BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_007779	735,187	T→G	15.3%	pseudogene (618/1506 nt)	Y75_RS03635 →	RHS repeat protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007779	735,187	0	T	G	15.3%	170.2 / 6.9	102	pseudogene (618/1506 nt)	Y75_RS03635	RHS repeat protein
Reads supporting (aligned to +/- strand): ref base T (66/17); new base G (15/3); total (82/20)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 102 total aligned reads displayed.

CTGGTACGGCTGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAG  >  NC_007779/734950‑735413

cTGGTACGGCTGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGCGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCGCGACCGGCTGGAAAGTg                                                                                                                                                                                                                                    >  1:1032905/1‑239 (MQ=14)

        gCTGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGGGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑Tg                                                                                                                                                                                                                           >  1:744945/1‑239 (MQ=14)

         cTGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑Tg                                                                                                                                                                                                                           >  1:542166/1‑238 (MQ=31)

            ggACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑TGGCTg                                                                                                                                                                                                                       >  1:1351015/1‑239 (MQ=14)

             gACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAAACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGGGTG‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑TGGcgt                                                                                                                                                                                                                       >  1:2178177/1‑236 (MQ=9)

              aCGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGGGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGa                                                                                                                                                                                                                      >  1:1661363/1‑238 (MQ=14)

                        ccTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGGGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGACAGTGAAATCC‑TGGCTGACCGGgtgagtg                                                                                                                                                                                                           >  1:475157/1‑239 (MQ=14)

                                      aGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCcgccgc                                                                                                                                                                                             >  1:1333370/1‑239 (MQ=31)

                                      aGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGGGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑CGGCTGACCGGGGGAGCGGGGAAAGccgccg                                                                                                                                                                                              >  1:363493/1‑238 (MQ=9)

                                        aaCGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCgctg                                                                                                                                                                                           >  1:1868528/1‑239 (MQ=31)

                                        aaCGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGATGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGACAGGGAAATCC‑TGGCTGACCGGGCGCGTGAGGAAAGCCGCCgctg                                                                                                                                                                                           >  1:1486770/1‑239 (MQ=9)

                                          cGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑TGGCTGACCGGGGGAGTGAGGAAAGCCGCCcctggc                                                                                                                                                                                         >  2:55585/1‑239 (MQ=14)

                                             cAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGGGAGTGAGGAAAGCCGCCgctggctg                                                                                                                                                                                       >  1:1935727/1‑238 (MQ=14)

                                             cAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑CGGCTGACCGGGGGGGGGAGGAAAGCCGCCGctggccgg                                                                                                                                                                                      >  2:1904206/1‑239 (MQ=9)

                                             cAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCACCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGCGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGCGAGGGAGGCAAGCCGCCgctgggtg                                                                                                                                                                                       >  1:2085606/1‑238 (MQ=9)

                                                aaCCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATc                                                                                                                                                                                                                               >  1:1104735/1‑196 (MQ=31)

                                                aaCCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCa                                                                                                                                                                                    >  1:1023857/1‑238 (MQ=14)

                                                      cATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGGGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGCGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg                                                                                                                                                                             >  1:2137317/1‑239 (MQ=14)

                                                       aTCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGGGGTGTT‑CC‑CGC‑CGGTGCTGGGGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAggg                                                                                                                                                                                                       >  1:199030/1‑211 (MQ=14)

                                                            gACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGCGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTg                                                                                                                                                                        >  1:503700/1‑238 (MQ=14)

                                                             aCGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGGGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGCTGCTCGACCGGCTGGAAAGGGAAATCC‑TGGCTGACCGGGTGGGGGCGGAAAGCCGCCGCTGGGGGGCATCGTGTGGCCTGAc                                                                                                                                                                      >  1:1004872/1‑239 (MQ=11)

                                                                  ttATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑TGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGGGCGGCCTGACGgggg                                                                                                                                                                 >  2:2080207/1‑239 (MQ=9)

                                                                   tATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGGGGa                                                                                                                                                                >  1:388119/1‑239 (MQ=14)

                                                                    aTCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGGGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGccctggcccttat                                                                                                                                                               >  1:88926/1‑228 (MQ=9)

                                                                      cAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAgaa                                                                                                                                                             >  1:911391/1‑237 (MQ=17)

                                                                         ccGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGAGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGAt                                                                                                                                                          >  1:983337/1‑239 (MQ=17)

                                                                           ggggAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGc                                                                                                                                                        >  1:1394772/1‑239 (MQ=32)

                                                                                   tCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGGGCAGATGCAAAACCAg                                                                                                                                                >  2:2113461/1‑239 (MQ=17)

                                                                                    cACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGa                                                                                                                                               >  1:493983/1‑239 (MQ=18)

                                                                                            tcatcaGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCGGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCg                                                                                                                                       >  1:2159910/1‑239 (MQ=18)

                                                                                                   ggTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGCGAAATCC‑TGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCGGGCATCGTGCGGCCTGACGGAGGAGCAGAGGCAAAACCAGATGGACCCGGTGTac                                                                                                                                 >  1:952068/1‑238 (MQ=255)

                                                                                                     ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTacac                                                                                                                               >  2:2107948/1‑238 (MQ=33)

                                                                                                      tGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACg                                                                                                                              >  1:921424/1‑238 (MQ=33)

                                                                                                      tGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGGACACg                                                                                                                              >  2:2177972/1‑238 (MQ=18)

                                                                                                        aaaCCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGCTCCAAAACCAGAAGGACCCGGTGTACACTCCg                                                                                                                           >  1:2124901/1‑239 (MQ=16)

                                                                                                          aCCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGgc                                                                                                                         >  1:562108/1‑239 (MQ=33)

                                                                                                             gCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGcgcg                                                                                                                      >  1:1000730/1‑239 (MQ=32)

                                                                                                             gCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑TGGCTGACCGGGGGGGGGAGGAAAGCCGCCGCTGGCTGGGCTCGTGCGGCCTGACGGGGGGGCAGAAGCAAAACCAGATGGACCCGGGGGTCACGCCgggcgc                                                                                                                      >  2:1345147/1‑235 (MQ=11)

                                                                                                             gCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑TGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGcgcg                                                                                                                      >  1:2087531/1‑239 (MQ=17)

                                                                                                             gCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCATTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGGGGAGCa                                                                                                                                                             >  1:695659/1‑200 (MQ=18)

                                                                                                              ccACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGAGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGa                                                                                                                     >  1:1348604/1‑239 (MQ=17)

                                                                                                                            gCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGt                                                                                                        >  1:2249435/1‑238 (MQ=32)

                                                                                                                                      aGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGAGGCAAAACCAGATGGACCCGGGGTACACCCCGGCGCGAAAAATCCACCTGTACCACTGCGa                                                                                              >  2:176764/1‑238 (MQ=17)

                                                                                                                                      aGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGCGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGa                                                                                              >  2:825670/1‑238 (MQ=17)

                                                                                                                                                     cGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGGTGCACAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGcc                                                                               >  1:1658047/1‑238 (MQ=17)

                                                                                                                                                          aCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGGGTACACGCCGGCGCGAAAAATCCACCTGTAc                                                                                                      >  1:1961925/1‑210 (MQ=14)

                                                                                                                                                              ttCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtt                                                                     >  1:1072202/1‑239 (MQ=31)

                                                                                                                                                              ttCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGGGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtt                                                                     >  1:1026002/1‑239 (MQ=14)

                                                                                                                                                               tCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTAc                                                                                                      >  1:1603315/1‑205 (MQ=31)

                                                                                                                                                                  gcagTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGGGTACACGCCCGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCCGCCGCCGGCGCTTGTcc                                                                 >  2:1841917/1‑238 (MQ=16)

                                                                                                                                                                      tCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCAc                                                             >  1:563415/1‑239 (MQ=33)

                                                                                                                                                                      tCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCAc                                                             >  1:1434584/1‑239 (MQ=33)

                                                                                                                                                                      tCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGGACCACTGCGACCCTCGCGGCCTGCCGCTGGCGCTTGTCAGCAc                                                             >  1:1014119/1‑239 (MQ=18)

                                                                                                                                                                      tCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGCGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCa                                                                                                    >  1:375614/1‑200 (MQ=14)

                                                                                                                                                                        cggcggCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACgg                                                           >  1:2107675/1‑239 (MQ=33)

                                                                                                                                                                        cggcggCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACgg                                                           >  1:895555/1‑239 (MQ=33)

                                                                                                                                                                        cggcggCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGGCAGCACgg                                                           >  2:1424124/1‑239 (MQ=18)

                                                                                                                                                                            ggcgAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCGGGCTGGCACCGTGCGGCCTGACGGGGGAGCAGATGCAAAACCAGAGGGGCCCGGGGGACCCGCCGGCGCGAGAAATCCACCTGTACCCCCGCGAGCCTCGCGGCCTGCCGCGGGCGCTTGTCAGcccctgtg                                                        >  2:1756964/1‑231 (MQ=11)

                                                                                                                                                                                aaGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGGGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGGGGACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCGGGCGCTTGTCAGCCCGGAAGGGGCa                                                   >  2:1673888/1‑239 (MQ=255)

                                                                                                                                                                                            ggggggggtcccc‑cGC‑GGGTGGTGGGGGAGAGGCCCGACCGGCTGGAAAGGGAACTCC‑TGGCGGACCGGGGGGGGGAGAAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGt                                         <  2:1501170/227‑1 (MQ=11)

                                                                                                                                                                                              gtggtgTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCGGATGCAAAACCAGATGGACCCGGGGTACACGCCGGCGCGACAAATCCACCCGACCCACTGCGCCCATCGCGGCCTGGCCCGGGCGCTTTGCAGCACGGAACGGGCAACAGGATgggggg                                      >  2:505611/1‑234 (MQ=11)

                                                                                                                                                                                              gtggtgTACCC‑CGC‑CGGTCGTGGTGGAGAGGC‑GGGCCGGCCGGGAAGGGGAATCCGTGGGTGCCGGGGTGGGTGGGGAAAGCCGCCGCTGGCTGGCCTCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCCCTGCGACCTTCGCGGGCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTgcg                                      <  2:1283666/239‑1 (MQ=11)

                                                                                                                                                                                              ggggtgTC‑CC‑CGC‑CGGGGCTGGTGCGGATGCTCGACCGGCTGAAAAGTGAAATCC‑TGGCTGACGGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTgcg                                      <  2:493983/236‑1 (MQ=255)

                                                                                                                                                                                              gggggttcccc‑cGC‑GGGGGCGGGTGCGGATGCTCGACGGGCGGGAAGGTAAAATCC‑TGGCTGACGGGGGGGGGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTgc                                       <  2:1658047/229‑1 (MQ=11)

                                                                                                                                                                                               tgttgtC‑CC‑CGC‑GGGTTCTGGTGCAGGTGCTGAACGGGCTGGAAAGTGAAATCC‑TGTCTGCCGGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTgcgc                                     <  2:562108/235‑1 (MQ=11)

                                                                                                                                                                                               gggtgTT‑CCGCGC‑GGGTGCGTGTGCAGAGGCCCGACCGGCTGGAAAGTGAAACCG‑TGGGTGCGCGGGTGGGGGAGGAAAGCCGCCGCTGGCTGGCATCGCGCGGCCTGGCGGTGGAGCAGATGCAAAACCAGATGGACCTGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTgcg                                      <  2:2178177/237‑1 (MQ=11)

                                                                                                                                                                                               ggggttgccc‑cGC‑CGGTGCTGGTGCAGATGCTCGCCCGGCTGGAAAGTGAAATCC‑TGGCGGACCGGGTGAGTGAGGAAGGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAACCCAGATGGACCCGGTGTCCACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTgcg                                      <  1:2164138/230‑1 (MQ=11)

                                                                                                                                                                                                ggtgttgtcgcgc‑cgGTGCGGGGGCAGATGCGCGACGGGCTGGAAAGGGAAATCC‑TGGGGGACGGGGGGGGTGGGGAAAGCCGCCGCGGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTgcg                                      <  2:2169489/228‑1 (MQ=11)

                                                                                                                                                                                                 gtgtT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGAGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGGGCGCAGa                                  >  1:2015553/1‑239 (MQ=37)

                                                                                                                                                                                                 gtgtT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGGGAAATCC‑TGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCGGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGGgcgccgc                                  >  2:1216282/1‑236 (MQ=255)

                                                                                                                                                                                                   tgt‑CC‑CGCGCGGTGCGGGTGCAGTTGCTCGACGGGCGGGAAAGTAAAATCC‑TGGCGGCCCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGa                                  <  2:1000730/236‑1 (MQ=11)

                                                                                                                                                                                                    tt‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAAt                                >  1:2170344/1‑238 (MQ=37)

                                                                                                                                                                                                       cc‑cGC‑GGGTGTGGGGGCGGAGGCCGGACCGGCTGGAAAGTGAAATCC‑GGGCGGACGGGGGGGGGGGGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACg                             <  2:2249435/239‑1 (MQ=11)

                                                                                                                                                                                                       cc‑cGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAATCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACg                             <  1:1841917/239‑1 (MQ=37)

                                                                                                                                                                                                       cc‑cGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGCGCGCAGAATACg                             >  1:1813710/1‑239 (MQ=37)

                                                                                                                                                                                                        c‑cgc‑cgGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGAGCGCAGAATACGa                            >  1:567884/1‑239 (MQ=37)

                                                                                                                                                                                                           gc‑cgGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGc                                                                                                                                                              >  1:592781/1‑107 (MQ=32)

                                                                                                                                                                                                           gc‑cgGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCACCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGc                                                                                                                                                              <  2:592781/107‑1 (MQ=17)

                                                                                                                                                                                                           gc‑cgGTGCTCGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGACATCGCGCGGCCTGACGGTGGAGCAGATGCAAAACAAGATGGACCCGGTGGACACGCCCGCGCGAAAAATCCACCTGTACACCTGCCACCATCGCGGCCCGCCGCTGGCGCTTGCCAGCCCGGACGGGGCAACAGCAGGGGGCCCAGAATACGCTg                          >  2:433205/1‑239 (MQ=11)

                                                                                                                                                                                                                 tggtGGGGCAGAGGCGCGACGGGCTGGAAAGTGAAATCC‑GGGCTGACGGGGTGAGTGAGAAAAGCCGCCGCTGGCTGGCATCGTGCGGCCGGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCCCTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATg                      <  2:1443010/235‑1 (MQ=11)

                                                                                                                                                                                                                 tGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGAc                                                                                                                                          >  1:669139/1‑122 (MQ=32)

                                                                                                                                                                                                                 tGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGAAGAATgg                     >  1:984427/1‑239 (MQ=37)

                                                                                                                                                                                                                 tGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCAGCCTGACGGTGGAGCAGATGCAAAACCAGATGGAc                                                                                                                                          <  2:669139/122‑1 (MQ=17)

                                                                                                                                                                                                                 tGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGGGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATgg                     >  1:1086066/1‑239 (MQ=37)

                                                                                                                                                                                                                      gTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGAGCGGGCGCGTGAGGAAAGCCGCAGCTGGCTGGCATCGTGCGGACGGAACGGGGGGCAGATGCAAAACCAGAGGGACCCGGGGGAAACGCCGGCGCGGAAAATCCACCTCTAACACTGCGACCATCGACGGCTGGGGCGGGCGGTTGTCCAGACGGGAGGGGCAAAAGAATTGTGGGCAGGAAAAGATGAATGGGGCaa                >  2:1250805/1‑239 (MQ=2)

                                                                                                                                                                                                                        gCAGATGCCCGACGGGCGGGAAAGTGAATCCC‑GGGTGGACGGGGTGGGGGAGGAAGGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAAc               <  2:1072202/238‑1 (MQ=11)

                                                                                                                                                                                                                           ggtgctgagccGGCTGGAAAGTGAAATCC‑TGGCTGACGGGGTGGGGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACctg            <  2:1026002/229‑1 (MQ=255)

                                                                                                                                                                                                                           gATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATg                                           >  1:870103/1‑207 (MQ=37)

                                                                                                                                                                                                                           gATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACct             >  1:8210/1‑237 (MQ=37)

                                                                                                                                                                                                                            aTGTTCGACCGCCTGAAAAGTGAAACCC‑GGGCGGCCGGGGGGAGGGGGGAAGGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTCCACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACctgc           <  2:388119/238‑1 (MQ=11)

                                                                                                                                                                                                                            aTGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACct             >  1:250331/1‑236 (MQ=37)

                                                                                                                                                                                                                            aTGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACct             >  1:1890154/1‑236 (MQ=37)

                                                                                                                                                                                                                               cccGACCGGCTGAAAAGTGAAATCC‑GGGCTGACGGGGTGAGGGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCtgaa       <  2:1394772/237‑1 (MQ=255)

                                                                                                                                                                                                                                 cGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGa                            >  1:2043307/1‑216 (MQ=38)

                                                                                                                                                                                                                                 cGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAAAGGGGCAACCTGGtgactg     >  2:437648/1‑239 (MQ=255)

                                                                                                                                                                                                                                 cGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGCACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCCGCACGGAAGGGGCAAAAGAATGGTGCGTAGCATACGATGAATGGGGCAACCTGCcgaatg     >  2:453766/1‑239 (MQ=255)

                                                                                                                                                                                                                                    gcGGCTGGAAAGTGAAACCC‑GGGCGGCGCGGGTGGGGGAGGAAGCCCCGCGCTGGCTGGCCGCGTGCGGCCTGACGGTGGACCAGATGCAAAACCAGATGGACCCGGTGTCCAGGCCGGCGCGAAAAATCCCCCTGAACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCtgaatgaa   <  2:1059303/237‑1 (MQ=11)

                                                                                                                                                                                                                                    ccGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCCACCTGGTGAATGAag  >  2:1985028/1‑239 (MQ=37)

                                                                                                                                                                                                                                       gCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACctgct          >  1:1028083/1‑228 (MQ=37)

                                                                                                                                                                                                                                       gCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACctgct          <  2:1028083/228‑1 (MQ=37)

CTGGTACGGCTGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTT‑CC‑CGC‑CGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCC‑TGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAG  >  NC_007779/734950‑735413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`