Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,205,143 C→A 22.4% Q9K (CAG→AAG)  ttdA → L(+)‑tartrate dehydratase subunit alpha

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077793,205,1430CA22.4% 199.3 / 21.4 105Q9K (CAG→AAG) ttdAL(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (16/63);  new base A (21/3);  total (37/68)
Fisher's exact test for biased strand distribution p-value = 3.42e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 111 total aligned reads displayed.

TTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCC  >  NC_007779/3204905‑3205381
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                    
ttCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AAc                                                                                                                                                                                                                                                      <  1:1839967/239‑1 (MQ=255)
      aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCa                                                                                                                                                                                                                                                 <  1:1157086/238‑1 (MQ=255)
      aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCa                                                                                                                                                                                                                                                 <  2:1138431/238‑1 (MQ=255)
        cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGc                                                                                                                                                                                                                                                  <  1:437637/235‑1 (MQ=255)
         gTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAgg                                                                                                                                                                                                                                                   <  1:15674/233‑1 (MQ=255)
           tAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGa‑a                                                                                                                                                                                                                                           <  2:788618/238‑1 (MQ=255)
            aaTTATCCGCAGTTGTGATAAGCGCATTGTATTTCGCTAAACATTGCCTTTCCCTGGTCTGTCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATa                                                                                                                                                                                                                                         <  2:1817954/239‑1 (MQ=255)
            aaTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATa                                                                                                                                                                                                                                         <  1:167729/239‑1 (MQ=255)
                   cGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAAAAAAAAAA‑GGAGTTGTCATGA‑TGAGCGAAAGTAATAAAC‑AAAAAACAGTGA‑AAAAATTGAc                                                                                                                                                                                                                                  >  1:1724356/1‑239 (MQ=255)
                    gCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGAG‑AATTT‑TTTCTGACAAATACAAAAAAA‑AGAGATGGCATCA‑TTAGCGAAAGGAATAAAC‑AAAAAGCAGTGA‑ATaaagttaca                                                                                                                                                                                                                                 >  1:181245/1‑232 (MQ=255)
                         tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAgaga                                                                                                                                                                                                                             <  1:181094/238‑1 (MQ=255)
                             aTAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAgg                                                                                                                                                                                                                                                   <  1:999140/213‑1 (MQ=255)
                                aGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGAAAAATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTGGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGGGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGGTGCCAGAGATTG‑T‑CGCt                                                                                                                                                                                                                   <  2:1180613/239‑1 (MQ=255)
                                  cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAATACAAAAACT‑GGAGTTTCTATGA‑TGAGCGAAAGTAATAAGC‑AAAAAGCAGTGA‑ATAAGTTGACAGAGATTA‑T‑CGcca                                                                                                                                                                                                                  >  1:1237323/1‑236 (MQ=255)
                                  cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAAAAAAAAAT‑AGAGTTGCCATGA‑TGAGGGGAAATAATAAAA‑AAAAAGCAGAGA‑ATAAAATGAAAGAGATTT‑T‑TGCT‑a                                                                                                                                                                                                                 >  1:1472552/1‑238 (MQ=255)
                                       tgtATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTCATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCCAACAAATAAAAAAAAA‑GGAGTTGGCCTGA‑TGAGCGGAAAGAAAAAAA‑AAAAAGCAGGGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTa                                                                                                                                                                                                           >  1:1197928/1‑239 (MQ=255)
                                         tATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGtt                                                                                                                                                                                                                                     <  1:1166777/214‑1 (MQ=255)
                                                   aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAAAAAAAAAA‑GGAGTTGGCATGA‑TGAGCGAAAGTAATAAAA‑AAAAAGCAGTGA‑ATAAATTGACAGAGAATG‑T‑TGCT‑CACTTTACCGCCATG‑Attt                                                                                                                                                                                              >  1:306274/1‑239 (MQ=255)
                                                        tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTT‑TTTCA‑TCAAATACAAAAAAA‑GGAGTTGGCCTGA‑TGGGCGGAAAAAATAAAA‑AAAAAGCAATGA‑AAAAATTGACAAAGATTT‑T‑TGCG‑AAATTTACCCCCCTG‑ATTTTTat                                                                                                                                                                                          >  1:114036/1‑237 (MQ=255)
                                                        tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCTTGCAAAAACAAAAACA‑TGAGGTGCCGTGG‑GGAGAGAAAATAATAAAC‑AACAGGCAGTGA‑ATTAGGTGACAGAGTCTT‑T‑CCTT‑ACCATTACCGCCACG‑ATTGCTAc                                                                                                                                                                                          >  1:606766/1‑238 (MQ=255)
                                                          ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAGAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAg                                                                                                                                                                                                                                       <  1:1305632/195‑1 (MQ=255)
                                                            aTTCCCTGCTCTGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGGGGTAGTTTGGGGCGGTG‑AATTT‑TTCAAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGaa                                                                                                                                                                                     <  1:1715833/239‑1 (MQ=255)
                                                                   gCTCTGGCGCAATATTCATTCTTATTTTCGCTTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAACCCACTTTTTTAGTGGTAGTTTGTGGGGGTG‑AATTT‑TTCCAGCCAAATCCAAAACTG‑GGAGTTGCCATTA‑GGTGCGAAAGTAATAAGC‑AACAGGAAGTAA‑AAAAGTTGACGGATTTTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCtga                                                                                                                                                                              <  1:199979/239‑1 (MQ=255)
                                                                     tctGGCCAAATTTTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATCAAGGGTGGCAAAAAAT‑AAAAAACCACATTTTTAGTGGTAGTTTGCGGCGGTG‑AATTT‑TTCCACACAAATAAAAAAACT‑GGAGTTGCCATGG‑TGAGAGAAAGTAATAAGC‑ACCAGGCAGTAA‑ATAATTAGACAGAGATTG‑G‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCtgatg                                                                                                                                                                            <  1:742396/239‑1 (MQ=255)
                                                                         gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTT‑TTTCATACAAAAAAAAAAAAT‑GGAGGTTGCATGAGTGGAGGAAAAGAAAAAAA‑AAAAAACA‑AGA‑AAAAAATGATAGAGATTG‑T‑AGCT‑AACTTTACCCCCCTG‑CTTTTTACCCGAATAGCTGATGACgt                                                                                                                                                                        >  2:1794315/1‑239 (MQ=255)
                                                                         gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAACAAAAACT‑CGGGTTGTCATGA‑TGAGCGAAAGGAAAAAAC‑AAAAGGCAAAGA‑AAAAATTGACAGAGATTG‑T‑GGCT‑AACTTTACCCCCATG‑ATTTTTACCCCAATGCCCGATGACgt                                                                                                                                                                        >  1:720629/1‑239 (MQ=255)
                                                                         gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATT‑TTTCAGACAAAAACAAAAAAA‑GGAGGTGCCCTGA‑TGGGCGAAAGTAATAAAC‑AAAAAGCAGTGA‑AAAAATTGACAGAGATTG‑T‑CGCT‑AACTTTACCCCCCTG‑Att                                                                                                                                                                                               >  1:1443873/1‑216 (MQ=255)
                                                                          cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAATACAAAAAAT‑GGAGGTGGCCTGA‑GGAGGGAAAGGAATAAGC‑AAAAAGGAGGGG‑ATAAGTTGACACAGATTT‑TGCGC‑‑AACTTTTCCCCCCTGTTTTTTTACCCCAAAGCCT‑ATGACgtg                                                                                                                                                                       >  1:884123/1‑239 (MQ=255)
                                                                           gcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGGGGTATTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCAAAAGTAAAAAGC‑AACAGGCGGGAA‑AAAAGTGGACAGAGATTG‑T‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACgtg                                                                                                                                                                       <  1:261700/238‑1 (MQ=255)
                                                                             aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCt                                                                                                                                                                                            <  1:90242/215‑1 (MQ=255)
                                                                               tatTCATTTTTATTTTCGATTTGATTCCCAAACTTTTAATTACATATGCAGGGTGAAAAAAAAT‑AAAAAACCAAATTTTTAGTGTTAGTTGGGGGCGGTG‑AATTT‑TTCCAGAAAAAAAAAAAAACT‑GGAGTGGCCAGAA‑TGGGAAAAAGAAAAAAGC‑ACAAGGAAGTAA‑ATAATTGAACAGAGTTTG‑C‑CGTT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                  <  2:114036/239‑1 (MQ=255)
                                                                               tatTCATTCTTATTTTCGCGTTGATTCACGAATTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCAATGA‑TGAGCGAAAGTAAAAAGC‑AACAGGCAGTAA‑ATAAGTTGACAGAGATTG‑T‑CGTT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                  <  1:85661/239‑1 (MQ=255)
                                                                               tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                  <  1:1794315/239‑1 (MQ=255)
                                                                               tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGG‑GAATT‑TTTCAGACAAAAACAAAAAAA‑GGAGGTGTCATGT‑TGAGAGAAAATAAAAAAA‑AAAAAACAGAGA‑ATAAAATGAAAGAGATAG‑T‑GGCC‑AACATTACCACCACG‑ATTTCTACCCGAATGCCTGATAAGGTGGGGGa                                                                                                                                                                  >  2:708509/1‑239 (MQ=255)
                                                                                         tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGAAAAATAAAAAAAAA‑GGAGTTGGCATGA‑TGAGGGAAAGTAAAAAAC‑AAAAAGAAGAGA‑AAAAATTGACAGAGATTG‑T‑CGCTAAACTTTA‑CGCCATG‑ATTTTTACCCGAAAGCCTCATGAAGTGGGGGATAaaaaaaaa                                                                                                                                                        >  1:1456224/1‑239 (MQ=255)
                                                                                         tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAAACAAAAAAAAAAAAT‑GGAGTTGGCCTGA‑TGAGCGGAAGGAATAAAA‑AAAAAGCAAAGA‑AAAAATTGACAGAGATTG‑T‑CGCT‑AACTTTACCACCATG‑ATTTTTACCCGAATGCCCGATGACGGGGGGGGTTAAATaaaa                                                                                                                                                        >  1:744373/1‑239 (MQ=255)
                                                                                         tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATAAAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                        <  1:708509/239‑1 (MQ=255)
                                                                                         tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAAT‑AAAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTG‑AATTT‑TTCAAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                        <  1:1065028/239‑1 (MQ=255)
                                                                                          aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAACAAAAAAT‑GGGGTTTGCATGA‑TGTGGGAAAGTAAAAAGA‑AAAAGGCAGTGA‑ATAAATTGACAGAGAATG‑T‑TGCT‑AACTTTTACGCCATG‑ATTTTTACCCCAATTCCtgatg                                                                                                                                                                            >  1:1476876/1‑218 (MQ=255)
                                                                                                    taaTTCACGAACTGTTATTTACATATTCACGGTGGAAAAAAAT‑ATAAAACCAATTTTTAAGTGGTGGTTTGTGGCGTTG‑ATTTT‑TACCAGCCAAATACAAAACCG‑GTATTTGCCATGA‑TGAGCAAAATAAAAAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGTT‑ATCTTTTCCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAgg                                                                                                                                             <  1:226313/236‑1 (MQ=255)
                                                                                                                  ttaattaaATATTCAGGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTG‑AATTT‑TTCCAAACAAATAAAAAAACG‑GGAGTTGCCATGT‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGTT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCtgatg                                                                                                                                                                            <  1:376381/194‑1 (MQ=255)
                                                                                                                  ttAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCCGACAAAAACAAAAAAT‑GGGGTTGGCATGA‑TGAGCGGAAGTAATAAAC‑AAAAAGCAGTGA‑ATAAGTTGACAGAGAATG‑T‑CGCT‑AAATTTACCCCCATG‑ATTTTTACCCGAATGCCTGATGAAGTGGTGGGtaaaataaaa                                                                                                                                                        >  1:443298/1‑214 (MQ=255)
                                                                                                                  ttAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGAt                                                                                                                                                                                                                            <  1:670032/150‑1 (MQ=255)
                                                                                                                  ttAATTACATATTCACGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTGGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAGGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCtgatg                                                                                                                                                                            <  1:889832/194‑1 (MQ=255)
                                                                                                                          atatTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGG‑AAATT‑TTTTAAAAAAAAAAAAAAAAA‑GGAGGTGGCATGG‑GGAGGGAAAATAAAAAACAAAAAGACAAGAA‑AAAAGTT‑AAAGAGAATGTT‑GGCT‑AA‑ATTAACGCCCAG‑ATTTTTATCCTAAAACCTGATTACGGGGTGGTAAAAATAAAAAAACTAAAAGGATGCGGAAAAGGC‑TCGATgggg                                                                                                                      >  2:1688847/1‑239 (MQ=255)
                                                                                                                          atatTCACGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTGGTTTGGGGCGGTG‑AATTT‑TTCCAGAAAAATACAAAAACT‑GGATTTGCCATGA‑TGAGCAAAAGAAAAAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATGG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAAt                                                                                                                                                                                    <  1:31142/178‑1 (MQ=255)
                                                                                                                           tatTTAGGGTGAAAAAAAAT‑AAAAACCCACATTTTTAGTGGTGTTTTGTGGCGGTA‑AATTT‑TTCCAAAAAAAAAAAAAAACT‑GTGTTTCCGTTGA‑TGGGCAAAATAAATAACC‑AACGTGCAGTAA‑ATAGTTTAACAGATTTTG‑C‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                     <  2:1722856/239‑1 (MQ=255)
                                                                                                                           tatTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATACAAAAACG‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑ACCTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                     <  1:905265/239‑1 (MQ=255)
                                                                                                                           tatTCACGGTGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTA‑AATTT‑TTCCAGACAAATAAAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                     <  1:1214955/239‑1 (MQ=255)
                                                                                                                            atTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑GATTT‑TTTCCAACAAATACAAAAACT‑GGGGTTGCCCTGA‑TGAGCGGAAGGAATAAAC‑AAAAAGCAGTGA‑ATAAAATGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCCTG‑ATTTTTACCCCAATGCCTGTTGACGGGGGGGGTAAAATAAAAAAAAT‑AAAAGAAGCCGAAACATCGTCGGTGGGGaa                                                                                                                    >  1:1632709/1‑239 (MQ=255)
                                                                                                                            atTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAATACAAAAAAT‑GGAGTTGCCATGA‑TGAGGGGAAGGAAAAAAC‑AACAAGCAGGGA‑AAAAAGTGACAGAGATTG‑T‑TGCT‑AAATTTAACCCCCTG‑ATTTTTTCCCCAAAGGCTGATGACGGGGGGGGTAAACTAAAAAAACT‑AAAAGAAGCCCAAAAGGCGTCGAGGGGGaa                                                                                                                    >  1:1379428/1‑239 (MQ=255)
                                                                                                                            atTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATT‑TTTCCGACAAATAACAAAAAT‑GGGGTTTCCATGA‑TGAGCGGAAGAAATAAGC‑AACAGGCAGAGA‑ATAAATTGACAGAGATTG‑T‑CGCT‑AACTTTTCCGCCACG‑ATTTTTACCCCAAAACCGGATGACGGGGGGGGTAAACTAAAAAAACT‑AAAGGATTCCGAAACGTCGGCGGTGGGGaa                                                                                                                    >  1:1442619/1‑239 (MQ=255)
                                                                                                                                gtataaaagaaaaaa‑aaaaaaCCTCATTTTTAGGGGTGTTTTGTGGCGGTA‑AATTT‑TTCCAAAAAAAAACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCGGTAA‑ATAAGTTAAAAGAGTTTG‑T‑CGTT‑ATTTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                                                <  2:878920/230‑1 (MQ=255)
                                                                                                                                aCGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                                                                <  1:1218097/239‑1 (MQ=255)
                                                                                                                                  ggTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATAT‑TTTTAAACAAAAAAAAAAAAT‑GGAGTTGGCATGA‑TTGACGGAAATAAAAAAA‑AAAAAGAAGTGA‑ATAAAATGAAAGAGAATG‑T‑TGAT‑TAATTTAACACCCAG‑ATTTCTAACCCAATACCTGATGACGGGGTGGGTTACATAAAAAATCT‑AAAAGAAGCTAAAACATTGTTGATGGGGGAAATTAt                                                                                                              >  2:809249/1‑239 (MQ=255)
                                                                                                                                   gTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTTCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                              <  1:1688847/238‑1 (MQ=255)
                                                                                                                                   gTGGAAAAAAAA‑AAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAAAACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                                              <  1:520009/238‑1 (MQ=255)
                                                                                                                                    tGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AAATT‑TTTTAAAAAAAAAAAAAAAAA‑GGAGGTGGCCTGA‑TGGGCTGAAATAATAAAA‑AAAAAAAAACGG‑ATAAGATTAAAGAGAATG‑T‑TGCT‑AAATTTATCGCCATG‑ATTTTTTACCCAATGCCTGATGAGGGGGGGGATAAACAAAAAAAACT‑AAAGGATGCCGAAAACGCGTCGACGGTGGAaataattt                                                                                                            >  2:1214955/1‑237 (MQ=255)
                                                                                                                                    tGGAAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATAAAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGA‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                     <  1:1726654/230‑1 (MQ=255)
                                                                                                                                        aaaaaaTAAAAAAACAAAATTTTTAGGGGTGTTTGGTGGCGGGA‑AATTT‑TCCCAGAAAAAAACAAAAACA‑GGGGTTGCAATGA‑TGGGAGAAATAAATAACC‑AACGGGTAGTGA‑ATAAGTGGACAGATATTG‑T‑GGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTAcc                                                                                                         <  2:653129/239‑1 (MQ=255)
                                                                                                                                          aaaaa‑aTAAAACAACATTTTTATTGATGGTTGGTGGCGGTG‑AATTT‑TCCCGGAAAAAAACAAAACTG‑GGAGTGGCTATGT‑GGAGAGAAACAAAAAGAA‑AAAAGGCAGTAA‑AAAAGTTGAAAGAGATTG‑T‑CTCT‑ACTTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa                                                                                                      <  1:126358/239‑1 (MQ=255)
                                                                                                                                                    gaaagcaTTTTTAGGGGTAGTTTGGGGGGGTA‑AATTT‑TTCCAAACAAATAAAAAAACG‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGA‑AACAGGCAGTAA‑ATAATTTGACAGAGATTG‑T‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGtt                                                                                               <  1:565783/232‑1 (MQ=255)
                                                                                                                                                        cattttttATTGGTAGTTTG‑GGGGGTGTAATTT‑TTCCAAACAAATAAAAAAATT‑GAGGTTGCGATGA‑TGAGCGAAATTAACACTA‑GACCGCTCGTCA‑ATAGGGTCAGAGGTGTTT‑T‑CGAG‑ACATGTTCCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAACCAGCT‑AAAGGATGCCGAAACGTCGGCGATGGGGAAAATTATATGCCATGCGATGTTCGccaa                                                                                         <  2:181245/236‑1 (MQ=255)
                                                                                                                                                        acaTTTTTGGTGGTAGTTGGGGGCGGAG‑AATTT‑TTCAAGAAAAATACAAAAACT‑GGAGTGGCCATGA‑GGAGGGAAAGTAATAACC‑AACGGGCAGTGA‑ATAATTAAAAAGAGATTG‑A‑CGTT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                                                         <  2:1197928/239‑1 (MQ=255)
                                                                                                                                                         caTTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTTCAGACAAAAAAAAAAAAT‑GGAGTTGCCATGA‑TGAGCGGAAAGAATAAAC‑AACAAGCAGGGA‑AAAAAATGACAGAGATTG‑T‑CGCT‑AACATTACCGCCCTG‑ATTTTTACCCCAATACCTGATTAAGTGGTGGATAAACTAAAAAAACT‑AAAAGATGCCGAAACGTCGTCGATGGGGGAAATTATCTACCaaa                                                                                                      >  1:878920/1‑223 (MQ=255)
                                                                                                                                                          aTTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATAAAAAAACT‑GGAGTTGCCATGA‑GGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                                     <  1:526289/209‑1 (MQ=255)
                                                                                                                                                              ttAGTGGTAGTTTGTGGCGGTA‑AATTT‑TCCCAAAAAAATACAAAAACT‑GGATTCGCCAGGA‑TGAGAAAAAGTAAAAAGC‑AACGGGCGGGAA‑AAAAGTGGAAAGAGATTG‑T‑CGCA‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCa                                                                                   <  1:993382/239‑1 (MQ=255)
                                                                                                                                                                      ggTTTGTGCAGGGA‑AATTT‑TTACAAACAAATA‑AAAAACTGGGTGTTGCAAGAG‑TGAGCGAAGATAAAAAGC‑ACCGGGAAGTGA‑ATAACTTGACAGAGATTG‑T‑CGCT‑AATTTTCCCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                           <  2:1419820/238‑1 (MQ=255)
                                                                                                                                                                      aGTTTGGGGGGGTG‑AATTT‑TTCCAAAAAAAAACAAAAACT‑GGAGTTGCCAATA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTAA‑ATAAGTTGACAGAGTTTG‑T‑CGTT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                           <  2:744373/239‑1 (MQ=255)
                                                                                                                                                                       gTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                        <  1:637382/162‑1 (MQ=255)
                                                                                                                                                                       gTTTGTGGCGGTG‑AATTT‑TTCCAGAAAAATAAAAAAACT‑GGAGTGGCCATGA‑TGAGGGAAAGTAAAAAGC‑AAAAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                           <  1:1547930/238‑1 (MQ=255)
                                                                                                                                                                       atttGTTGGGGTT‑AATTTATTCAAAAAAAATACAAAAACG‑GGAGTCGCGATGA‑TGAGCAAAAATAATAGGC‑AGCAGACAGTAA‑ATAGGTGGAAGTTAATTG‑T‑CTCT‑AACGTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                           <  2:884123/238‑1 (MQ=255)
                                                                                                                                                                                ggTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGa                                                                  <  1:1729096/238‑1 (MQ=255)
                                                                                                                                                                                    aaaTTT‑TTCCAAAAAAATAAAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGA‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCg                                                              <  1:467363/238‑1 (MQ=255)
                                                                                                                                                                                         t‑ttCCAGAAAAATAAAAAAACT‑GGAGTTGCCATGA‑TGGGCGAAAGTAAAAAGC‑AACAGGCAGTAA‑ATAAGTTGACAGAGTTTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                                         <  1:540667/239‑1 (MQ=255)
                                                                                                                                                                                          gtacgagcaaaaGACAAAAACG‑GGAGGTGCGAAAA‑TGAGCGAAAGTAAAAACG‑AAGAGGCA‑TGATATTAGTTGACAGAGATTG‑G‑CAAT‑ATCATTACCGCCATG‑ATTTCTGCCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCACACGATGTTGGAGAACAAGCAAAAAGCGATTGACCCGAATCGTcctg                                                         <  2:543538/230‑1 (MQ=255)
                                                                                                                                                                                            tcaaGAAAAATAAAAAAACT‑GGAGTTGCCATGA‑TGAGCAAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcc                                                       <  1:850556/236‑1 (MQ=255)
                                                                                                                                                                                                     aTACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGac                                              >  2:1326305/1‑239 (MQ=255)
                                                                                                                                                                                                     aTACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGac                                              >  1:1722573/1‑239 (MQ=255)
                                                                                                                                                                                                      taaaaaaaCT‑GGAGTGCCCGTGA‑TGGGCAAAACAAAAAAGC‑AAGAGGCAGTGA‑AAATGTTGACAGAATTTG‑G‑CTCT‑ACTTTGGCCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGaca                                             <  1:1514889/236‑1 (MQ=255)
                                                                                                                                                                                                         aaaaaCT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCg                                          <  1:226879/239‑1 (MQ=255)
                                                                                                                                                                                                           aaaCT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCggg                                        >  1:1004015/1‑239 (MQ=255)
                                                                                                                                                                                                            aagcgggAGTTGCCATGT‑TGAAGAAAAGGAATAAGC‑AACAGGCAGTGA‑ATAAGTTAGAAGAGTTTT‑C‑GGCT‑AACTTAGCCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCggg                                        <  2:1632709/234‑1 (MQ=255)
                                                                                                                                                                                                            aaCT‑GGAGTTGCCAGGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTAA‑ATAAGTTGAAAGAGATTG‑T‑CGTT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                       <  1:1768294/239‑1 (MQ=255)
                                                                                                                                                                                                            aaCT‑GGAGTTGCAATGA‑TGAACGAAATAAAAAAGA‑AACAGGCAGTGA‑AAAAGTTGACAGGGTTTG‑T‑CGTT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                       <  1:1041458/239‑1 (MQ=255)
                                                                                                                                                                                                                       gCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGa                                               >  1:1607696/1‑221 (MQ=255)
                                                                                                                                                                                                                       gCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGtt                             >  1:216602/1‑239 (MQ=255)
                                                                                                                                                                                                                       gCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt                              >  2:287048/1‑238 (MQ=255)
                                                                                                                                                                                                                             a‑tgaGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGt                       >  2:27965/1‑239 (MQ=255)
                                                                                                                                                                                                                                   cGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAAc                                                                                                                                   >  1:1755260/1‑126 (MQ=255)
                                                                                                                                                                                                                                   cGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACGGGGGAGATTATGTTCTTCGTTAAAg                  >  2:536103/1‑239 (MQ=255)
                                                                                                                                                                                                                                       aGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCgg              >  1:910559/1‑239 (MQ=255)
                                                                                                                                                                                                                                          aaaaaGC‑AACAGGCAGTAA‑ATAGGTTGACAGCGATTG‑C‑CGTT‑AATTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTc           <  1:979585/236‑1 (MQ=255)
                                                                                                                                                                                                                                             aaGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCg        <  1:27965/239‑1 (MQ=255)
                                                                                                                                                                                                                                             aaGC‑AACAGGCAGTGA‑ATAAGTTGAAAGAAATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCg        <  1:809249/239‑1 (MQ=255)
                                                                                                                                                                                                                                                   aCAGGCAGTAA‑ATAAGTTGACAGAGATTG‑T‑CGAT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTcc   <  1:1365548/239‑1 (MQ=255)
                                                                                                                                                                                                                                                    cAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCa                                                                                                        >  1:393066/1‑137 (MQ=255)
                                                                                                                                                                                                                                                    cAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTccc  >  2:222092/1‑239 (MQ=255)
                                                                                                                                                                                                                                                    cAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTccc  >  1:255310/1‑239 (MQ=255)
                                                                                                                                                                                                                                                    cAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTccc  >  1:51681/1‑239 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                    
TTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAAT‑ATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTG‑AATTT‑TTCCAGACAAATACAAAAACT‑GGAGTTGCCATGA‑TGAGCGAAAGTAATAAGC‑AACAGGCAGTGA‑ATAAGTTGACAGAGATTG‑T‑CGCT‑AACTTTACCGCCATG‑ATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCT‑AAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCC  >  NC_007779/3204905‑3205381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑