Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 4,200,347 T→A 100% W321R (TGG→AGG)  rpoA → DNA‑directed RNA polymerase subunit alpha

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077794,200,3470TA100.0% 565.8 / NA 145W321R (TGG→AGG) rpoADNA‑directed RNA polymerase subunit alpha
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (78/67);  total (78/67)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 145 total aligned reads displayed.

AAGAAGAGAAACCAGAGTTCGATCCGATCCTGCTGCGCCCTGTTGACGATCTGGAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACTGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAGCCGCTGATTACTCTTGCCA  >  NC_007779/4200114‑4200582
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                           
                    gatccgatccTGCTGCGCCCTGTTGACGATCTGGAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAACAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACCGTCTCTGGGCATGCGCCTGGAAACCAGGCCACCGGCAAGCACCGCTGACGa                                                                                                                                                                                                                    >  2:668599/1‑239 (MQ=255)
                      tccgatccTGCTGCGCCCTGTTGACGATCTGGAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGt                                                                                                                                                                                                                  <  2:1329173/239‑1 (MQ=255)
                              tgctgcGCCCTGTTGACGATCTGGAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCTACCGGCAAGCATCGCTGACGAGt                                                                                                                                                                                                                  >  2:255161/1‑231 (MQ=255)
                              tgctgcGCCCTGTTGACGATCTGGAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCTACCGGCAAGCATCGCTGACGAGt                                                                                                                                                                                                                  <  1:255161/231‑1 (MQ=255)
                                 tgcGCCCTGTTGACGATCTGGAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCTGATca                                                                                                                                                                                                        <  2:1519871/238‑1 (MQ=255)
                                                  cTGGAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATca                                                                                                                                                                                                        >  1:1040214/1‑221 (MQ=255)
                                                  cTGGAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATca                                                                                                                                                                                                        <  2:1040214/221‑1 (MQ=255)
                                                    ggAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATTTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTgag                                                                                                                                                                                    <  1:388234/239‑1 (MQ=255)
                                                    ggAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTgag                                                                                                                                                                                    >  1:1382709/1‑239 (MQ=255)
                                                     gAAGTGATTGTGCGATCTGCTAACTGCCTTAAAGCTGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCGTACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGAATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTgag                                                                                                                                                                                    <  2:534379/238‑1 (MQ=255)
                                                        ttGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTa                                                                                                                                                                                                 >  2:260106/1‑222 (MQ=255)
                                                           aCTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCt                                                                                                                                                                                                                         <  2:48781/195‑1 (MQ=255)
                                                           aCTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATc                                                                                                                                                                                                         <  1:459319/211‑1 (MQ=255)
                                                           aCTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATa                                                                                                                                                                             >  2:1677309/1‑239 (MQ=255)
                                                                      tGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  <  2:269696/239‑1 (MQ=255)
                                                                       gCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGcc                                                                                                                                                                 <  1:1393499/239‑1 (MQ=255)
                                                                                 ttAAAGCCGAAGCTATCCACTACATCGGTGATCTGGTACAGCGTACCTAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTAGAAAACAGGCCACCGGCAAGCAACGCTGACTAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGTTAAGGTCATGCGCCATCGTAagag                                                                                                                                                       <  2:774466/239‑1 (MQ=255)
                                                                                 ttAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAagag                                                                                                                                                       <  2:901445/239‑1 (MQ=255)
                                                                                        aGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGgtc                                                                                                                                                  <  2:1382709/237‑1 (MQ=255)
                                                                                               aTCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGa                                                                                                                                         >  2:453236/1‑239 (MQ=255)
                                                                                                 ccACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGaa                                                                                                                                        >  1:267069/1‑238 (MQ=255)
                                                                                                     tataTCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCa                                                                                                                                   >  1:414236/1‑239 (MQ=255)
                                                                                                       tatCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATca                                                                                                                                                                                                        <  2:1839238/168‑1 (MQ=255)
                                                                                                       tatCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAAc                                                                                                                                 >  2:533158/1‑239 (MQ=255)
                                                                                                          cGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  <  2:1809912/203‑1 (MQ=255)
                                                                                                          cGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  >  1:1809912/1‑203 (MQ=255)
                                                                                                          cGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAAcagc                                                                                                                              >  1:708798/1‑239 (MQ=255)
                                                                                                            gTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  >  2:582131/1‑201 (MQ=255)
                                                                                                            gTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  <  1:582131/201‑1 (MQ=255)
                                                                                                            gTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAagag                                                                                                                                                       <  1:1394884/212‑1 (MQ=255)
                                                                                                            gTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAAcagca                                                                                                                             >  1:1134177/1‑238 (MQ=255)
                                                                                                              gATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGcc                                                                                                                          <  1:907240/239‑1 (MQ=255)
                                                                                                              gATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGcc                                                                                                                          <  1:1658/239‑1 (MQ=255)
                                                                                                               aTCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCa                                                                                                                         >  1:845887/1‑239 (MQ=255)
                                                                                                               aTCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCa                                                                                                                         >  1:68031/1‑239 (MQ=255)
                                                                                                                    gTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAagag                                                                                                                                                       >  2:1774633/1‑204 (MQ=255)
                                                                                                                    gTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAagag                                                                                                                                                       <  1:1774633/204‑1 (MQ=255)
                                                                                                                       cAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAg                                                                                                                  >  1:148926/1‑238 (MQ=255)
                                                                                                                       cAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAg                                                                                                                  >  1:167203/1‑238 (MQ=255)
                                                                                                                          cGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGGCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTgag                                                                                                                                                                                    <  2:261623/169‑1 (MQ=255)
                                                                                                                          cGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTgag                                                                                                                                                                                    >  1:261623/1‑169 (MQ=255)
                                                                                                                          cGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTgag                                                                                                                                                                                    >  1:261056/1‑169 (MQ=255)
                                                                                                                          cGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  <  2:1145484/187‑1 (MQ=255)
                                                                                                                          cGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  >  1:1794769/1‑187 (MQ=255)
                                                                                                                          cGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTa                                                                                                              >  2:605014/1‑239 (MQ=255)
                                                                                                                          cGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTa                                                                                                              >  1:1576638/1‑239 (MQ=255)
                                                                                                                           gTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCt                                                                                                               <  1:533158/237‑1 (MQ=255)
                                                                                                                            tACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTGCTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATg                                                                                                            >  1:242432/1‑239 (MQ=255)
                                                                                                                            tACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCt                                                                                                                                                                                                                         <  1:296544/130‑1 (MQ=255)
                                                                                                                            tACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCt                                                                                                                                                                                                                         >  2:296544/1‑130 (MQ=255)
                                                                                                                            tACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGCCGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  >  2:1469257/1‑185 (MQ=255)
                                                                                                                            tACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTgag                                                                                                                                                                                    <  2:6339/167‑1 (MQ=255)
                                                                                                                            tACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTgag                                                                                                                                                                                    >  1:6339/1‑167 (MQ=255)
                                                                                                                            tACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATg                                                                                                            >  1:1272305/1‑239 (MQ=255)
                                                                                                                             aCCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATg                                                                                                            <  1:1677309/238‑1 (MQ=255)
                                                                                                                                 aGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAATAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAagag                                                                                                                                                       >  2:341126/1‑191 (MQ=255)
                                                                                                                                    ttGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCaa                                                                                                    >  1:170926/1‑239 (MQ=255)
                                                                                                                                          tCCTTAAAACGCCTAGCCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGCTAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGc                                                                                              <  2:264310/239‑1 (MQ=255)
                                                                                                                                           ccTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCa                                                                                             <  1:746207/239‑1 (MQ=255)
                                                                                                                                            cTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAg                                                                                            <  1:1136649/239‑1 (MQ=255)
                                                                                                                                                 aaCGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGGTc                                                                                        >  1:60991/1‑238 (MQ=255)
                                                                                                                                                      cTAACCTTGGTAAGAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGt                                                                                  <  2:167448/239‑1 (MQ=255)
                                                                                                                                                      cTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  <  1:1304716/159‑1 (MQ=255)
                                                                                                                                                      cTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  >  2:1304716/1‑159 (MQ=255)
                                                                                                                                                      cTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGt                                                                                  >  1:936633/1‑239 (MQ=255)
                                                                                                                                                                 aaaaaaTCTCTTACTGGGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGaa                                                                        <  2:430705/238‑1 (MQ=255)
                                                                                                                                                                   aaaaTCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAatc                                                                     <  1:882320/239‑1 (MQ=255)
                                                                                                                                                                     aaTCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTGCACCGGGTCGTCTCGaaaaact                                                                   >  2:736313/1‑235 (MQ=255)
                                                                                                                                                                         tctTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATTAAATCATCCAg                                                               >  1:1451682/1‑239 (MQ=255)
                                                                                                                                                                         tctTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAg                                                               >  1:890243/1‑239 (MQ=255)
                                                                                                                                                                          ctTACTGAGATTAAAGCCGTGCTTGCTTCCCGTTGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAga                                                              <  2:1018840/239‑1 (MQ=255)
                                                                                                                                                                          ctTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAg                                                               >  1:822145/1‑238 (MQ=255)
                                                                                                                                                                             aCTGAGATTAAAGACGTTCTAGCTGCCCGTCGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGATTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCATCCATCTCCAGGCTATGTTCGGCAATATGGCAGGTTCACTGGt                                                                                  <  2:904943/216‑1 (MQ=255)
                                                                                                                                                                               tGAGATTTAAGACCTGTTGGCTGCCCGTTGACGGTCTCTGGGCATGCGCCTGGAAAACAGGCCAACGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCAGGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCAGCAAGACGAct                                                         <  2:1576638/239‑1 (MQ=255)
                                                                                                                                                                               tGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGAct                                                         <  2:822145/239‑1 (MQ=255)
                                                                                                                                                                                   aTTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATg                                                                                                            >  2:1786345/1‑184 (MQ=255)
                                                                                                                                                                                   aTTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTg                                                      >  1:875194/1‑238 (MQ=255)
                                                                                                                                                                                     tAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCt                                                   <  1:1756875/239‑1 (MQ=255)
                                                                                                                                                                                             tGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGGATCTTCCTAAAACGaa                                           >  2:485008/1‑239 (MQ=255)
                                                                                                                                                                                             tGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGaa                                           >  1:340679/1‑239 (MQ=255)
                                                                                                                                                                                             tGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGGTCACCGGTTTGCCATTAAAACATCAAGAACACACTTGCTAAAACGaa                                           >  2:1131/1‑239 (MQ=255)
                                                                                                                                                                                             tGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGATCACTGGCTCGTCATCAAATCAATACAACGACACTTCCTaaacagaa                                           >  2:154538/1‑234 (MQ=255)
                                                                                                                                                                                                      cccGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTgcg                                  <  2:117262/239‑1 (MQ=255)
                                                                                                                                                                                                        cGTGGACTGTCTCTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTgcgc                                 >  1:461225/1‑238 (MQ=255)
                                                                                                                                                                                                                 tctcTGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTg                       >  1:1206448/1‑239 (MQ=255)
                                                                                                                                                                                                                   tctGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAg                     <  1:1512986/239‑1 (MQ=255)
                                                                                                                                                                                                                   tctGGGCATGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAg                     <  1:736313/239‑1 (MQ=255)
                                                                                                                                                                                                                       ggCATGCGCCTAGAAAACAGACCACCGGCAAGCATGGCTGCAGAGTAACCGGATGACAGGTTAAGGTCTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGATCCGCAACAGCAGCCATCGCCATGCTATGTTCCGCAACATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAGCCg                  <  2:170926/238‑1 (MQ=255)
                                                                                                                                                                                                                           tGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTAc                                                                                                                                                                                        >  2:728443/1‑68 (MQ=255)
                                                                                                                                                                                                                           tGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  >  1:1566263/1‑90 (MQ=255)
                                                                                                                                                                                                                           tGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATgcgc                                                                                                                                                                  <  2:1566263/90‑1 (MQ=255)
                                                                                                                                                                                                                           tGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCAt                                                                                                                                                               <  1:1485313/93‑1 (MQ=255)
                                                                                                                                                                                                                           tGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCAt                                                                                                                                                               >  2:1485313/1‑93 (MQ=255)
                                                                                                                                                                                                                           tGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGGAGTTTAGCCGCTGAt             >  1:1520907/1‑239 (MQ=255)
                                                                                                                                                                                                                           tGCGCCTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGGCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAGCCGCTGAt             >  1:1679664/1‑239 (MQ=255)
                                                                                                                                                                                                                                cTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCGAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAGCCGCTGATTAct         <  2:68031/238‑1 (MQ=255)
                                                                                                                                                                                                                                cTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAGCCGCTGATTAct         <  1:1084563/238‑1 (MQ=255)
                                                                                                                                                                                                                                cTGGAAAACAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAGCCGCTGATTAct         <  1:1077453/238‑1 (MQ=255)
                                                                                                                                                                                                                                     aaaCAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAGCCGCTGATTACTCTTGcc   <  1:605014/239‑1 (MQ=255)
                                                                                                                                                                                                                                      aaCAGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGCTCACCGGGTCGTCACGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGACGCGCCGCGTAGTTGAACCCCTGCTTACTCTTTCCa  >  2:1093243/1‑239 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                           
AAGAAGAGAAACCAGAGTTCGATCCGATCCTGCTGCGCCCTGTTGACGATCTGGAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACTGGCCACCGGCAAGCATCGCTGACGAGTAACCGGATCACAGGTTAAGGTTTTACTGAGAAGGATAAGGTCATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAGCCGCTGATTACTCTTGCCA  >  NC_007779/4200114‑4200582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: