BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,764,882	A→C	6.5%	H32Q (CAT→CAG)	Y75_RS18670 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,764,882	0	A	C	6.5%	935.9 / 12.4	310	H32Q (CAT→CAG)	Y75_RS18670	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (143/145); new base C (2/20); total (145/165)
Fisher's exact test for biased strand distribution p-value = 2.05e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 312 total aligned reads displayed.

TTTCCCCGCATTTAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTAAATTGTAG  >  NC_007779/3764651‑3765120

 ttCCCCGCATTTAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAAc                                                                                                                                                                                                                                        <  1:818265/239‑1 (MQ=255)

   acccGCGTGTAAAACAAATCTTTCGTCATCGGCAACCTGAATATGGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCTGCGATTCCCCTACAATAACATAGCCGTTTGTTCCATTACTATCTTTTTCCTTCGATAGCCCATTGATGGTGTCTGACTGCTATTGATACTTTCCTGAGCTACCCTTGGCGGTATGGGAAACCa                                                                                                                                                                                                                                      <  2:1571799/238‑1 (MQ=255)

       gCATTTAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGc                                                                                                                                                                                                                                  <  2:628408/239‑1 (MQ=255)

       gCATTTAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGGTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCGGAACTACCCTTTGCGGTATGGGAAACCAGAGc                                                                                                                                                                                                                                  <  2:1455064/239‑1 (MQ=255)

                 cAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATa                                                                                                                                                                                                                        <  1:1387404/239‑1 (MQ=255)

                   aaTCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGc                                                                                                                                                                                                                                  >  1:406458/1‑227 (MQ=255)

                    aTCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACa                                                                                                                                                                                                                      >  1:1667401/1‑238 (MQ=255)

                                       cTGAATATTGGGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATa                                                                                                                                                                                                                        <  1:741580/217‑1 (MQ=255)

                                        tGAATATTGTGCCGGTTAAGTGCTGGATCATTGATCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTTCGATTGATACTTTCCTGAACTGCCCTTTGCTGTAAGGGAGACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAg                                                                                                                                                                                                 <  1:267786/239‑1 (MQ=255)

                                         gAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGt                                                                                                                                                                                                <  1:1503024/239‑1 (MQ=255)

                                                 tgCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCATTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATaa                                                                                                                                                                                        >  2:830642/1‑239 (MQ=255)

                                                  gCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTTCCCTTTGCGGTATGGGAAACCAGAGCATAc                                                                                                                                                                                                                              <  1:1002646/200‑1 (MQ=255)

                                                    cGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGt                                                                                                                                                                                                >  2:1600419/1‑228 (MQ=255)

                                                    cGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGt                                                                                                                                                                                                <  1:1600419/228‑1 (MQ=255)

                                                      gTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                   >  1:543819/1‑239 (MQ=255)

                                                       ttAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTATCTTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                   <  1:910540/238‑1 (MQ=255)

                                                       ttAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                   <  1:1424279/238‑1 (MQ=255)

                                                                      ttGAGCATCTTAACGATGTCATCGGAACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTCCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                   <  2:1059179/223‑1 (MQ=255)

                                                                        gAGCGTCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTTCTTTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCt                                                                                                                                                                 <  1:801010/239‑1 (MQ=255)

                                                                         aGCATCCTAACGATGTCATCAGCACCATCAGTGACAAGGAAAACCAGCAATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACTATATACAGCCTGCAAGCATCAGCTCCAGTGGGAATAAACCGGCAGCCTTAACAAAGCCCtt                                                                                                                                                                >  2:1311961/1‑239 (MQ=255)

                                                                           cATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTaa                                                                                                                                                              >  1:77904/1‑239 (MQ=255)

                                                                            aTCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTa                                                                                                                                                               <  1:498059/237‑1 (MQ=255)

                                                                              cTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATAc                                                                                                                                                                                                                              <  1:63645/172‑1 (MQ=255)

                                                                              cTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACATCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAAt                                                                                                                                                           >  2:1167832/1‑239 (MQ=255)

                                                                                tAACGATGTCATCGGCACCATCAGTGATAAGGTAACCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTc                                                                                                                                                         >  2:320510/1‑239 (MQ=255)

                                                                                      tGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTc                                                                                                                                                   >  1:161193/1‑239 (MQ=255)

                                                                                        tCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACtt                                                                                                                                                    <  1:391872/236‑1 (MQ=255)

                                                                                           tCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCTGTGGGAATAAACCGGCAGACTTAAAAAATACCTTAAAATTCAACTTCATGAt                                                                                                                                              >  1:241000/1‑239 (MQ=255)

                                                                                             ggCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACTCTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTa                                                                                                                                            <  1:214055/239‑1 (MQ=255)

                                                                                               cACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCGTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTTTGTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTaa                                                                                                                                           <  1:1703568/238‑1 (MQ=255)

                                                                                                    tCAGTGCTAAGGTAATTCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGACACTTTCCTGAACTA‑CCTTTGCGGTCTGGCAAACCAGAGCATAAGAGATACAGCCTGAAAGCATCAGCGCCAGCGGGACTAAACCAGAAGCCTTAAAAAATCCCTTAAAATTCAACTGCAGGATTAATCCTTTa                                                                                                                                    >  2:416771/1‑239 (MQ=255)

                                                                                                    tCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTaa                                                                                                                                           <  1:1195936/233‑1 (MQ=255)

                                                                                                    tCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCttt                                                                                                                                     >  1:599726/1‑239 (MQ=255)

                                                                                                           tcaGGTAATCCAGCGATTCCCCTGCAAAACCATAGACTTTTGTACCATTACTATCTTTTGCCTGCGATAGCCCATTGATGGTGTCTGACTGAGATTGATCCTTTCCTGAACTCCCCTTTGTGGTAAGGCAAACCACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGa                                                                                                                               <  1:1349606/236‑1 (MQ=255)

                                                                                                            aaGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTAATATCTTTTGCCTGCGATAGACAAGTGATGGTGTCTGAATGCGATTGATACTTTCCTGAATTACCCTTTGCGGTATGGGAAACCAGAGCATAATAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAATTACATTAAAATTCAACTTAATTATTAATCATTTAAACGAGt                                                                                                                             >  2:1432532/1‑239 (MQ=255)

                                                                                                              ggTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTa                                                                                                                            >  1:19800/1‑238 (MQ=255)

                                                                                                               gTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACAGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTACTCCTTTAAACGAGTa                                                                                                                            >  2:588025/1‑237 (MQ=255)

                                                                                                                 aaTCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCt                                                                                                                         <  2:77904/238‑1 (MQ=255)

                                                                                                                  aTCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACg                                                                                                                                >  1:998984/1‑230 (MQ=255)

                                                                                                                   tCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTTAACTACTCTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAg                                                                                                                      <  1:1831569/239‑1 (MQ=255)

                                                                                                                   tCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTTCCTTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAg                                                                                                                      <  1:659807/239‑1 (MQ=255)

                                                                                                                         gATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAg                                                                                                                              <  2:202518/225‑1 (MQ=255)

                                                                                                                                cTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTAAGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCAt                                                                                                         <  1:582953/239‑1 (MQ=255)

                                                                                                                                    aaaaaCATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATActc                                                                                                     <  2:731078/239‑1 (MQ=255)

                                                                                                                                        aCATAGCCTTTTGTTCCATTGCTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTAAGGGAGACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTaa                                                                                                                                           <  1:717918/197‑1 (MQ=255)

                                                                                                                                          aTAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCttt                                                                                               <  2:1751869/239‑1 (MQ=255)

                                                                                                                                          aTAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCttt                                                                                               <  2:19800/239‑1 (MQ=255)

                                                                                                                                          aTAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTAAGGGAGACGAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCttt                                                                                               <  1:1657881/239‑1 (MQ=255)

                                                                                                                                            aGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAAACAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTcc                                                                                             <  1:1722632/239‑1 (MQ=255)

                                                                                                                                              ccTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTccc                                                                                            >  1:1302892/1‑238 (MQ=255)

                                                                                                                                               cTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCcctc                                                                                          <  1:320510/239‑1 (MQ=255)

                                                                                                                                                        cATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTGCCCTTTGCGGTAAGGCAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAgc                                                                                 <  1:205723/239‑1 (MQ=255)

                                                                                                                                                         atttctacgtttgGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTAATACGTTCCTTATCTACCGTATGCGGTATGGGAAACCAGAGAATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCTGCAGCCTTAAACAATCCCGTAAAATTCAACTACATGATTAAGCATTTAAACGAGTATCTGAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTTgcg                                                                                <  2:1245867/230‑1 (MQ=255)

                                                                                                                                                         aTTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTc                                                                                                                                                         >  1:1473135/1‑166 (MQ=255)

                                                                                                                                                         aTTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAgcg                                                                                <  2:233708/239‑1 (MQ=255)

                                                                                                                                                             cTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACTAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTg                                                                            >  1:341494/1‑239 (MQ=255)

                                                                                                                                                              tATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGa                                                                           <  2:50208/239‑1 (MQ=255)

                                                                                                                                                               aTCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGaaa                                                                                                             >  1:519872/1‑204 (MQ=255)

                                                                                                                                                               aTCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGat                                                                          >  2:264425/1‑239 (MQ=255)

                                                                                                                                                                tCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTAAAGGAGACGAGGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                   <  1:1448041/133‑1 (MQ=255)

                                                                                                                                                                tCTTTTGCCTGCGATAGCCCAGTGATGCCGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGAGGTAAGGGAAACCAGAGCATACGAGATACATCCTGAAAGCATCAGCGCCAGTGGGAATaaa                                                                                                                                                                                       >  2:454230/1‑129 (MQ=255)

                                                                                                                                                                   tttGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTc                                                                                                                                                   <  2:1093529/162‑1 (MQ=255)

                                                                                                                                                                     tGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGCTACTTTCCTGAACTACCCTTTGCGGTATGGGAAACAAGAGCATACGAGATACAGCCTGACAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGACATTCAAAGCATAATCTTCATACACTTCTGTTTAGCGCTTGATATccat                                                                    >  2:1828282/1‑237 (MQ=255)

                                                                                                                                                                     tGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                   <  1:1161237/128‑1 (MQ=255)

                                                                                                                                                                     tGCCTGCGAGAGCCCAGTGATGGTGTCTGACTGAGATTGATACTTTCCTGAACTACACTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGAGCGAATAAACCGGCAGCCTTCAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAACCTAGTAGCTAAGCCGCTGAAACCATATTCTTATTTCCCTCCTTTTTAGCACATGATATCCCt                                                                    >  2:517057/1‑239 (MQ=255)

                                                                                                                                                                       ccTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCt                                                                                                                         <  2:1676341/184‑1 (MQ=255)

                                                                                                                                                                         tGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCa                                                                                                                                                                                                                                      >  1:975335/1‑73 (MQ=255)

                                                                                                                                                                         tGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCa                                                                                                                                                                                                                                      <  2:975335/73‑1 (MQ=255)

                                                                                                                                                                          gCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCa                                                               <  2:166355/239‑1 (MQ=255)

                                                                                                                                                                          gCGATAGACCAGTGATGGTGTCTGACTCCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCATTGGGACTAAACCGGCAGCCTTAAAAACTCCCTTAAACTTCAACTTCATGATTAATCCTTTAAACACGTTGCTAAGCCGTTGAAACCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCACttttac                                                               >  2:1357031/1‑237 (MQ=255)

                                                                                                                                                                                      tGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTaaaaaa                                                                                                                                                                      <  2:293506/124‑1 (MQ=255)

                                                                                                                                                                                      tGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTaaaaaa                                                                                                                                                                      >  1:293506/1‑124 (MQ=255)

                                                                                                                                                                                      tGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCACACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTACAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCt                                                                                                                         >  2:1476283/1‑169 (MQ=255)

                                                                                                                                                                                      tGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCATTTGCGGTATGGGAACCCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGACAAAACCGGCAGCCTTAAAACATCCATGAAAATTCAACTTCATGATTAATCCTTTAAACGCGTCGCTAAGCCGTTGACAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCACTATTCAGATTTcacccc                                                    >  2:1646516/1‑233 (MQ=255)

                                                                                                                                                                                           gtgtCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGCTACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                   >  1:1145356/1‑106 (MQ=255)

                                                                                                                                                                                           gtgtCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                   <  2:1145356/106‑1 (MQ=255)

                                                                                                                                                                                           gtgtCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCTTACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCa                                              >  1:1331953/1‑239 (MQ=255)

                                                                                                                                                                                                  aCTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCt                                                                                                                         <  2:1190067/157‑1 (MQ=255)

                                                                                                                                                                                                  aCTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAgc                                                                                 >  2:485955/1‑197 (MQ=255)

                                                                                                                                                                                                      atactGATACTTTCCTAAACTGTCCCTTGCGGTAGGGAAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGGGCAAGTGTGAATAAACCGTCCGCACTAAAAAATCACTTAAAATTCAACTTGATGATTAATCCTTTAAACGAGTAGCTAAGCCGTAGAAAGCATACTCTTCTTTCCTCCCTGTTAAGCGACTGATCTCCCTTTTCAGATATCTGCCCGACGCATGTCAtttttt                                   >  2:933280/5‑239 (MQ=255)

                                                                                                                                                                                                       gATTGATACTTTCCTGAACTACCCTTTGCGGTATg                                                                                                                                                                                                                                              <  1:1015551/35‑1 (MQ=255)

                                                                                                                                                                                                       gATTGATACTTTCCTGAACTACCCTTTGCGGTAAGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCAttttttt                                  <  1:1480930/239‑1 (MQ=255)

                                                                                                                                                                                                             tACTTTCCTGAACTTCCCTTTGCGGTATGGGAAAACAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCAt                            <  1:1026358/239‑1 (MQ=255)

                                                                                                                                                                                                             tACTTTCCTGAACTACCCTTTGCGGTAAAGCAGAACACAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCAt                            <  1:1078179/239‑1 (MQ=255)

                                                                                                                                                                                                             accTTTCTTGAACTACCCGTCGAGTTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGAGCATAAACCGTCAGCCTTAAAAAATCCCTTACAATTCAACATCATGATTAATCCTTTCAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGCCGCATGTCATTTTTTTATGCAt                            <  2:659169/237‑1 (MQ=255)

                                                                                                                                                                                                                 ttCCTGAACTACCCTTTGCGGTATGGGCAACCaga                                                                                                                                                                                                                                    >  2:1015551/1‑35 (MQ=255)

                                                                                                                                                                                                                  tCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGcc                                                     <  1:253426/209‑1 (MQ=255)

                                                                                                                                                                                                                  tCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCAt                            <  1:847119/234‑1 (MQ=255)

                                                                                                                                                                                                                       aaCTACCCTTTGCCGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCCTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACACATGTCATTTTTTTATGCATTGTTCttttt                  <  2:543819/239‑1 (MQ=255)

                                                                                                                                                                                                                        aCTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCttttt                  <  2:605392/238‑1 (MQ=255)

                                                                                                                                                                                                                        aCTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTtg                 <  2:395322/239‑1 (MQ=255)

                                                                                                                                                                                                                          tACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGATTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTtgtg               <  2:138962/239‑1 (MQ=255)

                                                                                                                                                                                                                            cccTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTATCTCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGa              >  1:9648/1‑238 (MQ=255)

                                                                                                                                                                                                                            cccTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCTCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGa              >  1:470718/1‑238 (MQ=255)

                                                                                                                                                                                                                            cccTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCACTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGAt             <  1:982105/239‑1 (MQ=255)

                                                                                                                                                                                                                               gtcgCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAACCGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTGTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTGCTTTTTGTGATCTa          <  2:1622309/236‑1 (MQ=255)

                                                                                                                                                                                                                                  gCGGTATGGGAAACCAGAACATACGAGATACAGCCTGAAAGCATCAGCGACAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTAAAt       <  2:310733/239‑1 (MQ=255)

                                                                                                                                                                                                                                      tATGGGCAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAACAACCCGGCAGCCTTACAAAATCCCTTAAAATTCCACTTCATGATTAATCCTTTTAACGCGTAGCTAAGCCGTTGACATCATACTTTTCCTTCCCTCCTGTTTAGCGCCTGATTTTCCTTTTCAGATTTCTGCCCGACGCACGTCCTTTTTTTATGCATTGTTCTTTTTGTGCTCTACATTgca   >  1:480828/1‑237 (MQ=255)

                                                                                                                                                                                                                                      tATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCttttt                  <  1:1096159/224‑1 (MQ=255)

                                                                                                                                                                                                                                      tATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTAAATTgta   >  1:431142/1‑239 (MQ=255)

TTTCCCCGCATTTAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTAAATTGTAG  >  NC_007779/3764651‑3765120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`