| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 812,160 | T→C | 14.9% | S73P (TCG→CCG) | bioC → | malonyl‑ACP O‑methyltransferase BioC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007779 | 812,160 | 0 | T | C | 14.9% | 147.0 / 2.2 | 66 | S73P (TCG→CCG) | bioC | malonyl‑ACP O‑methyltransferase BioC |
| Reads supporting (aligned to +/- strand): ref base T (21/33); new base C (9/2); total (30/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.74e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
CCGTCTGCTGGAGGTGCTGCATGGCAAC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGCATCAGGC > NC_007779/811924‑812398 | ccGTCTGCTGGAGGTGCTGCATGGCAAC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTcg < 1:844616/239‑1 (MQ=255)ccGTCGGCGGGGGGTGGGGCAGGGCAAG‑GTTAAATAAACAGGCCATGGCAGCGGCATTTGGTGGGGAAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACCCCCACGTACTGGACGCGGGTTGTGGACCGGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTcg < 2:1271639/239‑1 (MQ=255) tgctgGAGGTGCTGCATGGCAAC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGGCCTGGCTGGATGAGCCGCCACTGGCGGGAAAGTCCCGCGCCGGGGGGGGGCCTAGATTTCCcgcccc > 1:48271/1‑236 (MQ=255) tgcggGAGGTGCTGCATGGCACC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTGCTGGACGCGGGTTGTGGACTTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCgccgcc < 1:1999148/239‑1 (MQ=255) agttgttgcATGGCAAC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGc < 1:1874624/232‑1 (MQ=255) gggctgcATGGCAAC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCAACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGGACGGCGCGGGCGAGGGGCGGACGTAGATCTCCCGCCCCCacaggatg > 1:704383/3‑232 (MQ=255) gTGCTGCATGGCAAC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGGAGGGGACGGACTTATATGTCTCgccgccgctacttg > 1:579650/1‑231 (MQ=255) tgctgcATGGCAAC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCCCCGCCAGGGGACGGGCTTAGATCTCTCGCCGCCAATGCTTGt > 1:1398035/1‑239 (MQ=255) aTGGCAAC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAgg < 1:301445/238‑1 (MQ=255) aggCAACGGGTAAAAAAAAAACCCATTGCAGCGGCATTTGGTCGGGCGGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACGGGCAATGCTTCCACAGCGTAAATACCCCCACGTACGGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAgg < 2:1027919/237‑1 (MQ=255) cAAC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGGCCCGCGCAGGGGACGGCCCTAGAACTCCCGCCGCCACTGCGTGTTCAGGCACg > 1:1389664/1‑238 (MQ=255) gTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGGAGCGCACGCGCAGGGGGGGGGCTTAGATGTCTCCCCGCCCATGCTTGTTTAGGCCCCCCCGaa > 1:1719339/1‑239 (MQ=255) aaGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCGGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCa < 1:366970/239‑1 (MQ=255) aGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGGCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCCAATCTTGTTCAGGCACGCCCGGAGGATGCCGCAg > 1:102161/1‑239 (MQ=255) aGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGCCCCGCGCCAGGGGCCGCCTTCGATCTCCCCCCCCCCCAGCTTCTTCAGGCACGCCCCAAAGAAGCCGCAg > 2:1895678/1‑239 (MQ=255) ccATTGCAGCGGCATTTGGGCGGGCACCCGCACACTATGAGTAACATGCAGATCTACAGCGCCAGAGTGCGGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACGGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGa < 2:1050862/238‑1 (MQ=255) cTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGc < 1:1139327/201‑1 (MQ=255) tATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTCCTGGCAATGCTTCCACTGCGTAAATACGCCCGCGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGTAGGATGCCg < 1:924137/199‑1 (MQ=255) agggagaAACAGGCGGATCTACAGCGCCAGGTTGCTGAGCCCTTTGTGGAAATGCTCCCCCGGCGTAAACCCACCCACGTCCTGGACGGGGTTTGGGGCCTGGGCTGGTGGGCCCGCCCCTGGCGGGAACGTCGCGCGCGGGTGCCGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCAGCCCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑Gtt < 2:704383/236‑1 (MQ=255) aCATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGGCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCACTGCTTGTTCAGGCACGCCCGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTTGCGGCt > 1:744282/1‑238 (MQ=255) aTGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACCGCACGCGCCGGTGACGGCCTTAGATCTCTCCCCCCCCAGGCTTTTTCAGGCACGCCCCAAGGAGGGCGCAGACCCCTTTCTGGGGGGGGGAGTGCGAATCCCTCCC‑GTTGCCGAcccc > 2:1781975/1‑236 (MQ=255) aTGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAAGTCACGCGCGGGGGGGGGGCCTTGAGCTCTCGCCGCCCATGCTTGTTCAGGCACGCCAGAAAGATGCCGCACAcccatt > 2:924137/1‑195 (MQ=255) tGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATCCACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGgag < 1:515837/209‑1 (MQ=255) gCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGGACGGCACCCGCCGGGGGCCGCCCTAGATCTCCCCCCCCCCATGCCTGTTTCGGCACGCCCGGAGGATGGCGCAGACCACTATTC‑TGCGGGGGGAATCGAAAACCCGCC‑CTTacgcgccgccg > 2:481001/1‑228 (MQ=255) cAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGGCACGCGCCGGGGACGGCCTTAGATCTCCCCCCCCCCCTGCTTTTTCATGCCCGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGGGATATAGaaac > 2:515837/1‑207 (MQ=255) ccAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAAGGCACGCGCAGGGGGCGGCCCTAGATCTCCCCCCGCCCATGCGTGTTCAGGCACGCCCGAAGGAGGCCGCCGAACCATATTT‑GGGGGGGGGAATCGAAACCCCCCCGGTTGCCGCCGGCGACGTGTGATCTTgat > 2:250684/1‑237 (MQ=255) gtggcggcGCTTTACTGGAAGTGCTCCCACAGCATAAACCCCCCACCGTCCTGGACGGGGGTTGGGGCCGGGGGGGGAGGGGCCGCCACTGGCGGGACCGTCACGCGCGGGTGACGGCTTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAg < 2:1807273/231‑1 (MQ=255) cTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCCCAGACCATTATCT‑GGCGGGAGATATCGAAACCCTGCC‑GCTAGCGACTGCGACGTTCGCTCTTGCA‑TGGGGCaa > 1:615355/1‑238 (MQ=255) cTGACGCCTTACTGGCAATGCTTCCACAGCGTAAACACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCCGGGGACGGCCCTAGATCTCCCCCCCCCCACGCTTGTTTAGGCACGCCAGAAGGGTGGCGCAGACCACTATCT‑GGCGGGGGATATCGAAACCCCCCC‑GGTAGCGACTGCGACCTTCGATCTTGCA‑Tgggggaa > 2:628570/1‑233 (MQ=255) cttcagcaGCGAAAATACCCCCACGTACGGGACGCGGGTTGGGGACCTGGCTGGAGGAGCCGCCACTGGCGGGAACGTCACGCGCGGGTGACGGCCTGAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGAGGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCg < 1:661149/232‑1 (MQ=255) ttCCGCAGCGTAAATCCCCCCCGGTATGGGGCGGGGGTTGGGGACAGGGCTGGATGGGCCGCCTCTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGGTCAGGCGCGCCAGAAGGATGCCGCAGGCCATTATCT‑GGCGGGAGATATCTAATCCCTGCC‑GTTAGCGACTGCg < 1:61925/194‑1 (MQ=255) ttCCCCAGGTTAAATCCCCCCACGTACTGGACGGGGGTTGTGGACCTGGCGGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑Cgcagtg < 1:1467528/227‑1 (MQ=255) ttCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGgag < 1:1039245/165‑1 (MQ=255) cGTAAATACCCCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGAGGAGCCGCCCCTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑Cg < 1:1580750/214‑1 (MQ=255) tAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCa < 1:517294/136‑1 (MQ=255) tAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAAGTCACGCGCAGGGGACGGGCCTAGATCCCTCGCCGCCCATGCCTGTTTAGGCACGCCCGAAGGGAGGCGCAGACCATTATCT‑GGCGGGGGATATCGAATCCCCGCC‑CTTAGCGACACCGACGTTCGATCTTGCT‑TGGAGCAAACC‑CGCCGTGCCGTGGGGCggggaattgtac > 2:127623/1‑228 (MQ=255) ccccccGCGTTCGGGGCGCGGGTGGTGGCCCGGGCTGGATGAGCCCCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCa < 1:30260/236‑1 (MQ=255) cacCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAAGTCACGCGCCGGGGACGGGCCTAAATCTCTCCCCGCCCAAGCTTGTTCAGGCCCGCCCGAAGGGCGGCCCCGACCCTTATCT‑GGCGGGGGAGATTGAAACCCTCCC‑GTTAGGCGCCGCGACGTTCCGTCTTGCATTGGGGAAATC‑‑CCCAGTGCAGGGGGGCGGGAATTTATCCACCGcc > 2:417163/1‑237 (MQ=255) cccACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCCAGCGCGGGGGACGGGCTTTTGTCCCCCCCCCCCCACGCTTGTTCCCGCACGCCCGAAAGAATCCCCAGACCCATTTCT‑GGCGGGGGGTATCGCAAACCCGCC‑GTTAGCGCCCGCGACACTTGATCTTGTC‑TGGGTCAACCT‑CCCCCCGCAGTGGGTCGGGAGTTTATcaccccgcac > 2:1985487/1‑229 (MQ=255) cGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGGACCGCCCCCGCAGGTGACGGCCCTAGATCTCTCCCCGCCCATGCTTGTTCAGGCACGCCCGAAGGATGCCGCCGACCATTTTCT‑GGCGGGGGGTATCGAAACCCCGCC‑GTTAGCGGCAGCGACCTTCGATCTTGCC‑AGGTGCACACTCCCCAGT‑CCGTGGTGCGGGGATTTTTCCCCCGCCCTcccc > 2:634183/1‑236 (MQ=255) cGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAAAGGCACGCGCAGGGGGGGGCCTTAGATCTCTCGCCGCCCCTGCTTGTTCAGGCACGCCAGAAGGAAGCCGCAGACCCTTATCT‑GGCGGGGGGAATCGAAACCCCGCC‑GCTAGGGGCTGCGACGGTCGATCTTTCA‑TGGGGGAATCC‑CCCAGGGGTGGGGGGGGGGTATTTTTTCACGGCAcccccc > 2:30260/1‑236 (MQ=255) gcgtGGCCGGGGGTTGTGGCCCGGGCGGGATGGGCCGCCACTGGCGGGAACGCCACGGGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGa < 1:1352361/235‑1 (MQ=255) gACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGGCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCCGAAGGATGCCGCAGACCATTATCT‑GGCGGGGGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGGTCGATCTTGCa > 1:1286954/1‑180 (MQ=255) gggcctgggctggATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGgtggtg < 1:120515/231‑1 (MQ=255) ggacccgggctggATGAGCCGCCAATGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGAC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGgtggtg < 1:1985487/231‑1 (MQ=255) gcccgggctggATGGCCCGCCACTGGCGGGAACGTCCCGCGCGGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTgcg < 1:250684/233‑1 (MQ=255) tggctggATGAGCCGCCACTGGCGGGAACGGCACGCGCAGGGGACGGCCCTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGAAATCGAAACCCTGCC‑GTTAGCGACCGCGACGTTCGATCTTGCA‑TGGAGCCAta > 1:325829/1‑172 (MQ=255) cACGGGCGGGACCGTCACCCGCAGGGGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAAGCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGcagtgcagtg < 1:1991116/170‑1 (MQ=255) gggcggcAGCGCCCCGCGAAGGTGCCGGCTTTAGATCCCTCCCCGCAAATGCTTGTTCAGGCACGCCAGAAGGATGCCGAAGACCTTTATCT‑GGCGGGAGATATCGACTCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAAGTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTAc < 2:1660075/238‑1 (MQ=255) ggcaCGTCACGCGCGGGGGCCGGCTTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACg < 1:1006867/235‑1 (MQ=255) ggAACGTCCGGCGCAGGTGACGGCCTTAGATCTCTCGCCGCAAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACg < 1:1406162/238‑1 (MQ=255) ggAACGTCACGCGCAGGTGCCGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAAATATCAAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCTCCCCAAAGGCGTGGTCGCGTTTACCACg < 1:193440/238‑1 (MQ=255) aagagccgcggcgcGGGTGACGGCTTTAGATCCCCCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGc < 2:505043/229‑1 (MQ=255) cACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCTATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCa > 2:638226/1‑239 (MQ=255) cACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCa > 1:1689857/1‑239 (MQ=255) cgcgCAGGTGCCGGCCTTAGTCCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGCCCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAgg < 1:1937707/239‑1 (MQ=255) ggcAGGTGGGGTCCTAAGTCCTCCCGCCGCCAATGCTTGTTCGGGCGCGCGAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGACTCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAggg < 2:1398035/237‑1 (MQ=255) gTGCCGGCTTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCAGCCCATTTTCT‑GGCGGGAGATATCGAGTCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGt < 1:477605/238‑1 (MQ=255) gTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAg < 1:614032/177‑1 (MQ=255) gTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTCCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAg > 2:614032/1‑177 (MQ=255) agggCTTTAGATCCCGCGCCGCCAATGCTTGTCCAGGCACCCCAGAGGGATGCCGCAGACCATTATCT‑GGGGGGAGATACCGAACCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTAc < 2:744282/236‑1 (MQ=255) aCGGCCTAAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTCATTTATCCACGCCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATAGTTAc > 1:135599/1‑238 (MQ=255) cGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAggg > 1:505043/1‑229 (MQ=255) tttagctccttcGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCGGCAGCCCATTATCT‑GGGGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGaa < 1:1781975/228‑1 (MQ=255) tAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATc > 2:1755872/1‑226 (MQ=255) tAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATc < 1:1755872/226‑1 (MQ=255) tAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACt > 2:1566625/1‑238 (MQ=255) tctctgCCCGCCAATGCTTGTTCAGGCCCGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGCAt < 1:780585/238‑1 (MQ=255) ctcGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTg > 1:1633794/1‑89 (MQ=255) ctcGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGCa > 1:413902/1‑234 (MQ=255) ctcGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGCATCAgg > 2:903896/1‑239 (MQ=255) ctcGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGCATCAg > 1:2135470/1‑238 (MQ=255) ctcGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGCATCAg > 1:683149/1‑238 (MQ=255) ctcGCCGCAAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTg < 2:1633794/89‑1 (MQ=255) tcGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAg > 2:1329343/1‑159 (MQ=255) tcGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAg < 1:1329343/159‑1 (MQ=255) tcGCCGCAAATGTTTGTTCAGGCGCGCCAGAAGGATGCGGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGCATCAGGc < 1:1325502/239‑1 (MQ=255) | CCGTCTGCTGGAGGTGCTGCATGGCAAC‑GGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCT‑GGCGGGAGATATCGAATCCCTGCC‑GTTAGCGACTGCGACGTTCGATCTTGCA‑TGGAGCAATCT‑CGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGCATCAGGC > NC_007779/811924‑812398 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |