Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,205,132 G→A 11.6% S5N (AGT→AAT)  ttdA → L(+)‑tartrate dehydratase subunit alpha

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077793,205,1320GA11.6% 213.2 / 2.9 105S5N (AGT→AAT) ttdAL(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base G (27/58);  new base A (10/2);  total (37/68)
Fisher's exact test for biased strand distribution p-value = 9.39e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 105 total aligned reads displayed.

CAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGG  >  NC_007779/3204899‑3205369
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                     
cAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGtaat                                                                                                                                                                                                                                                   <  1:965922/238‑1 (MQ=255)
cAGCTATTCAGACTCGTTAATTATCCGAAGTTGTGATAAGCTAAGAGTATATCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCTTTGATTCACGAACTCTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAAACTCATGTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGATCGAAAGtaat                                                                                                                                                                                                                                                   <  2:643002/238‑1 (MQ=255)
  gCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTT‑TTTTAGACAAAAAAAAAAAAAGGGGTTTCCATGA‑TGAGCGGAAGtaataaa                                                                                                                                                                                                                                                >  1:747860/1‑238 (MQ=255)
     aTTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑aa                                                                                                                                                                                                                                            <  1:442648/239‑1 (MQ=255)
      ttCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AAc                                                                                                                                                                                                                                           <  1:1839967/239‑1 (MQ=255)
            aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCa                                                                                                                                                                                                                                      <  1:1157086/238‑1 (MQ=255)
            aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCa                                                                                                                                                                                                                                      <  2:1138431/238‑1 (MQ=255)
              cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGc                                                                                                                                                                                                                                       <  1:437637/235‑1 (MQ=255)
               gTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAgg                                                                                                                                                                                                                                        <  1:15674/233‑1 (MQ=255)
                 tAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGa‑a                                                                                                                                                                                                                                <  2:788618/238‑1 (MQ=255)
                  aaTTATCCGCAGTTGTGATAAGCGCATTGTATTTCGCTAAACATTGCCTTTCCCTGGTCTGTCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATa                                                                                                                                                                                                                              <  2:1817954/239‑1 (MQ=255)
                  aaTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATa                                                                                                                                                                                                                              <  1:167729/239‑1 (MQ=255)
                        ccGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATT‑TTTCAGACAAACAAAAAAACTGGAGGTGTCGTGT‑TGGGCGAAAGGAATAAAA‑AAAAAGCAAAGA‑ATaaaaatg                                                                                                                                                                                                                        >  2:437637/1‑234 (MQ=255)
                         cGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAAAAAAAAAAGGAGTTGTCATGA‑TGAGCGAAAGTAATAAAC‑AAAAAACAGTGA‑AAAAATTGAc                                                                                                                                                                                                                       >  1:1724356/1‑239 (MQ=255)
                          gCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGAG‑AATTT‑TTTCTGACAAATACAAAAAAAAGAGATGGCATCA‑TTAGCGAAAGGAATAAAC‑AAAAAGCAGTGA‑ATaaagttaca                                                                                                                                                                                                                      >  1:181245/1‑232 (MQ=255)
                               tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAgaga                                                                                                                                                                                                                  <  1:181094/238‑1 (MQ=255)
                                   aTAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAgg                                                                                                                                                                                                                                        <  1:999140/213‑1 (MQ=255)
                                      aGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGAAAAATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTGGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGGGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGGTGCCAGAGATTG‑T‑CGCt                                                                                                                                                                                                        <  2:1180613/239‑1 (MQ=255)
                                        cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAATACAAAAACTGGAGTTTCTATGA‑TGAGCGAAAGTAATAAGC‑AAAAAGCAGTGA‑ATAAGTTGACAGAGATTA‑T‑CGcca                                                                                                                                                                                                       >  1:1237323/1‑236 (MQ=255)
                                        cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAAAAAAAAATAGAGTTGCCATGA‑TGAGGGGAAATAATAAAA‑AAAAAGCAGAGA‑ATAAAATGAAAGAGATTT‑T‑TGCT‑a                                                                                                                                                                                                      >  1:1472552/1‑238 (MQ=255)
                                             tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTCATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCCAACAAATAAAAAAAAAGGAGTTGGCCTGA‑TGAGCGGAAAGAAAAAAA‑AAAAAGCAGGGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTa                                                                                                                                                                                                >  1:1197928/1‑239 (MQ=255)
                                               tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGtt                                                                                                                                                                                                                          <  1:1166777/214‑1 (MQ=255)
                                                         aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAAAAAAAAAAGGAGTTGGCATGA‑TGAGCGAAAGTAATAAAA‑AAAAAGCAGTGA‑ATAAATTGACAGAGAATG‑T‑TGCT‑CACTTTACCGCCATG‑Attt                                                                                                                                                                                   >  1:306274/1‑239 (MQ=255)
                                                              tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTT‑TTTCA‑TCAAATACAAAAAAAGGAGTTGGCCTGA‑TGGGCGGAAAAAATAAAA‑AAAAAGCAATGA‑AAAAATTGACAAAGATTT‑T‑TGCG‑AAATTTACCCCCCTG‑ATTTTTat                                                                                                                                                                               >  1:114036/1‑237 (MQ=255)
                                                              tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCTTGCAAAAACAAAAACATGAGGTGCCGTGG‑GGAGAGAAAATAATAAAC‑AACAGGCAGTGA‑ATTAGGTGACAGAGTCTT‑T‑CCTT‑ACCATTACCGCCACG‑ATTGCTAc                                                                                                                                                                               >  1:606766/1‑238 (MQ=255)
                                                                ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAGAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAg                                                                                                                                                                                                                            <  1:1305632/195‑1 (MQ=255)
                                                                 cATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGa                                                                                                                                                                           <  1:341664/239‑1 (MQ=255)
                                                                  aTTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATAAAAAAACTGGAGTTGCCATGA‑GGAGCGAAAGTAATAAGC‑AACAGGCAGTAA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGaa                                                                                                                                                                          <  1:820227/239‑1 (MQ=255)
                                                                  aTTCCCTGCTCTGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGGGGTAGTTTGGGGCGGTG‑AATTT‑TTCAAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGaa                                                                                                                                                                          <  1:1715833/239‑1 (MQ=255)
                                                                        tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAgg                                                                                                                                                                                                                                        <  1:558326/176‑1 (MQ=255)
                                                                         gCTCTGGCGCAATATTCATTCTTATTTTCGCTTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAACCCACTTTTTTAGTGGTAGTTTGTGGGGGTG‑AATTT‑TTCCAGCCAAATCCAAAACTGGGAGTTGCCATTA‑GGTGCGAAAGTAATAAGC‑AACAGGAAGTAA‑AAAAGTTGACGGATTTTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCtga                                                                                                                                                                   <  1:199979/239‑1 (MQ=255)
                                                                           tctGGCCAAATTTTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATCAAGGGTGGCAAAAAAT‑AAAAAACCACATTTTTAGTGGTAGTTTGCGGCGGTG‑AATTT‑TTCCACACAAATAAAAAAACTGGAGTTGCCATGG‑TGAGAGAAAGTAATAAGC‑ACCAGGCAGTAA‑ATAATTAGACAGAGATTG‑G‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCtgatg                                                                                                                                                                 <  1:742396/239‑1 (MQ=255)
                                                                               gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTT‑TTTCATACAAAAAAAAAAAATGGAGGTTGCATGAGTGGAGGAAAAGAAAAAAA‑AAAAAACA‑AGA‑AAAAAATGATAGAGATTG‑T‑AGCT‑AACTTTACCCCCCTG‑CTTTTTACCCGAATAGCTGATGACgt                                                                                                                                                             >  2:1794315/1‑239 (MQ=255)
                                                                               gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAACAAAAACTCGGGTTGTCATGA‑TGAGCGAAAGGAAAAAAC‑AAAAGGCAAAGA‑AAAAATTGACAGAGATTG‑T‑GGCT‑AACTTTACCCCCATG‑ATTTTTACCCCAATGCCCGATGACgt                                                                                                                                                             >  1:720629/1‑239 (MQ=255)
                                                                               gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATT‑TTTCAGACAAAAACAAAAAAAGGAGGTGCCCTGA‑TGGGCGAAAGTAATAAAC‑AAAAAGCAGTGA‑AAAAATTGACAGAGATTG‑T‑CGCT‑AACTTTACCCCCCTG‑Att                                                                                                                                                                                    >  1:1443873/1‑216 (MQ=255)
                                                                                cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAATACAAAAAATGGAGGTGGCCTGA‑GGAGGGAAAGGAATAAGC‑AAAAAGGAGGGG‑ATAAGTTGACACAGATTT‑TGCGC‑‑AACTTTTCCCCCCTGTTTTTTTACCCCAAAGCCT‑ATGACgtg                                                                                                                                                            >  1:884123/1‑239 (MQ=255)
                                                                                 gcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGGGGTATTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATACAAAAACTGGAGTTGCCATGA‑TGAGCAAAAGTAAAAAGC‑AACAGGCGGGAA‑AAAAGTGGACAGAGATTG‑T‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACgtg                                                                                                                                                            <  1:261700/238‑1 (MQ=255)
                                                                                   aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCt                                                                                                                                                                                 <  1:90242/215‑1 (MQ=255)
                                                                                     tatTCATTTTTATTTTCGATTTGATTCCCAAACTTTTAATTACATATGCAGGGTGAAAAAAAAT‑AAAAAACCAAATTTTTAGTGTTAGTTGGGGGCGGTG‑AATTT‑TTCCAGAAAAAAAAAAAAACTGGAGTGGCCAGAA‑TGGGAAAAAGAAAAAAGC‑ACAAGGAAGTAA‑ATAATTGAACAGAGTTTG‑C‑CGTT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                       <  2:114036/239‑1 (MQ=255)
                                                                                     tatTCATTCTTATTTTCGCGTTGATTCACGAATTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCAATGA‑TGAGCGAAAGTAAAAAGC‑AACAGGCAGTAA‑ATAAGTTGACAGAGATTG‑T‑CGTT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                       <  1:85661/239‑1 (MQ=255)
                                                                                     tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                       <  1:1794315/239‑1 (MQ=255)
                                                                                     tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGG‑GAATT‑TTTCAGACAAAAACAAAAAAAGGAGGTGTCATGT‑TGAGAGAAAATAAAAAAA‑AAAAAACAGAGA‑ATAAAATGAAAGAGATAG‑T‑GGCC‑AACATTACCACCACG‑ATTTCTACCCGAATGCCTGATAAGGTGGGGGa                                                                                                                                                       >  2:708509/1‑239 (MQ=255)
                                                                                               tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGAAAAATAAAAAAAAAGGAGTTGGCATGA‑TGAGGGAAAGTAAAAAAC‑AAAAAGAAGAGA‑AAAAATTGACAGAGATTG‑T‑CGCTAAACTTTA‑CGCCATG‑ATTTTTACCCGAAAGCCTCATGAAGTGGGGGATAaaaaaaaa                                                                                                                                             >  1:1456224/1‑239 (MQ=255)
                                                                                               tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATAAAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                             <  1:708509/239‑1 (MQ=255)
                                                                                               tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAAT‑AAAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTG‑AATTT‑TTCAAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                             <  1:1065028/239‑1 (MQ=255)
                                                                                                aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAACAAAAAATGGGGTTTGCATGA‑TGTGGGAAAGTAAAAAGA‑AAAAGGCAGTGA‑ATAAATTGACAGAGAATG‑T‑TGCT‑AACTTTTACGCCATG‑ATTTTTACCCCAATTCCtgatg                                                                                                                                                                 >  1:1476876/1‑218 (MQ=255)
                                                                                                          taaTTCACGAACTGTTATTTACATATTCACGGTGGAAAAAAAT‑ATAAAACCAATTTTTAAGTGGTGGTTTGTGGCGTTG‑ATTTT‑TACCAGCCAAATACAAAACCGGTATTTGCCATGA‑TGAGCAAAATAAAAAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGTT‑ATCTTTTCCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAgg                                                                                                                                  <  1:226313/236‑1 (MQ=255)
                                                                                                                        ttaattaaATATTCAGGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTG‑AATTT‑TTCCAAACAAATAAAAAAACGGGAGTTGCCATGT‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGTT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCtgatg                                                                                                                                                                 <  1:376381/194‑1 (MQ=255)
                                                                                                                        ttAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCCGACAAAAACAAAAAATGGGGTTGGCATGA‑TGAGCGGAAGTAATAAAC‑AAAAAGCAGTGA‑ATAAGTTGACAGAGAATG‑T‑CGCT‑AAATTTACCCCCATG‑ATTTTTACCCGAATGCCTGATGAAGTGGTGGGtaaaataaaa                                                                                                                                             >  1:443298/1‑214 (MQ=255)
                                                                                                                        ttAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGAt                                                                                                                                                                                                                 <  1:670032/150‑1 (MQ=255)
                                                                                                                        ttAATTACATATTCACGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTGGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAGGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCtgatg                                                                                                                                                                 <  1:889832/194‑1 (MQ=255)
                                                                                                                                atatTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGG‑AAATT‑TTTTAAAAAAAAAAAAAAAAAGGAGGTGGCATGG‑GGAGGGAAAATAAAAAACAAAAAGACAAGAA‑AAAAGTT‑AAAGAGAATGTT‑GGCT‑AA‑ATTAACGCCCAG‑ATTTTTATCCTAAAACCTGATTACGGGGTGGTAAAAATAAAAAAACTAAAAGGATG‑CGGAAAAGGC‑TCGATgggg                                                                                                          >  2:1688847/1‑239 (MQ=255)
                                                                                                                                atatTCACGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTGGTTTGGGGCGGTG‑AATTT‑TTCCAGAAAAATACAAAAACTGGATTTGCCATGA‑TGAGCAAAAGAAAAAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATGG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAAt                                                                                                                                                                         <  1:31142/178‑1 (MQ=255)
                                                                                                                                 tatTTAGGGTGAAAAAAAAT‑AAAAACCCACATTTTTAGTGGTGTTTTGTGGCGGTA‑AATTT‑TTCCAAAAAAAAAAAAAAACTGTGTTTCCGTTGA‑TGGGCAAAATAAATAACC‑AACGTGCAGTAA‑ATAGTTTAACAGATTTTG‑C‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGa                                                                                                         <  2:1722856/239‑1 (MQ=255)
                                                                                                                                 tatTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATACAAAAACGGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑ACCTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGa                                                                                                         <  1:905265/239‑1 (MQ=255)
                                                                                                                                 tatTCACGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTA‑AATTT‑TTCCAGACAAATAAAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGa                                                                                                         <  1:1214955/239‑1 (MQ=255)
                                                                                                                                  atTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTT‑TTTCCAACAAATACAAAAACTGGGGTTGCCCTGA‑TGAGCGGAAGGAATAAAC‑AAAAAGCAGTGA‑ATAAAATGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCCTG‑ATTTTTACCCCAATGCCTGTTGACGGGGGGGGTAAAATAAAAAAAAT‑AAAAGAAG‑CCGAAACATCGTCGGTGGGGaa                                                                                                        >  1:1632709/1‑239 (MQ=255)
                                                                                                                                  atTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAATACAAAAAATGGAGTTGCCATGA‑TGAGGGGAAGGAAAAAAC‑AACAAGCAGGGA‑AAAAAGTGACAGAGATTG‑T‑TGCT‑AAATTTAACCCCCTG‑ATTTTTTCCCCAAAGGCTGATGACGGGGGGGGTAAACTAAAAAAACT‑AAAAGAAG‑CCCAAAAGGCGTCGAGGGGGaa                                                                                                        >  1:1379428/1‑239 (MQ=255)
                                                                                                                                  atTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATT‑TTTCCGACAAATAACAAAAATGGGGTTTCCATGA‑TGAGCGGAAGAAATAAGC‑AACAGGCAGAGA‑ATAAATTGACAGAGATTG‑T‑CGCT‑AACTTTTCCGCCACG‑ATTTTTACCCCAAAACCGGATGACGGGGGGGGTAAACTAAAAAAACT‑AAAGGATT‑CCGAAACGTCGGCGGTGGGGaa                                                                                                        >  1:1442619/1‑239 (MQ=255)
                                                                                                                                      gtataaaagaaaaaa‑aaaaaaCCTCATTTTTAGGGGTGTTTTGTGGCGGTA‑AATTT‑TTCCAAAAAAAAACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCGGTAA‑ATAAGTTAAAAGAGTTTG‑T‑CGTT‑ATTTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAAtt                                                                                                    <  2:878920/230‑1 (MQ=255)
                                                                                                                                      aCGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAAtt                                                                                                    <  1:1218097/239‑1 (MQ=255)
                                                                                                                                        ggTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATAT‑TTTTAAACAAAAAAAAAAAATGGAGTTGGCATGA‑TTGACGGAAATAAAAAAA‑AAAAAGAAGTGA‑ATAAAATGAAAGAGAATG‑T‑TGAT‑TAATTTAACACCCAG‑ATTTCTAACCCAATACCTGATGACGGGGTGGGTTACATAAAAAATCT‑AAAAGAAG‑CTAAAACATTGTTGATGGGGGAAATTAt                                                                                                  >  2:809249/1‑239 (MQ=255)
                                                                                                                                         gTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTT‑TTTCCGACAAAAACAAAAAATGGAGATTTCCTGA‑TGAGCGGAAGTAATAAAA‑AACAGGCAGGGA‑ATAAGTTGACAGAGAATG‑T‑CGCT‑AAATTTTTCCCCATG‑ATTTTTAACCCAAAGGCTGATTACGGGGGGGGTAAAATAAAAAAAAT‑AAAAGATGCCCGAAAC‑TCGTCGATggggggaaatata                                                                                                 >  1:1722856/1‑230 (MQ=255)
                                                                                                                                         gTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTTCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                  <  1:1688847/238‑1 (MQ=255)
                                                                                                                                         gTGGAAAAAAAA‑AAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAAAACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                  <  1:520009/238‑1 (MQ=255)
                                                                                                                                          tGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATT‑TTTTAAAAAAAAAAAAAAAAAGGAGGTGGCCTGA‑TGGGCTGAAATAATAAAA‑AAAAAAAAACGG‑ATAAGATTAAAGAGAATG‑T‑TGCT‑AAATTTATCGCCATG‑ATTTTTTACCCAATGCCTGATGAGGGGGGGGATAAACAAAAAAAACT‑AAAGGATG‑CCGAAAACGCGTCGACGGTGGAaataattt                                                                                                >  2:1214955/1‑237 (MQ=255)
                                                                                                                                          tGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATAAAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGA‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGa                                                                                                         <  1:1726654/230‑1 (MQ=255)
                                                                                                                                              aaaaaaTAAAAAAACAAAATTTTTAGGGGTGTTTGGTGGCGGGA‑AATTT‑TCCCAGAAAAAAACAAAAACAGGGGTTGCAATGA‑TGGGAGAAATAAATAACC‑AACGGGTAGTGA‑ATAAGTGGACAGATATTG‑T‑GGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTAcc                                                                                             <  2:653129/239‑1 (MQ=255)
                                                                                                                                                aaaaa‑aTAAAACAACATTTTTATTGATGGTTGGTGGCGGTG‑AATTT‑TCCCGGAAAAAAACAAAACTGGGAGTGGCTATGT‑GGAGAGAAACAAAAAGAA‑AAAAGGCAGTAA‑AAAAGTTGAAAGAGATTG‑T‑CTCT‑ACTTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATa                                                                                          <  1:126358/239‑1 (MQ=255)
                                                                                                                                                          gaaagcaTTTTTAGGGGTAGTTTGGGGGGGTA‑AATTT‑TTCCAAACAAATAAAAAAACGGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGA‑AACAGGCAGTAA‑ATAATTTGACAGAGATTG‑T‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGtt                                                                                   <  1:565783/232‑1 (MQ=255)
                                                                                                                                                              cattttttATTGGTAGTTTG‑GGGGGTGTAATTT‑TTCCAAACAAATAAAAAAATTGAGGTTGCGATGA‑TGAGCGAAATTAACACTA‑GACCGCTCGTCA‑ATAGGGTCAGAGGTGTTT‑T‑CGAG‑ACATGTTCCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAACCAGCT‑AAAGGATG‑CCGAAACGTCGGCGATGGGGAAAATTATATGCCATGCGATGTTCGccaa                                                                             <  2:181245/236‑1 (MQ=255)
                                                                                                                                                              acaTTTTTGGTGGTAGTTGGGGGCGGAG‑AATTT‑TTCAAGAAAAATACAAAAACTGGAGTGGCCATGA‑GGAGGGAAAGTAATAACC‑AACGGGCAGTGA‑ATAATTAAAAAGAGATTG‑A‑CGTT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                                             <  2:1197928/239‑1 (MQ=255)
                                                                                                                                                               caTTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAAAAAAAAATGGAGTTGCCATGA‑TGAGCGGAAAGAATAAAC‑AACAAGCAGGGA‑AAAAAATGACAGAGATTG‑T‑CGCT‑AACATTACCGCCCTG‑ATTTTTACCCCAATACCTGATTAAGTGGTGGATAAACTAAAAAAACT‑AAAAGATG‑CCGAAACGTCGTCGATGGGGGAAATTATCTACCaaa                                                                                          >  1:878920/1‑223 (MQ=255)
                                                                                                                                                                aTTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATAAAAAAACTGGAGTTGCCATGA‑GGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGa                                                                                                         <  1:526289/209‑1 (MQ=255)
                                                                                                                                                                  ttttAGTGGTAGTTTGGGGCGGTG‑AATTT‑TCCCAGAAAAATAAAAAAACTGGAGTTGCTATGA‑TGAGCGAAAGAAATAAGC‑ACCAGGCAGTGA‑ATAAGTTGACAGAGATGT‑T‑CTTT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATg                                                                         <  1:981150/239‑1 (MQ=255)
                                                                                                                                                                    ttAGTGGTAGTTTGTGGCGGTA‑AATTT‑TCCCAAAAAAATACAAAAACTGGATTCGCCAGGA‑TGAGAAAAAGTAAAAAGC‑AACGGGCGGGAA‑AAAAGTGGAAAGAGATTG‑T‑CGCA‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCa                                                                       <  1:993382/239‑1 (MQ=255)
                                                                                                                                                                            aGTTTGGGGGGGTG‑AATTT‑TTCCAAAAAAAAACAAAAACTGGAGTTGCCAATA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTAA‑ATAAGTTGACAGAGTTTG‑T‑CGTT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                               <  2:744373/239‑1 (MQ=255)
                                                                                                                                                                             gTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                             <  1:637382/162‑1 (MQ=255)
                                                                                                                                                                             atttGTTGGGGTT‑AATTTATTCAAAAAAAATACAAAAACGGGAGTCGCGATGA‑TGAGCAAAAATAATAGGC‑AGCAGACAGTAA‑ATAGGTGGAAGTTAATTG‑T‑CTCT‑AACGTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                               <  2:884123/238‑1 (MQ=255)
                                                                                                                                                                                  ggggtgTG‑AATTA‑TTCAAGAAAAAAACAAAAGCGGGAGTTTCCATGA‑TGAGATAAAGTAATAAGC‑AACGGGCAGTGA‑ATAAGTTGACAGAGTTTG‑T‑CGGT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc                                                          <  2:1456224/233‑1 (MQ=255)
                                                                                                                                                                                      ggTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGa                                                      <  1:1729096/238‑1 (MQ=255)
                                                                                                                                                                                          aaaTTT‑TTCCAAAAAAATAAAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGA‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCg                                                  <  1:467363/238‑1 (MQ=255)
                                                                                                                                                                                               t‑ttCCAGAAAAATAAAAAAACTGGAGTTGCCATGA‑TGGGCGAAAGTAAAAAGC‑AACAGGCAGTAA‑ATAAGTTGACAGAGTTTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                             <  1:540667/239‑1 (MQ=255)
                                                                                                                                                                                               t‑ttCCAGAAAAATAAAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTAA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTAACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                             <  1:1477682/239‑1 (MQ=255)
                                                                                                                                                                                                gtacgagcaaaaGACAAAAACGGGAGGTGCGAAAA‑TGAGCGAAAGTAAAAACG‑AAGAGGCA‑TGATATTAGTTGACAGAGATTG‑G‑CAAT‑ATCATTACCGCCATG‑ATTTCTGCCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCACACGATGTTGGAGAACAAGCAAAAAGCGATTGACCCGAATCGTcctg                                             <  2:543538/230‑1 (MQ=255)
                                                                                                                                                                                                  tcaaGAAAAATAAAAAAACTGGAGTTGCCATGA‑TGAGCAAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcc                                           <  1:850556/236‑1 (MQ=255)
                                                                                                                                                                                                           aTACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGac                                  >  2:1326305/1‑239 (MQ=255)
                                                                                                                                                                                                           aTACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGac                                  >  1:1722573/1‑239 (MQ=255)
                                                                                                                                                                                                            taaaaaaaCTGGAGTGCCCGTGA‑TGGGCAAAACAAAAAAGC‑AAGAGGCAGTGA‑AAATGTTGACAGAATTTG‑G‑CTCT‑ACTTTGGCCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGaca                                 <  1:1514889/236‑1 (MQ=255)
                                                                                                                                                                                                                 aagcgggAGTTGCCATGT‑TGAAGAAAAGGAATAAGC‑AACAGGCAGTGA‑ATAAGTTAGAAGAGTTTT‑C‑GGCT‑AACTTAGCCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCggg                            <  2:1632709/234‑1 (MQ=255)
                                                                                                                                                                                                                 aaaCTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCggg                            >  1:1004015/1‑239 (MQ=255)
                                                                                                                                                                                                                  aaCTGGAGTTGCCAGGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTAA‑ATAAGTTGAAAGAGATTG‑T‑CGTT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                           <  1:1768294/239‑1 (MQ=255)
                                                                                                                                                                                                                  aaCTGGAGTTGCAATGA‑TGAACGAAATAAAAAAGA‑AACAGGCAGTGA‑AAAAGTTGACAGGGTTTG‑T‑CGTT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                           <  1:1041458/239‑1 (MQ=255)
                                                                                                                                                                                                                            gCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGa                                   >  1:1607696/1‑221 (MQ=255)
                                                                                                                                                                                                                            gCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGtt                 >  1:216602/1‑239 (MQ=255)
                                                                                                                                                                                                                            gCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt                  >  2:287048/1‑238 (MQ=255)
                                                                                                                                                                                                                                  a‑tgaGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGt           >  2:27965/1‑239 (MQ=255)
                                                                                                                                                                                                                                        cGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAAc                                                                                                                       >  1:1755260/1‑126 (MQ=255)
                                                                                                                                                                                                                                        cGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACGGGGGAGATTATGTTCTTCGTTAAAg      >  2:536103/1‑239 (MQ=255)
                                                                                                                                                                                                                                            aGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCgg  >  1:910559/1‑239 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                     
CAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACTGGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATG‑CCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGG  >  NC_007779/3204899‑3205369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑