| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,857,518 | C→A | 8.2% | D255E (GAC→GAA) | gpsA → | NAD(P)H‑dependent glycerol‑3‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 3,857,518 | 0 | C | A | 8.2% | 407.3 / 4.2 | 175 | D255E (GAC→GAA) | gpsA | NAD(P)H‑dependent glycerol‑3‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (108/51); new base A (2/14); total (110/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 177 total aligned reads displayed.
TTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGCAAGGAC > NC_007779/3857282‑3857755 | ttCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCCTGGCGAGCTGGGGCTTACCCGTACCcaca > 1:9861/1‑238 (MQ=255) tCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGGGCTTACCTGTACCGACAAACAGTCGCGTAAccg‑c > 1:847565/1‑238 (MQ=255) cATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGCGGGGGCTGGGCGTTCGGGGGCTTGCATGTCCGGCAAACCCGCCG‑GTAACCG‑CC‑GTTTTggg > 2:595477/1‑237 (MQ=255) aTTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑CGTTTGGCat > 1:1392857/1‑239 (MQ=255) tGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTc > 1:1547492/1‑239 (MQ=255) cAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GGTTTTGCCTGATGCTCgg > 1:664342/1‑239 (MQ=255) cAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCGTGGCGGTCTGGTGGTTACCCGTACCGACAACCAGTCGCGGAACCG‑CC‑GTTTTTGCATGATGCTCgg > 1:901495/1‑239 (MQ=255) cAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGATGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTTCCGACAACCAGTCGCGTAACCG‑CC‑GGTTTGGCCTGATGCTCgg > 1:1742730/1‑239 (MQ=255) tgggcggcGGGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCCCCCGTGGGTTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCAGGGC‑GGGGCTTGGCGATTTGGTGCTTCCCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGt < 1:36872/234‑1 (MQ=255) gcggcgCGGTGAAATTGGTTTTGGCCGTGGGGGCGGGGAGCTCCGGTGGTTTCGGTTTTGGTGGAGGGGCGGGTGCGGCGCTGGTCCCCGGTGGGGTGGCTGAAATGTGGCTTCTGGGTGCGGCG‑TGGGTGGCCGCCCCTGCCCCTTTTAGGGGCAGGGG‑GGGGTTGGCCGTTCTGTTGCTTACCTTTACCGACACCCGGGCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAggg < 2:1318391/238‑1 (MQ=255) cggcgCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGGGCTTTCCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGGATTGTGGTCCGTCAGGGCa > 1:1064510/1‑239 (MQ=255) cgcgGTGAAAAACGTTATTGCCATTGGAGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCGTAGCGAGCTGCGGCGCATCCGTACCGACAACCCATCACGGAAACGCCC‑GTGTTGGC‑TGATGGCCGGCGAGGGccggt > 2:1471440/1‑235 (MQ=255) ttGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCGTGGCGGGTTGGGGCTTACCCGTACCGGCAAACAGTCGCGCGACCC‑CC‑GGTTTGGGATGATGCGCGGTCAGGGCACGGGGGTACAAACCGGGCAg > 2:23611/1‑239 (MQ=255) ccATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCCCCCGTGGGCTGGCTAAAATGTCGCGTCTTGGTGCGGCGCGGGGT‑GCCGACCCTGCCCCCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGga < 1:478994/238‑1 (MQ=255) aTTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGagaa > 1:1489053/1‑239 (MQ=255) gggATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCGTGGCGAGCTGGTGCTTTCCTGTACCGCCAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCCGTCAGGGGATGGATGTACAAACCGCGCCGGAGAAGGTTGGTcc > 2:298522/1‑238 (MQ=255) gTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTTCCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGGCAggggg > 1:16875/1‑239 (MQ=255) tCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAAccg > 1:101074/1‑170 (MQ=255) tATCGTTTTTGGTGCGAATGCGCGTACGGCGCTGATCCCCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGCCCCTGCCCCCTTTATGGGCATGGC‑GGGGTTTGGCGATCTGGTGCTTCCCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAg < 1:625269/204‑1 (MQ=255) tATCGGTTTTGGTGCGAATGCGCGTGCGGCGCTGATCCCCCGTGGGCTGGCTGAAATGTCGCGTCTGGGGGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTAGGGGAATGGC‑GGGGCTGGGCGATCTGGTGCTTACCTGTACCGACAACCAGCCGGGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGc < 1:298522/238‑1 (MQ=255) ttGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGGAGGCTACCGCAAt > 1:950407/1‑239 (MQ=255) cGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAgggg > 1:1222546/1‑213 (MQ=255) cgcTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAgg > 1:1566833/1‑159 (MQ=255) cgcTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCGTGGGGGGCTGGTGCTTTCCCGTTCCGACAACCCAGCGCGTAACCC‑CCGGTTTTGGC‑TGATGCCTGGTCAGGGCCTGGAGGTACAAAACCCGCAGGAGAAGATTTGGTGGGGGGGGGGAGGGTACCGCAAGAACGAAGAAGTCCGCGGAccg > 2:1687986/1‑237 (MQ=255) cTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGgc > 1:1419893/1‑239 (MQ=255) cTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGGAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCCTGGATGTACAAAACGCGCAGGAGAAGATTGGTCAGGTGGGGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGgc > 1:1226059/1‑239 (MQ=255) aTCCCCCGTGGGCGGGCTGAAATGTCGCGTCTTGGTGGGGCGCTGGGT‑GCCGACCCTGCCCCCTTTATGGGCATGGG‑GGGGTTTGGCGATTTGGTGCTTACCTGTCCCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAgcgcg < 1:1764778/174‑1 (MQ=255) aTCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGGTCTGGTGCTTACCTGTACCGCCAACCAGTCGCGTAACCG‑CC‑GCTTTGGCATGGTGCTCGGGCAGGGCCTGGATTGACAAAGCGCGCAGGGGAAGATTGGTCCGGGGGGGGGAGGCTACCGCAATACCAAAGAAGTCCGCGaaacggggc > 2:536796/1‑231 (MQ=255) ccGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGGCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGGCAGGGGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCt > 1:1531746/1‑239 (MQ=255) ccGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGGGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGGGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCt > 1:1362298/1‑239 (MQ=255) ccGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCGTGGCGGTCTTGGGCCTACCCTTTCCCAAAACCACACGCGTAACCG‑CC‑GCTTTTGCCTGATTCCTGGTCCAGGCCCGGGTGGACCAACTCCGCATGAGAAGAGTGGTGCGGTGGGGGAAGGGTATCGCCAAACGAAAAGAGGCCGCGGACTTgcggctc > 2:193494/1‑232 (MQ=255) tGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGGGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCCTCg > 1:813103/1‑239 (MQ=255) gggtgggctgAAATGTCGCGTTTTGGTGGGGCGTGGGGT‑GCCGCCCCTGCCACTTTTATGGGCAGGGG‑GGGGTTGGGCGTTTTGGTGTTTCCCTGTCCCGAAAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCg < 1:300986/233‑1 (MQ=255) ggctggctGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGGTCTGGGGCTTTCCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GGTTTGGCATGATGCTCGGGCCGGGCCTGGGTGTAAAAAACCGGCCGGggaaga > 2:1764778/1‑174 (MQ=255) ggctggctGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGGGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGc > 1:125080/1‑239 (MQ=255) gctgAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCTGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGGTCTGGGGCTTACCTGTACCGACCACCCGGCGCGTAACCG‑CC‑GTTTTGGCATGGTGCTCGGTCAGGGCATGGATggaaa > 2:295678/1‑148 (MQ=255) gctgAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGGAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGGGAAGATTGGTCAGGGGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGa > 1:1109135/1‑239 (MQ=255) gctgAAAGGCGGCGTTTTGGTGCGGCGCGGGGT‑GCCGACCCTGCCACCTTTAGGGGCATGGG‑GGGGCTTGGCGTTTTGGTGCTTCCCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTg < 1:1687986/238‑1 (MQ=255) cgcgTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGGTGTACa > 1:591386/1‑142 (MQ=255) cgcgTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGGGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATa > 1:55642/1‑239 (MQ=255) gggggcgCGGGGG‑GCCGCCCCTGCCACTTTTAGGGGCAGGGG‑GGGGTTGGGGGTTCTGGTGTTTCCCTGTCCCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGaa < 1:1659917/235‑1 (MQ=255) cggcgCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGGTTGGCGGTCTGGGGCTTACCTGTACCGACAACCAGTCGCGGAACCG‑CC‑CGTTTGGGATGATTGTCGGGCAGGGCATGGGTGTACAAAACGCGCCGGGGAAGATTGGGCAGGGGGGGGGAGGGCACCGCAAAACGAAAGAAGAGCGCGCACTGGGGCATTCGC‑TCGGCCGTGGAATGGCAATAACCGGAGGaatt > 2:793802/1‑237 (MQ=255) gtggggT‑GCCGCCGCTGCCTCCTTTTGGGGGGTGGG‑GGGGTTGGGCGGTCTGGTTCTTTCCTATACGGACACCTACTCGCATAGCCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc < 1:57536/236‑1 (MQ=255) gtggggT‑GCCGCCCCTGCCACTTTTAGGGGCAGGGC‑GGGGCTTGGCGTTTTGGTGCTTCCCTGTCCCGCAACCCAGTCGGGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc < 1:1208426/236‑1 (MQ=255) gcTGGGT‑GCCGCCCCTGCCCCTTTTAGGGGCGGGGG‑GGGGCTGGGCGTTTTGGTTCTTCCCTTTACCGACAACCAGGCGCTTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc < 1:1274593/239‑1 (MQ=255) gcTGGGT‑GCCGCCCCTGCCACCTTTAGGGGCAGGGG‑GGGGGTTGGCGTTTTGGTGCTTACCGGTGCCGACAACCGGTGGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc < 1:1367264/239‑1 (MQ=255) gcTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc > 1:824670/1‑239 (MQ=255) gatGGGT‑GCGGCCCCTGCCCCCTTTGGGGGCATGGG‑GGGGGTTGGCGTTTTGGTGCTTCCCTGTCCCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc < 1:1701499/237‑1 (MQ=255) ttGGGC‑GCCGCCCCTCCCGCCTTTAGGGGCGGGGC‑GGGGCTTGGCGGTGTGGTGTTCACCTGTCCCGACACCCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc < 2:824670/237‑1 (MQ=255) tgggtt‑GCCGCCCCTGCCACCTTTAGGGGGGGGGG‑GGGGGTTGGGGATTTGTTGCTTCCCTGGCCGGAAAACCAGTGGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc < 1:362333/233‑1 (MQ=255) gggggg‑GCCGCCCTTCCCACTTTTAGGGGCAGGGG‑GGGGTTGGGGGTTTTGGTGCTTCCCTGTCCCGACACCCAGGCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc < 1:1713445/236‑1 (MQ=255) ggT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGGTCTGGTGCTTACCTGTACCGACAACCCGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGGGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAAATGGCGCA‑Tc > 1:412052/1‑196 (MQ=255) cGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGGAATTTATCAAGtattat > 1:1245843/1‑239 (MQ=255) cGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGtattat > 1:1665228/1‑239 (MQ=255) cTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGGTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGc > 1:360665/1‑239 (MQ=255) gCCACCTTTATGGGCATGGC‑GGGGCTTTGCGATCTGGTGCTTACCTGTACCCCCAACCAGTCGCGTAACCG‑CC‑GCTTTGGCATGATGCCCGGTCAGGGCCTGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGGGGAAGGCTCACGCCACACGAAAGAAGACCGCGAAATGGCGCA‑TCGCTTCGGTGTTGAAATGCCCAAAAAC‑GAGGAAATTTATCAACTATTATATTGCgg > 2:1188538/1‑239 (MQ=255) ccccttttAGGGGCAGGGG‑GGGGCTGGGGGATCTGGTGCTTCCCTGTCCCGACACCCAGTCGCTTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATa < 1:381659/151‑1 (MQ=255) cTTTATGGGCATGGG‑GGGGCTTGGCGATCTGGTGCTTCCCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc < 1:682456/218‑1 (MQ=255) ttAGGGGCAGGGC‑GGGGCTTGGCGATCTGGTGCTTCCCTGTCCCGACAACCGGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGaa < 2:674856/191‑1 (MQ=255) gCAGGGC‑GGGGCTTGGCGTTCTGGTGCTTCCCTGTACCGACAACCGGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAAcgcgcg < 1:1335845/238‑1 (MQ=255) aTGGC‑GGGGCTTTGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGGCAGGGCATGGATGTACAAAACGCGCAGGGGAAAATTGGTCAGGTGGGGGAAGGCTACCGCAATACGAAAGAAGGCCGCGAACTGGCGCA‑TCGCTTCGGGGTTGAAATGCCAAAAACC‑GAGGAAATTTa > 2:1745107/1‑206 (MQ=255) aTGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATtata > 1:518396/1‑218 (MQ=255) aTGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAACGCGCAGGAGAAGATTGGTCAGGGGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGG‑AAAAACGCGCGCGAg > 1:956926/1‑239 (MQ=255) tGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGaa > 1:242486/1‑128 (MQ=255) ggC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATaa > 1:674856/1‑191 (MQ=255) gggggggCTTGGCGATCGGGTGTTTACCTGTGCCGCAAACGAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAg < 1:495556/235‑1 (MQ=255) ggggggCTTGGTGTTTTGGTCTGTACCTGCAGCGCAACCCAGTGGCTTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAgg < 2:55642/236‑1 (MQ=255) gCTTGGCGTTTTGGTGCTTACCTGTCCCGACACCCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGgcagca < 1:230051/238‑1 (MQ=255) gCTTGGCGTTCTGGTGCTTCCCTGTCCCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGgcagca < 1:793802/238‑1 (MQ=255) tgggttgtgggTTCTTACCTACACCGCAAACCGGTGGCATAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa < 2:1053028/230‑1 (MQ=255) tggctttCTGGTGCTTACCTGTCCCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAGGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa < 1:1262561/233‑1 (MQ=255) tGGGGATCTGGTGTTTCCGTGTACCGAAAACCATGCGGTTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa < 1:708252/239‑1 (MQ=255) tGGCGTTGTGGTGTTTCCCTGTACCGACAACCAGGCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa < 1:1644340/239‑1 (MQ=255) tGGCGTTGTGGTGCTAGCCTGGACCGCCAACCAGCCGCTGACCCG‑CC‑GTGTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGAGTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa < 1:1749392/239‑1 (MQ=255) tGGCGATTTGGTGCTTCCCTGTCCCGAAACCCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa < 1:559323/239‑1 (MQ=255) ggctcttgttgTGCTCACTTGTCCCAACAACCGGTCGCGTACCCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGa < 2:1708743/229‑1 (MQ=255) cTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACt > 1:1785865/1‑239 (MQ=255) gCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACt > 1:462552/1‑234 (MQ=255) gCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTc > 1:294585/1‑239 (MQ=255) cTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGgcagca > 1:399145/1‑222 (MQ=255) tccatGTACCGACAACCAGTCGGGTAGCCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTg < 1:1029739/235‑1 (MQ=255) acgtgtgCCGAAAACCAGGCGGGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGc < 2:1665228/236‑1 (MQ=255) aCCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATtata > 1:968681/1‑191 (MQ=255) aCCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGc > 2:1551232/1‑239 (MQ=255) cggTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGt < 1:1617696/47‑1 (MQ=255) cTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGt > 2:1617696/1‑49 (MQ=255) gTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGc > 1:1614943/1‑239 (MQ=255) tccagACAACCAGGCGCTTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGCa < 1:265352/235‑1 (MQ=255) tACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGCa > 2:1240106/1‑239 (MQ=255) tACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGCa > 1:584180/1‑239 (MQ=255) tACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGCa > 1:1463972/1‑239 (MQ=255) aCAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGTAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATtata > 1:461845/1‑181 (MQ=255) aCAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCtt > 2:1270105/1‑136 (MQ=255) aCAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGaa < 1:740009/146‑1 (MQ=255) aCAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGaa > 2:740009/1‑146 (MQ=255) aCAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc < 1:1756747/171‑1 (MQ=255) aCAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATc > 2:1756747/1‑171 (MQ=255) aCAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAgg > 1:54750/1‑223 (MQ=255) aCAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGCAAGGAc > 1:957772/1‑239 (MQ=255) aCAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGCAAGGAc > 2:1138837/1‑239 (MQ=255) | TTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGT‑GCCGACCCTGCCACCTTTATGGGCATGGC‑GGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCG‑CC‑GTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCA‑TCGCTTCGGCGTTGAAATGCCAATAACC‑GAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGCAAGGAC > NC_007779/3857282‑3857755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |