Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,777,758 T→A 10.0% L316* (TTA→TAA)  Y75_RS18735 → PTS transporter subunit EIIC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077793,777,7580TA10.0% 204.4 / 2.7 107L316* (TTA→TAA) Y75_RS18735PTS transporter subunit EIIC
Reads supporting (aligned to +/- strand):  ref base T (41/52);  new base A (3/8);  total (46/61)
Fisher's exact test for biased strand distribution p-value = 3.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 108 total aligned reads displayed.

TTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGGT  >  NC_007779/3777526‑3777991
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                 
tttATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGCAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAACAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CCTCCT‑C‑TTT‑TCCC‑CCACC‑A‑T‑AA‑ccc                                                                                                                                                                                                                                            >  1:836824/1‑237 (MQ=255)
        tGGCCCGGCAGCTGTGAAGGGCGGCTTTCAGATGTCCGGGGCGCAGCATCTGAAAGAGTTAAGTTTGAGCGCCGAGCCGCTAAAATCGTTGTTCCCGGAAGGCGTTTTTGCCC‑TGCACGGTAACTAAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑Ctgg                                                                                                                                                                                                                                 <  1:760360/239‑1 (MQ=255)
          gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGCT‑G‑ATT‑CCCC‑CCACC‑T‑T‑AA‑CCGCCAT‑G‑Ctggtg                                                                                                                                                                                                                               >  1:411160/1‑239 (MQ=255)
          gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTCT‑G‑ATT‑CCCC‑CCACC‑C‑T‑TA‑Ccccccacacgggg                                                                                                                                                                                                                                 >  1:1475809/1‑230 (MQ=255)
          gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑TCCC‑CCCCC‑C‑T‑AA‑ACGCCCT‑G‑Ctgggg                                                                                                                                                                                                                               >  1:1399069/1‑237 (MQ=255)
          gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CCTGTT‑G‑ATT‑TCCG‑CAACC‑C‑T‑AA‑CCGCCCT‑G‑Ctggtg                                                                                                                                                                                                                               >  1:85941/1‑239 (MQ=255)
          gTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CCTGCTCG‑TTT‑CCCC‑CACCC‑T‑C‑AA‑CC‑CCAT‑T‑Ctgggg                                                                                                                                                                                                                               >  1:1409023/1‑237 (MQ=255)
                       tGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGCT‑G‑AGT‑CCCG‑CACCC‑C‑T‑AA‑CCCCCCA‑G‑CTgggggggggtatcgcac                                                                                                                                                                                                                  >  2:430904/1‑228 (MQ=255)
                              ggcATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGCT‑G‑GTT‑TCCG‑CAAAC‑T‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGAATACCG‑AACCG‑CCggg                                                                                                                                                                                                         >  1:176832/1‑238 (MQ=255)
                              ggcATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑TTT‑CCCC‑CCCCC‑T‑T‑AA‑CCGCCCT‑G‑CTGGTGGGGAGTACCG‑AACCG‑CTggg                                                                                                                                                                                                         >  1:1731551/1‑238 (MQ=255)
                              ggcATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAAATATCG‑AAACG‑CTggt                                                                                                                                                                                                         >  1:200520/1‑238 (MQ=255)
                                     aGATGTCCGGGGCGCAGCATCTGAAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTAAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑c                                                                                                                                                                                                             <  1:1546703/228‑1 (MQ=255)
                                     aGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGCT‑G‑ATT‑CCCC‑CCACC‑T‑T‑AA‑CCCCCAC‑G‑CCTGGGGGGATTATCG‑CAACC‑CTCGAATTTAc                                                                                                                                                                                                   >  1:395469/1‑238 (MQ=255)
                                          tACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑AGTGCG‑G‑AAT‑CCCC‑CCACC‑C‑C‑AA‑CCCGCATCG‑CTGG‑GGGAATTACCG‑AACCA‑CTTCGATTTtccttcct                                                                                                                                                                                             >  1:1798591/1‑239 (MQ=255)
                                            cTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑GTT‑ACCG‑CAACC‑C‑T‑AA‑ACGCCCT‑G‑CTGGGGGGGATTAACG‑AACCG‑CTGGAAGTTTTCTTCCTGt                                                                                                                                                                                           >  1:505681/1‑239 (MQ=255)
                                             tGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTTCT‑G‑GTT‑TCCG‑CCACC‑C‑T‑TA‑CCGCCCC‑G‑CTGGGGGGGATTACCG‑GACCC‑CCGGGATTTTACTTCCTGtt                                                                                                                                                                                          >  1:583632/1‑239 (MQ=255)
                                               ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTCT‑G‑GTT‑CCCG‑CCCCC‑C‑T‑AA‑ACGCCCC‑GCCTGGGGGGAA‑TACCG‑AACCGCCGGGAATTTACCtctctcttt                                                                                                                                                                                         >  2:1546703/1‑231 (MQ=255)
                                               ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑GTT‑TCCC‑CAACC‑T‑T‑TA‑CCCCCCT‑G‑CCGGTGGGGATTACCG‑AAACC‑CTTGAATTTACCTTCCTTTTCa                                                                                                                                                                                        >  1:1620298/1‑239 (MQ=255)
                                               ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑TCCC‑CCACC‑C‑T‑AA‑ACCCCAC‑G‑CTGGGGGGGATTATCG‑AACCC‑CCGGGATTTTACTTCCCGtttt                                                                                                                                                                                        >  1:117082/1‑237 (MQ=255)
                                               ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGAT‑G‑TTT‑TCCA‑CAACC‑T‑T‑TA‑ACGCCCC‑G‑CTGGGGGGGATTAACG‑AACCG‑CTGGGAATTACCTTTCtttt                                                                                                                                                                                          >  1:1606354/1‑237 (MQ=255)
                                               ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGCT‑G‑ATT‑CCCC‑CCACC‑T‑T‑AA‑CCCCCAC‑G‑CTGGTGGGGATTACCG‑AACCC‑CCGGGATTTTTCTTCCTGttta                                                                                                                                                                                        >  1:1559578/1‑237 (MQ=255)
                                               ggCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGC‑CTTGTT‑G‑ATT‑TCCC‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGGGGGGATTACCG‑AACCG‑CTGGGATTTACCTTCCTGTTCa                                                                                                                                                                                        >  1:323525/1‑239 (MQ=255)
                                                 ggcagcaTCTGCAAGAGTTCATTTGGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCAt                                                                                                                                                                                       <  1:678105/237‑1 (MQ=255)
                                                 cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGCT‑G‑TTT‑TCCC‑CCACC‑T‑T‑AA‑CCGCCAC‑G‑CTGGGGGGGATTACCG‑AAACG‑CTGGGAATTATCTTCCTGTTCAtt                                                                                                                                                                                      >  1:953174/1‑239 (MQ=255)
                                                 cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTCT‑G‑CTT‑CCCG‑CCACC‑C‑T‑AA‑CCCCCCT‑G‑CTGGGGGGGATTACCG‑AACCG‑CCGGAATTTTTCTTCCTTTTCAtt                                                                                                                                                                                      >  1:1704723/1‑239 (MQ=255)
                                                 cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGGT‑G‑TTT‑TCCC‑CCACC‑C‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGATTACCC‑AACCG‑CCGGGATTTACCTTCCTGTTCCtt                                                                                                                                                                                      >  1:546418/1‑239 (MQ=255)
                                                 cgcAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑TTT‑CCCG‑CACCC‑T‑T‑AA‑CCCCCCT‑G‑CTGGTGGGGATTACCC‑CACCG‑CTGGGATTTTCCTCTCTCTTCAtt                                                                                                                                                                                      >  1:1532861/1‑239 (MQ=255)
                                                    agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GGTGTT‑G‑GTT‑TCCC‑CCACC‑C‑T‑AA‑CCGCCCC‑G‑CTGGGGGGGGATAACG‑AAACC‑CCGGGATTTACCTTTCTTGTCAtttt                                                                                                                                                                                    >  1:1494959/1‑237 (MQ=255)
                                                    agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GCTGCT‑G‑GTT‑TCCGCCCACC‑T‑A‑AA‑CC‑CCCT‑C‑CCGGGGGGGATTACCG‑AACCC‑CCCGAATTTTACTTCCCTTTCATTTc                                                                                                                                                                                    >  1:285751/1‑238 (MQ=255)
                                                    agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTTT‑GTTTT‑CCCC‑AAACC‑T‑T‑AA‑‑CGCCAT‑G‑CTGGGGGGGGGTAACGCACCCA‑CCGGAATTT‑CCTCTCTGTTCAttttt                                                                                                                                                                                   >  1:358652/1‑237 (MQ=255)
                                                    agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑CCCC‑CCACC‑C‑T‑AA‑CCCCCCC‑G‑CTGGGGGGGATTACCG‑AACCG‑CTGGGAATTACCTTCCTGTTCttttt                                                                                                                                                                                    >  1:1158579/1‑237 (MQ=255)
                                                    agcaTCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGCT‑G‑ATT‑TCCC‑CAACC‑T‑T‑AA‑CCGCCCC‑G‑CCGGGGGGGATTACCG‑AACCG‑CTGGGATTTTCCTTCCTGTTCTTTTc                                                                                                                                                                                    >  1:1341698/1‑238 (MQ=255)
                                                         cTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CGTGCT‑T‑TTT‑CCCC‑CACCC‑TCA‑AA‑CCCCCAG‑C‑GGGGGGGGGAGTACTG‑AACCC‑CGGCAATTTCTCTT‑CTGTTCAtttgtcccct                                                                                                                                                                              >  2:1835251/1‑232 (MQ=255)
                                                                    cAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATATACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑‑GCGGG‑CTTGCT‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGt                                                                                                                                                                 >  1:528846/1‑239 (MQ=255)
                                                                                    ccagtGAATTCTTTGTTCCGGGACGGCGTTTTTGCCC‑GCCGCGTTAACTAAAAAT‑TTTTGGGGGCCGTGGTATTTTTTTTGGGGTTTTCCTCCACTGCCGCACGGAAAAC‑TGGGG‑AAAAG‑GG‑GGGGGG‑TTTGCT‑T‑TTC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTggc                                                                                                                                                 <  2:1543897/235‑1 (MQ=255)
                                                                                             tctttgttCCGGGGGGGCGTTTTTCCCC‑TGCGCGTAAACAAAAAAT‑TTGTGGGTGCTGTGGGTTTTTGTTTGGCATTGTCTTTCCCCCCCCCCCCGAAAAA‑GGGGG‑TAAAG‑GG‑GGGGGT‑TTTGTT‑G‑TTC‑CCCC‑CAACT‑T‑C‑CG‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAAt                                                                                                                                        <  2:1158579/236‑1 (MQ=255)
                                                                                                ttttccccGGAGGGCGGTTTTGCCC‑TGCACGGTAACTAAAAAA‑TTTTTGGTGCGGGGGGCTTTTTTTTAGCGATGTACTTCCCTGCCGCACCGAAAAA‑TCGGG‑TAAAA‑GT‑GGGGGG‑TTTGCT‑G‑ATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGt                                                                                                                                      <  1:430904/233‑1 (MQ=255)
                                                                                                  tttCCCGGAGGGGGTTTTTCCCC‑TGCAGGGTACCACAAAAT‑TCTTGGGTGCGGGGGGCTTTTTTTTAGCGATATACTTCCCTGCCGCCCCGAAAAT‑TGGGG‑TAAAG‑GG‑GGCGGT‑CTTGCT‑G‑ATT‑CCCG‑AACCC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGa                                                                                                                                   <  1:1106571/238‑1 (MQ=255)
                                                                                                   ttCCGGGAGGGGGTTTTTCCCC‑TGCAGGATACCTAAAAAT‑TTTTGGGTGCGGGGGGCTTTTTTTTAGCTATGTCCTTCACTGCCGCACCGAAAAA‑TGGGG‑TAAAA‑GG‑GGCGGG‑CTTGCT‑G‑TTT‑CCCG‑AACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGAc                                                                                                                                  <  1:831734/239‑1 (MQ=255)
                                                                                                   tccccGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCTTTTCTTTAGCGATGTCCTTCCCTGCCGCCCCGGAAAA‑TCGGG‑TAAAA‑GG‑GGCGGG‑CTTGGT‑G‑ATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑g                                                                                                                                                                                                                                      <  1:86427/142‑1 (MQ=255)
                                                                                                       cGGAGGGCGGTTTTCCCC‑TGCACGTTAACTAAAAAT‑TCTTGGGGGCGGGGGGCTTTTCTTTAGGGTTGTACTTCCCTGCCGCACCGAAAAA‑TCGGG‑AAAAG‑GG‑GGGGGG‑CTTGCT‑G‑ATC‑CCCG‑CAACC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTa                                                                                                                              <  1:603958/239‑1 (MQ=255)
                                                                                                        gggggggggTTTTGCCCATGCCGGATAACCAAAAAA‑TTTTGGGGGCGGGGGGTTTTTTTTTGGGGATTTCCTCCACTGCCGC‑CCCGAAAA‑ACGGG‑AAAAA‑GG‑GGGGGG‑GTTGCT‑T‑ATT‑CCCC‑GAACCTT‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTa                                                                                                                              <  2:695002/232‑1 (MQ=255)
                                                                                                             gggtttttGCCC‑TGCACGGTAACTAAAAAA‑TTTTTGGTGCGGGGGGCTTTTTTTTGGCGATGTACTTCACTGCCGCCCGGAAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑TTTGCT‑G‑ATC‑CCCG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTa                                                                                                                         <  1:1273821/234‑1 (MQ=255)
                                                                                                             gggtttttCCCC‑TGCAGGGTAACTAAAAAA‑TTTTGGGTGCGGGGGTTTTTTTTTTAGCGATTTACTTCCCGGCCGCACCGAAAAA‑TGGGG‑TAAAG‑GG‑GGCGGG‑TTTGCT‑G‑ATC‑CCCG‑CAACT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTa                                                                                                                         <  1:1557079/234‑1 (MQ=255)
                                                                                                             gCGTTTTTGCCC‑TGCACGGTACCTAAAAAA‑TTTTGGGTGCGGTGGGTTTTTCTTTAGCGATTTACTTCCCTGCCGCCCCGAAAAA‑TGGGG‑AAAAA‑GT‑GGGGGG‑TTTGCT‑A‑ATC‑CCCG‑‑AACC‑T‑T‑AACCCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTa                                                                                                                         <  1:44378/238‑1 (MQ=255)
                                                                                                              gtgttgtcccc‑TGCAGATTATCTAAAATA‑TTTGTGGTGCGGTGGTTTTTTTTTGGGCGTGGTATTTCCCGGCCGCACCGAAAAA‑TC‑GG‑TAAAA‑GG‑GGGGGGTTTTGCT‑G‑‑TT‑CCCG‑CCACC‑T‑TCAC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTCCCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTAt                                                                                                                        <  2:546418/230‑1 (MQ=255)
                                                                                                                tttttCCCC‑TGCACGGTAACTAAAAAT‑TTTTTGGTGCCGTGGGCTTTTTTTTAGCGATGTACTCCCCTGCCGCCCCGGAAAA‑TCGGG‑AAAAA‑GG‑GGCGGG‑TTTGCT‑G‑ATT‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTAtct                                                                                                                      <  1:1235655/237‑1 (MQ=255)
                                                                                                                gTTTTGCCC‑TGCCCGGCACATAAAAAA‑TCTGGGGGGCGGGGGTCATTTTTTTGGGTTTGTTCTTCCCCGCCCCACCGCAAAA‑TGGGA‑AAAAG‑GG‑GGCGGG‑CTGGCT‑C‑TTC‑CCCA‑CAATT‑T‑T‑CA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTAtct                                                                                                                      <  2:1832634/238‑1 (MQ=255)
                                                                                                                      ccc‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCTTTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGGGGG‑CTTGCT‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTa                                                                                                                                                                                                    <  1:1039007/156‑1 (MQ=255)
                                                                                                                         ccgCACGTGAAGTCAAAAAGTTTTTGGGCCCGTGGGTTTTTTTTTGGCGTTGAACTTCACCGCC‑CAACGGAAAA‑AGGGGATAAGA‑GG‑GGGGGG‑TTTGCT‑G‑CTC‑CCCG‑AAACT‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTtggtg                                                                                                              <  2:1319888/237‑1 (MQ=255)
                                                                                                                          tGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTTCT‑G‑ATT‑CCCC‑CCACC‑T‑T‑AA‑CCCCCCT‑G‑CTGGTGGGGATTACCG‑AACCC‑CCGGGATTTTCCTTCCTGtttttttta                                                                                                                                                                                   >  1:572918/1‑163 (MQ=255)
                                                                                                                                 tAACTAAAAAT‑TTTTTGGTGCCGTGGGTTTTTTTTTGGCGTTTTACTCCCCTGCCGC‑CCGGAAAAGTCGGG‑‑AAAA‑GTGGGGGGG‑TTTGCT‑T‑ATC‑CCCG‑CACCT‑T‑A‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGc                                                                                                      <  1:416031/238‑1 (MQ=255)
                                                                                                                                         aaa‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑GTTGCT‑T‑ATT‑CCCC‑CCACC‑C‑T‑TA‑CCCCCCT‑G‑CCGGTGGGGATTAACG‑CACCC‑CCGGAATTTATCTTCCTCTTCATTTTTCCGTTGCCGTTTTTGGGTGCAC‑CCGCGCCTGGGGCCCCCACTGTCGCCGGTATTTTATCCCTTTGTTGTGTTGGGCAACAgggc                                                                                              >  2:1383918/1‑238 (MQ=255)
                                                                                                                                           attttttGGCGCCGTGGGCTTTTTTTTAGCGATGTCCTCCCCTCCCGCCCCGAAAAA‑TGGGG‑AAAAA‑GG‑GGCGGT‑CTTGCT‑G‑ATC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCg                                                                                            <  1:151393/235‑1 (MQ=255)
                                                                                                                                             tCTTGGGTGCCGTGGGCATTTCTTTAGCGATGTCCTTCCCCGCCGCCCCGGAAAA‑TCGGG‑AAAAG‑GG‑GGGGGG‑CTGGCT‑G‑ATC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑c                                                                                                                                                                                                             <  1:866634/126‑1 (MQ=255)
                                                                                                                                              tttgggcgCCGGGGGTTTTTTTTGAGCTGTGTATTCCACGGCCGCACCGGAAAA‑TGGGG‑AAAAA‑GT‑GGGGGG‑TTTGCT‑G‑TTC‑CCCG‑CAACT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAg                                                                                         <  1:514912/232‑1 (MQ=255)
                                                                                                                                                   gTGCCGGGGGCTTTTTTTTGGCGATGTCTTTCCCTGCCGCCCCGGAAAA‑GCGGG‑TAAGG‑GG‑GGGGGG‑TTTGCT‑G‑TTT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCt                                                                                     <  2:176832/238‑1 (MQ=255)
                                                                                                                                                     gcggTGGGTTTTTTTTTAGCGATTTTTTCCACTCCCGCCCGGAAAAA‑TGGGG‑AAAAG‑GG‑GGGGGG‑TTTGCT‑G‑ATC‑CCCG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGa                                                                                   <  1:172106/235‑1 (MQ=255)
                                                                                                                                                       cGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑TCCC‑CCACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGGATTACCG‑AACCC‑CCGGAATTTTCCTTCCTGTTCATTTTACCGTTGCTG‑TTTTCGGTACACGCCGTG‑CTGGCGGCCTCCATGTCGACCGTAATGTATTTCTTTTGTGTGGTGGGGAAAATGGGCGGAGGGCTGATTg                                                                                >  1:637932/1‑239 (MQ=255)
                                                                                                                                                         tGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCCT‑G‑CTGGGGGGGATTACCG‑AACCG‑CTGGGATTTACCTTCCTGTTCATTTCACCCTTTCTG‑TTTTCGGTACACGCCCTG‑CTGGCGGCCTCAATGTCGACCCTAATGTATCTCTTTTGTGTGGGGGGGGACATGGGCGGGGGGCTGATTg                                                                                >  1:97250/1‑237 (MQ=255)
                                                                                                                                                                ttttttGGCGATGTACTCCACTGCGCCCCCGAAAAA‑TCGGG‑AAAAG‑GG‑GGGGGG‑TTTGCT‑G‑ATC‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGttt                                                                       <  1:1383918/236‑1 (MQ=255)
                                                                                                                                                                   tttAGCGATGTACTTCCCTGCCGCACCGGAAAA‑TGGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATC‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTg                                                                                                                                                                                            <  1:1342616/121‑1 (MQ=255)
                                                                                                                                                                     tAGGGATGTTCTTCCCTGCCGCACCGAAAAA‑TCGGG‑AAAAG‑GG‑GGCGGG‑CTTGCT‑G‑ATC‑CCCG‑AACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCg                                                                  <  1:1835251/239‑1 (MQ=255)
                                                                                                                                                                         gttttcttccccTGCCCCCCCGAAAAA‑TCGGT‑AAAAA‑GG‑GGCGGG‑TTTGCT‑‑‑ATT‑CCCC‑CAACCTT‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCa                                                                <  1:1207934/226‑1 (MQ=255)
                                                                                                                                                                            gtcctccccgcccGCCCCGAAAAT‑TCGGG‑TAAAA‑GG‑GGCGGG‑‑TTGCC‑T‑ATTCCCCG‑CACCC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACt                                                           <  1:745572/228‑1 (MQ=255)
                                                                                                                                                                               ctccACTCCCGCACCGGAAAA‑CCGGT‑TAAAG‑GT‑GGCGGC‑CTTGCT‑G‑ATC‑CCCC‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTCCCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGa                                                        <  1:772112/236‑1 (MQ=255)
                                                                                                                                                                                ttCACTGCCGCCCCGAAAAA‑TGGGT‑TAAAA‑GT‑GGCGGG‑TTTGCT‑G‑ATC‑CCCG‑CACCT‑T‑A‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTa                                                                                                                                                                                                    <  2:1741903/100‑1 (MQ=255)
                                                                                                                                                                                ttCACTGCCGCACCGGAAAA‑CCGGG‑TAAAA‑GG‑GGCGGG‑TTTGCT‑G‑ATC‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGa                                                                                                                                                                                                         <  1:1700701/95‑1 (MQ=255)
                                                                                                                                                                                  cACGGCCGCCCGGAAAAA‑TGGGG‑AAAAG‑GT‑GGCGGG‑CTTGCT‑G‑ATC‑CCCG‑CAACT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATcc                                                     <  1:222330/239‑1 (MQ=255)
                                                                                                                                                                                     ccccGCCCCGTAAAA‑TGGGA‑AAAAG‑GG‑GGGGGG‑CTTGCT‑G‑‑TT‑CCCC‑CACCT‑T‑T‑AACCCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGa                                                  <  2:637932/237‑1 (MQ=255)
                                                                                                                                                                                      cccccagcgaaaaa‑TCGGG‑TAAAG‑TG‑GGCGGG‑TTTGCT‑G‑ATT‑CCCG‑CACCC‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGAt                                                 <  1:1025745/229‑1 (MQ=255)
                                                                                                                                                                                       cccccccGAAAAA‑TCGGG‑TAAAG‑GG‑GGGGGG‑TTGCCT‑G‑ATT‑CCCG‑CACCC‑T‑A‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATg                                                <  1:673971/234‑1 (MQ=255)
                                                                                                                                                                                          cACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑CCCG‑CAACC‑C‑T‑AA‑CCGCCAT‑G‑CTGGGGGGGATTACCG‑AACCG‑CCGGGATTTACCTTCCTTTTCATTTTACCGTTTCTT‑TTTGCGGGACACGCCCTG‑CTGGCGGcccccatt                                                                                                                                       >  1:1104530/1‑143 (MQ=255)
                                                                                                                                                                                              cgAAAA‑ATGGG‑TAAAAGGG‑GGGGGG‑TTTGTT‑T‑TTC‑CCCG‑CACCC‑T‑A‑AC‑CCGCCAG‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGc                                          <  1:544876/238‑1 (MQ=255)
                                                                                                                                                                                                 aaaaggggg‑AAAAG‑GG‑GGCGGT‑TTTGCT‑G‑TTC‑CCCG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAAc                                       <  1:225827/233‑1 (MQ=255)
                                                                                                                                                                                                     tCGGG‑TAAAG‑GG‑GGGGGG‑TTTGCT‑G‑‑TT‑CCCC‑GAACC‑T‑TAAA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcg                                   <  1:685951/239‑1 (MQ=255)
                                                                                                                                                                                                     tCGGG‑TAAAG‑GG‑GGCGGG‑TTTGCT‑G‑ATC‑CCCG‑CACCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcg                                   <  1:1336319/239‑1 (MQ=255)
                                                                                                                                                                                                      cGGG‑TAAAG‑GT‑GGCGGG‑CTTGCT‑G‑TTC‑CCCG‑AACCT‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCATCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcgc                                  <  1:1696382/239‑1 (MQ=255)
                                                                                                                                                                                                       ggg‑TAAAG‑GG‑GGGGGT‑TTTGCT‑G‑ATC‑CCCC‑CACCC‑T‑A‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCAcgc                                  <  1:1213019/238‑1 (MQ=255)
                                                                                                                                                                                                                          ggggttggcggtt‑CCCC‑CCACC‑T‑TAAA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCt                      <  1:953433/227‑1 (MQ=255)
                                                                                                                                                                                                                              ttccgaaTT‑CCCG‑CATCC‑T‑T‑AA‑CCGCCTT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCa                <  1:1054896/233‑1 (MQ=255)
                                                                                                                                                                                                                              gCT‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCaaa              >  2:24706/1‑239 (MQ=255)
                                                                                                                                                                                                                                 gg‑ATC‑CCCG‑AAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt             <  1:1641070/237‑1 (MQ=255)
                                                                                                                                                                                                                                  tgttt‑CCCG‑CACCC‑T‑A‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTCCCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGTAACCACGCGGATATGATGCTGACCCAAAt             <  1:1425309/235‑1 (MQ=255)
                                                                                                                                                                                                                                  ctgttccccc‑CAACT‑T‑A‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt             <  1:383048/233‑1 (MQ=255)
                                                                                                                                                                                                                                   tctt‑CCCC‑GAATC‑T‑T‑AATCCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt             <  1:725034/236‑1 (MQ=255)
                                                                                                                                                                                                                                   gattccccG‑CACCT‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAAt             <  1:1586126/233‑1 (MQ=255)
                                                                                                                                                                                                                                       cgcgg‑CAACT‑G‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CGGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCa        <  2:1532861/235‑1 (MQ=255)
                                                                                                                                                                                                                                        cccG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCAt       >  1:614218/1‑239 (MQ=255)
                                                                                                                                                                                                                                          ccgaaccc‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTATTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCAtt      <  1:974545/233‑1 (MQ=255)
                                                                                                                                                                                                                                             ccccc‑T‑T‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg   <  1:1197545/236‑1 (MQ=255)
                                                                                                                                                                                                                                             cAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCTGCCTCAATGTCGACCGTAATTTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg   >  1:1578875/1‑239 (MQ=255)
                                                                                                                                                                                                                                             cAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAg                                                                                         <  1:439076/153‑1 (MQ=255)
                                                                                                                                                                                                                                             cAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAg                                                                                         >  2:439076/1‑153 (MQ=255)
                                                                                                                                                                                                                                             cAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg   >  1:31486/1‑239 (MQ=255)
                                                                                                                                                                                                                                              cccctt‑t‑AC‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg   <  2:1731551/234‑1 (MQ=255)
                                                                                                                                                                                                                                              caCC‑T‑TAAA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg   <  1:339149/238‑1 (MQ=255)
                                                                                                                                                                                                                                              aaCC‑T‑T‑AATCCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTggg   <  1:1740476/239‑1 (MQ=255)
                                                                                                                                                                                                                                              aaCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACTTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGGt  >  2:588481/1‑239 (MQ=255)
                                                                                                                                                                                                                                              aaCC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCATTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGGt  <  1:1310644/239‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                 
TTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCC‑TGCACGGTAACTCAAAAA‑TCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAA‑TCGGG‑TAAAA‑GT‑GGCGGG‑CTTGCT‑G‑ATT‑CCCG‑CAACC‑T‑T‑AA‑CCGCCAT‑G‑CTGGTGGGAATTACCG‑AACCG‑CTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTG‑TTTGCGGTACACGCCGTG‑CTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGGT  >  NC_007779/3777526‑3777991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑