BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	3,859,519	A→C	11.3%	V357G (GTG→GGG)	lldD ←	quinone‑dependent L‑lactate dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	3,859,519	0	A	C	11.3%	380.7 / 2.5	124	V357G (GTG→GGG)	lldD	quinone‑dependent L‑lactate dehydrogenase
Reads supporting (aligned to +/- strand): ref base A (84/21); new base C (3/14); total (87/37)
Fisher's exact test for biased strand distribution p-value = 1.01e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 124 total aligned reads displayed.

GGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGCATCTGCAATAGCAGGCAGTGCACGGGCGGAAGAGAGTACACCGTCCAGCTGGC  >  NC_007779/3859287‑3859756

ggCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACttt                                                                                                                                                                                                                                            <  1:538226/237‑1 (MQ=255)

            aaaaaGAGTGGGGCGTCGTTTCAGAGTGAGGGAGTACATCCGGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGa                                                                                                                                                                                                                              <  2:2106587/239‑1 (MQ=255)

              aaaGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATc                                                                                                                                                                                                                            <  1:90674/239‑1 (MQ=255)

               aaGCGTGCGGTGTCGTTTCAGAGTCAGGGAGTACATACAGCGCAGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGCGCCGCAGGCAACTCTATACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCa                                                                                                                                                                                                                           >  1:1647565/1‑239 (MQ=255)

                agagTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAg                                                                                                                                                                                                                          >  1:1343297/1‑239 (MQ=255)

                    tGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGAttt                                                                                                                                                                                                                      >  1:2106587/1‑239 (MQ=255)

                    tGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGAttt                                                                                                                                                                                                                      >  1:653087/1‑239 (MQ=255)

                    tGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGAGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGAttt                                                                                                                                                                                                                      >  1:683694/1‑239 (MQ=255)

                          gtCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAgg                                                                                                                                                                                                                <  1:1398158/239‑1 (MQ=255)

                          gtCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAg                                                                                                                                                                                                                 <  1:28089/238‑1 (MQ=255)

                           tCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGt                                                                                                                                                                                                               >  1:1848846/1‑239 (MQ=255)

                                       gAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAg                                                                                                                                                                                                                    >  1:1318396/1‑222 (MQ=255)

                                        aGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGa                                                                                                                                                                                                                              <  1:1017838/211‑1 (MQ=255)

                                        aGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGa                                                                                                                                                                                                                              >  2:1017838/1‑211 (MQ=255)

                                              tacatacaGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTgcc                                                                                                                                                                                            >  1:1744471/1‑236 (MQ=255)

                                                catacaGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGccc                                                                                                                                                                                          >  1:651434/1‑238 (MQ=255)

                                                     aGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGATAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCCAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCCCTCTCATCTCTTTTTCGATCAGTTTTAGCAGGTT‑ACCTACACCCGCCTGGCCCGCTGtt                                                                                                                                                                                    >  2:895308/1‑239 (MQ=255)

                                                      gcgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATc                                                                                                                                                                                                                            <  1:2010317/199‑1 (MQ=255)

                                                      gcgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATc                                                                                                                                                                                                                            >  2:2010317/1‑199 (MQ=255)

                                                      gcgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAgg                                                                                                                                                                                                                <  2:371098/211‑1 (MQ=255)

                                                      gcgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAgg                                                                                                                                                                                                                >  1:371098/1‑211 (MQ=255)

                                                      gcgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGCCCCGCTGtt                                                                                                                                                                                    >  1:1575699/1‑238 (MQ=255)

                                                      gcgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGCCCCGCTGtt                                                                                                                                                                                    >  1:2161928/1‑238 (MQ=255)

                                                      gcgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGCCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGCCCCGCTGtt                                                                                                                                                                                    >  1:1396958/1‑238 (MQ=255)

                                                       cgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCCGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTg                                                                                                                                                                                   >  1:1108858/1‑238 (MQ=255)

                                                       cgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGa                                                                                                                                                                                                                              <  2:1520720/196‑1 (MQ=255)

                                                       cgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTg                                                                                                                                                                                   >  2:1992224/1‑238 (MQ=255)

                                                       cgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTg                                                                                                                                                                                   >  2:1596273/1‑238 (MQ=255)

                                                       cgcCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTg                                                                                                                                                                                   >  1:1604829/1‑238 (MQ=255)

                                                            aaCGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAgc                                                                                                                                                                              >  1:1149629/1‑238 (MQ=255)

                                                            aaCGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAgc                                                                                                                                                                              >  1:576480/1‑238 (MQ=255)

                                                                taacccTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGCCCCGCTGTTGCCAGCGCAt                                                                                                                                                                          >  2:1032538/4‑238 (MQ=255)

                                                                 tCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATAc                                                                                                                                                                        >  2:827565/1‑239 (MQ=255)

                                                                 tCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATAc                                                                                                                                                                        >  2:660197/1‑239 (MQ=255)

                                                                        tcCCTCAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGaaa                                                                                                                                                                  >  1:1955534/1‑238 (MQ=255)

                                                                         cccgggggggGAGGGTTAGGGGGGGGGGGCGACAAC‑CAATTAGCCCCCATCCCCTTTC‑CCATGGGGGGCCGGGCCCGCGGCCAACTCTTTCCCCGCCCCCGGCCCCAGCGAATCTTGCGTATTTTCGCTGTTCGTTTCCGCGCCAGTCAGCGTCACCCCCCCTTTCACCTCTTTTTCGACAAGATTTAGCAGGTT‑AGCTACCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAg                                                                                                                                                                 <  2:540426/233‑1 (MQ=255)

                                                                         cccTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGc                                                                                                                                                                >  1:1909529/1‑239 (MQ=255)

                                                                          ccggggggAGGGGGTGGGGGGGGGGGGCCC‑CAAC‑CGACTATCCCCCTTCCCCTTCCGCCAT‑GGGAGCCGGTGCCGCAGGCACCTCTTTCCCCACCCCCTGCCCCGGCGAATCTTGCGTATTTTCGCTGATCGTTTTCGCGCCAGTCAGCTTCACCGCCCCTTTCATCTCTTTTTCGATCAGATTTAGCAGTTT‑AGCTCCCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCa                                                                                                                                                               <  2:924157/234‑1 (MQ=255)

                                                                             gAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACg                                                                                                                                                             >  2:2138643/1‑238 (MQ=255)

                                                                              aGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGa                                                                                                                                                            >  1:466617/1‑238 (MQ=255)

                                                                               gggAGAGGGTTAGGGTGAGGGGGCG‑CCAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGCCCCGCTGTTGCCATCGCATACAAGACAGCActgt                                                                                                                                                           >  1:1625846/1‑235 (MQ=255)

                                                                                ggAGGGGGGTGGGGGGGGGGGGCG‑CAAA‑CGACTTGGCCGAGTTCCTTGTCGAGGT‑GGGGGCGGGGGGCGGGGGAAACTTTTTCCCCGGCCCGCGCACCGGGGGATTTTGCGTATTTTGGCTGATGGTTTTCGGGCCAGTCAGCGTCATCGCCCCTTCCATCTTTTTGTCGATAAGATTTGGCGGGTT‑AGCTACCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGAcc                                                                                                                                                          <  2:1831808/238‑1 (MQ=255)

                                                                                  agagGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCca                                                                                                                                                        >  1:540426/1‑238 (MQ=255)

                                                                                  agagGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTGCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCca                                                                                                                                                        >  1:1878016/1‑238 (MQ=255)

                                                                                    agGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATc                                                                                                                                                                                                                            >  1:1683967/1‑169 (MQ=255)

                                                                                    agGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATc                                                                                                                                                                                                                            <  2:1683967/169‑1 (MQ=255)

                                                                                    agGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCcagca                                                                                                                                                     >  1:14651/1‑239 (MQ=255)

                                                                                    agGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCcagca                                                                                                                                                     >  2:707209/1‑239 (MQ=255)

                                                                                         ttgggggcgggggCC‑CAAACCGCCTACCCCGCTTCCCCTTCCGCCGT‑GGGCGCCGGTGCCCAGGGCTACTTTTTCCCCACCCCCTCCACCGGAGAATCTTCCGTATTTTCGCTATTCGATTCCGCGCCGGCCGGCGTAACCGCCCCTTTCATCTCTTTTTCGACAAAATTTGGCAGGTA‑AGCTCCCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTAc                                                                                                                                                 <  2:1909529/231‑1 (MQ=255)

                                                                                         ggggggggggggcCC‑CAAC‑CGACTTTCCCGCATCCCCTTCCCCCAG‑GGGGGCAGGTGCCGCAGGCACTTCTTTACCCCCCCCCTCCCCCAGCAAATCTTGCTTATTTTCGCTGATCGTTTTCGCGCCAGTCAGCGTCACCGCCTCTTTCATCTCTTTTGCGATCAGATTAAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTAc                                                                                                                                                 <  2:1744471/230‑1 (MQ=255)

                                                                                                aGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCAt                                                                                                                                                                                                                                         >  2:1058543/1‑144 (MQ=255)

                                                                                                aGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCAt                                                                                                                                                                                                                                         <  1:1058543/144‑1 (MQ=255)

                                                                                                aGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCg                                                                                                                                          >  2:1813261/1‑238 (MQ=255)

                                                                                                aGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCCCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCg                                                                                                                                          >  1:248332/1‑238 (MQ=255)

                                                                                                 gggggCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGa                                                                                                                                                                                                                              <  1:1532872/154‑1 (MQ=255)

                                                                                                 gggggCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGa                                                                                                                                                                                                                              >  2:1532872/1‑154 (MQ=255)

                                                                                                  ggggCG‑AAAA‑CGACTCTGCCCTACCCGCTTCGCCCGG‑GGGAGCCGGGGCCGAAGGCAACTTTTTCCCCCGCCCCTGCACCGGCGATTCTTGCTGATTTCCGCTGATGTTTTCCGCCCCAGTAAGGGTCCTCGCCTCTTTCTTCTCTTTTTCGACCAGATTTAGCAGGTT‑AGCACCCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGttggttca                                                                                                                                        <  2:1343297/238‑6 (MQ=255)

                                                                                                      cg‑cAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGa                                                                                                                                   >  1:447121/1‑239 (MQ=255)

                                                                                                         cAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCATGACCCAGCAGCACGGTGTCGGCACCGAgc                                                                                                                                 >  1:1712520/1‑239 (MQ=255)

                                                                                                          aaa‑CGACTTTCCCGCATCCCTTTTCGCCAG‑GGGGGCATGTGACGCAGGCAACTTTTACCCCACCCCCTGCCCCAGCAAATTTTGCTAATTTTCGCTGATCGATTTCGCGCCGGTCAGATTACTCCCCATTTTCATCTCTTTTTCGACAAGATTTAGCAGGTG‑AGTGCCACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAgcg                                                                                                                                <  2:1442733/239‑1 (MQ=255)

                                                                                                                    tGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGCGCGCAATCATAc                                                                                                                       >  1:28134/1‑239 (MQ=255)

                                                                                                                     gCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCtttt                                                                                                                                                                                                                                  <  2:969659/132‑1 (MQ=255)

                                                                                                                     gCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCtttt                                                                                                                                                                                                                                  >  1:969659/1‑132 (MQ=255)

                                                                                                                     gCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCGGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATAc                                                                                                                       >  1:1207611/1‑238 (MQ=255)

                                                                                                                     gCCGCATTCCCTTTCGCCAT‑GGGAGCCAGCGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCGGATCGATTTCGCGCCAGTCAGCCTCATCGCCCCTTGCATCTCTTTTTCGATCAGATTTAGCAGGt                                                                                                                                                                                                               >  1:1214216/1‑151 (MQ=255)

                                                                                                                         ccttCCCTTTCGCCGG‑GGGAGCCGTTGCCCGTGGCCCTTATTTCCCCATCCCCGCCACCCGCTAGTCTTGCTTTATTTCTGTGTCGGATTCCGCCCCTGTCGGGGCCGTCCCCACTTTCTTCTTTTTTTCAATCA‑ATTTAGGAAGTTAACCTCCCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACg                                                                                                                  <  2:248332/237‑1 (MQ=255)

                                                                                                                         cATTCCCTTTCGCCAT‑GGGAGACAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCa                                                                                                                                                               >  1:976696/1‑194 (MQ=255)

                                                                                                                           ttCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGAc                                                                                                                >  2:710987/1‑239 (MQ=255)

                                                                                                                           ttCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATAAAAGAAAGCACGACCCAGCAGCACGGTGTCGGCACCGCGCGCAATAATACGcaccac                                                                                                                >  1:1025679/1‑239 (MQ=255)

                                                                                                                              ccTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGCATCTTGCGTAATTTCGCTGCTCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGAACGACATc                                                                                                             >  1:882873/1‑239 (MQ=255)

                                                                                                                              ccTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACgg                                                                                                                                               >  1:359098/1‑205 (MQ=255)

                                                                                                                                   cGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCTGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGCCACCGAGCGCAATCATACGCCCGACATCAAGc                                                                                                         >  1:937782/1‑238 (MQ=255)

                                                                                                                                        t‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAg                                                                                                                                  >  1:1531280/1‑208 (MQ=255)

                                                                                                                                          gggAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGCCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTAc                                                                                                  >  1:192051/1‑239 (MQ=255)

                                                                                                                                             ggcaggggCCGCAGGCACCTCTTCCCCCCCCCCCTCCCCCGGCGATTTTTGCGTATTTTCGTTGTTCGTTTCCGCGCCAGCCAGCGCCACCGCCCCTTTCTTCTCTTTTCCGACCAGATTTAGCGGGTT‑AGCTACCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGa                                                                                                <  2:447121/231‑1 (MQ=255)

                                                                                                                                              ccccgTGCCGGAGGCACCTTTTCCCCCCGCCCCTCCCCCAGAGAATCTTGCTTAATTTCTCTGTTCGATTTCGCGCCAGTCAGCGTCATCCCCACTTTCATCTCTTTTTCGACCAGATTTAGCAGGTT‑AGCTACCCCCGCCTGGCCCGCTGTTGCCAGCGCa                                                                                                                                                                           <  2:558603/158‑1 (MQ=255)

                                                                                                                                                 aGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAg                                                                                                                                                                 >  1:841727/1‑169 (MQ=255)

                                                                                                                                                   tGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGCCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTcc                                                                                           >  1:1312105/1‑237 (MQ=255)

                                                                                                                                                     ccGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGTCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCt                                                                                        >  1:656182/1‑238 (MQ=255)

                                                                                                                                                        cAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAg                                                                                                                                                                 >  1:558603/1‑162 (MQ=255)

                                                                                                                                                                          gCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATc                                                                   >  1:205178/1‑238 (MQ=255)

                                                                                                                                                                          gCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATc                                                                   >  2:1157762/1‑238 (MQ=255)

                                                                                                                                                                          gCCCCCGCACTAGCGAATCTTGCGTACTTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTCGCCAGCGCATACAAGAAAGCACGCCCCAGCAGTACGGTGTCCGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGACTGGCta                                                                       >  1:913034/1‑234 (MQ=255)

                                                                                                                                                                              cTGCACCAGCGAATCTTGCGTAATTTCGATGATCGATTTCGCGCCAGTCAGCGTCATCGACACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCtt                                                              >  1:2086231/1‑239 (MQ=255)

                                                                                                                                                                                gCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGCATGGCTATATCACCTTTc                                                            >  1:1831844/1‑239 (MQ=255)

                                                                                                                                                                                   ccAGCAAATTTTGCTTATTTTCGTTATTCGTTTTCGGCCCGGCGAGGTTCATCCCCCCTTTCATCTCTTTTTCGATCAGATTTAGCAGTTA‑AGCTCCCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCAcc                                                         <  2:1025679/239‑1 (MQ=255)

                                                                                                                                                                                     aGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGc                                                       >  1:711581/1‑239 (MQ=255)

                                                                                                                                                                                      gCGAATCTTGCGTATTTTCGCTTTTCGTTTTCGCGCCAGTCGGCGTCATCCCCCCTTTCATCTCTTTTTCGACCAGATTTAGCAGGTA‑AGCTCCCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGa                                                                                                                                                            <  2:757323/137‑1 (MQ=255)

                                                                                                                                                                                       cGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCCCCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTatat                                                                    >  1:705644/1‑224 (MQ=255)

                                                                                                                                                                                        gAATCTTGCTTATTTGCGCTGATCGTTTTCGCGCCGGTCAGGGTCATCGCCCCTTTCATCTCTTTTCCGATCAGATTTAGCGGGTT‑AGCTACCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGc                                                       <  1:1517317/236‑1 (MQ=255)

                                                                                                                                                                                         aaTCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGCAt                                                     >  1:1218386/1‑237 (MQ=255)

                                                                                                                                                                                          aTCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGCATCTg                                                  <  1:1431807/239‑1 (MQ=255)

                                                                                                                                                                                                cGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTa                                                                                                                                                  >  1:757323/1‑137 (MQ=255)

                                                                                                                                                                                                cGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGCATCTGCAATa                                             >  1:764861/1‑238 (MQ=255)

                                                                                                                                                                                                          cTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGCAt                                                     >  1:1623816/1‑220 (MQ=255)

                                                                                                                                                                                                            agtCGATTCCGCGCCGGTCAGCGTCACCGCCCCTTTCATCTTTTTTGCGAGCAGATTTAACGGGTT‑AGCTACCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGCATCTGCAATAGCAGGCAGTGCAc                                <  1:2062333/237‑1 (MQ=255)

                                                                                                                                                                                                                   tcggggcCAGTCAGCGTCTCCCCCCTTTTCACCTCTTTTGGGTCCAGATTGGGAAGGTT‑ACCTACCCCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGCATCTGCAATAGCAGGCAGTGCACGGGCGGa                         <  2:711581/234‑1 (MQ=255)

                                                                                                                                                                                                                     cgcgCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCt                                                               >  1:1460580/1‑199 (MQ=255)

                                                                                                                                                                                                                                 cGTCATCGCCACTTTCATCTCTTTTTCGATCAGATCTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGCATCTGCAATAGCAGGCAGTGCACGGGCGGAAGAGAGTACACCg            >  2:589567/1‑238 (MQ=255)

                                                                                                                                                                                                                                      tCGCCCCTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGCATc                                                    <  1:766810/193‑1 (MQ=255)

GGCGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCG‑CAAA‑CGACTATGCCGCATTCCCTTTCGCCAT‑GGGAGCCAGTGCCGCAGGCAACTCTTTACCCAGCCCCTGCACCAGCGAATCTTGCGTAATTTCGCTGATCGATTTCGCGCCAGTCAGCGTCATCGCCACTTTCATCTCTTTTTCGATCAGATTTAGCAGGTT‑AGCTACACCCGCCTGGCCCGCTGTTGCCAGCGCATACAAGAAAGCACGACCCAGCAGTACGGTGTCGGCACCGAGCGCAATCATACGCACGACATCAAGCCCGTTACGAATTCCGCTATCCGCCAGAATGGCTATATCACCTTTCACCGCATCTGCAATAGCAGGCAGTGCACGGGCGGAAGAGAGTACACCGTCCAGCTGGC  >  NC_007779/3859287‑3859756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`