New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 262309860 (0.320)6 (0.030) 5/376 NT 6.1% coding (1399/2067 nt) ppk1 polyphosphate kinase 1
?NC_007779 = 2623955 127 (0.720)coding (185/1542 nt) ppx exopolyphosphatase

GCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACGCGCAGCAAGGGCTGCCCAGTGGTATCACCCTGAAGCTAAATAACCTTGTCGATAAAGGC  >  NC_007779/2622864‑2623331
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                               
gccgcACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCCCACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGCCTTta                                                                                                                                                                                                                                            >  2:1939534/1‑239 (MQ=255)
  cgcACATAACGGTAAGAAAGTCACCGTGGAGGTTGAGTTACAGGCGCGTTTCGAAGAAGAAGCCAACATTAACTGGGCGAAGCGCCTGACCGAAGCAGCCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGCGGTGCGTTATGCACACATCGGGACCGGGCACTTTAACGAAAAAACCGCGCGTCCTtat                                                                                                                                                                                                                                           >  1:355614/1‑238 (MQ=255)
   gcACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATAc                                                                                                                                                                                                                                         <  1:2211986/239‑1 (MQ=255)
     acaTAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTTCAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACt                                                                                                                                                                                                                                        <  2:1655689/238‑1 (MQ=255)
      caTAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGa                                                                                                                                                                                                                                      <  1:1251419/239‑1 (MQ=255)
              tAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGt                                                                                                                                                                                                                              >  2:1442291/1‑239 (MQ=255)
                          cGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGTAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGAccgccg                                                                                                                                                                                                                  >  2:598280/1‑239 (MQ=255)
                            tggtggTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTTCTGACCGCCGAt                                                                                                                                                                                                                >  1:1306040/1‑239 (MQ=255)
                                         aCAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAACCCGCGCGTTTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCa                                                                                                                                                                                                   <  2:1487725/239‑1 (MQ=255)
                                         aCAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCa                                                                                                                                                                                                   <  1:1591226/239‑1 (MQ=255)
                                              cgcgTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACCTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACg                                                                                                                                                                                                <  1:1341319/237‑1 (MQ=255)
                                                cgTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGt                                                                                                                                                                                            >  1:118489/1‑239 (MQ=255)
                                                cgTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGt                                                                                                                                                                                            >  2:1933924/1‑239 (MQ=255)
                                                cgTCTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGt                                                                                                                                                                                            >  1:1488578/1‑239 (MQ=255)
                                                     cgacgaAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAACCTGTTCCTGATTTAACGTAAAGAAAACGGTAAAGTGGTGCGTTATGCCCACATCGGGACCGGGAACTTTAACGAAAAAACCGCCCGTCTTTATACTGCCTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTAcggc                                                                                                                                                                                       <  1:1688914/239‑1 (MQ=255)
                                                     cgacgaAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTAcggc                                                                                                                                                                                       <  1:1442291/239‑1 (MQ=255)
                                                      gacgaAGAAGCCAACATTCACTGTGCAAAGCGCCTGACCGAAGCATGCTTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCTTCTTTATACTGACTATTCGTTGCTGTCCGCCGATGCGCGCATCACCAACGAAGTAcggcg                                                                                                                                                                                     <  1:328040/239‑1 (MQ=255)
                                                        cgaAGAAGCCACCATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACGGTTCCGGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAACCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTAcggcgg                                                                                                                                                                                    <  1:789907/238‑1 (MQ=255)
                                                                       tCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCCCACATCGGGACCGGGAACTTTAACGAAAAACCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTg                                                                                                                                                                 <  1:298069/239‑1 (MQ=255)
                                                                         acggggCGAAGCTCCTGACCGAAGCAGTCGTGCAAGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATGCCACTTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACTGTAAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGaa                                                                                                                                                               <  1:1837143/236‑1 (MQ=255)
                                                                         aCTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACTTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAACCCGCGCGTCTTTATACTGTCTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGaa                                                                                                                                                               <  2:428239/239‑1 (MQ=255)
                                                                         aCTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCtt                                                                                                                                                                                                                                               >  2:1102133/1‑164 (MQ=255)
                                                                         aCTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCtt                                                                                                                                                                                                                                               <  1:1102133/164‑1 (MQ=255)
                                                                             ggCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTAcggc                                                                                                                                                                                       <  1:1644375/215‑1 (MQ=255)
                                                                             ggCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTAcggc                                                                                                                                                                                       >  2:1644375/1‑215 (MQ=255)
                                                                             ggCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGGGTTTAACTTTTTTGaaaaac                                                                                                                                                           >  2:1814212/1‑237 (MQ=255)
                                                                             ggCGAAGCGCCTGACCGAAGCAGGCGTGCACGCTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGCGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTCTTTTTCtttcatcataac                                                                                                                                                            >  1:729295/1‑229 (MQ=255)
                                                                              gCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTGGTTTAATTTTATTGaaacc                                                                                                                                                            >  2:2118528/1‑236 (MQ=255)
                                                                              gCGAACCGCCTGACCGAAGCAGGGGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCCCGCCAAACTGTTCCTGATTTCACTTAAAGAAAACGGTGAAGTGGTGCGTTATGTACACATCGGGACCGGCAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTCTTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGAGTATTTAACTTTATTGaa                                                                                                                                                               <  1:1203157/234‑1 (MQ=255)
                                                                               cGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGGTGTTTAATTTATTTTAAAAcca                                                                                                                                                          >  2:298069/1‑238 (MQ=255)
                                                                                  aGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCCCGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACCCATCGGGACCGGGACCTTTAACGAAAAACCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCTATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATa                                                                                                                                                       <  1:1814212/238‑1 (MQ=255)
                                                                                  aGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGCGGTTTTAAATTTTTTTAATAcccta                                                                                                                                                        >  2:827447/1‑236 (MQ=255)
                                                                                  aGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATa                                                                                                                                                       <  1:1933924/238‑1 (MQ=255)
                                                                                        tGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcacca                                                                                                                                                       >  2:454432‑M1/1‑147 (MQ=255)
                                                                                         gACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAACCGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGCCTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCgg                                                                                                                                               <  1:428626/239‑1 (MQ=255)
                                                                                         gACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGGAGTTAACTTTTTTTTAAACCCAAACCgctcg                                                                                                                                                >  2:1001538/1‑234 (MQ=255)
                                                                                           ccGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatcta                                                                                                                                                   >  2:1310460‑M1/1‑144 (MQ=255)
                                                                                                  aGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCTTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACAttt                                                                                                                                       <  1:1993429/238‑1 (MQ=255)
                                                                                                    gCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGATCTTTAACGAAAAACCCTCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGa                                                                                                                                     <  1:429654/238‑1 (MQ=255)
                                                                                                     cGTGCAGTTTATTTTCTGTGCGCCGGGGTTGAAAATTCACGCCAAGCTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCTTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATGCTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGat                                                                                                                                    <  2:355614/238‑1 (MQ=255)
                                                                                                            gTTATCTTCTCGGCGCCGGGGCTGAAAATTCACGCCAAGCTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTATCTAAAAAACCGCGCGTCTTTAACGTGACTATTCGTGGCTTACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCAt                                                                                                                                                        <  1:138136/211‑1 (MQ=255)
                                                                                                                    ctctGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATcgc                                                                                                                    <  1:993444/239‑1 (MQ=255)
                                                                                                                      ctGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaa                                                                                                                          >  1:1224224‑M1/1‑117 (MQ=255)
                                                                                                                      ctGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTGCTTAAAATTTTTTTATAACCATACCGTcccgg                                                                                                                                              >  2:138136/1‑208 (MQ=255)
                                                                                                                              gggCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGGGTTTTAATTTTTTTTAAAACCAAACCACCCCGTGACATTTTATTTTTTTATTGTATCTCCCCCAAAca                                                                                                          >  2:2212714/1‑237 (MQ=255)
                                                                                                                                 cggAAAATCCACGAAAAACGTTCCCTGATTCACCGTAAAGAAAACGGGAAATGGGTGGTTTAGCCAAAAATCGGGACGGGGAACTTAAACGAAAAACCCGCCGTTTTTAATACTGCTTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTccc                                                                                                       <  2:1722436/236‑1 (MQ=255)
                                                                                                                                     aaattacggCCAACCTGTTCCTGATTTAAGGTAAAAAAAACGTGGAAGGGGTGGGTTATGCACCATTCGGAACCGGGAACTTTAACGAAAAACCCGGGCTTTTTAATACTGACTTTTCGTTGTTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCcgccgc                                                                                                  <  2:729295/231‑1 (MQ=255)
                                                                                                                                     aaaTTCACGCCAAACTGTTCCGGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCcgccgc                                                                                                  <  1:2212714/239‑1 (MQ=255)
                                                                                                                                        ttCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTa                                                                                               <  1:1652742/239‑1 (MQ=255)
                                                                                                                                          cACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccg                                                                                                   <  1:454432‑M1/239‑143 (MQ=255)
                                                                                                                                          cACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccg                                                                                                   <  1:1310460‑M1/239‑143 (MQ=255)
                                                                                                                                           aCGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCt                                                                                                                                                                                                                          >  1:1343169/1‑118 (MQ=255)
                                                                                                                                           aCGCCAAACTGTCCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTTTTTATACTGACTATTCGTTGCt                                                                                                                                                                                                                          <  2:1343169/118‑1 (MQ=255)
                                                                                                                                             gCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGt                                                                                                                                                   <  1:689793/183‑1 (MQ=255)
                                                                                                                                               cAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATTCCCACTTCGGGCCCGGAAACTTTAACAAAAAACCCGCGCGTCTTTATCCTGATTATTCTTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATg                                                                                        <  1:2163687/239‑1 (MQ=255)
                                                                                                                                                      ttCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCcgccgc                                                                                                  <  1:687909/222‑1 (MQ=255)
                                                                                                                                                              ttCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTGTTTTACTTTTTTTTAAAACCCAACACCCCCGTGCGATTTGATTTTTTTTTTTTATAGCCGCAAAAATCCCCCCCCCCATTGTTTTAAAATGTGGAGcgcg                                                                         >  2:1870412/1‑239 (MQ=255)
                                                                                                                                                                cgcGTAAAGAAACCGGTGAAGTGTTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTACGAAATGGTGGACCGCgag                                                                       <  1:1001538/237‑1 (MQ=255)
                                                                                                                                                                             cGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCcgccgc                                                                                                  <  1:1387654/199‑1 (MQ=255)
                                                                                                                                                                              ggTGAAGGGGTGTGTTATGCACACACCGGGACCGGGAACTTTAACAAAAAACCCGGGCGTTTTTATACTGATTTTTCGTTGCTGCCCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACgcgc                                                          <  2:118489/238‑1 (MQ=255)
                                                                                                                                                                                     tggggCGTTATGCCCACATCGGGCCCGGGAACTTTAACGAAAAACCCGCGGGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACGCGCAGCAAggg                                                  <  1:2118528/239‑1 (MQ=255)
                                                                                                                                                                                      ggtgCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccgcagcaaactcctgcggacgaggggatttatcgtgtattggca                                                         <  2:1998370‑M1/237‑185 (MQ=255)
                                                                                                                                                                                      ggtgCGTTATCCACACATCGGGCCCGGGAACTTTACCGAAAAAACCGCGCGTCTTAATACTGCTTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACGCGCAGCAAggg                                                  <  1:827447/238‑1 (MQ=255)
                                                                                                                                                                                            ttATGCACCCATCGGGACAGGGAACTTTAACAAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGCCCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACGCgcagc                                                       <  1:2093040/227‑1 (MQ=255)
                                                                                                                                                                                            ttATCCACACATCGGGACCGGGACCTTTAACGAAAAACCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGa                                                                                                                                     <  1:1481882/150‑1 (MQ=255)
                                                                                                                                                                                             tATGCTCACATCGGGACCGGGACCTTTAACGAAAAAACCGCGCTTTTTTATGCTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACGCGCAGCAAGGGCTGCCCAg                                          <  1:881971/239‑1 (MQ=255)
                                                                                                                                                                                             tATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTg                                                                                                                                                                 <  1:42020/121‑1 (MQ=255)
                                                                                                                                                                                                  acacaTCGGGACCGGGACCTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACGCGCAGCAAGGGCTGCCCAGTGGTa                                     <  1:419756/239‑1 (MQ=255)
                                                                                                                                                                                                      aTCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGGGTTTTACTTTTTTTTAAAAACACACCCCCCCGGGGCAATTTATTTTTTTATTGTTTCTCCGCAAACACCCCCCCCCCCCATGTTTGAAATGGTGGACCGCGAGGTCCGCAACCACCCGCAAGGGGTGCCCACTgggggca                                  >  2:881971/1‑233 (MQ=255)
                                                                                                                                                                                                        cGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGGGTTTTACTTTATTTAAAAACCCAACCCCCCGGTGGCATTTTGTTATTTAATTGTATCGCCGCAAAAACCCCCCCCCCTCTTTTTTGAAAATGGGGACCGCGAGGTAGCCAACCCCCCACCAGGGCTGCCCACGGGTAGCAcc                                >  2:278755/1‑238 (MQ=255)
                                                                                                                                                                                                                     aagaccggtcaaaccgcgcgtcattgcctcttcgcgcaacatagtatctggccccacgccgtccgccacatgcccccgctgtgtcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgttttaaccaagatcgaccgcagcaaactcctgcgtacgaggggatttatcttttattggcatagggttattcaggttgttcgagtgttttgatg                        <  2:1725827‑M1/229‑218 (MQ=255)
                                                                                                                                                                                                                                    gcgcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccgcagcaaactcctgcggacgaggggatttatcgtgtattggcatagggttattcaggttgttcgagtgatttgatgtagtcataaatcgcc         >  2:1796681‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                                    gcgcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccgcagcaaactcctgcggacgaggggatttatcgtgtattggcatagggttattcaggttgttcgagtgatttgatgtagtcataaatcgcc         >  1:1374418‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                                    gcgcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccgcagcaaactcctgcggacgaggggatttatcgtgtattggcatagggttattcaggttgttcgagtgatttgatg                        >  1:827364‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                                    gcgcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccgcagcaaactcctgcggacgaggggatttatcgtgtattggcatagggttattcaggttgttcgagtgatttgatg                        <  2:827364‑M1/224‑218 (MQ=255)
                                                                                                                                                                                                                                    gcgcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccgcagcaaactcctgcgga                                                                                  <  1:796734‑M1/166‑160 (MQ=255)
                                                                                                                                                                                                                                    gcgcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccgcagcaaactcctgcgga                                                                                  >  2:796734‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                                    gcgcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtt                                                                                                                    <  2:448374‑M1/132‑126 (MQ=255)
                                                                                                                                                                                                                                    gcgcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtt                                                                                                                    >  1:448374‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                                    gcgcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccaca                                                                                                                                              <  1:994716‑M1/106‑100 (MQ=255)
                                                                                                                                                                                                                                    gcgcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccaca                                                                                                                                              >  2:994716‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                                      gcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtt                                                                                                                    <  1:63791‑M1/130‑126 (MQ=255)
                                                                                                                                                                                                                                      gcgTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtt                                                                                                                    >  2:63791‑M1/1‑5 (MQ=255)
                                                                                                                                                                                                                                      gcgTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACGCGCAGCAAGGGCTGCCCAGTGGTATCACCCTGAAGCTAAATAACCTTGTCGATAAAGGc  <  1:278755/238‑1 (MQ=255)
                                                                                                                                                                                                                                        gTCattgcctcttcactcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccgcagcaaactcctgcggacgaggggatttatcgtgtattggcatagggttattcaggttgttcgagtgatttgatgtagtcataaatcgccaac      <  2:1374418‑M1/238‑236 (MQ=255)
                                                                                                                                                                                                                                        gTCattgcctctgcacgcaacatattatctggccccaggccgtccgccagatgcacccgctgtttcaggcggccaataatctgcatggcaccatctaccacacgggctatgaccatgtgaaaactgtttgaaccaagatcgaccgcagcaaactcctgcggacgaggggatttatcgtgtattggcatagg                                                     <  2:427683‑M1/191‑189 (MQ=255)
                                                                                                                                                                                                                                          cTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCccgcc                                                                                                    <  1:1854999/136‑1 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                               
GCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACGCGCAGCAAGGGCTGCCCAGTGGTATCACCCTGAAGCTAAATAACCTTGTCGATAAAGGC  >  NC_007779/2622864‑2623331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.