
                                                                                                                                   cATAATATAGGGATCGGACGTCCAGCGCAGCACACCATCGGAATCCAGCAGCTGGGCGCGGGTTTCGCTCCCTCAAAGCCTCCATTACCCCACACACCCCGCCCGGCTCCGCCAGGAAAGACCCGGAAAAAACCCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGa                                                                                                             <  2:180135/239‑1 (MQ=255)
                                                                                                                                             ggATCGGACGACTGACGCAGCAGACCATCGGAATCTAGCAGCTGAGCGCGGGTTTCGCTCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATAACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTCAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAACGGTGAgg                                                                                                   >  2:462718/1‑239 (MQ=255)
                                                                                                                                             ggATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTACCTGAACGTAAGGCCCATAACCCACGCCAAAATGACCAAGCGTACTACCGAAGCGGTGCgg                                                                                                   >  2:2086537/1‑239 (MQ=255)
                                                                                                                                             ggATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACt                                                                                                                                                             >  1:13955/1‑181 (MQ=255)
                                                                                                                                             ggATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAgg                                                                                                   >  1:182815/1‑239 (MQ=255)
                                                                                                                                             ggATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGGGAgg                                                                                                   >  2:554719/1‑239 (MQ=255)
                                                                                                                                             ggATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCACTAATGACCAAGCGGACTACCGAAGCGGTGAgg                                                                                                   >  2:1024732/1‑239 (MQ=255)
                                                                                                                                             ggATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTAGATCCCTTCAAACGTCCATTTACCCACAGACATCGGCCAGGTTAGCCAGCAAAGAACCGGGTAAAACCCATCCGCCATAGCACCACCGTCATCACGCAGCGTGAAGCTACCGAACAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACCACCGAACCGGTCAgg                                                                                                   >  2:1319595/1‑239 (MQ=255)
                                                                                                                                             ggATCGGACGACTGACGCAGCAGACCATCGGAATCAAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGCAAGAACCGGGTAAAAACCCTCCGCCATAAAACCACCGTCATGACGCAGCGTGAAGCTACCGTAGAACGGTAACCGAACGTAAGGCCCCTAACCCACCCCCAAAAGACCAAGAGGACTACCGAAGAggcacgg                                                                                                   >  2:1387044/1‑234 (MQ=255)
                                                                                                                                               aTCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGt                                                                                                  >  1:963950/1‑238 (MQ=255)
                                                                                                                                               aTCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGGACTACCGAAGCGGGCAGGt                                                                                                  >  2:1419402/1‑238 (MQ=255)
                                                                                                                                                 cGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCa                                                                                               >  1:156148/1‑239 (MQ=255)
                                                                                                                                                 cGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCa                                                                                               >  1:711538/1‑239 (MQ=255)
                                                                                                                                                 cGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCACAATGACCAAGCGAACTACCGAAGCGGTGAGGttac                                                                                               >  2:1809387/1‑237 (MQ=255)
                                                                                                                                                  ggACGACTGCCGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCAGTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAGACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAAACGAACGCAAGGCCCAGAACCCACGCCATAATGACCAAGCGTACAACCGAACCGGCCAGGTTCAg                                                                                              >  2:330931/1‑239 (MQ=255)
                                                                                                                                                  ggACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATa                                                                                                                                 <  1:1011650/204‑1 (MQ=255)
                                                                                                                                                  ggACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGCCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATa                                                                                                                                 >  2:1011650/1‑204 (MQ=255)
                                                                                                                                                   gacgacTGACGCAGCAGACCATCGGAATCCAGCAGTTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCAACCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGAAACTGAACGTAAGGCCCAAAACCCACGCCATAATGACCAAGCGTACTACCGAAGAGGGGAGGTTCAg                                                                                              >  2:456163/1‑238 (MQ=255)
                                                                                                                                                   gacgacTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGAACCCTTCAAGCGTACATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGGGAAGCTACCGTAGAACGGTAACTGAACGGAAGGCCCATAACCCACGCCATAATGACCAAGCGGACTACCGAAGCGGTGAGGttgac                                                                                              >  2:752883/1‑235 (MQ=255)
                                                                                                                                                    acgacTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATaa                                                                                                                                            >  1:932345/1‑191 (MQ=255)
                                                                                                                                                        cTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCaa                                                                                                                         <  1:2044299/206‑1 (MQ=255)
                                                                                                                                                        cTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCaa                                                                                                                         >  2:2044299/1‑206 (MQ=255)
                                                                                                                                                        cTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAACGGCGAGGTTCAGTCCGtt                                                                                        >  2:215386/1‑239 (MQ=255)
                                                                                                                                                         tgccGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGTTTTCGATCCCTTCAAGCGTCCATTTACCCAAAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGAAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTg                                                                                       <  1:1727046/236‑1 (MQ=255)
                                                                                                                                                            cGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGaa                                                                                                            >  1:742919/1‑215 (MQ=255)
                                                                                                                                                                 cagACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCg                                                                               >  2:643261/1‑239 (MQ=255)
                                                                                                                                                                  agACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGAACTACCGAAGCGGTGAGGTTCAGTCCCTGGCAGATTCgg                                                                              >  2:1727046/1‑239 (MQ=255)
                                                                                                                                                                         tggcaTCCCGCAGCGGGGGGGGGGTTTCACCCCTTTAAAGCGCCCTTTCACCCACACACACCGCCAAGGCCGCCCAGAAAAGAACCGGAAAAAACCCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGcc                                                                       <  2:431914/235‑1 (MQ=255)
                                                                                                                                                                         cGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGATTCGGGTTcccc                                                                       >  2:1077528/1‑239 (MQ=255)
                                                                                                                                                                                cagcagCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCt                                                                 >  1:348453/1‑238 (MQ=255)
                                                                                                                                                                                cagcagCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCt                                                                 >  1:1206859/1‑238 (MQ=255)
                                                                                                                                                                                      cTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACa                                                           >  1:449947/1‑238 (MQ=255)
                                                                                                                                                                                       tGAGGGCGGGTTTCGACCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGTCCAGCCAGGAAAGAACCGGGTAAAACCCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAAc                                                            <  1:1419402/236‑1 (MQ=255)
                                                                                                                                                                                       tGAGCGCGGTTTTCCATCCCTCCAAGCGCCCATTTCCCCACACCCACCGGCCAGGCCAGCCAGAAAAGAACCGGGCAAAAACCAGCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAAc                                                            <  1:1846318/236‑1 (MQ=255)
                                                                                                                                                                                          gcgcGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAAt                                                      >  2:545064/1‑239 (MQ=255)
                                                                                                                                                                                           cgcgGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATa                                                     >  1:955625/1‑239 (MQ=255)
                                                                                                                                                                                                      cgccacacacgCGTCAATACACCCACAGACCGCGGCAGGGACCGCAAAGAAAGACACGTAAAAAACCCTCCCGCCAAAACCCCACCGTCATCCCGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATACCCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCAt                                          <  2:1400345/229‑1 (MQ=255)
                                                                                                                                                                                                          cTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATcccc                                      >  1:1764360/1‑239 (MQ=255)
                                                                                                                                                                                                                   tCCATTTACCCCCAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACg                                                                                                                                      <  2:527253/134‑1 (MQ=255)
                                                                                                                                                                                                                   tCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACg                                                                                                                                      >  1:527253/1‑134 (MQ=255)
                                                                                                                                                                                                                   tCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATgggt                             >  1:1400345/1‑237 (MQ=255)
                                                                                                                                                                                                                   tCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGgtg                             >  1:1612382/1‑239 (MQ=255)
                                                                                                                                                                                                                   tCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGgtg                             >  2:1960397/1‑239 (MQ=255)
                                                                                                                                                                                                                   tCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGgtg                             >  2:1837275/1‑239 (MQ=255)
                                                                                                                                                                                                                   tCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGgtg                             >  1:268009/1‑239 (MQ=255)
                                                                                                                                                                                                                     cATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCaaa                                   >  1:1145550/1‑231 (MQ=255)
                                                                                                                                                                                                                     cATTTACCCACAGACAGCGGCCGGCCCAGCCAGAAAAGACCCGGATAAAACCCACCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGGTGtt                           <  1:2107666/239‑1 (MQ=255)
                                                                                                                                                                                                                           aCCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGGTGTTCAGGa                      >  1:5142/1‑239 (MQ=255)
                                                                                                                                                                                                                               acaGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGGTGTTCAGGaaaaa                  >  2:146395/1‑239 (MQ=255)
                                                                                                                                                                                                                                caGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAg                                                                                                                                                                       >  1:56207/1‑89 (MQ=255)
                                                                                                                                                                                                                                 aGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGGTGTTCAGGCAAAAGc                >  2:120664/1‑239 (MQ=255)
                                                                                                                                                                                                                                      tCGGCCAGGCCAGCCAGGAAAGAACCGGAAAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAACAGCGGGTa           <  1:2092361/239‑1 (MQ=255)
                                                                                                                                                                                                                                               tCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAGTGGAcc  >  2:795188/1‑239 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                              
TTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCGGACGACTGACGCAGCAGACCATCGGAATCCAGCAGCTGAGCGCGGGTTTCGATCCCTTCAAGCGTCCATTTACCCACAGACATCGGCCAGGTCAGCCAGGAAAGAACCGGGTAAAAACCATCCGCCATATCACCACCGTCATCACGCAGCGTGAAGCTACCGTAGAACGGTAACTGAACGTAAGGCCCATAACCCACGCCATAATGACCAAGCGTACTACCGAAGCGGTGAGGTTCAGTCCGTTGCAGTTTCGGGTTCGCCATCCCTGCAACATCAATAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAGTGGACC  >  NC_007779/2469691‑2470163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: