BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,764,886	G→C	8.7%	S31C (TCC→TGC)	Y75_RS18670 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,764,886	0	G	C	8.7%	965.9 / 35.4	311	S31C (TCC→TGC)	Y75_RS18670	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (142/138); new base C (2/26); total (146/165)
Fisher's exact test for biased strand distribution p-value = 4.09e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 322 total aligned reads displayed.

TTTCCCCGCATTTAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTAAATTGTAGTACA  >  NC_007779/3764651‑3765124

tttCCCCGCATTTAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGaa                                                                                                                                                                                                                                              >  1:131196/1‑238 (MQ=255)

 ttCCCCGCATTTAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAAc                                                                                                                                                                                                                                            <  1:818265/239‑1 (MQ=255)

       gCATTTAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGc                                                                                                                                                                                                                                      <  2:628408/239‑1 (MQ=255)

           ttAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATAc                                                                                                                                                                                                                                  <  1:995614/239‑1 (MQ=255)

                 cAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATa                                                                                                                                                                                                                            <  1:575948/239‑1 (MQ=255)

                   aaTCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGc                                                                                                                                                                                                                                      <  2:406458/227‑1 (MQ=255)

                         gCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGa                                                                                                                                                                                                                    >  1:231457/1‑239 (MQ=255)

                           gTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGTTAAGGGAGACGAGGGCATACGAGATACAGCCTGaa                                                                                                                                                                                                                   <  1:845297/238‑1 (MQ=255)

                                              ttGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAATCATAGCCTTTTGTTCCATTACTATCTTTTTCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTGCCTGAACTACCCTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGaa                                                                                                                                                                                               <  1:67533/239‑1 (MQ=255)

                                                 tgCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATaa                                                                                                                                                                                            >  1:1751869/1‑239 (MQ=255)

                                                  gCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTTCCCTTTGCGGTATGGGAAACCAGAGCATAc                                                                                                                                                                                                                                  <  1:1002646/200‑1 (MQ=255)

                                                    cGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGt                                                                                                                                                                                                    <  1:1600419/228‑1 (MQ=255)

                                                      gTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCg                                                                                                                                                                                        >  1:166355/1‑238 (MQ=255)

                                                       ttAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                       <  1:1424279/238‑1 (MQ=255)

                                                                ggATCATTGAGCATCGTAACGAAGTCATAGCCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAAAATAGCCTATTGATCCATTACTATCTTTAGCCTGCGATAACCCAGTGTTGGTGTCTGACTGCGATTTTTACATTCCTGAACTACCCTTTTCGGTCTGTGTTACCATATTATACGAGATACAGCGTGAATGCATCAGCCCCAGTGGCAATAAAGCGAGAGCCTTaaa                                                                                                                                                                             >  2:1608913/1‑239 (MQ=255)

                                                                ggATCAATGAGAATCTGAACGAAGTCATCGGCACCATGAGTGAGAAGGTAATCCAGCGATTCACCAACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTTCGATAGCACAGTGTTGGTGTCTGACTGCGATTGATCCTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGATCATACGAGATACAGACTGAAAGCATGAGGGACAGAGGGCATAAACGGGTAGCCTTgaa                                                                                                                                                                             >  2:423409/1‑239 (MQ=255)

                                                                      ttGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                       >  1:1059179/1‑223 (MQ=255)

                                                                      ttGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATc                                                                                                                                                                        >  1:1086090/1‑238 (MQ=255)

                                                                      ttGAGCATCTTAACGATGTCATCGGAACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTCCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                       <  2:1059179/223‑1 (MQ=255)

                                                                        gAGCGTCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTTCTTTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCt                                                                                                                                                                     <  1:801010/239‑1 (MQ=255)

                                                                           cATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTaa                                                                                                                                                                  >  1:77904/1‑239 (MQ=255)

                                                                            aTCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGTGGTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTa                                                                                                                                                                   <  1:625027/237‑1 (MQ=255)

                                                                             tCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAACCTTTTGTTCCATTACTATCGTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGACACCAGAGCATACGAGATACAGCCTGTAAGCATCAGCGCCAGTGGGAATAAACCGACAGCATTAAAAAACCTCTTaa                                                                                                                                                                  >  2:1220620/1‑237 (MQ=255)

                                                                               ttAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTTCTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTTTTTTCAAGCAGAAGACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAAtt                                                                                                                                                              <  1:937267/239‑1 (MQ=255)

                                                                                tAACGCTGTAATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTCCTATCTTTTGCCTGCGATAGCGCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTTCTTTTTTTTGTAAAGGAGAAGAGGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTc                                                                                                                                                             <  1:1711181/239‑1 (MQ=255)

                                                                                tAACGATGTCATCGGCACCATCAGTGATAAGGTAACCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTc                                                                                                                                                             >  2:320510/1‑239 (MQ=255)

                                                                                      tGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTc                                                                                                                                                       >  1:161193/1‑239 (MQ=255)

                                                                                        tCATCGGCACCATCAGTGATAAGGCAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACtt                                                                                                                                                        >  2:391872/1‑236 (MQ=255)

                                                                                           tCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCTGTGGGAATAAACCGGCAGACTTAAAAAATACCTTAAAATTCAACTTCATGAt                                                                                                                                                  >  1:241000/1‑239 (MQ=255)

                                                                                             ggCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTAAGGGAGACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTa                                                                                                                                                <  1:327876/239‑1 (MQ=255)

                                                                                               cACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTaa                                                                                                                                               <  1:403678/238‑1 (MQ=255)

                                                                                                  cATCAGTGATAAGGTAATCCAGCGATTCACCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACTGACAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCt                                                                                                                                           >  2:1322962/1‑239 (MQ=255)

                                                                                                    tCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCttt                                                                                                                                         >  2:1679158/1‑239 (MQ=255)

                                                                                                         gATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACg                                                                                                                                    <  2:58984/239‑1 (MQ=255)

                                                                                                              ggTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTCCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCATTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTa                                                                                                                                >  1:191713/1‑238 (MQ=255)

                                                                                                                 aaTCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGTTCTGGGAAAACACGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCt                                                                                                                             <  1:1391245/238‑1 (MQ=255)

                                                                                                                  aTCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGc                                                                                                                                                                                                                                      >  1:1538868/1‑132 (MQ=255)

                                                                                                                  aTCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATAc                                                                                                                                                                                                                                  >  1:37347/1‑136 (MQ=255)

                                                                                                                  aTCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTaa                                                                                                                           >  1:1131884/1‑239 (MQ=255)

                                                                                                                  aTCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTaa                                                                                                                           >  1:731078/1‑239 (MQ=255)

                                                                                                                  aTCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTaa                                                                                                                           >  1:200627/1‑239 (MQ=255)

                                                                                                                   tCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTAGCCTTTGTTTTAAAGGAGACCACAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAg                                                                                                                          <  1:304624/239‑1 (MQ=255)

                                                                                                                        cGATTCACCTACAAAAACAGAGCCTTGTGGTACACTACTATCTTTTACATTAGATAACCAAGTGATGGTGTCTGACTGAGATGTATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATAAAACATACAGACTGAATGCATCAGCGTCAGTGGGAATAAACCGATAGCCTTACAAAATCACTTACACTTCAACTACATGATTAACTATTTAAACGAATAGCTAAACTGtt                                                                                                                     >  2:1285517/1‑239 (MQ=255)

                                                                                                                         gATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTg                                                                                                                    >  1:1352215/1‑239 (MQ=255)

                                                                                                                               ccTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCa                                                                                                              <  1:28293/239‑1 (MQ=255)

                                                                                                                                cTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTA‑CCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATa                                                                                                            <  1:416771/239‑1 (MQ=255)

                                                                                                                                    aaaaaCATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATActc                                                                                                         <  2:731078/239‑1 (MQ=255)

                                                                                                                                          aTAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCttt                                                                                                   <  2:19800/239‑1 (MQ=255)

                                                                                                                                          aTAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCttt                                                                                                   <  2:1751869/239‑1 (MQ=255)

                                                                                                                                                      tCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAg                                                                                                                                                                                                     <  1:454230/129‑1 (MQ=255)

                                                                                                                                                         aTTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAgcg                                                                                    <  2:233708/239‑1 (MQ=255)

                                                                                                                                                          ttACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAgcg                                                                                    >  2:289274/1‑238 (MQ=255)

                                                                                                                                                           tACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCa                                                                                                                                                                                                                                          >  1:971679/1‑87 (MQ=255)

                                                                                                                                                              tATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGa                                                                               <  2:1131884/239‑1 (MQ=255)

                                                                                                                                                              tATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGa                                                                               <  2:50208/239‑1 (MQ=255)

                                                                                                                                                              tATCTTTTGCCGGCGATAGCCCAGTGATGGTGGCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGa                                                                               <  2:1466377/239‑1 (MQ=255)

                                                                                                                                                                tCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTAAAGGAGACGAGGGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCgg                                                                                                                                                                                       <  1:1448041/133‑1 (MQ=255)

                                                                                                                                                                  ttttGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATa                                                                                                            >  1:1483116/1‑206 (MQ=255)

                                                                                                                                                                  ttttGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATa                                                                                                            <  2:1483116/206‑1 (MQ=255)

                                                                                                                                                                   tttGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTc                                                                                                                                                       <  2:1093529/162‑1 (MQ=255)

                                                                                                                                                                    ttGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCa                                                                                                              >  1:598330/1‑202 (MQ=255)

                                                                                                                                                                     tGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGCTACTTTCCTGAACTACCCTTTGCGGTATGGGAAACAAGAGCATACGAGATACAGCCTGACAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGACATTCAAAGCATAATCTTCATACACTTCTGTTTAGCGCTTGATATccat                                                                        >  2:1828282/1‑237 (MQ=255)

                                                                                                                                                                     tGCCTGCGAGAGCCCAGTGATGGTGTCTGACTGAGATTGATACTTTCCTGAACTACACTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGAGCGAATAAACCGGCAGCCTTCAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAACCTAGTAGCTAAGCCGCTGAAACCATATTCTTATTTCCCTCCTTTTTAGCACATGATATCCCt                                                                        >  2:517057/1‑239 (MQ=255)

                                                                                                                                                                         tGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCa                                                                                                                                                                                                                                          <  2:975335/73‑1 (MQ=255)

                                                                                                                                                                          gCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAAc                                                                                                                                                                                                                                            >  2:1424921/1‑70 (MQ=255)

                                                                                                                                                                          gCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTcc                                                                                                 <  2:1151186/209‑1 (MQ=255)

                                                                                                                                                                          gCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCa                                                                   >  2:1371601/1‑239 (MQ=255)

                                                                                                                                                                                      tGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCt                                                                                                                             <  1:1476283/169‑1 (MQ=255)

                                                                                                                                                                                      tGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAg                                                                                      >  2:1450136/1‑208 (MQ=255)

                                                                                                                                                                                      tGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCATTTGCGGTATGGGAACCCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGACAAAACCGGCAGCCTTAAAACATCCATGAAAATTCAACTTCATGATTAATCCTTTAAACGCGTCGCTAAGCCGTTGACAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCACTATTCAGATTTcacccc                                                        >  2:1646516/1‑233 (MQ=255)

                                                                                                                                                                                        aTGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTACACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGTTATCCCTTTTAAGATTTCTGCCCGa                                                      >  2:1578756/1‑238 (MQ=255)

                                                                                                                                                                                           gtgtCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCTTACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCa                                                  >  1:1331953/1‑239 (MQ=255)

                                                                                                                                                                                            tgtCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGata                                                                             <  2:780572/211‑1 (MQ=255)

                                                                                                                                                                                                tGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTAAGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTaa                                                                                                                                               <  1:511284/141‑1 (MQ=255)

                                                                                                                                                                                                  aCTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAgc                                                                                     >  2:485955/1‑197 (MQ=255)

                                                                                                                                                                                                  aCTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAgc                                                                                     <  1:485955/197‑1 (MQ=255)

                                                                                                                                                                                                  aCTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGAGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCt                                                                                                                             >  1:1190067/1‑157 (MQ=255)

                                                                                                                                                                                                      cGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTTTTCTTTCCCTCCTGTTTAGTGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCAtttttt                                       >  1:890324/1‑239 (MQ=255)

                                                                                                                                                                                                        aTTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTa                                     >  1:21156/1‑239 (MQ=255)

                                                                                                                                                                                                           gATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGc                                  <  1:264425/239‑1 (MQ=255)

                                                                                                                                                                                                             tACTTTCCTGAACTACCCTTTGCGGTATGGGAGACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCAt                                <  1:1667680/239‑1 (MQ=255)

                                                                                                                                                                                                             tACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCAt                                <  1:64655/239‑1 (MQ=255)

                                                                                                                                                                                                             accTTTCTTGAACTACCCGTCGAGTTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGAGCATAAACCGTCAGCCTTAAAAAATCCCTTACAATTCAACATCATGATTAATCCTTTCAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGCCGCATGTCATTTTTTTATGCAt                                <  2:659169/237‑1 (MQ=255)

                                                                                                                                                                                                                 ttCCTGAACTACCCTTTGCGGTATGGGCAACCaga                                                                                                                                                                                                                                        >  2:1015551/1‑35 (MQ=255)

                                                                                                                                                                                                                  tCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGcc                                                         >  2:253426/1‑209 (MQ=255)

                                                                                                                                                                                                                  tCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGt                             >  1:1153974/1‑237 (MQ=255)

                                                                                                                                                                                                                      gAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCtttt                       >  1:533321/1‑239 (MQ=255)

                                                                                                                                                                                                                       aaCTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCttttt                      >  2:1178395/1‑239 (MQ=255)

                                                                                                                                                                                                                       aaCTACCCTTTGCCGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCCTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACACATGTCATTTTTTTATGCATTGTTCttttt                      <  2:543819/239‑1 (MQ=255)

                                                                                                                                                                                                                        aCTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCttttt                      <  2:605392/238‑1 (MQ=255)

                                                                                                                                                                                                                            cccTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGCAAGCATCAGCGCCACTGGGTATAAACCGGCAGCCATAAAAAATCCCTTAAAATTCAACTTCATGATTAACCCTTTAAATGCGTCGCTAAGCCCTTTTACGCATACTCTTCTTTCCCTCCTGTTTATCTCCTGATTTCTCTTTTCAGATTTCTGCCCGACGAATGTCATTTTTTTATGCATTGTTCTTTTTGTGa                  >  1:471887/1‑238 (MQ=255)

                                                                                                                                                                                                                            cccTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCt                                                                        >  2:1665416/1‑184 (MQ=255)

                                                                                                                                                                                                                            cccTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACCCATGTTCTTTTTTTATGCATTGTTCTTTTtgcttt                 >  2:847119/1‑235 (MQ=255)

                                                                                                                                                                                                                               gtcgCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAACCGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTGTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTGCTTTTTGTGATCTa              <  2:1622309/236‑1 (MQ=255)

                                                                                                                                                                                                                                 tGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGCTTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTaaa            >  1:1022016/1‑239 (MQ=255)

                                                                                                                                                                                                                                  gCGGTATGGGAAACCAGAACATACGAGATACAGCCTGAAAGCATCAGCGACAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTAAAt           <  2:310733/239‑1 (MQ=255)

                                                                                                                                                                                                                                      tATGGTAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGTGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCCCCTGTTTAGCGCCTGATATCCCTTTTCAGAttt                                                              <  1:981450/184‑1 (MQ=255)

                                                                                                                                                                                                                                       aTGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTAAATTgtag      <  2:9648/239‑1 (MQ=255)

                                                                                                                                                                                                                                           gAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTAAATTGTAGTac   <  1:1243902/238‑1 (MQ=255)

                                                                                                                                                                                                                                           gAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTAAATTGTAGTac   <  2:21156/238‑1 (MQ=255)

TTTCCCCGCATTTAAAACAAATCTTGCGTCATCGGCAACCTGAATATTGTGCCGGTTAAGTGCTGGATCATTGAGCATCTTAACGATGTCATCGGCACCATCAGTGATAAGGTAATCCAGCGATTCCCCTACAAAAACATAGCCTTTTGTTCCATTACTATCTTTTGCCTGCGATAGCCCAGTGATGGTGTCTGACTGCGATTGATACTTTCCTGAACTACCCTTTGCGGTATGGGAAACCAGAGCATACGAGATACAGCCTGAAAGCATCAGCGCCAGTGGGAATAAACCGGCAGCCTTAAAAAATCCCTTAAAATTCAACTTCATGATTAATCCTTTAAACGAGTAGCTAAGCCGTTGAAAGCATACTCTTCTTTCCCTCCTGTTTAGCGCCTGATATCCCTTTTCAGATTTCTGCCCGACGCATGTCATTTTTTTATGCATTGTTCTTTTTGTGATCTAAATTGTAGTACA  >  NC_007779/3764651‑3765124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`