BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,497,444	A→T	10.2%	T196T (ACT→ACA)	idnO ←	gluconate 5‑dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,497,444	0	A	T	10.2%	404.3 / 7.2	138	T196T (ACT→ACA)	idnO	gluconate 5‑dehydrogenase
Reads supporting (aligned to +/- strand): ref base A (40/81); new base T (13/2); total (55/83)
Fisher's exact test for biased strand distribution p-value = 8.88e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 138 total aligned reads displayed.

CTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTG  >  NC_007779/4497209‑4497680

   tATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCCTCCTCCACCCGTGCTTTTGGCA‑tt                                                                                                                                                                                                                                              >  1:102578/1‑239 (MQ=255)

    aTCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTTCGTTTGCACAACCACGGGGGGGAGGGCTCCGTCCCAAACCAGGGTTTTGTTCA‑tt                                                                                                                                                                                                                                              >  2:1463984/1‑239 (MQ=255)

    aTCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGGGGACGGCTCGGCCCCAACCCGTGCTTTATGCA‑ttt                                                                                                                                                                                                                                             >  2:95155/1‑239 (MQ=255)

     tctcTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTc                                                                                                                                                                                                                                            <  1:731760/239‑1 (MQ=255)

     tctcTTATTAGCGCAGCAAAAGCGGCGC‑TTCGCGCATCCCCGTAGGGGTCCGGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTCTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGAACAACCA‑GGCGGTAAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTc                                                                                                                                                                                                                                            <  2:341143/239‑1 (MQ=255)

        ctTATTAGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGt                                                                                                                                                                                                                                                   <  1:248356/230‑1 (MQ=255)

         ttattaGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGGTTTATTCG‑TTTCTGtt                                                                                                                                                                                                                                        >  1:568503/1‑239 (MQ=255)

         ttattaGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGtt                                                                                                                                                                                                                                        <  1:1819870/239‑1 (MQ=255)

         ttattaGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCCTTTGCACAACCA‑GGCGGTGAAAGCCTCGCCCTCAACCCGTGCCTTTGTCACTTTCTGt                                                                                                                                                                                                                                         >  2:597389/1‑239 (MQ=255)

         ttattaGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCA‑CAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGGCCGTTTGCACAACCA‑GGCGGGGAAAGCCTCGTCCCCAAACAGTGCTTTAGTCA‑TTTCTGttt                                                                                                                                                                                                                                       >  2:223989/1‑239 (MQ=255)

           attaGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAGTCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCCTCCTCAACCCGGTCTTTAGTCT‑TTTTTGtttt                                                                                                                                                                                                                                      >  1:1839079/1‑239 (MQ=255)

           attaGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGGGAAGGGTTTGTTCTCAACCAGTGCTTTAGt                                                                                                                                                                                                                                                   >  1:125283/1‑227 (MQ=255)

                 gCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGaaa                                                                                                                                                                                                                                  <  2:1490873/237‑1 (MQ=255)

                  ccAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGGGGAGGGCTCCTCCCCCAACAGTGGTTTTGTCA‑TTTTTGtttttgtgtct                                                                                                                                                                                                                               >  2:248356/1‑232 (MQ=255)

                    aGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCGGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGcc                                                                                                                                                                                                                             <  2:1501741/239‑1 (MQ=255)

                      aaaaGCAGCGCTTTCGCGC‑TGCACGTAGGGGGCCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCCGGCGGCGGGGGTACGTTCTCCCCAACA‑CGCGGGGAAGGCCGCGTCATCCAGCACGGCTTTATTCC‑TTTCTGCTTTTAAATAGCCCg                                                                                                                                                                                                                           >  2:1234123/1‑239 (MQ=255)

                       aaaGCGGCGCTTCCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATGGCCCgg                                                                                                                                                                                                                          <  2:1587792/239‑1 (MQ=255)

                               gcTTTCGCGC‑GGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCaa                                                                                                                                                                                                                     <  2:737716/236‑1 (MQ=255)

                                 tttCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCg                                                                                                                                                                                                                <  1:1569998/239‑1 (MQ=255)

                                 tttCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCg                                                                                                                                                                                                                <  1:1463984/239‑1 (MQ=255)

                                 tttCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCg                                                                                                                                                                                                                <  1:1283738/239‑1 (MQ=255)

                                   tcggtc‑TGAACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGtt                                                                                                                                                                                                              <  2:1406467/234‑1 (MQ=255)

                                   tCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGtt                                                                                                                                                                                                              <  1:1281924/239‑1 (MQ=255)

                                   tCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGtt                                                                                                                                                                                                              <  2:1299365/239‑1 (MQ=255)

                                   tCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAACACCGtt                                                                                                                                                                                                              <  1:251786/239‑1 (MQ=255)

                                   tCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGACACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGCCCGGTTGAACAAACA‑GGCGGGTGAGGCTTCGCTCCCCACCCGTGGTTTTGTCC‑TTTCTTGTTTGTAATTGGCCGGGCCAATaaccgt                                                                                                                                                                                                              >  2:207093/1‑234 (MQ=255)

                                          tgaaCGTAGGGGGGGTGTTAACCAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCt                                                                                                                                                                                                        <  2:568503/235‑1 (MQ=255)

                                           gCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAAGCCTCGTCCTCAAACCGTGCTTTTGTCC‑TTTTTGTTTTTAAAAAGCCCGGCGCAATACCCTTTA‑CCCGa                                                                                                                                                                                                      >  1:1302525/1‑239 (MQ=255)

                                                      ggCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCCGTGCTTTTGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCCATACCCTTTA‑CCTGAAT‑ATTTTGgc                                                                                                                                                                                           >  1:1465630/1‑238 (MQ=255)

                                                           ttAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGGTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTTTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTTTGGCGCGccc                                                                                                                                                                                     >  1:553074/1‑238 (MQ=255)

                                                           ttAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAAACAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGGGCAAAACCGTTTA‑CCTGAAT‑AATTTGGCGCGCCa                                                                                                                                                                                     >  1:446371/1‑239 (MQ=255)

                                                           ttAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGAGTGCGATTGGACAACCA‑GGCGGGGGAGGAATCTCCCTCTACCAGCGCTTTAGTCC‑ATTCATCTTTGAAATAACACGGAGCAATAAAGATTA‑CATGTCT‑ATTGTGtcgcgtg                                                                                                                                                                                      >  2:1660370/1‑236 (MQ=255)

                                                                   ccACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGGGGAGGCGTCGTCCCCAACCCGTGCTTTTTTGC‑TTTTTTTTTTTAAAAAACCCGGCGCCATACCGTTGT‑ccctaa                                                                                                                                                                                                     >  2:1630633/1‑212 (MQ=255)

                                                                   ccACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGATCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTTTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAc                                                                                                                                                                              >  1:1374571/1‑238 (MQ=255)

                                                                     aCTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGGCCGTTTGCACAACCA‑GGCGGGGTAGGCGTTGTCCTCCAACCGGGCTTTTGTCATTTTCTCTTTTGAAA‑AATCCGGCGCCATAACGGTTA‑CCTTAAT‑TTTTTTGCGCGCCAGccccacac                                                                                                                                                                            >  2:1337539/1‑231 (MQ=255)

                                                                            tGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑Ccg                                                                                                                                                                  <  1:971894/239‑1 (MQ=255)

                                                                                gccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGGGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCCCATG‑CCGCggg                                                                                                                                                              >  1:1627199/1‑239 (MQ=255)

                                                                                 ccATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGGGCAATACCGGTGA‑CCTGAAT‑ATTTTGGCGCGCCAGCTCGAC‑GCACATG‑CCCCGGGt                                                                                                                                                             >  1:288525/1‑239 (MQ=255)

                                                                                  cATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTg                                                                                                                                                            <  1:823265/239‑1 (MQ=255)

                                                                                       acaaaacaCAGGGGGCCGTTTACGGAGTCGGAGGCTTTGGAAGGAAGGGACCCCCCGAGTCCCAA‑CACTTCCCGCGGCTCTCGCCGGGCGGCGCCCGCGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCGGCGGCCTCAACCCGTGCTTTAGTCA‑TTTCTGGTTTGAAAGAGCCGGGCGCCATGCCGTTGA‑CTTGTAT‑ATTGGCCGGCGCCAGCTCGAG‑GCATATG‑CCGCGGGTGAG‑ctt                                                                                                                                                      <  2:1839079/239‑3 (MQ=255)

                                                                                           acaacaGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGtt                                                                                                                                                                                                              >  1:963395/1‑184 (MQ=255)

                                                                                           acaacaGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGtt                                                                                                                                                                                                              <  2:963395/184‑1 (MQ=255)

                                                                                           acaacaGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGGCCGTTTGCACAACCA‑GGCGGTGAAAGGCTCCTCCTCAACCAGAGCTTTAGTCC‑TTTCCGTTTTTTAAAAGCCCGGCGCACAACCGTTGT‑CCTGAATGATTTGTGCG‑GCCAGCCCGAC‑GCACACGCCCGCggggggctttttt                                                                                                                                                    >  2:1082384/1‑229 (MQ=255)

                                                                                                  gTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGGCCGTTTGCCCAACCA‑GGCGGGGGAGGCCTCCTCCCCAACCCGTGCTTTTGTCA‑TTTTTGGTTTGAAAAAGGCCGGCGCCATAACGTTGA‑CCTGAAT‑AATTTTGCGCGGCAACTCCACGGCAC‑TG‑CCCCGGGGGGGCCATTTTTAcgcc                                                                                                                                             >  2:1673939/1‑235 (MQ=255)

                                                                                                   tGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCg                                                                                                                                              <  1:318021/235‑1 (MQ=255)

                                                                                                   tGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCg                                                                                                                                              <  1:695125/235‑1 (MQ=255)

                                                                                                       cGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑Ca                                                                                                                                                       >  1:1683784/1‑222 (MQ=255)

                                                                                                           tACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATCCCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATg                                                                                                                                  <  2:617389/239‑1 (MQ=255)

                                                                                                           tACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATg                                                                                                                                  <  1:1773929/239‑1 (MQ=255)

                                                                                                            aCGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGc                                                                                                                                 <  1:1337539/239‑1 (MQ=255)

                                                                                                            aCGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGc                                                                                                                                 <  1:1323498/239‑1 (MQ=255)

                                                                                                                  tCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATa                                                                                                                           <  1:67723/239‑1 (MQ=255)

                                                                                                                       ggCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGGGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGGG‑CATTTTTGCCGCCCCTTTCGATGCGGCATAAg                                                                                                                         <  1:1210756/236‑1 (MQ=255)

                                                                                                                        gCTGTTGAAGAAAGGACCACCGC‑AGCACCAAGCAGTTCCGGCGGACCTCCCCAGCGTGCGGCGAGGGTCCGTTTGCACAACCA‑GGCGGGGAAGCCTTCGGCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTGGAAATAGCCCGGCGCAGTACCGTTGA‑CCTGAAT‑ATTTTGTCGCTCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTGACCGCCCCTTTCGATGCGGCATAAgggg                                                                                                                      <  2:798824/238‑1 (MQ=255)

                                                                                                                                    aGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCCAACCGTGCTTTAGTTC‑TTTCTGTTTTGAAATAACCCGGCGCAATACCCTTTA‑CCCGCAT‑ATTTTGGCGCGCCAACCCGAC‑GCCCATA‑CCCCGGGGGGG‑ACTTTTTACCCCCCCCTTCCATGGGAGACAAggggggg                                                                                                                   >  2:1237290/1‑226 (MQ=255)

                                                                                                                                    aGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGc                                                                                                                                 >  1:380578/1‑215 (MQ=255)

                                                                                                                                    aGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGGGAAAGCCTCCGCCTCCACCCGTGCTTTTGTCA‑TTTCTGTTTTTAAAAAGCCCGGCCCAATACCCTTTACCCTAAAT‑TTTTGGGCGCCCCA‑CCCCAC‑GCACCTT‑CCCCGGGGGGG‑CATTTTTTCCGCCCCCTTCGCTTCGGCAAAAGGGGGGGTGGGGT‑cccc                                                                                                        >  2:1830541/1‑236 (MQ=255)

                                                                                                                                       aaCACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCgg                                                                                                                               <  1:449904/214‑1 (MQ=255)

                                                                                                                                       aaCACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGGGGAAGCCTCTTCCTCCACCCGTGGTTTATTCC‑TTTTTGGTTTGAAAAAGCCCGGCGCAATAACGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCCCGCC‑GCAACTG‑CCCCGGGGGTG‑CCTTTTTTACGCCCCCTTCCGTGCGGCCCAAAGGGGGgtggtggtccggt                                                                                                       >  2:103935/1‑231 (MQ=255)

                                                                                                                                           ccGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGt                                                                                                 <  1:1673939/239‑1 (MQ=255)

                                                                                                                                            cGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATa                                                                                                                           <  1:827120/213‑1 (MQ=255)

                                                                                                                                                  caCCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTgg                                                                                                                                                                                            <  1:1709502/146‑1 (MQ=255)

                                                                                                                                                   aCCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCt                                                                                            <  1:1607996/237‑1 (MQ=255)

                                                                                                                                                      aaTCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCa                                                                                       <  1:103935/239‑1 (MQ=255)

                                                                                                                                                       ctCAGTTCCTGCGGATCTCCCCAGCTTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGTTGAAGGCTTCTTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAT‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCAt                                                                                      <  2:1374571/238‑1 (MQ=255)

                                                                                                                                                       aTCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCAt                                                                                      <  1:207093/239‑1 (MQ=255)

                                                                                                                                                            ttCCGGCGGATTTCCTCCGGGTCCGGCGGGGGTCCGTTTGCAAAACCG‑GGCGGTGAAGGCTCCGTCCCCAACCAGTGCTTTAGACA‑TTTCGGTTGTCAAATGGCCCGGCGCAATGCCGTGGA‑CCTGAAT‑TTTGTGGGCCGCCGGCTCGAC‑GCCCATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CTTGTCCCAGTTCGCTTGGCATCGAg                                                                                  <  2:1302525/238‑1 (MQ=255)

                                                                                                                                                             tCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCa                                                                                <  1:852958/239‑1 (MQ=255)

                                                                                                                                                              ccTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCaa                                                                               <  1:145389/239‑1 (MQ=255)

                                                                                                                                                                     agctcagcAGGGTGCGGGGGGGGTCCGTTTGCTCTCCTG‑GGCGGTGAAGGCTTCGTCCTCAAGCAGTGCTTTTGTCA‑TTCCTGTTTCGAAATAGCCCGGCGCAATACCGTTGC‑CCTAAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGGG‑CATTTTTCCCGCTCCTTTCGATGCGGCATAAGGGGTGATGGTGA‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATta                                                                         <  2:318869/231‑1 (MQ=255)

                                                                                                                                                                      tctcCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGGGAAGGCCTCGTCCTCCAACAGCGCTTTAGTCA‑TTTCTGTTTTGAAATAGACCGGCGCAATACCGTTGA‑CCTGAAT‑ATTTTGGCGCGCCAGCTCGAC‑GCCCCTT‑CCCCCGGGGAG‑CATTTTTTCCGGCCCCTTCGATACGGCATCAAGGGGGGTGGGGT‑CAAGTCCCAGTTCGCCTTTCATCGCGCAAATATtaat                                                                       >  2:1836224/1‑239 (MQ=255)

                                                                                                                                                                       ctcCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CAt                                                                                                                                                      <  1:1516457/160‑1 (MQ=255)

                                                                                                                                                                               cGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGc                                                                                 >  1:631514/1‑220 (MQ=255)

                                                                                                                                                                               cGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGc                                                                                 <  2:631514/220‑1 (MQ=255)

                                                                                                                                                                               cGTGCGGCGGGGGGCCGTTTGCACAACCA‑GGCGGCGAAGGCCTCGTCCTCCACCAGTGCTTTTGTCA‑TTTCTGGTTTGAAATAGCCCCGCGCCAAAACGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCCCC‑GCACATT‑CCGCGGGGGAG‑CATTTTTTCCGCCCCCTTCCATGCCGCCTAAGGGGGGGTGGGGT‑TCCGTCCCAGGTCTCTTTGCTACGAGCCAAAATTAATAACTTTAc                                                               >  2:1056339/1‑238 (MQ=255)

                                                                                                                                                                                 tGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑c                                                                                                                                                                                                          <  2:446611/102‑1 (MQ=255)

                                                                                                                                                                                    ggcggGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGT‑CCTGAAT‑ATTGTGGGGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTGCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGcc                                                          <  1:1067920/238‑1 (MQ=255)

                                                                                                                                                                                    ggcggGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGcc                                                          <  1:459159/238‑1 (MQ=255)

                                                                                                                                                                                    ggcggGGGTCCGTTTGCACAACCA‑GGCGGGGAAGGCCTCCTCCCCAAACAGGGCTTTAGTTA‑TTTCTGTTTTGAAATAACCCGGCGCCAAACCCTTGA‑CCCGAAT‑ATTTTGGCGCGCCAGCCCGAA‑GCACATT‑CCCCGGGGGAG‑GAATTTTACCGCCCCTTTCGATGCGGCCTAAGGGGGGGGGGTGTCCACG‑CCCAGGTCGCCTTTGATCGGGCAAATATTAAAAACTTTAACTGc                                                           >  2:721921/1‑237 (MQ=255)

                                                                                                                                                                                      cggGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCtt                                                        <  1:628062/238‑1 (MQ=255)

                                                                                                                                                                                       gggcgTCCGTTTGCACAACCA‑GGCGGTGAAGCCTTCGTGCTCACCCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATGGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CCCGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTg                                                       <  2:1679337/238‑1 (MQ=255)

                                                                                                                                                                                          ggTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGt                                                    <  1:223989/238‑1 (MQ=255)

                                                                                                                                                                                                     acaACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCAtgtg                                         >  1:629213/1‑238 (MQ=255)

                                                                                                                                                                                                          cA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGt                                   <  1:721921/239‑1 (MQ=255)

                                                                                                                                                                                                          cA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGt                                   >  1:118293/1‑239 (MQ=255)

                                                                                                                                                                                                               cGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTAcc                               >  1:100854/1‑239 (MQ=255)

                                                                                                                                                                                                                ggTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCg                              <  1:1082384/239‑1 (MQ=255)

                                                                                                                                                                                                                            gTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAg                                                                                  >  1:445074/1‑175 (MQ=255)

                                                                                                                                                                                                                            gTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAg                                                                                  <  2:445074/175‑1 (MQ=255)

                                                                                                                                                                                                                                 cAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGAGGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATGTTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAac             >  1:79982/1‑239 (MQ=255)

                                                                                                                                                                                                                                  aaCCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAac             >  1:662494/1‑238 (MQ=255)

                                                                                                                                                                                                                                    ccggttcTTTAGTCA‑TTTCTGTTTTGAAATCGCCCGGCGCAATCCCGTTGC‑CCTGATT‑ATTGTGGCCCGCCAGTTCGAC‑GACCGTG‑CCGCGGGTGAT‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACAcg          <  2:427574/233‑1 (MQ=255)

                                                                                                                                                                                                                                     cAGTTCTTTAGTCA‑TTTCTGTTTTTAAATAGCCCGGCGCAATACCTTTGA‑CCTGAAT‑ATTGTGGCTCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACAcgg         <  1:1508870/239‑1 (MQ=255)

                                                                                                                                                                                                                                        tGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATtaat                                                                       <  1:947439/174‑1 (MQ=255)

                                                                                                                                                                                                                                         gCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACAcggcg       <  1:1347609/237‑1 (MQ=255)

                                                                                                                                                                                                                                          cTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACAcggcgg      >  1:983812/1‑237 (MQ=255)

                                                                                                                                                                                                                                            ttAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAAc                                               <  1:306501/194‑1 (MQ=255)

                                                                                                                                                                                                                                            ttAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTg  >  1:1234381/1‑239 (MQ=255)

                                                                                                                                                                                                                                             tAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATta                                                                         >  2:498095/1‑167 (MQ=255)

                                                                                                                                                                                                                                             tAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATta                                                                         <  1:498095/167‑1 (MQ=255)

CTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGC‑TGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGAAAGGAACACCGC‑AGCACCAATCAGTTCCTGCGGATCTCCCCAGCGTGCGGCGGGGGTCCGTTTGCACAACCA‑GGCGGTGAAGGCTTCGTCCTCAACCAGTGCTTTAGTCA‑TTTCTGTTTTGAAATAGCCCGGCGCAATACCGTTGA‑CCTGAAT‑ATTGTGGCGCGCCAGCTCGAC‑GCACATG‑CCGCGGGTGAG‑CATTTTTACCGCCCCTTTCGATGCGGCATAAGGGGTGATGGTGT‑CACGTCCCAGTTCGCTTTGCATCGAGCAAATATTAATAACTTTACCTGCCTTGCGTTCAACCATGTGACGAGTTACCGCTTGCGATACCAGGAACACGGCGGTCTG  >  NC_007779/4497209‑4497680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`