Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,777,745 A→T 29.3% I312F (ATT→TTT)  Y75_RS18735 → PTS transporter subunit EIIC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077793,777,7450AT29.3% 88.9 / 25.6 102I312F (ATT→TTT) Y75_RS18735PTS transporter subunit EIIC
Reads supporting (aligned to +/- strand):  ref base A (25/36);  new base T (13/10);  total (52/50)
Fisher's exact test for biased strand distribution p-value = 2.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01

Only 100 of 104 total aligned reads displayed.

CCACTTCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAT  >  NC_007779/3777507‑3777980
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                       
ccacTTCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑Ga                                                                                                                                                                                                                                                         <  1:824146/239‑1 (MQ=255)
 cattgcATCTGCGGAGAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGTGCGCAGCATCTGCAAGAGTTCAGTTTGGGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GAt                                                                                                                                                                                                                                                        <  2:163010/234‑1 (MQ=255)
   cTTCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTTC‑T‑GGttt                                                                                                                                                                                                                                                      >  1:610594/1‑238 (MQ=255)
   cTTCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTTC‑T‑GAtt                                                                                                                                                                                                                                                       >  1:136336/1‑238 (MQ=255)
   cTTCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GGtt                                                                                                                                                                                                                                                       >  1:1136140/1‑238 (MQ=255)
   cTTCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGC‑T‑GGtt                                                                                                                                                                                                                                                       >  1:545420/1‑238 (MQ=255)
    ttCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑GAttt                                                                                                                                                                                                                                                      >  1:1543897/1‑237 (MQ=255)
    ttCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GGTT‑c                                                                                                                                                                                                                                                     >  1:1503656/1‑238 (MQ=255)
    ttCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CATGC‑T‑GTTT‑c                                                                                                                                                                                                                                                     >  1:391063/1‑238 (MQ=255)
      cATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCg                                                                                                                                                                                                                                                  <  1:10971/239‑1 (MQ=255)
           aCGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CATGC‑T‑TTTT‑ACCG‑CAAcc                                                                                                                                                                                                                                            >  1:1076440/1‑239 (MQ=255)
                 aGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCTTTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGCTT‑GATT‑CCCC‑CACCC‑taccc                                                                                                                                                                                                                                      >  2:288960/1‑235 (MQ=255)
                   tttATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGCAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAACAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CCTCC‑T‑CTTT‑TCCC‑CCACC‑A‑T‑AA‑ccc                                                                                                                                                                                                                                 >  1:836824/1‑237 (MQ=255)
                   tttATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GTTT‑CCCg                                                                                                                                                                                                                                                  >  1:1821347/1‑226 (MQ=255)
                   tttATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCg                                                                                                                                                                                                                                                  <  2:1821347/226‑1 (MQ=255)
                           tGGCCCGGCAGCTGTGAAGGGCGGCTTTCAGATGTCCGGGGCGCAGCATCTGAAAGAGTTAAGTTTGAGCGCCGAGCCGCTAAAATCGTTGTTCCCGGAAGGCGTTTTTGCCC‑TGCACGGTAACTAAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑Ctgg                                                                                                                                                                                                                      <  1:760360/239‑1 (MQ=255)
                             gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑GATT‑CCCC‑CCACC‑T‑T‑AA‑CCGCCAT‑G‑Ctggtg                                                                                                                                                                                                                    >  1:411160/1‑239 (MQ=255)
                             gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTC‑T‑GATT‑CCCC‑CCACC‑C‑T‑TA‑Ccccccacacgggg                                                                                                                                                                                                                      >  1:1475809/1‑230 (MQ=255)
                             gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑TCCC‑CCCCC‑C‑T‑AA‑ACGCCCT‑G‑Ctgggg                                                                                                                                                                                                                    >  1:1399069/1‑237 (MQ=255)
                             gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCG‑CCACC‑T‑T‑AA‑ACCCCCC‑G‑Ctgggg                                                                                                                                                                                                                    >  1:1319888/1‑237 (MQ=255)
                             gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CCTGT‑T‑GATT‑TCCG‑CAACC‑C‑T‑AA‑CCGCCCT‑G‑Ctggtg                                                                                                                                                                                                                    >  1:85941/1‑239 (MQ=255)
                             gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CCTGC‑TCGTTT‑CCCC‑CACCC‑T‑C‑AA‑CC‑CCAT‑T‑Ctgggg                                                                                                                                                                                                                    >  1:1409023/1‑237 (MQ=255)
                                          tGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑GAGT‑CCCG‑CACCC‑C‑T‑AA‑CCCCCCA‑G‑CTgggggggggtatcgcac                                                                                                                                                                                                       >  2:430904/1‑228 (MQ=255)
                                                 ggcATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑GGTT‑TCCG‑CAAAC‑T‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGAATACCGAAC‑CG‑CCggg                                                                                                                                                                                              >  1:176832/1‑238 (MQ=255)
                                                 ggcATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GTTT‑CCCC‑CCCCC‑T‑T‑AA‑CCGCCCT‑G‑CTGGTGGGGAGTACCGAAC‑CG‑CTggg                                                                                                                                                                                              >  1:1731551/1‑238 (MQ=255)
                                                 ggcATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAAATATCGAAA‑CG‑CTggt                                                                                                                                                                                              >  1:200520/1‑238 (MQ=255)
                                                        aGATGTCCGGGGCGCAGCATCTGAAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTAAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑c                                                                                                                                                                                                  <  1:1546703/228‑1 (MQ=255)
                                                        aGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑GATT‑CCCC‑CCACC‑T‑T‑AA‑CCCCCAC‑G‑CCTGGGGGGATTATCGCAA‑CC‑CTCGAATTTAc                                                                                                                                                                                        >  1:395469/1‑238 (MQ=255)
                                                             tACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑AGTGC‑G‑GAAT‑CCCC‑CCACC‑C‑C‑AA‑CCCGCATCG‑CTGG‑GGGAATTACCGAAC‑CA‑CTTCGATTTtccttcct                                                                                                                                                                                  >  1:1798591/1‑239 (MQ=255)
                                                               cTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GGTT‑ACCG‑CAACC‑C‑T‑AA‑ACGCCCT‑G‑CTGGGGGGGATTAACGAAC‑CG‑CTGGAAGTTTTCTTCCTGt                                                                                                                                                                                >  1:505681/1‑239 (MQ=255)
                                                                tGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTTC‑T‑GGTT‑TCCG‑CCACC‑C‑T‑TA‑CCGCCCC‑G‑CTGGGGGGGATTACCGGAC‑CC‑CCGGGATTTTACTTCCTGtt                                                                                                                                                                               >  1:583632/1‑239 (MQ=255)
                                                                  ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTC‑T‑GGTT‑CCCG‑CCCCC‑C‑T‑AA‑ACGCCCC‑GCCTGGGGGGAA‑TACCGAAC‑CGCCGGGAATTTACCtctctcttt                                                                                                                                                                              >  2:1546703/1‑231 (MQ=255)
                                                                  ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GGTT‑TCCC‑CAACC‑T‑T‑TA‑CCCCCCT‑G‑CCGGTGGGGATTACCGAAA‑CC‑CTTGAATTTACCTTCCTTTTCa                                                                                                                                                                             >  1:1620298/1‑239 (MQ=255)
                                                                  ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑TCCC‑CCACC‑C‑T‑AA‑ACCCCAC‑G‑CTGGGGGGGATTATCGAAC‑CC‑CCGGGATTTTACTTCCCGtttt                                                                                                                                                                             >  1:117082/1‑237 (MQ=255)
                                                                  ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGA‑T‑GTTT‑TCCA‑CAACC‑T‑T‑TA‑ACGCCCC‑G‑CTGGGGGGGATTAACGAAC‑CG‑CTGGGAATTACCTTTCtttt                                                                                                                                                                               >  1:1606354/1‑237 (MQ=255)
                                                                  ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGC‑T‑GATT‑CCCC‑CCACC‑T‑T‑AA‑CCCCCAC‑G‑CTGGTGGGGATTACCGAAC‑CC‑CCGGGATTTTTCTTCCTGttta                                                                                                                                                                             >  1:1559578/1‑237 (MQ=255)
                                                                  ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGC‑G‑GTTT‑TCCG‑CCACC‑T‑A‑CA‑ACGCCCT‑T‑CTGGTGGGGAATACGGAACACC‑CGGGAGTTTACTTTctctgca                                                                                                                                                                              >  2:1641070/1‑233 (MQ=255)
                                                                  ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGC‑CTTGT‑T‑GATT‑TCCC‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGGGGGGATTACCGAAC‑CG‑CTGGGATTTACCTTCCTGTTCa                                                                                                                                                                             >  1:323525/1‑239 (MQ=255)
                                                                    ggcagcaTCTGCAAGAGTTCATTTGGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCAt                                                                                                                                                                            <  1:678105/237‑1 (MQ=255)
                                                                    cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑GTTT‑TCCC‑CCACC‑T‑T‑AA‑CCGCCAC‑G‑CTGGGGGGGATTACCGAAA‑CG‑CTGGGAATTATCTTCCTGTTCAtt                                                                                                                                                                           >  1:953174/1‑239 (MQ=255)
                                                                    cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTC‑T‑GCTT‑CCCG‑CCACC‑C‑T‑AA‑CCCCCCT‑G‑CTGGGGGGGATTACCGAAC‑CG‑CCGGAATTTTTCTTCCTTTTCAtt                                                                                                                                                                           >  1:1704723/1‑239 (MQ=255)
                                                                    cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGG‑T‑GTTT‑TCCC‑CCACC‑C‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGATTACCCAAC‑CG‑CCGGGATTTACCTTCCTGTTCCtt                                                                                                                                                                           >  1:546418/1‑239 (MQ=255)
                                                                    cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GTTT‑CCCG‑CACCC‑T‑T‑AA‑CCCCCCT‑G‑CTGGTGGGGATTACCCCAC‑CG‑CTGGGATTTTCCTCTCTCTTCAtt                                                                                                                                                                           >  1:1532861/1‑239 (MQ=255)
                                                                       agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GGTGT‑T‑GGTT‑TCCC‑CCACC‑C‑T‑AA‑CCGCCCC‑G‑CTGGGGGGGGATAACGAAA‑CC‑CCGGGATTTACCTTTCTTGTCAtttt                                                                                                                                                                         >  1:1494959/1‑237 (MQ=255)
                                                                       agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GCTGC‑T‑GGTT‑TCCGCCCACC‑T‑A‑AA‑CC‑CCCT‑C‑CCGGGGGGGATTACCGAAC‑CC‑CCCGAATTTTACTTCCCTTTCATTTc                                                                                                                                                                         >  1:285751/1‑238 (MQ=255)
                                                                       agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCC‑CCACC‑C‑T‑AA‑CCCCCCC‑G‑CTGGGGGGGATTACCGAAC‑CG‑CTGGGAATTACCTTCCTGTTCttttt                                                                                                                                                                         >  1:1158579/1‑237 (MQ=255)
                                                                       agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGC‑T‑GATT‑TCCC‑CAACC‑T‑T‑AA‑CCGCCCC‑G‑CCGGGGGGGATTACCGAAC‑CG‑CTGGGATTTTCCTTCCTGTTCTTTTc                                                                                                                                                                         >  1:1341698/1‑238 (MQ=255)
                                                                            cTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGC‑T‑TTTT‑CCCC‑CACCC‑TCA‑AA‑CCCCCAG‑C‑GGGGGGGGGAGTACTGAAC‑CC‑CGGCAATTTCTCTT‑CTGTTCAtttgtcccct                                                                                                                                                                   >  2:1835251/1‑232 (MQ=255)
                                                                                       cAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATATACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑‑GCGGG‑CTTGC‑T‑GATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGt                                                                                                                                                      >  1:528846/1‑239 (MQ=255)
                                                                                                       ccagtGAATTCTTTGTTCCGGGACGGCGTTTTTGCCC‑GCCGCGTTAACTAAAAAT‑TTTTGGGGGCCGTGGTATTTTTTTTGGGGTTTTCCTCCACTGCCGCACGGAAAAC‑TGGGG‑AAAAG‑GG‑GGGGGG‑TTTGC‑T‑TTTC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTggc                                                                                                                                      <  2:1543897/235‑1 (MQ=255)
                                                                                                                tctttgttCCGGGGGGGCGTTTTTCCCC‑TGCGCGTAAACAAAAAAT‑TTGTGGGTGCTGTGGGTTTTTGTTTGGCATTGTCTTTCCCCCCCCCCCCGAAAAA‑GGGGG‑TAAAG‑GG‑GGGGGT‑TTTGT‑T‑GTTC‑CCCC‑CAACT‑T‑C‑CG‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAAt                                                                                                                             <  2:1158579/236‑1 (MQ=255)
                                                                                                                   ttttccccGGAGGGCGGTTTTGCCC‑TGCACGGTAACTAAAAAA‑TTTTTGGTGCGGGGGGCTTTTTTTTAGCGATGTACTTCCCTGCCGCACCGAAAAA‑TCGGG‑TAAAA‑GT‑GGGGGG‑TTTGC‑T‑GATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGt                                                                                                                           <  1:430904/233‑1 (MQ=255)
                                                                                                                     tttCCCGGAGGGGGTTTTTCCCC‑TGCAGGGTACCACAAAAT‑TCTTGGGTGCGGGGGGCTTTTTTTTAGCGATATACTTCCCTGCCGCCCCGAAAAT‑TGGGG‑TAAAG‑GG‑GGCGGT‑CTTGC‑T‑GATT‑CCCG‑AACCC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGa                                                                                                                        <  1:1106571/238‑1 (MQ=255)
                                                                                                                      tccccGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCTTTTCTTTAGCGATGTCCTTCCCTGCCGCCCCGGAAAA‑TCGGG‑TAAAA‑GG‑GGCGGG‑CTTGG‑T‑GATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑g                                                                                                                                                                                                                           <  1:86427/142‑1 (MQ=255)
                                                                                                                          cGGAGGGCGGTTTTCCCC‑TGCACGTTAACTAAAAAT‑TCTTGGGGGCGGGGGGCTTTTCTTTAGGGTTGTACTTCCCTGCCGCACCGAAAAA‑TCGGG‑AAAAG‑GG‑GGGGGG‑CTTGC‑T‑GATC‑CCCG‑CAACC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTa                                                                                                                   <  1:603958/239‑1 (MQ=255)
                                                                                                                           gggggggggTTTTGCCCATGCCGGATAACCAAAAAA‑TTTTGGGGGCGGGGGGTTTTTTTTTGGGGATTTCCTCCACTGCCGC‑CCCGAAAA‑ACGGG‑AAAAA‑GG‑GGGGGG‑GTTGC‑T‑TATT‑CCCC‑GAACCTT‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTa                                                                                                                   <  2:695002/232‑1 (MQ=255)
                                                                                                                                gggtttttGCCC‑TGCACGGTAACTAAAAAA‑TTTTTGGTGCGGGGGGCTTTTTTTTGGCGATGTACTTCACTGCCGCCCGGAAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑TTTGC‑T‑GATC‑CCCG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTa                                                                                                              <  1:1273821/234‑1 (MQ=255)
                                                                                                                                gggtttttCCCC‑TGCAGGGTAACTAAAAAA‑TTTTGGGTGCGGGGGTTTTTTTTTTAGCGATTTACTTCCCGGCCGCACCGAAAAA‑TGGGG‑TAAAG‑GG‑GGCGGG‑TTTGC‑T‑GATC‑CCCG‑CAACT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTa                                                                                                              <  1:1557079/234‑1 (MQ=255)
                                                                                                                                gCGTTTTTGCCC‑TGCACGGTACCTAAAAAA‑TTTTGGGTGCGGTGGGTTTTTCTTTAGCGATTTACTTCCCTGCCGCCCCGAAAAA‑TGGGG‑AAAAA‑GT‑GGGGGG‑TTTGC‑T‑AATC‑CCCG‑‑AACC‑T‑T‑AACCCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTa                                                                                                              <  1:44378/238‑1 (MQ=255)
                                                                                                                                 gtgttgtcccc‑TGCAGATTATCTAAAATA‑TTTGTGGTGCGGTGGTTTTTTTTTGGGCGTGGTATTTCCCGGCCGCACCGAAAAA‑TC‑GG‑TAAAA‑GG‑GGGGGGTTTTGC‑T‑G‑TT‑CCCG‑CCACC‑T‑TCAC‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTCCCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTAt                                                                                                             <  2:546418/230‑1 (MQ=255)
                                                                                                                                   tttttCCCC‑TGCACGGTAACTAAAAAT‑TTTTTGGTGCCGTGGGCTTTTTTTTAGCGATGTACTCCCCTGCCGCCCCGGAAAA‑TCGGG‑AAAAA‑GG‑GGCGGG‑TTTGC‑T‑GATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTAtct                                                                                                           <  1:1235655/237‑1 (MQ=255)
                                                                                                                                   gTTTTGCCC‑TGCCCGGCACATAAAAAA‑TCTGGGGGGCGGGGGTCATTTTTTTGGGTTTGTTCTTCCCCGCCCCACCGCAAAA‑TGGGA‑AAAAG‑GG‑GGCGGG‑CTGGC‑T‑CTTC‑CCCA‑CAATT‑T‑T‑CA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTAtct                                                                                                           <  2:1832634/238‑1 (MQ=255)
                                                                                                                                         ccc‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCTTTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGGGGG‑CTTGC‑T‑GATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTa                                                                                                                                                                                         <  1:1039007/156‑1 (MQ=255)
                                                                                                                                            ccgCACGTGAAGTCAAAAAGTTTTTGGGCCCGTGGGTTTTTTTTTGGCGTTGAACTTCACCGCC‑CAACGGAAAA‑AGGGGATAAGA‑GG‑GGGGGG‑TTTGC‑T‑GCTC‑CCCG‑AAACT‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTtggtg                                                                                                   <  2:1319888/237‑1 (MQ=255)
                                                                                                                                             tGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTC‑T‑GATT‑CCCC‑CCACC‑T‑T‑AA‑CCCCCCT‑G‑CTGGTGGGGATTACCGAAC‑CC‑CCGGGATTTTCCTTCCTGtttttttta                                                                                                                                                                        >  1:572918/1‑163 (MQ=255)
                                                                                                                                                    tAACTAAAAAT‑TTTTTGGTGCCGTGGGTTTTTTTTTGGCGTTTTACTCCCCTGCCGC‑CCGGAAAAGTCGGG‑‑AAAA‑GTGGGGGGG‑TTTGC‑T‑TATC‑CCCG‑CACCT‑T‑A‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGc                                                                                           <  1:416031/238‑1 (MQ=255)
                                                                                                                                                            aaa‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑TATT‑CCCC‑CCACC‑C‑T‑TA‑CCCCCCT‑G‑CCGGTGGGGATTAACGCAC‑CC‑CCGGAATTTATCTTCCTCTTCATTTTTCCGTTGCCGTTTTTGGGTGCAC‑CCGCGCCTGGGGCCCCCACTGTCGCCGGTATTTTATCCCTTTGTTGTGTTGGGCAACAgggc                                                                                   >  2:1383918/1‑238 (MQ=255)
                                                                                                                                                              attttttGGCGCCGTGGGCTTTTTTTTAGCGATGTCCTCCCCTCCCGCCCCGAAAAA‑TGGGG‑AAAAA‑GG‑GGCGGT‑CTTGC‑T‑GATC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCg                                                                                 <  1:151393/235‑1 (MQ=255)
                                                                                                                                                                tCTTGGGTGCCGTGGGCATTTCTTTAGCGATGTCCTTCCCCGCCGCCCCGGAAAA‑TCGGG‑AAAAG‑GG‑GGGGGG‑CTGGC‑T‑GATC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑c                                                                                                                                                                                                  <  1:866634/126‑1 (MQ=255)
                                                                                                                                                                 tttgggcgCCGGGGGTTTTTTTTGAGCTGTGTATTCCACGGCCGCACCGGAAAA‑TGGGG‑AAAAA‑GT‑GGGGGG‑TTTGC‑T‑GTTC‑CCCG‑CAACT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAg                                                                              <  1:514912/232‑1 (MQ=255)
                                                                                                                                                                      gTGCCGGGGGCTTTTTTTTGGCGATGTCTTTCCCTGCCGCCCCGGAAAA‑GCGGG‑TAAGG‑GG‑GGGGGG‑TTTGC‑T‑GTTT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCt                                                                          <  2:176832/238‑1 (MQ=255)
                                                                                                                                                                        gcggTGGGTTTTTTTTTAGCGATTTTTTCCACTCCCGCCCGGAAAAA‑TGGGG‑AAAAG‑GG‑GGGGGG‑TTTGC‑T‑GATC‑CCCG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGa                                                                        <  1:172106/235‑1 (MQ=255)
                                                                                                                                                                          cGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑TCCC‑CCACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGGATTACCGAAC‑CC‑CCGGAATTTTCCTTCCTGTTCATTTTACCGTTGCTG‑TTTTCGGTACACGCCGTG‑CTGGCGGCCTCCATGTCGACCGTAATGTATTTCTTTTGTGTGGTGGGGAAAATGGGCGGAGGGCTGATTg                                                                     >  1:637932/1‑239 (MQ=255)
                                                                                                                                                                            tGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGATTACCGAAC‑CG‑CTGGGATTTACCTTCCTGTTCATTTCACCCTTTCTG‑TTTTCGGTACACGCCCTG‑CTGGCGGCCTCAATGTCGACCCTAATGTATCTCTTTTGTGTGGGGGGGGACATGGGCGGGGGGCTGATTg                                                                     >  1:97250/1‑237 (MQ=255)
                                                                                                                                                                                   ttttttGGCGATGTACTCCACTGCGCCCCCGAAAAA‑TCGGG‑AAAAG‑GG‑GGGGGG‑TTTGC‑T‑GATC‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGttt                                                            <  1:1383918/236‑1 (MQ=255)
                                                                                                                                                                                      tttAGCGATGTACTTCCCTGCCGCACCGGAAAA‑TGGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATC‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTg                                                                                                                                                                                 <  1:1342616/121‑1 (MQ=255)
                                                                                                                                                                                        tAGGGATGTTCTTCCCTGCCGCACCGAAAAA‑TCGGG‑AAAAG‑GG‑GGCGGG‑CTTGC‑T‑GATC‑CCCG‑AACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCg                                                       <  1:1835251/239‑1 (MQ=255)
                                                                                                                                                                                            gttttcttccccTGCCCCCCCGAAAAA‑TCGGT‑AAAAA‑GG‑GGCGGG‑TTTGC‑T‑‑ATT‑CCCC‑CAACCTT‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCa                                                     <  1:1207934/226‑1 (MQ=255)
                                                                                                                                                                                              tGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GGTT‑TCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGGATTACCCAAC‑CG‑CCggg                                                                                                                                                                                              >  1:58795/1‑99 (MQ=255)
                                                                                                                                                                                               gtcctccccgcccGCCCCGAAAAT‑TCGGG‑TAAAA‑GG‑GGCGGG‑‑TTGC‑C‑TATTCCCCG‑CACCC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACt                                                <  1:745572/228‑1 (MQ=255)
                                                                                                                                                                                                  ctccACTCCCGCACCGGAAAA‑CCGGT‑TAAAG‑GT‑GGCGGC‑CTTGC‑T‑GATC‑CCCC‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTCCCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGa                                             <  1:772112/236‑1 (MQ=255)
                                                                                                                                                                                                   ttCACTGCCGCCCCGAAAAA‑TGGGT‑TAAAA‑GT‑GGCGGG‑TTTGC‑T‑GATC‑CCCG‑CACCT‑T‑A‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTa                                                                                                                                                                                         <  2:1741903/100‑1 (MQ=255)
                                                                                                                                                                                                   ttCACTGCCGCACCGGAAAA‑CCGGG‑TAAAA‑GG‑GGCGGG‑TTTGC‑T‑GATC‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGa                                                                                                                                                                                              <  1:1700701/95‑1 (MQ=255)
                                                                                                                                                                                                     cACGGCCGCCCGGAAAAA‑TGGGG‑AAAAG‑GT‑GGCGGG‑CTTGC‑T‑GATC‑CCCG‑CAACT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATcc                                          <  1:222330/239‑1 (MQ=255)
                                                                                                                                                                                                        ccccGCCCCGTAAAA‑TGGGA‑AAAAG‑GG‑GGGGGG‑CTTGC‑T‑G‑TT‑CCCC‑CACCT‑T‑T‑AACCCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGa                                       <  2:637932/237‑1 (MQ=255)
                                                                                                                                                                                                         cccccagcgaaaaa‑TCGGG‑TAAAG‑TG‑GGCGGG‑TTTGC‑T‑GATT‑CCCG‑CACCC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGAt                                      <  1:1025745/229‑1 (MQ=255)
                                                                                                                                                                                                          cccccccGAAAAA‑TCGGG‑TAAAG‑GG‑GGGGGG‑TTGCC‑T‑GATT‑CCCG‑CACCC‑T‑A‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATg                                     <  1:673971/234‑1 (MQ=255)
                                                                                                                                                                                                             cACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCG‑CAACC‑C‑T‑AA‑CCGCCAT‑G‑CTGGGGGGGATTACCGAAC‑CG‑CCGGGATTTACCTTCCTTTTCATTTTACCGTTTCTT‑TTTGCGGGACACGCCCTG‑CTGGCGGcccccatt                                                                                                                            >  1:1104530/1‑143 (MQ=255)
                                                                                                                                                                                                             cACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCC‑CAACC‑T‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGATTACCGAAC‑CG‑CTGGGATTTTCCTTCCTGtt                                                                                                                                                                               >  1:1741903/1‑100 (MQ=255)
                                                                                                                                                                                                                 cgAAAA‑ATGGG‑TAAAAGGG‑GGGGGG‑TTTGT‑T‑TTTC‑CCCG‑CACCC‑T‑A‑AC‑CCGCCAG‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGc                               <  1:544876/238‑1 (MQ=255)
                                                                                                                                                                                                                   aaaa‑GCGGG‑TAAAG‑GG‑GGCGGG‑CTTGC‑T‑GTTC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAAc                            <  1:1548336/239‑1 (MQ=255)
                                                                                                                                                                                                                    aaaaggggg‑AAAAG‑GG‑GGCGGT‑TTTGC‑T‑GTTC‑CCCG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAAc                            <  1:225827/233‑1 (MQ=255)
                                                                                                                                                                                                                        tCGGG‑TAAAG‑GG‑GGGGGG‑TTTGC‑T‑G‑TT‑CCCC‑GAACC‑T‑TAAA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcg                        <  1:685951/239‑1 (MQ=255)
                                                                                                                                                                                                                        tCGGG‑TAAAG‑GG‑GGCGGG‑TTTGC‑T‑GATC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcg                        <  1:1336319/239‑1 (MQ=255)
                                                                                                                                                                                                                        atgggatAAAT‑GT‑GGCGGG‑CTTGC‑T‑GATC‑CCCC‑CCGCT‑T‑A‑AG‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAAGTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAc                         <  1:85262/233‑1 (MQ=255)
                                                                                                                                                                                                                         cGGG‑TAAAG‑GT‑GGCGGG‑CTTGC‑T‑GTTC‑CCCG‑AACCT‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCATCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcgc                       <  1:1696382/239‑1 (MQ=255)
                                                                                                                                                                                                                          ggg‑TAAAG‑GG‑GGGGGT‑TTTGC‑T‑GATC‑CCCC‑CACCC‑T‑A‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcgc                       <  1:1213019/238‑1 (MQ=255)
                                                                                                                                                                                                                                                 ttccgaaTT‑CCCG‑CATCC‑T‑T‑AA‑CCGCCTT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCa     <  1:1054896/233‑1 (MQ=255)
                                                                                                                                                                                                                                                 gC‑T‑GATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCaaa   >  2:24706/1‑239 (MQ=255)
                                                                                                                                                                                                                                                     ggATC‑CCCG‑AAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt  <  1:1641070/237‑1 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                       
CCACTTCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑GATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCGAAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAT  >  NC_007779/3777507‑3777980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑