BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	4,492,872	C→G	16.1%	A292G (GCG→GGG)	lptG →	LPS export ABC transporter permease LptG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	4,492,872	0	C	G	16.1%	289.4 / 13.8	112	A292G (GCG→GGG)	lptG	LPS export ABC transporter permease LptG
Reads supporting (aligned to +/- strand): ref base C (15/78); new base G (17/2); total (32/80)
Fisher's exact test for biased strand distribution p-value = 1.30e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 114 total aligned reads displayed.

AATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGC  >  NC_007779/4492643‑4493109

aaTCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCGGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGtt                                                                                                                                                                                                                                              <  1:920870/239‑1 (MQ=255)

 aTCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTc                                                                                                                                                                                                                                             <  2:1636788/239‑1 (MQ=255)

 aTCCGAAACAGATTACCGGTCCGCAGACGGTGAGCGGCACCTGGAAAACCAACCCCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTc                                                                                                                                                                                                                                             <  2:2051290/239‑1 (MQ=255)

  tCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGGGATGATGATTGTGGCGCTGTCCTTcg                                                                                                                                                                                                                                            >  2:1945962/1‑238 (MQ=255)

             ttACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGcc                                                                                                                                                                                                                                   <  1:51301/237‑1 (MQ=255)

             ttACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGc                                                                                                                                                                                                                                    <  2:728921/236‑1 (MQ=255)

                ccGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGAGGGTGCTGATGGGGCGTGCGTTCCTCtttttcccccc                                                                                                                                                                                                                               >  2:1762547/1‑230 (MQ=255)

                  ggTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGCTCATCTTTGGCCCACTgcg                                                                                                                                                                                                                            <  1:2018560/239‑1 (MQ=255)

                  ggTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATATGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTgcg                                                                                                                                                                                                                            <  1:1139762/239‑1 (MQ=255)

                   gTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTAAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTgcg                                                                                                                                                                                                                            <  2:875008/238‑1 (MQ=255)

                   gTTCGAAGGCGGGGGGCGGCACCTGGAAACCCATCCTCACGCGGGAAAAACGGGGCGGGGTGGCGCTGGACCCGGATGCACTGTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGGGGTCAGGATGCCGGACGTTAGCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTgcg                                                                                                                                                                                                                            <  2:1623592/238‑1 (MQ=255)

                    ttCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGGTTATGGCGCTGTCGTTCATCTTTTGCCCACcgcgga                                                                                                                                                                                                                          >  1:612925/1‑237 (MQ=255)

                      cGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTgcgtagc                                                                                                                                                                                                                        <  2:2005276/239‑1 (MQ=255)

                      cGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGGGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGAGGCTGGAGGGGCGGTCGTTCCTCTTTTGTCCACCgcgtagc                                                                                                                                                                                                                        >  1:673036/1‑239 (MQ=255)

                             ggTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCg                                                                                                                                                                                                                  <  1:659920/238‑1 (MQ=255)

                                  gCGGCACCTGGAAAACCAACCTCCCGCCGGACAAACGGGGGGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATggg                                                                                                                                                                                                             <  2:791820/238‑1 (MQ=255)

                                  gCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGTAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATggg                                                                                                                                                                                                             <  2:50536/238‑1 (MQ=255)

                                  gCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACTTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATggg                                                                                                                                                                                                             <  1:418316/238‑1 (MQ=255)

                                      cACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGgcgtg                                                                                                                                                                                                         <  1:1060471/238‑1 (MQ=255)

                                       aCCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGTATGCGCTGTCGTTCGTCTTTTGCCCACTGCGCAGCGGCCCGATGggcgggcg                                                                                                                                                                                                       >  2:471267/1‑239 (MQ=255)

                                         cgggAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCGGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACGATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTTATGATGCTGATGGCGCTGTCGtt                                                                                                                                                                                                                                              <  1:1139270/196‑1 (MQ=255)

                                             aaaaCCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCGGAAGTGGAGCGGTCAGGATGCCGGGCGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGAGGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTgg                                                                                                                                                                                                  <  1:1275701/238‑1 (MQ=255)

                                               aaccaaccTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGGGCGGTCAGGATGCCGGACGTTAGCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑ct                                                                                                                                                                                              <  2:9703/239‑2 (MQ=255)

                                                   aaccTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGAATCGGATGGGGCTGGCGTTCATCTTTTGCCCACCGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑GCCCgg                                                                                                                                                                                          >  2:2004848/1‑239 (MQ=255)

                                                                 cAAACTGGGCGTGGTGGCGCTGGCCCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGtt                                                                                                                                                                          <  1:1762547/239‑1 (MQ=255)

                                                                  aaaCTGGGCGTGGTGGCGTTGGACCCGGATGCCCTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGttt                                                                                                                                                                         <  1:826457/239‑1 (MQ=255)

                                                                     ctgggctgtgtggCCCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCTCAACTATGTGAATTATCTGAAGTCGAGCTGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGt                                                                                                                                                                      <  1:388459/230‑1 (MQ=255)

                                                                     cTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAATTCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTTGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGt                                                                                                                                                                      <  1:2268890/239‑1 (MQ=255)

                                                                      tGGGGGTGGTGGCGCTGGACCAGGATGCACGCCCTATCGGCGGTTTGCACAACTATGTGAAGTATCGGAAGTCGGGCGGTCAGGATGCCGGACTTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGt                                                                                                                                                                      <  2:1236382/238‑1 (MQ=255)

                                                                      tGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGtc                                                                                                                                                                     <  1:1059636/239‑1 (MQ=255)

                                                                         gCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGGGGATGCCGGTGGGGCGGTCGTTGTTCTTTTGCCCCCTGCGTGGCGGACCCATGGGCGGGGGGGGGGT‑CCCCGGGGT‑CA‑TTTTCGGTTTTGtct                                                                                                                                                                    >  2:875930/1‑237 (MQ=255)

                                                                         gCGGGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGtctt                                                                                                                                                                   <  2:874977/238‑1 (MQ=255)

                                                                           gtggtgGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGtcttct                                                                                                                                                                 <  1:116481/238‑1 (MQ=255)

                                                                           gtggtgGCGATGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTa                                                                                                                                                                <  1:2208814/239‑1 (MQ=255)

                                                                                ggCGCTGGACCCGGATGCACTCTCTATCAGCAGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTAc                                                                                                                                                           <  1:1945962/239‑1 (MQ=255)

                                                                                         cccGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAg                                                                                                                                                   <  2:1424345/238‑1 (MQ=255)

                                                                                               tccACTCTCTGGCAGGGGTTTGCCCAACTATGTGAAGTATCTGAAGCCGGGCGGCCAGGATTCGGCACGTTATCAGCTCAACATGTTGAGCAATATCTGCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTc                                                                                                                                             <  2:842822/236‑1 (MQ=255)

                                                                                               tGCACTCTCTATCAGCGGTTTGAACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGtttt                                                                                                                                                                        <  1:1033671/211‑1 (MQ=255)

                                                                                                    tctctATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGGTGATGCTGATGGGGCTGTCGTTCCTCCTTTGCCCCCCGCGGAGGGTAACCAGGGGGGTGCGTGGGGG‑TACTGGGAT‑CAGGTTTGGGTTTTTTTTTTTTC‑TACTGGGCCAggtatatggccc                                                                                                                                        >  2:726919/1‑227 (MQ=255)

                                                                                                    tctctATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGtt                                                                                                                                                                          <  1:1766374/204‑1 (MQ=255)

                                                                                                      tctATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTGTCAGCTCAACATGTGGAGCAAAATTTTCCAGCCTCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑Ct                                                                                                                                   <  1:2229421/239‑1 (MQ=255)

                                                                                                      tctATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCa                                                                                                                                                                                                                                 <  1:1655530/150‑1 (MQ=255)

                                                                                                        tATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGGGCTGTCGTTCTTCTTTTGGCCCCCGCGTAGCGGACCGATGGGGGGGGGGGTGGT‑TCCCGGTGT‑TA‑GGTTTGGGTTTTTCTTTTTCCGACGTGACCAGAACCTC‑GGGCGG‑CTgg                                                                                                                                 >  2:48779/1‑238 (MQ=255)

                                                                                                          tCAGCGGTTTGCACAATTAGGTGAAGTATCGGAAGTCGGGCGTTCAGGATGCCGGCGGTTATCAGCTAAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑g                                                                                                                              <  2:492045/239‑1 (MQ=255)

                                                                                                          tCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑g                                                                                                                              <  2:480442/239‑1 (MQ=255)

                                                                                                          tCAGCGGTTTGCACAACTATGTGAAGTATCGGAAGGCGAGCGGTCAGGATGCCGGACGGTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑g                                                                                                                              <  1:306648/239‑1 (MQ=255)

                                                                                                              cGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGGTTATGCTGATTGGGGTTTCGTTTATCTTTTGGCCCCTGCGTAGCGGACCCATGGGGGGGCGGGTGGT‑GACCCGGAT‑TC‑TGTTCGGTTTTGTCCTTTACGTGCTGGGCCAGAGCTTCGGGCCCG‑CTG‑C‑GTTgg                                                                                                                          >  2:1792947/1‑239 (MQ=255)

                                                                                                              cGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGAGGGCGCTGTTGTTCCTCTTTTGCCCACCGCGTAGCGTACCGGTGGGCGGGGGTGTGGT‑CCCCGGTAT‑CC‑GTTTCGGGTTTGTTTTCTCCGTACTGGGGCCGAGCTTC‑GGCCCC‑CCGGC‑GTTgg                                                                                                                          >  2:773294/1‑239 (MQ=255)

                                                                                                                gTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCGGACGGGGCTGTCGTTCCTCTTTTGGCCACTGCGGAGCGGAACGATGGGCGTGCGGGTGGT‑ATCCCGTGT‑CA‑GTTTCGGTTTTTTCTTCTGCGGAATGGGGCCAATCTTC‑TGCGCG‑CTgctgtttggt                                                                                                                         >  1:1844470/1‑230 (MQ=255)

                                                                                                                  ttGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGGGAAGAAGCCTATGGGGCTGTCGTTCCTCTTTTGCCCCCCGGGGGGCGTGCCGACGGGGGGGCGGGTGGG‑CTCCGGTAT‑CA‑CGTTTGGTTTTTTTTTCTCCGTACTTGGCCCGATCTTC‑CGGCCG‑CTggccgtgtgttt                                                                                                                       >  2:476890/1‑228 (MQ=255)

                                                                                                                   tGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCg                                                                                                                                                                                                                  <  1:1596361/152‑1 (MQ=255)

                                                                                                                   tGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTa                                                                                                                                                            <  1:1108122/203‑1 (MQ=255)

                                                                                                                   tGCACAACTATGGGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACTTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGtt                                                                                                                                                                          <  1:1987084/189‑1 (MQ=255)

                                                                                                                                gAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTAc                                                                                                                                                           <  1:1266049/191‑1 (MQ=255)

                                                                                                                                 aattATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGgcgtgcgt                                                                                                                                                                                                      <  1:1808995/147‑1 (MQ=255)

                                                                                                                                 aaGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGtcttct                                                                                                                                                                 <  1:614064/184‑1 (MQ=255)

                                                                                                                                    tATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCCTTCATCTTTTTCCCCCCGCGTAGCGGACCGATGGGGGTGCGTGGGGT‑CACCGGGAT‑CA‑GTTTCGGGTTTGTCTTTTACGTACTTGGGCAGATCTTT‑CGCCCC‑CCGAC‑GGTTGGTTGTTGCATcccccccaccc                                                                                                     >  2:1749307/1‑233 (MQ=255)

                                                                                                                                      tcggAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTTGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTgg                                                                                                                                                        <  1:949793/185‑1 (MQ=255)

                                                                                                                                      tCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGCGGTGAAGGTGGTGGGGCATGCGGTCCTCTTTTGCCCACTGCCTGGCGTACCCCTGGGGGTGCCGGTGGG‑CCCCCGGATGCG‑GTTTGGGTTTT‑TCTTTCTCGGACTTGAGCAGATCTTCTGGCCGG‑CGTGG‑GTTGGTTT‑TGGCcgcccgcccacccccc                                                                                                  >  2:2017401/1‑231 (MQ=255)

                                                                                                                                             tCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGtc                                                                                                                                                                     <  1:21503/168‑1 (MQ=255)

                                                                                                                                                aGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGGTGCTGGTGGGGCTTTCGTTTATCTTTTGGCCACCGCGGAGCGTACCGCAGGGCGGGCGGGTGGT‑CGCCGGGAT‑CC‑GTTTTGGTTTTGTCTTCTTCGTTCTGGCTCAGGTCTTC‑TGGCCC‑CTGACGGTTGGTTT‑TGGGCTCCCGCCCCACATCGGCGCAccggt                                                                                        >  2:1211224/1‑235 (MQ=255)

                                                                                                                                                aGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGGTGCTGCTGGCGCCGGCGTTCCTCTTTTGCCCCCCGGGTAGCGGAACGACGGGCGGGCGGGTGGG‑CACCGGTAT‑CC‑GTTTCTGGTTTTTCTTCTACCGACTGGGCCACATCTTC‑CGCCCGCCTCAC‑‑TTGGGTTATGGGCTCCCCCCGGCCATCCgccacccgtt                                                                                        >  2:1375511/1‑231 (MQ=255)

                                                                                                                                                     tCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTgg                                                                                                                                                        <  1:1864481/173‑1 (MQ=255)

                                                                                                                                                              gggACTTTATCAGCTCAACATGTGGGGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTAGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGct                                                                         <  1:1749307/238‑1 (MQ=255)

                                                                                                                                                              cggcggTTTTCAGTTAAACATGGGGAGCAAAATCTCCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGct                                                                         <  1:2045790/234‑1 (MQ=255)

                                                                                                                                                              cGGAGGTTATCAGCTAACCATGTGCATCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGct                                                                         <  1:1846922/239‑1 (MQ=255)

                                                                                                                                                              cGGACTTTTTCAGCCCAACATGTGGAGCAAATTCTCCCAGCCGTTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGc                                                                          <  1:1107418/238‑1 (MQ=255)

                                                                                                                                                              cGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTCCCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGct                                                                         <  1:1967238/239‑1 (MQ=255)

                                                                                                                                                               ggACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGGTGATGCTGATGGCGCTGTCGTTCATCTTTTGCCCCCCGCGTAGCGTACCGATGGGGGGGCGGGGGGT‑CACCGGGAT‑CA‑GTTTTGGTTTTTTCTTCTTCGTACTGGGCCAGATCTTC‑GGCCCG‑CCGGCGGTTGGTTT‑TGGCATCCCCCCGGTCCACCGCCCCCCGTT‑TCCCAGCGCCCGcc                                                                         >  2:722701/1‑237 (MQ=255)

                                                                                                                                                                  cGTTATCAGCTCAACATGTGGAGCAAATTCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGcttctt                                                                     <  1:753504/239‑1 (MQ=255)

                                                                                                                                                                    ttATCAGCTCAACATGGGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGc                                                                          <  1:229944/232‑1 (MQ=255)

                                                                                                                                                                      aTCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTTGCCCACTGCGTGGCGTGCCGGTGGGGGGGGGGGTGGT‑GACCGGTAT‑CA‑GTTTTGGTTTTGTCTTCTTCGTACTGGAGCAGATCTTC‑GGCCCG‑CCGGG‑GTTGGTTTATTGGATTCCCCCCCGCATCGGCGCACCGTT‑GCCCAACGCCCGcctcttct                                                                   >  2:1702337/1‑237 (MQ=255)

                                                                                                                                                                        cAGCTCAACATGTGGAGCAAATTCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAt                                                               <  1:551491/239‑1 (MQ=255)

                                                                                                                                                                          gCTCACCATGTGGAGCAAAATCTTCCAGCCGCTATCGGTGGCGGTGATGAGGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGGGTAGCGTACCGATGGGCGTGCGTGTGGT‑CCCCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTCCTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑Ca                                                            <  1:499770/239‑1 (MQ=255)

                                                                                                                                                                           cTCAATATGTGGAGCAAAGTCTCCCAGCCGTTATCTGGGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACGGCGTAGCGTACCGAGGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTGGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑Ca                                                            <  1:881802/238‑1 (MQ=255)

                                                                                                                                                                            tCAACATGGGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGc                                                          <  1:160148/239‑1 (MQ=255)

                                                                                                                                                                              aaCTTGTGGGGCAAATTCTCCCAGCCGCTATCTGGGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCt                                                        <  1:726919/239‑1 (MQ=255)

                                                                                                                                                                              aaCATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGAAGATGCTGGTGGGGCTGTCGTTCATCTTTTGCCCCCCGCGTAGCGTACCGATGGGGGGGCGGGTGGT‑CACCGGTAT‑CC‑GTTTTGGGTTTTTCTTCTTCGTAATGGGCCAGATCTTC‑GGCCCC‑CTGGC‑GGTTGTTTTTGGCCTCCCCCCCACTACCCGCGCCCTGTT‑TCCCAAGGCCAGCTTCTTTTTTAT‑ctttc                                                         >  2:229944/1‑234 (MQ=255)

                                                                                                                                                                                cATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGgcg                                                                                               <  1:1781609/200‑1 (MQ=255)

                                                                                                                                                                                     ggAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATTGGGCTGTCCTTCCTCTTTTTCCCCCCGCGGATGGGACCGCGGGGGGGGCGGGTGGTCCACCGG‑GT‑CA‑GTTTCCGTTTTGTTTTTTTACTACTGGACCCGAACTTC‑GGCCCG‑CTTGC‑GCTGGTTTTTTGCCTCCCCCCCAACATCCGCGGCCTGTT‑TCCAAACCCCCCCTTCTTTTTTAT‑CACCCTCTGGCTg                                                 >  2:745086/1‑239 (MQ=255)

                                                                                                                                                                                        gCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGGTGGCGCCGTCGTTCATCTTTTGCCCACTGCGTAGCGTACCGATGGGCGGGGGTGTGGT‑CACCGGTAT‑CA‑GTTTTGGTTTTTTTTTCTTCGTACTGGACCAGATCTTC‑GGCCCG‑CTGGC‑GGTGGGTTTTTGCATCCCGCCGGTCCACCGCGCCCTGTTGGCCAACCG‑CAGCTTCTTCTTTAT‑CAGCCCGGGGccggtt                                              >  2:1166590/1‑234 (MQ=255)

                                                                                                                                                                                        gCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGAGGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCAGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGAACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGtt                                               <  1:1542767/238‑1 (MQ=255)

                                                                                                                                                                                        gCAAAATCTTCCAGCCGCTATCTGTGGCGGGGATGATGCTGATGGCGCTGTCGTTCCTCTTTTGCCCCCTGCGTGGCGTACCGATGGGGGGGCGTGTGGT‑CCCCGGGCT‑CC‑GTTTTGGGTTTTTTTTCTACGTACCGGGCCAGACCTTC‑GGCCCG‑CTGAC‑GTTTGGTTTTTGCCTCCCCCCCCTCATCCGCGCCCCGTT‑TCCCACCGCCCGCTTCTTCTTAAT‑CAGCCCTTGGCGGttg                                              >  2:32304/1‑238 (MQ=255)

                                                                                                                                                                                          aaaaTCTTCCAGCCGCTATCTGTGGCGGTGATGAGGCTGATGGCGCTGTCTTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTaa                                             <  1:32304/238‑1 (MQ=255)

                                                                                                                                                                                            aaTCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGGGCTGTTGTTCCTCTTTTGCCCACTGCGTAGCGGACCGATGGGGGGGCGGGTGGT‑CACCGGGTT‑CA‑GTTTTGGGTTTTTCTTTTTCGTACTGGACCCGAACTTC‑GGCCCC‑CTGGC‑GGTGGTTTTTTGGATCCCGCCGGTCATCCGCGCCCCGTT‑TCCCAGCGCCCGCCTCCTCTTTATACGCCCTGGGGCTGtttagt                                           >  2:606270/1‑235 (MQ=255)

                                                                                                                                                                                            aaTCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCCTTCCTCTTTTGCCCCCCGCGTAGCGTACCGCTGGGGGTGCGGGTGGT‑CACCGGGAT‑CA‑GTTTCGGTTTTTTTTTTTTCGTACTTGACCAGATCTTC‑GGCCCC‑CCGCC‑GTTTGTTTTTTGCCTCCCCCCGCTCATCCGCCCCCCCTT‑TCCAACCCCCACCCTCTTCTTAAT‑CAGCCCTTGGccttttttga                                          >  2:1620063/1‑230 (MQ=255)

                                                                                                                                                                                               tttCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCTCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGaa                                       <  1:1792947/238‑1 (MQ=255)

                                                                                                                                                                                                 tCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCCTCTTTGGCCCACTGCGTAGCGTACCGATGGGGGGGCGTGTGGT‑CGCCGGTGT‑CA‑CGTTCGGGTTTGTCTTTTACGTCCTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GCTGGTTTTTGGCATCCCCCCGGGCATCGGCGCACTGTT‑TCCTAGCGCCAGCTTCTTCTTTAT‑CAGCCTGCGGCTGTTTATGGGaaaa                                     >  2:197297/1‑239 (MQ=255)

                                                                                                                                                                                                     cccGCTATCTGGGGCGGGGTTGATGCTGAGGGCGCTGTCGTTCATCTTTGGCCCATTGCGTAGCGTCCCGATGGGCGTGCGTGTGGT‑CACCGTTAT‑CA‑GTTTCGTTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTACTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGt                                 <  2:612925/238‑1 (MQ=255)

                                                                                                                                                                                                            tCTGTGGCGGGGATGATGCTGATGGGGCTTTCGTTCATTTTTGGCCCCCTGCGTAGCGTTCCGATGGGCGTGCGTGTGGT‑CCCCGGTTT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGaa                          <  1:398868/239‑1 (MQ=255)

                                                                                                                                                                                                              tgtgGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATg                        <  1:1620063/239‑1 (MQ=255)

                                                                                                                                                                                                               gtgGCGGTGATGATGCTGAGGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CCCCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGAGCATCTGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGa                       <  1:471267/239‑1 (MQ=255)

                                                                                                                                                                                                                 ggCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCCCTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGCCCAGATCTTC‑GGCCCG‑CTGAC‑TTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGaa                      <  1:1879592/238‑1 (MQ=255)

                                                                                                                                                                                                                 ggCGGTGAGGATGGTGATGGGGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGaa                      <  1:926999/238‑1 (MQ=255)

                                                                                                                                                                                                                            tgCTGATGGCGCTTTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGCCCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAggg           <  1:975988/238‑1 (MQ=255)

                                                                                                                                                                                                                            tgCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAggg           <  1:1718753/238‑1 (MQ=255)

                                                                                                                                                                                                                                gATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGG‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGCC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGa      <  1:722701/239‑1 (MQ=255)

                                                                                                                                                                                                                                gATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGAAGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGtt                                                                                                                                                                          <  2:678925/80‑1 (MQ=255)

                                                                                                                                                                                                                                   ggCGCTGTCGTTCATCTTTGGCCCATTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGaaa    <  1:476890/238‑1 (MQ=255)

                                                                                                                                                                                                                                    gcgcTGTCGTTCGTCTTTGGCCCCCTGGGTAGCTTACCGATGGGCTTGCTGTTGGT‑CACCGGTAT‑CG‑TTTTCGTTTTTTTTTTCTACGTACGGGCCCAGTTCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGTCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAg   <  2:1109749/238‑1 (MQ=255)

AATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGT‑CACCGGTAT‑CA‑GTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTC‑GGCCCG‑CTGAC‑GTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTT‑GCCAAGCGCCAGCTTCTTCTTAAT‑CAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGC  >  NC_007779/4492643‑4493109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`