Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,777,753 A→C 21.8% A314A (GCA→GCC)  Y75_RS18735 → PTS transporter subunit EIIC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077793,777,7530AC21.8% 162.4 / 10.1 103A314A (GCA→GCC) Y75_RS18735PTS transporter subunit EIIC
Reads supporting (aligned to +/- strand):  ref base A (25/53);  new base C (22/3);  total (47/56)
Fisher's exact test for biased strand distribution p-value = 1.15e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 106 total aligned reads displayed.

ACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGGT  >  NC_007779/3777518‑3777991
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                       
aCGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CATGC‑T‑T‑TTT‑ACCG‑CAAcc                                                                                                                                                                                                                                                      >  1:1076440/1‑239 (MQ=255)
      aGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCTTTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGCTT‑G‑ATT‑CCCC‑CACCC‑taccc                                                                                                                                                                                                                                                >  2:288960/1‑235 (MQ=255)
        tttATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGCAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAACAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CCTCC‑T‑C‑TTT‑TCCC‑CCACC‑A‑T‑AA‑ccc                                                                                                                                                                                                                                           >  1:836824/1‑237 (MQ=255)
                tGGCCCGGCAGCTGTGAAGGGCGGCTTTCAGATGTCCGGGGCGCAGCATCTGAAAGAGTTAAGTTTGAGCGCCGAGCCGCTAAAATCGTTGTTCCCGGAAGGCGTTTTTGCCC‑TGCACGGTAACTAAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑Ctgg                                                                                                                                                                                                                                <  1:760360/239‑1 (MQ=255)
                  gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑G‑ATT‑CCCC‑CCACC‑T‑T‑AA‑CCGCCAT‑G‑Ctggtg                                                                                                                                                                                                                              >  1:411160/1‑239 (MQ=255)
                  gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTC‑T‑G‑ATT‑CCCC‑CCACC‑C‑T‑TA‑Ccccccacacgggg                                                                                                                                                                                                                                >  1:1475809/1‑230 (MQ=255)
                  gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑TCCC‑CCCCC‑C‑T‑AA‑ACGCCCT‑G‑Ctgggg                                                                                                                                                                                                                              >  1:1399069/1‑237 (MQ=255)
                  gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CCACC‑T‑T‑AA‑ACCCCCC‑G‑Ctgggg                                                                                                                                                                                                                              >  1:1319888/1‑237 (MQ=255)
                  gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CCTGT‑T‑G‑ATT‑TCCG‑CAACC‑C‑T‑AA‑CCGCCCT‑G‑Ctggtg                                                                                                                                                                                                                              >  1:85941/1‑239 (MQ=255)
                  gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CCTGC‑TCG‑TTT‑CCCC‑CACCC‑T‑C‑AA‑CC‑CCAT‑T‑Ctgggg                                                                                                                                                                                                                              >  1:1409023/1‑237 (MQ=255)
                               tGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑G‑AGT‑CCCG‑CACCC‑C‑T‑AA‑CCCCCCA‑G‑CTgggggggggtatcgcac                                                                                                                                                                                                                 >  2:430904/1‑228 (MQ=255)
                                      ggcATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑G‑GTT‑TCCG‑CAAAC‑T‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGAATACCG‑AAC‑CG‑CCggg                                                                                                                                                                                                       >  1:176832/1‑238 (MQ=255)
                                      ggcATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑TTT‑CCCC‑CCCCC‑T‑T‑AA‑CCGCCCT‑G‑CTGGTGGGGAGTACCG‑AAC‑CG‑CTggg                                                                                                                                                                                                       >  1:1731551/1‑238 (MQ=255)
                                      ggcATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAAATATCG‑AAA‑CG‑CTggt                                                                                                                                                                                                       >  1:200520/1‑238 (MQ=255)
                                             aGATGTCCGGGGCGCAGCATCTGAAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTAAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑c                                                                                                                                                                                                           <  1:1546703/228‑1 (MQ=255)
                                             aGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑G‑ATT‑CCCC‑CCACC‑T‑T‑AA‑CCCCCAC‑G‑CCTGGGGGGATTATCG‑CAA‑CC‑CTCGAATTTAc                                                                                                                                                                                                 >  1:395469/1‑238 (MQ=255)
                                                  tACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑AGTGC‑G‑G‑AAT‑CCCC‑CCACC‑C‑C‑AA‑CCCGCATCG‑CTGG‑GGGAATTACCG‑AAC‑CA‑CTTCGATTTtccttcct                                                                                                                                                                                           >  1:1798591/1‑239 (MQ=255)
                                                    cTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑GTT‑ACCG‑CAACC‑C‑T‑AA‑ACGCCCT‑G‑CTGGGGGGGATTAACG‑AAC‑CG‑CTGGAAGTTTTCTTCCTGt                                                                                                                                                                                         >  1:505681/1‑239 (MQ=255)
                                                     tGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTTC‑T‑G‑GTT‑TCCG‑CCACC‑C‑T‑TA‑CCGCCCC‑G‑CTGGGGGGGATTACCG‑GAC‑CC‑CCGGGATTTTACTTCCTGtt                                                                                                                                                                                        >  1:583632/1‑239 (MQ=255)
                                                       ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTC‑T‑G‑GTT‑CCCG‑CCCCC‑C‑T‑AA‑ACGCCCC‑GCCTGGGGGGAA‑TACCG‑AAC‑CGCCGGGAATTTACCtctctcttt                                                                                                                                                                                       >  2:1546703/1‑231 (MQ=255)
                                                       ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑GTT‑TCCC‑CAACC‑T‑T‑TA‑CCCCCCT‑G‑CCGGTGGGGATTACCG‑AAA‑CC‑CTTGAATTTACCTTCCTTTTCa                                                                                                                                                                                      >  1:1620298/1‑239 (MQ=255)
                                                       ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑TCCC‑CCACC‑C‑T‑AA‑ACCCCAC‑G‑CTGGGGGGGATTATCG‑AAC‑CC‑CCGGGATTTTACTTCCCGtttt                                                                                                                                                                                      >  1:117082/1‑237 (MQ=255)
                                                       ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGA‑T‑G‑TTT‑TCCA‑CAACC‑T‑T‑TA‑ACGCCCC‑G‑CTGGGGGGGATTAACG‑AAC‑CG‑CTGGGAATTACCTTTCtttt                                                                                                                                                                                        >  1:1606354/1‑237 (MQ=255)
                                                       ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGC‑T‑G‑ATT‑CCCC‑CCACC‑T‑T‑AA‑CCCCCAC‑G‑CTGGTGGGGATTACCG‑AAC‑CC‑CCGGGATTTTTCTTCCTGttta                                                                                                                                                                                      >  1:1559578/1‑237 (MQ=255)
                                                       ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGC‑G‑G‑TTT‑TCCG‑CCACC‑T‑A‑CA‑ACGCCCT‑T‑CTGGTGGGGAATACGG‑AACACC‑CGGGAGTTTACTTTctctgca                                                                                                                                                                                       >  2:1641070/1‑233 (MQ=255)
                                                       ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGC‑CTTGT‑T‑G‑ATT‑TCCC‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGGGGGGATTACCG‑AAC‑CG‑CTGGGATTTACCTTCCTGTTCa                                                                                                                                                                                      >  1:323525/1‑239 (MQ=255)
                                                         ggcagcaTCTGCAAGAGTTCATTTGGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCAt                                                                                                                                                                                     <  1:678105/237‑1 (MQ=255)
                                                         cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGC‑T‑G‑TTT‑TCCC‑CCACC‑T‑T‑AA‑CCGCCAC‑G‑CTGGGGGGGATTACCG‑AAA‑CG‑CTGGGAATTATCTTCCTGTTCAtt                                                                                                                                                                                    >  1:953174/1‑239 (MQ=255)
                                                         cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTC‑T‑G‑CTT‑CCCG‑CCACC‑C‑T‑AA‑CCCCCCT‑G‑CTGGGGGGGATTACCG‑AAC‑CG‑CCGGAATTTTTCTTCCTTTTCAtt                                                                                                                                                                                    >  1:1704723/1‑239 (MQ=255)
                                                         cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGG‑T‑G‑TTT‑TCCC‑CCACC‑C‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGATTACCC‑AAC‑CG‑CCGGGATTTACCTTCCTGTTCCtt                                                                                                                                                                                    >  1:546418/1‑239 (MQ=255)
                                                         cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑TTT‑CCCG‑CACCC‑T‑T‑AA‑CCCCCCT‑G‑CTGGTGGGGATTACCC‑CAC‑CG‑CTGGGATTTTCCTCTCTCTTCAtt                                                                                                                                                                                    >  1:1532861/1‑239 (MQ=255)
                                                            agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GGTGT‑T‑G‑GTT‑TCCC‑CCACC‑C‑T‑AA‑CCGCCCC‑G‑CTGGGGGGGGATAACG‑AAA‑CC‑CCGGGATTTACCTTTCTTGTCAtttt                                                                                                                                                                                  >  1:1494959/1‑237 (MQ=255)
                                                            agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GCTGC‑T‑G‑GTT‑TCCGCCCACC‑T‑A‑AA‑CC‑CCCT‑C‑CCGGGGGGGATTACCG‑AAC‑CC‑CCCGAATTTTACTTCCCTTTCATTTc                                                                                                                                                                                  >  1:285751/1‑238 (MQ=255)
                                                            agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTT‑T‑GTTTT‑CCCC‑AAACC‑T‑T‑AA‑‑CGCCAT‑G‑CTGGGGGGGGGTAACGCACC‑CA‑CCGGAATTT‑CCTCTCTGTTCAttttt                                                                                                                                                                                 >  1:358652/1‑237 (MQ=255)
                                                            agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCC‑CCACC‑C‑T‑AA‑CCCCCCC‑G‑CTGGGGGGGATTACCG‑AAC‑CG‑CTGGGAATTACCTTCCTGTTCttttt                                                                                                                                                                                  >  1:1158579/1‑237 (MQ=255)
                                                            agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGC‑T‑G‑ATT‑TCCC‑CAACC‑T‑T‑AA‑CCGCCCC‑G‑CCGGGGGGGATTACCG‑AAC‑CG‑CTGGGATTTTCCTTCCTGTTCTTTTc                                                                                                                                                                                  >  1:1341698/1‑238 (MQ=255)
                                                                 cTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGC‑T‑T‑TTT‑CCCC‑CACCC‑TCA‑AA‑CCCCCAG‑C‑GGGGGGGGGAGTACTG‑AAC‑CC‑CGGCAATTTCTCTT‑CTGTTCAtttgtcccct                                                                                                                                                                            >  2:1835251/1‑232 (MQ=255)
                                                                            cAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATATACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑‑GCGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGt                                                                                                                                                                >  1:528846/1‑239 (MQ=255)
                                                                                            ccagtGAATTCTTTGTTCCGGGACGGCGTTTTTGCCC‑GCCGCGTTAACTAAAAAT‑TTTTGGGGGCCGTGGTATTTTTTTTGGGGTTTTCCTCCACTGCCGCACGGAAAAC‑TGGGG‑AAAAG‑GG‑GGGGGG‑TTTGC‑T‑T‑TTC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTggc                                                                                                                                                 <  2:1543897/235‑1 (MQ=255)
                                                                                                     tctttgttCCGGGGGGGCGTTTTTCCCC‑TGCGCGTAAACAAAAAAT‑TTGTGGGTGCTGTGGGTTTTTGTTTGGCATTGTCTTTCCCCCCCCCCCCGAAAAA‑GGGGG‑TAAAG‑GG‑GGGGGT‑TTTGT‑T‑G‑TTC‑CCCC‑CAACT‑T‑C‑CG‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAAt                                                                                                                                        <  2:1158579/236‑1 (MQ=255)
                                                                                                        ttttccccGGAGGGCGGTTTTGCCC‑TGCACGGTAACTAAAAAA‑TTTTTGGTGCGGGGGGCTTTTTTTTAGCGATGTACTTCCCTGCCGCACCGAAAAA‑TCGGG‑TAAAA‑GT‑GGGGGG‑TTTGC‑T‑G‑ATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGt                                                                                                                                      <  1:430904/233‑1 (MQ=255)
                                                                                                          tttCCCGGAGGGGGTTTTTCCCC‑TGCAGGGTACCACAAAAT‑TCTTGGGTGCGGGGGGCTTTTTTTTAGCGATATACTTCCCTGCCGCCCCGAAAAT‑TGGGG‑TAAAG‑GG‑GGCGGT‑CTTGC‑T‑G‑ATT‑CCCG‑AACCC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGa                                                                                                                                   <  1:1106571/238‑1 (MQ=255)
                                                                                                           ttCCGGGAGGGGGTTTTTCCCC‑TGCAGGATACCTAAAAAT‑TTTTGGGTGCGGGGGGCTTTTTTTTAGCTATGTCCTTCACTGCCGCACCGAAAAA‑TGGGG‑TAAAA‑GG‑GGCGGG‑CTTGC‑T‑G‑TTT‑CCCG‑AACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGAc                                                                                                                                  <  1:831734/239‑1 (MQ=255)
                                                                                                           tccccGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCTTTTCTTTAGCGATGTCCTTCCCTGCCGCCCCGGAAAA‑TCGGG‑TAAAA‑GG‑GGCGGG‑CTTGG‑T‑G‑ATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑g                                                                                                                                                                                                                                     <  1:86427/142‑1 (MQ=255)
                                                                                                               cGGAGGGCGGTTTTCCCC‑TGCACGTTAACTAAAAAT‑TCTTGGGGGCGGGGGGCTTTTCTTTAGGGTTGTACTTCCCTGCCGCACCGAAAAA‑TCGGG‑AAAAG‑GG‑GGGGGG‑CTTGC‑T‑G‑ATC‑CCCG‑CAACC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTa                                                                                                                              <  1:603958/239‑1 (MQ=255)
                                                                                                                gggggggggTTTTGCCCATGCCGGATAACCAAAAAA‑TTTTGGGGGCGGGGGGTTTTTTTTTGGGGATTTCCTCCACTGCCGC‑CCCGAAAA‑ACGGG‑AAAAA‑GG‑GGGGGG‑GTTGC‑T‑T‑ATT‑CCCC‑GAACCTT‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTa                                                                                                                              <  2:695002/232‑1 (MQ=255)
                                                                                                                     gggtttttGCCC‑TGCACGGTAACTAAAAAA‑TTTTTGGTGCGGGGGGCTTTTTTTTGGCGATGTACTTCACTGCCGCCCGGAAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑TTTGC‑T‑G‑ATC‑CCCG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTa                                                                                                                         <  1:1273821/234‑1 (MQ=255)
                                                                                                                     gggtttttCCCC‑TGCAGGGTAACTAAAAAA‑TTTTGGGTGCGGGGGTTTTTTTTTTAGCGATTTACTTCCCGGCCGCACCGAAAAA‑TGGGG‑TAAAG‑GG‑GGCGGG‑TTTGC‑T‑G‑ATC‑CCCG‑CAACT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTa                                                                                                                         <  1:1557079/234‑1 (MQ=255)
                                                                                                                     gCGTTTTTGCCC‑TGCACGGTACCTAAAAAA‑TTTTGGGTGCGGTGGGTTTTTCTTTAGCGATTTACTTCCCTGCCGCCCCGAAAAA‑TGGGG‑AAAAA‑GT‑GGGGGG‑TTTGC‑T‑A‑ATC‑CCCG‑‑AACC‑T‑T‑AACCCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTa                                                                                                                         <  1:44378/238‑1 (MQ=255)
                                                                                                                      gtgttgtcccc‑TGCAGATTATCTAAAATA‑TTTGTGGTGCGGTGGTTTTTTTTTGGGCGTGGTATTTCCCGGCCGCACCGAAAAA‑TC‑GG‑TAAAA‑GG‑GGGGGGTTTTGC‑T‑G‑‑TT‑CCCG‑CCACC‑T‑TCAC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTCCCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTAt                                                                                                                        <  2:546418/230‑1 (MQ=255)
                                                                                                                        tttttCCCC‑TGCACGGTAACTAAAAAT‑TTTTTGGTGCCGTGGGCTTTTTTTTAGCGATGTACTCCCCTGCCGCCCCGGAAAA‑TCGGG‑AAAAA‑GG‑GGCGGG‑TTTGC‑T‑G‑ATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTAtct                                                                                                                      <  1:1235655/237‑1 (MQ=255)
                                                                                                                        gTTTTGCCC‑TGCCCGGCACATAAAAAA‑TCTGGGGGGCGGGGGTCATTTTTTTGGGTTTGTTCTTCCCCGCCCCACCGCAAAA‑TGGGA‑AAAAG‑GG‑GGCGGG‑CTGGC‑T‑C‑TTC‑CCCA‑CAATT‑T‑T‑CA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTAtct                                                                                                                      <  2:1832634/238‑1 (MQ=255)
                                                                                                                              ccc‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCTTTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGGGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTa                                                                                                                                                                                                  <  1:1039007/156‑1 (MQ=255)
                                                                                                                                 ccgCACGTGAAGTCAAAAAGTTTTTGGGCCCGTGGGTTTTTTTTTGGCGTTGAACTTCACCGCC‑CAACGGAAAA‑AGGGGATAAGA‑GG‑GGGGGG‑TTTGC‑T‑G‑CTC‑CCCG‑AAACT‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTtggtg                                                                                                              <  2:1319888/237‑1 (MQ=255)
                                                                                                                                  tGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTC‑T‑G‑ATT‑CCCC‑CCACC‑T‑T‑AA‑CCCCCCT‑G‑CTGGTGGGGATTACCG‑AAC‑CC‑CCGGGATTTTCCTTCCTGtttttttta                                                                                                                                                                                 >  1:572918/1‑163 (MQ=255)
                                                                                                                                         tAACTAAAAAT‑TTTTTGGTGCCGTGGGTTTTTTTTTGGCGTTTTACTCCCCTGCCGC‑CCGGAAAAGTCGGG‑‑AAAA‑GTGGGGGGG‑TTTGC‑T‑T‑ATC‑CCCG‑CACCT‑T‑A‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGc                                                                                                      <  1:416031/238‑1 (MQ=255)
                                                                                                                                                   attttttGGCGCCGTGGGCTTTTTTTTAGCGATGTCCTCCCCTCCCGCCCCGAAAAA‑TGGGG‑AAAAA‑GG‑GGCGGT‑CTTGC‑T‑G‑ATC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCg                                                                                            <  1:151393/235‑1 (MQ=255)
                                                                                                                                                     tCTTGGGTGCCGTGGGCATTTCTTTAGCGATGTCCTTCCCCGCCGCCCCGGAAAA‑TCGGG‑AAAAG‑GG‑GGGGGG‑CTGGC‑T‑G‑ATC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑c                                                                                                                                                                                                           <  1:866634/126‑1 (MQ=255)
                                                                                                                                                      tttgggcgCCGGGGGTTTTTTTTGAGCTGTGTATTCCACGGCCGCACCGGAAAA‑TGGGG‑AAAAA‑GT‑GGGGGG‑TTTGC‑T‑G‑TTC‑CCCG‑CAACT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAg                                                                                         <  1:514912/232‑1 (MQ=255)
                                                                                                                                                           gTGCCGGGGGCTTTTTTTTGGCGATGTCTTTCCCTGCCGCCCCGGAAAA‑GCGGG‑TAAGG‑GG‑GGGGGG‑TTTGC‑T‑G‑TTT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCt                                                                                     <  2:176832/238‑1 (MQ=255)
                                                                                                                                                             gcggTGGGTTTTTTTTTAGCGATTTTTTCCACTCCCGCCCGGAAAAA‑TGGGG‑AAAAG‑GG‑GGGGGG‑TTTGC‑T‑G‑ATC‑CCCG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGa                                                                                   <  1:172106/235‑1 (MQ=255)
                                                                                                                                                               cGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑TCCC‑CCACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGGATTACCG‑AAC‑CC‑CCGGAATTTTCCTTCCTGTTCATTTTACCGTTGCTGTTTTCGGTACACGCCGTGCTGGCGGCCTCCATGTCGACCGTAATGTATTTCTTTTGTGTGGTGGGGAAAATGGGCGGAGGGCTGATTg                                                                                >  1:637932/1‑239 (MQ=255)
                                                                                                                                                                 tGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGATTACCG‑AAC‑CG‑CTGGGATTTACCTTCCTGTTCATTTCACCCTTTCTGTTTTCGGTACACGCCCTGCTGGCGGCCTCAATGTCGACCCTAATGTATCTCTTTTGTGTGGGGGGGGACATGGGCGGGGGGCTGATTg                                                                                >  1:97250/1‑237 (MQ=255)
                                                                                                                                                                           tttAGCGATGTACTTCCCTGCCGCACCGGAAAA‑TGGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATC‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTg                                                                                                                                                                                          <  1:1342616/121‑1 (MQ=255)
                                                                                                                                                                             tAGGGATGTTCTTCCCTGCCGCACCGAAAAA‑TCGGG‑AAAAG‑GG‑GGCGGG‑CTTGC‑T‑G‑ATC‑CCCG‑AACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCg                                                                  <  1:1835251/239‑1 (MQ=255)
                                                                                                                                                                                 gttttcttccccTGCCCCCCCGAAAAA‑TCGGT‑AAAAA‑GG‑GGCGGG‑TTTGC‑T‑‑‑ATT‑CCCC‑CAACCTT‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCa                                                                <  1:1207934/226‑1 (MQ=255)
                                                                                                                                                                                   tGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑GTT‑TCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGGATTACCC‑AAC‑CG‑CCggg                                                                                                                                                                                                       >  1:58795/1‑99 (MQ=255)
                                                                                                                                                                                    gtcctccccgcccGCCCCGAAAAT‑TCGGG‑TAAAA‑GG‑GGCGGG‑‑TTGC‑C‑T‑ATTCCCCG‑CACCC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACt                                                           <  1:745572/228‑1 (MQ=255)
                                                                                                                                                                                       ctccACTCCCGCACCGGAAAA‑CCGGT‑TAAAG‑GT‑GGCGGC‑CTTGC‑T‑G‑ATC‑CCCC‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTCCCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGa                                                        <  1:772112/236‑1 (MQ=255)
                                                                                                                                                                                        ttCACTGCCGCCCCGAAAAA‑TGGGT‑TAAAA‑GT‑GGCGGG‑TTTGC‑T‑G‑ATC‑CCCG‑CACCT‑T‑A‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTa                                                                                                                                                                                                  <  2:1741903/100‑1 (MQ=255)
                                                                                                                                                                                          cACGGCCGCCCGGAAAAA‑TGGGG‑AAAAG‑GT‑GGCGGG‑CTTGC‑T‑G‑ATC‑CCCG‑CAACT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATcc                                                     <  1:222330/239‑1 (MQ=255)
                                                                                                                                                                                             ccccGCCCCGTAAAA‑TGGGA‑AAAAG‑GG‑GGGGGG‑CTTGC‑T‑G‑‑TT‑CCCC‑CACCT‑T‑T‑AACCCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGa                                                  <  2:637932/237‑1 (MQ=255)
                                                                                                                                                                                              cccccagcgaaaaa‑TCGGG‑TAAAG‑TG‑GGCGGG‑TTTGC‑T‑G‑ATT‑CCCG‑CACCC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGAt                                                 <  1:1025745/229‑1 (MQ=255)
                                                                                                                                                                                                  cACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CAACC‑C‑T‑AA‑CCGCCAT‑G‑CTGGGGGGGATTACCG‑AAC‑CG‑CCGGGATTTACCTTCCTTTTCATTTTACCGTTTCTTTTTGCGGGACACGCCCTGCTGGCGGcccccatt                                                                                                                                       >  1:1104530/1‑143 (MQ=255)
                                                                                                                                                                                                  cACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCC‑CAACC‑T‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGATTACCG‑AAC‑CG‑CTGGGATTTTCCTTCCTGtt                                                                                                                                                                                        >  1:1741903/1‑100 (MQ=255)
                                                                                                                                                                                                      cgAAAA‑ATGGG‑TAAAAGGG‑GGGGGG‑TTTGT‑T‑T‑TTC‑CCCG‑CACCC‑T‑A‑AC‑CCGCCAG‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGc                                          <  1:544876/238‑1 (MQ=255)
                                                                                                                                                                                                        aaaa‑GCGGG‑TAAAG‑GG‑GGCGGG‑CTTGC‑T‑G‑TTC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAAc                                       <  1:1548336/239‑1 (MQ=255)
                                                                                                                                                                                                         aaaaggggg‑AAAAG‑GG‑GGCGGT‑TTTGC‑T‑G‑TTC‑CCCG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAAc                                       <  1:225827/233‑1 (MQ=255)
                                                                                                                                                                                                             tCGGG‑TAAAG‑GG‑GGGGGG‑TTTGC‑T‑G‑‑TT‑CCCC‑GAACC‑T‑TAAA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcg                                   <  1:685951/239‑1 (MQ=255)
                                                                                                                                                                                                             tCGGG‑TAAAG‑GG‑GGCGGG‑TTTGC‑T‑G‑ATC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcg                                   <  1:1336319/239‑1 (MQ=255)
                                                                                                                                                                                                             atgggatAAAT‑GT‑GGCGGG‑CTTGC‑T‑G‑ATC‑CCCC‑CCGCT‑T‑A‑AG‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAAGTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAc                                    <  1:85262/233‑1 (MQ=255)
                                                                                                                                                                                                              cGGG‑TAAAG‑GT‑GGCGGG‑CTTGC‑T‑G‑TTC‑CCCG‑AACCT‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCATCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcgc                                  <  1:1696382/239‑1 (MQ=255)
                                                                                                                                                                                                               ggg‑TAAAG‑GG‑GGGGGT‑TTTGC‑T‑G‑ATC‑CCCC‑CACCC‑T‑A‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcgc                                  <  1:1213019/238‑1 (MQ=255)
                                                                                                                                                                                                                                   ggggttggcggtt‑CCCC‑CCACC‑T‑TAAA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCt                      <  1:953433/227‑1 (MQ=255)
                                                                                                                                                                                                                                      gC‑T‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCaaa              >  2:24706/1‑239 (MQ=255)
                                                                                                                                                                                                                                       ttccgaaTT‑CCCG‑CATCC‑T‑T‑AA‑CCGCCTT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCa                <  1:1054896/233‑1 (MQ=255)
                                                                                                                                                                                                                                          gg‑ATC‑CCCG‑AAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt             <  1:1641070/237‑1 (MQ=255)
                                                                                                                                                                                                                                           tgttt‑CCCG‑CACCC‑T‑A‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTCCCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGTAACCACGCGGATATGATGCTGACCCAAAt             <  1:1425309/235‑1 (MQ=255)
                                                                                                                                                                                                                                           ctgttccccc‑CAACT‑T‑A‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt             <  1:383048/233‑1 (MQ=255)
                                                                                                                                                                                                                                            tctt‑CCCC‑GAATC‑T‑T‑AATCCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt             <  1:725034/236‑1 (MQ=255)
                                                                                                                                                                                                                                            gattccccG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt             <  1:1586126/233‑1 (MQ=255)
                                                                                                                                                                                                                                                cgcgg‑CAACT‑G‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CGGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCa        <  2:1532861/235‑1 (MQ=255)
                                                                                                                                                                                                                                                 cccG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCAt       >  1:614218/1‑239 (MQ=255)
                                                                                                                                                                                                                                                      cAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCTGCCTCAATGTCGACCGTAATTTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg   >  1:1578875/1‑239 (MQ=255)
                                                                                                                                                                                                                                                      cAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAg                                                                                         <  1:439076/153‑1 (MQ=255)
                                                                                                                                                                                                                                                      cAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAg                                                                                         >  2:439076/1‑153 (MQ=255)
                                                                                                                                                                                                                                                      cAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg   >  1:31486/1‑239 (MQ=255)
                                                                                                                                                                                                                                                       aaCC‑T‑T‑AATCCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg   <  1:1740476/239‑1 (MQ=255)
                                                                                                                                                                                                                                                       aaCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACTTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGGt  >  2:588481/1‑239 (MQ=255)
                                                                                                                                                                                                                                                       aaCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCATTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGGt  <  1:1310644/239‑1 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                       
ACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGC‑T‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AAC‑CG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGGT  >  NC_007779/3777518‑3777991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑