BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 380697	6 (0.030)	29 (0.160)	5/378	NT	83.6%	coding (168/361 nt)	Y75_RS01860	IS3‑like element IS2 family transposase
*	?	NC_007779	= 381063	NA (NA)	29 (0.160)	5/378	NT	83.6%	coding (174/914 nt)	Y75_RS01860	IS3‑like element IS2 family transposase

Only 100 of 148 total aligned reads displayed.

CCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGG  >  NC_007779/380459‑380935

ccAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGAGGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTA                                                                                                                                                                                                                                                >  1:1656632‑M1/1‑239 (MQ=255)

         aTAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGcagccag                                                                                                                                                                                                                                        <  2:567607/238‑1 (MQ=35)

          tAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGTTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCagccagcc                                                                                                                                                                                                                                      <  1:748144/239‑1 (MQ=25)

                    aTTACTAGACTGGCACCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTtct                                                                                                                                                                                                                            <  1:772771/239‑1 (MQ=14)

                                gCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAtacggagaagcacatccgtatcatcagtgtg                                                                                                                                                                                                                 >  1:1598040‑M1/1‑207 (MQ=255)

                                                                         gATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctggg                                                                                                                                                                       >  1:901040‑M1/1‑166 (MQ=255)

                                                                         gATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgag                                                                                                                                                                       >  2:913695‑M1/1‑166 (MQ=255)

                                                                         gATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgag                                                                                                                                                                       >  1:448593‑M1/1‑166 (MQ=255)

                                                                         gATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgag                                                                                                                                                                       >  2:23694‑M1/1‑166 (MQ=255)

                                                                         gATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgag                                                                                                                                                                       >  2:474848‑M1/1‑166 (MQ=255)

                                                                         gATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgag                                                                                                                                                                       >  1:155618‑M1/1‑166 (MQ=255)

                                                                                           ttttAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACTGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaatcacatccgtatcatcagtgtgacgactggggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  1:1511805‑M1/238‑91 (MQ=255)

                                                                                           ttttAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  2:1694237‑M1/238‑91 (MQ=255)

                                                                                           ttttAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  2:1598040‑M1/238‑91 (MQ=255)

                                                                                           ttttAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  2:448593‑M1/238‑91 (MQ=255)

                                                                                           ttttAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccggtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  2:696307‑M1/238‑91 (MQ=255)

                                                                                           ttttAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  1:131567‑M1/238‑91 (MQ=255)

                                                                                           ttttAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  2:1870351‑M1/238‑91 (MQ=255)

                                                                                           ttttAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  1:474848‑M1/238‑91 (MQ=255)

                                                                                           ttttAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  1:23694‑M1/238‑91 (MQ=255)

                                                                                           ttttAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  2:155618‑M1/238‑91 (MQ=255)

                                                                                           tgttagACTAGTCAGTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  1:1614659‑M1/236‑91 (MQ=255)

                                                                                                             agaACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  1:29387‑M1/220‑91 (MQ=255)

                                                                                                             agaACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGATAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      >  2:29387‑M1/1‑130 (MQ=255)

                                                                                                                           atGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      >  1:2220835‑M1/1‑116 (MQ=255)

                                                                                                                           atGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcg                                                                                                                                                      <  2:2220835‑M1/206‑91 (MQ=255)

                                                                                                                                                                                                                                     aCATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatcc                                                                            >  1:1725274‑M1/1‑10 (MQ=255)

                                                                                                                                                                                                                                     aCATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatcc                                                                            <  2:1725274‑M1/174‑165 (MQ=255)

                                                                                                                                                                                                                                     aCATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagctta                                                                                                                  >  2:582102‑M1/1‑10 (MQ=255)

                                                                                                                                                                                                                                     aCATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagctta                                                                                                                  <  1:582102‑M1/136‑127 (MQ=255)

                                                                                                                                                                                                                                      cATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccga          >  2:497898‑M1/1‑9 (MQ=255)

                                                                                                                                                                                                                                      cATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccga          >  1:371274‑M1/1‑9 (MQ=255)

                                                                                                                                                                                                                                      cATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttct                >  2:806848‑M1/1‑9 (MQ=255)

                                                                                                                                                                                                                                      cATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcg                                                                                  <  1:488930‑M1/167‑159 (MQ=255)

                                                                                                                                                                                                                                      cATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataacggcccgtgcgctaaccacttttttgcccgtccatattcaacggcttctttgtggacttctttttccatcgttttcttgccga          >  2:500181‑M1/1‑9 (MQ=255)

                                                                                                                                                                                                                                      cATGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcatctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccga          >  1:836689‑M1/1‑9 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccctccccgggcaataagggcgcgggcgctatccccttttttgcccgtccatattcaacggcttctttgaggggttccttttccatctttttcttgccgagc        >  2:2039344‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctctccactttttttcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagc        >  2:1048988‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccgtattcaacggcttctttgaggagttcattttccatcgttttcttgccgagc        >  1:456166‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcatttttcatcgttttcttgccgagc        >  2:1155954‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagc        >  1:1500019‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagc        <  1:1690869‑M1/239‑233 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagc        >  2:1165211‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagc        >  2:272663‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagc        <  1:1346679‑M1/239‑233 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgag         >  2:1012714‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgag         >  2:1960327‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgcccagc        >  2:1087087‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcatttt                            >  2:521403‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacgg                                                 >  1:1433761‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccata                                                         >  1:1108001‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcc                                                                 <  1:1163995‑M1/182‑176 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccactttttcgcccgtccatatt                                                       >  1:555262‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccg                                                                                                     >  2:2110219‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccg                                                                                                     <  1:627853‑M1/146‑140 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagctta                                                                                                                  <  1:265395‑M1/133‑127 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagctta                                                                                                                  >  2:1632765‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgac                                                                                                                          >  2:71082‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgac                                                                                                                          <  1:71082‑M1/125‑119 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctg                                                                                                                            >  2:2174453‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctg                                                                                                                            <  1:2174453‑M1/123‑117 (MQ=255)

                                                                                                                                                                                                                                        tGGTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgcgcaactgcgcacgcgacacccggagacaacggctgactaagcttacttcccatccccgggcactaagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgag         >  2:917793‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                        ggggttatacggagaaccccacccgtatcacacgtgtgacgactgcggcgcccatccatccagtactcggttcgtttgagaatgaggtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagc        <  2:1611150‑M1/234‑233 (MQ=255)

                                                                                                                                                                                                                                         ggTGTAtacgggaaaccccctccgtatcacaagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaaggacgtgcaactgcgcacgcgacccccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagc        <  2:2109679‑M1/238‑233 (MQ=255)

                                                                                                                                                                                                                                         ggTGTAtacggagaatcacatccgtctcctctgtgtgacggctggggcggccacccacccagtcagcggttcgtcggagaaggacgtgcacctgcgcacgcgacccccggagacaacggctgactaagcttcctccccatccccgggaaaaaagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagc        <  2:1241175‑M1/238‑233 (MQ=255)

                                                                                                                                                                                                                                         ggTGTAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagca       <  1:966838‑M1/239‑234 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcactaagggcgcgtgcgctatccacttttttgcccgtccatattcaaaggcttctttgaggagttcattttccatcgttttcttgccgaccag      >  1:1200305‑M1/1‑5 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcag      >  1:204949‑M1/1‑5 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcag      >  1:906424‑M1/1‑5 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcag      >  1:959583‑M1/1‑5 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacgg                                                 <  1:817575‑M1/196‑192 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcc                                                                 >  2:1449401‑M1/1‑5 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcc                                                                 <  1:1449401‑M1/180‑176 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgc                                                                                       <  1:1812660‑M1/158‑154 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggca                                                                                                 <  2:1758018‑M1/148‑144 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccc                                                                                                       >  2:744316‑M1/1‑5 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccc                                                                                                       <  1:744316‑M1/142‑138 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgacta                                                                                                                        >  2:482821‑M1/1‑5 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaa                                                                                                                                                                     <  1:1733399‑M1/80‑76 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaa                                                                                                                                                                     >  2:1733399‑M1/1‑5 (MQ=255)

                                                                                                                                                                                                                                          gtgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggacatccatcca                                                                                                                                                                                         >  1:513429‑M1/1‑5 (MQ=255)

                                                                                                                                                                                                                                           tgtAtactgagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacaaccggagacaacggctgac                                                                                                                          <  1:1860388‑M1/122‑119 (MQ=255)

                                                                                                                                                                                                                                           tgtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacaaccggagacaacggctgac                                                                                                                          >  2:1860388‑M1/1‑4 (MQ=255)

                                                                                                                                                                                                                                            gtAtacggggaagcacctccgtatcatcggtggggcgcctggggcggccctccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcccgcgacccccggagacaacggctgactaagcttactccccacccccgggcaataagggcgcttgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcagg     <  2:1290106‑M1/238‑236 (MQ=255)

                                                                                                                                                                                                                                            gtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcaggc    >  1:1165551‑M1/1‑3 (MQ=255)

                                                                                                                                                                                                                                            gtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcaggc    >  1:2001053‑M1/1‑3 (MQ=255)

                                                                                                                                                                                                                                            gtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcagg     <  2:52925‑M1/238‑236 (MQ=255)

                                                                                                                                                                                                                                            gtAtacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgag                                       <  1:2144897‑M1/204‑202 (MQ=255)

                                                                                                                                                                                                                                            gtAtacggagaaccacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgccgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttcctccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcagg     <  1:79596‑M1/238‑236 (MQ=255)

                                                                                                                                                                                                                                             tatacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccccttttttgcccgcccattttcaacggcttttttgaggagttcattttccatcgtttttttgccgagcaggc    >  2:1286524‑M1/1‑2 (MQ=255)

                                                                                                                                                                                                                                             tatacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcaggc    >  2:1980735‑M1/1‑2 (MQ=255)

                                                                                                                                                                                                                                             tatacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcaggc    >  1:1176215‑M1/1‑2 (MQ=255)

                                                                                                                                                                                                                                             tatacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcaggc    >  1:1418767‑M1/1‑2 (MQ=255)

                                                                                                                                                                                                                                             tatacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacgg                                                 <  2:238229‑M1/193‑192 (MQ=255)

                                                                                                                                                                                                                                             tatacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacgg                                                 >  1:238229‑M1/1‑2 (MQ=255)

                                                                                                                                                                                                                                             tatacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccacttttttccccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcaggc    >  1:1145379‑M1/1‑2 (MQ=255)

                                                                                                                                                                                                                                             tatacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgggcgctatccacctttttgcccgtccatattcaacgggctctttggggagttcattttccatcgttttcttgccgagcaggc    >  2:367805‑M1/1‑2 (MQ=255)

                                                                                                                                                                                                                                             tatacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggaga                                                                                                                                     <  2:1442123‑M1/109‑108 (MQ=255)

                                                                                                                                                                                                                                              atacggagaagcacttccttatcatcagtgggacgactggggcggccatccatccagtcatcggttcgtctgggaatgccgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccatccccgggcaataagggcgcgtgcgctatccccttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcaggcgc  <  1:1014346‑M1/239‑239 (MQ=255)

                                                                                                                                                                                                                                              atacggagaagcacatccgtatcatcagtgtgacgactgcggcggccatccatccagtcatcggttcgtctgagaatgacgtgcaactgcgcacgcgacacccggagacaacggctgactaagcttactccccacccccgggcaataagggcgcgtgcgctatccacttttttgcccgtccatattcaacggcttctttgaggagttcattttccatcgttttcttgccgagcaggcgc  <  2:1147148‑M1/239‑239 (MQ=255)

CCAGGACGAATAAACGCATAATTACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGG  >  NC_007779/380459‑380935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.