New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 4268802186 (0.990)12 (0.070) 5/386 NT 5.7% coding (899/1416 nt) Y75_RS21135 replicative DNA helicase
?NC_007779 = 4269031 215 (1.190)coding (1128/1416 nt) Y75_RS21135 replicative DNA helicase

GGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_007779/4268561‑4268802
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcacGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAAAATACCCATGGTGCCG  <  NC_007779/4269031‑4268797
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
GGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGG                                                                                                                                                                                                                                                <  1:1458291/239‑1
GGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGG                                                                                                                                                                                                                                                <  1:2083148/239‑1
 GCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGG                                                                                                                                                                                                                                                >  2:2198568/1‑238
   TTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCAC                                                                                                                                                                                                                                             <  2:997495/239‑1
   TTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCAC                                                                                                                                                                                                                                             <  1:1917027/239‑1
           GTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCAC                                                                                                                                                                                                                                             >  2:793312/1‑231
           GTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCAC                                                                                                                                                                                                                                             <  1:793312/231‑1
                                                                            TCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCAC                                                                                                                                                                                                                                             >  1:548134/1‑166
                                                                            TCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCAC                                                                                                                                                                                                                                             <  2:548134/166‑1
                                                                                                  GGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCA                                                                                                                                              >  1:1866195/1‑239
                                                                                                                       CTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTACTCGATCATGACAAGC                                                                                                                          >  2:200843/1‑238
                                                                                                                          GCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGC                                                                                                                                                                                                                                               >  1:1640667/1‑118
                                                                                                                          GCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGC                                                                                                                                                                                                                                               <  2:1640667/118‑1
                                                                                                                                                     GATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGC                                                                                           >  2:865682/1‑239
                                                                                                                                                                                                                              TGGGCGCGCATTTCCTGCACGTTCAGTTCTTTCTCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATGATGATAAGCCTGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCTTTGGCGTCAGGCAGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAA                  <  1:200843/239‑1
                                                                                                                                                                                                                              TGGGCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAA                  <  2:1866195/239‑1
                                                                                                                                                                                                                              TGGGCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAA                  <  2:526007/239‑1
                                                                                                                                                                                                                              TGGGCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAA                  <  2:2067811/239‑1
                                                                                                                                                                                                                              TGGGCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAA                  <  1:865682/239‑1
                                                                                                                                                                                                                              TGGGCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAA                  <  1:858631/239‑1
                                                                                                                                                                                                                              TGGGCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAAGAGTCATCGATATAGATATTGCGTTTTTCGAGCAA                  <  2:616546/239‑1
                                                                                                                                                                                                                                 GCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAA                  >  2:1453125/1‑236
                                                                                                                                                                                                                                 GCGCGCATTTCCGGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAA                  <  1:1453125/236‑1
                                                                                                                                                                                                                                             GGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGCGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAAAATACCCATGGTGCC   >  1:318160/1‑239
                                                                                                                                                                                                                                             GGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGTTAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATTTAGATATTGCGTTTTTCGCGCAATATACCCATGGTGCC   >  1:1847565/1‑239
                                                                                                                                                                                                                                             GGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAAAATACCCATGGTGCC   >  2:148458/1‑239
                                                                                                                                                                                                                                             GGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCG                                                                                                                 <  1:655148/129‑1
                                                                                                                                                                                                                                             GGCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCG                                                                                                                 >  2:655148/1‑129
                                                                                                                                                                                                                                              GCACGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGTGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAAATTACCCATGGTGCCG  >  2:610340/1‑239
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
GGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_007779/4268561‑4268802
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcacGTTCAGTTCTTTCGCCAGTGCTTTCAGCGAGCGAGAGATTTCTGCAATTTCCAGCGTACGGTTATCGGAAAGCGCCGGTACGCGCATCAGTTGCAGGTAGTCGATCATGATAAGCCCGATGCCGCCGTGTTCACGGGCAATACGGCGTGCGCGGGAACGCACTTCCGTTGGCGTCAGGCCGGAGGAGTCATCGATATAGATATTGCGTTTTTCGAGCAAAATACCCATGGTGCCG  <  NC_007779/4269031‑4268797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.