| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 2052854 = | 139 (0.740) | 17 (0.090) | 7/388 | NT | 10.8% | coding (5780/7077 nt) | yeeJ | inverse autotransporter adhesin YeeJ |
| ? | NC_007779 | 2052969 = | 146 (0.800) | coding (5895/7077 nt) | yeeJ | inverse autotransporter adhesin YeeJ | |||||
CAGAGCCGCTTTTTAAGGCGAAGTACACAGTGAGACCTTCGATCAGGTTACCACTGCCATCCTCAACCGTTGCCTTTAAGGTACTTAAATCAGTGTTGGTGGCGGCGATAGTCGATGGATCAGCGATAAAGCTAGCAACATGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_007779/2053093‑2052854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttatCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCATTAACAGCGGTGACCGATCAAAACGGAATCGCGACAACAAGCGTGAAAGGAGCGATGACAGGTAGCGTCACGGTAAGCGCAGTCACGACCGCTGGTGG > NC_007779/2052969‑2053205 CAGAGCCGCTTTTTAAGGCGAAGTACACAGTGAGACCTTCGATCAGGTTACCACTGCCATCCTCAACCGTTGCCTTTAAGGTACTTAAATCAGTGTTGGTGGCGGCGATAGTCGATGGATCAGCGATAAAGCTAGCAACATGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCCCCGTATATTTACCGACTTTA > 2:1874025/1‑239CAGAGCCGCTTTTTAAGGCGAAGTACACAGTGAGACCTTCGATCAGGTTACCACTGCCATCCTCAACCGTTGCCTTTAAGGTACTTAAATCAGTGTTGGTGGCGGCGATAGTCGATGGATCAGCGATAAAGCTAGCAACATGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTA > 2:1762705/1‑239 GGCGATAGTCGATGGATCAGCGATAAAGCTAGCAACATGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTA > 1:173849/1‑136 GGCGATAGTCGATGGATCAGCGATAAAGCTAGCAACATGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTA < 2:173849/136‑1 TGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTTTATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCA > 2:943740/1‑239 TGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATTGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAG > 2:520639/1‑189 TGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATTGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAG < 1:520639/189‑1 TGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGG > 2:1145594/1‑169 TGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGG > 2:279576/1‑169 TGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGG < 2:1776712/169‑1 TGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGG < 1:279576/169‑1 TGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGG > 1:1776712/1‑169 TGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGG < 1:1145594/169‑1 GGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGTTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCAT > 1:938312/1‑239 GGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGG > 1:333207/1‑168 GGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGG < 2:333207/168‑1 GGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCAC > 2:1453959/1‑126 GGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCAC < 1:1453959/126‑1 CGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCATTA < 1:943740/238‑1 GCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGG > 2:107901/1‑161 GCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGG < 1:107901/161‑1 TTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCATTAACAGCGGTGACCGATCAAAACGGAATCGCGACAACAAGCGTGAAAGGAGCGATGACAGGTAGCGTCACGGTAAGCGCAGTCACGACCGCTGGT > 2:1225497/1‑239 TATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGCTGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCATTAAAAGCGGTGACCGATCAAAACGGAATCGCGACAACAAGCGTGAAAGGAGCGATGACAGGTAGCGTCACGGTAAGCGCAGTCACGACCGCTGGTG > 1:732046/1‑239 ATCGCTGTTCCATCGACTTTCGCCGCCCCCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCATTAACAGCGGTGACCGATCAAAACGGAATCGCGACAACAAGCGTGAAAGGAGCGATGACAGGTAGCGTCACGGTAAGCGCAGTCACGACCGCTGGTGG < 2:223605/239‑1 CAGAGCCGCTTTTTAAGGCGAAGTACACAGTGAGACCTTCGATCAGGTTACCACTGCCATCCTCAACCGTTGCCTTTAAGGTACTTAAATCAGTGTTGGTGGCGGCGATAGTCGATGGATCAGCGATAAAGCTAGCAACATGGGCGGTGCTTGAGTTGCCAGTGACTTTCACGGTTGTCTGTGTCTGTATTGTTACGCCGTTATGGAAAGATGCAGTCACCGTATATGTACCGACTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_007779/2053093‑2052854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttatCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCATTAACAGCGGTGACCGATCAAAACGGAATCGCGACAACAAGCGTGAAAGGAGCGATGACAGGTAGCGTCACGGTAAGCGCAGTCACGACCGCTGGTGG > NC_007779/2052969‑2053205 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |